FF:10047-101G2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004996 | ||
|accession_numbers=CAGE;DRX008752;DRR009624;DRZ001049;DRZ002434;DRZ012399;DRZ013784 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0002372,UBERON:0006562,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0000344,UBERON:0004121,UBERON:0000064,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004923,UBERON:0004921,UBERON:0000161,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0001961,UBERON:0001744,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0002465,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0000166,UBERON:0001042,UBERON:0002193,UBERON:0002405,UBERON:0001735 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010047 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10047-101G2 | |id=FF:10047-101G2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010047 | ||
|is_obsolete= | |||
|library_id=CNhs10654 | |||
|library_id_phase_based=2:CNhs10654 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10047 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10047 | |||
|name=tonsil, adult, pool1 | |name=tonsil, adult, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10654,LSID658,release008,COMPLETED | |profile_hcage=CNhs10654,LSID658,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:636587 | |rna_catalog_number=Cat:636587 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.76143504667881e-211!GO:0005737;cytoplasm;6.09684910613625e-179!GO:0043226;organelle;1.36424605887892e-148!GO:0043229;intracellular organelle;3.52549298782361e-148!GO:0043227;membrane-bound organelle;2.26863155248375e-130!GO:0043231;intracellular membrane-bound organelle;3.66245094296137e-130!GO:0005515;protein binding;1.63620312568329e-110!GO:0044444;cytoplasmic part;1.38635227308158e-107!GO:0044422;organelle part;9.78733577710703e-99!GO:0044446;intracellular organelle part;7.96243348165019e-97!GO:0032991;macromolecular complex;5.99360256376112e-72!GO:0043170;macromolecule metabolic process;4.86413417783841e-55!GO:0044237;cellular metabolic process;5.40018273890182e-55!GO:0044238;primary metabolic process;1.35983267684399e-54!GO:0030529;ribonucleoprotein complex;6.06478659272124e-52!GO:0005634;nucleus;4.45103330999589e-51!GO:0044428;nuclear part;1.19978170594245e-49!GO:0003723;RNA binding;2.28892060608099e-49!GO:0043233;organelle lumen;2.68038235797402e-45!GO:0031974;membrane-enclosed lumen;2.68038235797402e-45!GO:0019538;protein metabolic process;1.71723144166939e-44!GO:0016043;cellular component organization and biogenesis;3.926007563876e-41!GO:0033036;macromolecule localization;5.64150088874316e-40!GO:0043234;protein complex;8.47921811833686e-40!GO:0044260;cellular macromolecule metabolic process;2.7974280779239e-39!GO:0044267;cellular protein metabolic process;1.16049857613182e-38!GO:0015031;protein transport;3.57196303833343e-38!GO:0045184;establishment of protein localization;1.83886854986362e-37!GO:0008104;protein localization;2.62583045081329e-37!GO:0031090;organelle membrane;6.46670189157265e-36!GO:0006412;translation;1.33685767286355e-35!GO:0005739;mitochondrion;2.04995334919588e-34!GO:0005829;cytosol;5.4873734793102e-33!GO:0043228;non-membrane-bound organelle;8.58855692340077e-33!GO:0043232;intracellular non-membrane-bound organelle;8.58855692340077e-33!GO:0043283;biopolymer metabolic process;2.0165527849184e-31!GO:0016071;mRNA metabolic process;2.0472070371919e-30!GO:0005840;ribosome;2.71851760572376e-30!GO:0031981;nuclear lumen;2.84359129318361e-30!GO:0006396;RNA processing;5.10207395615621e-30!GO:0065003;macromolecular complex assembly;2.23558231328363e-29!GO:0031967;organelle envelope;2.54842848225419e-28!GO:0022607;cellular component assembly;4.06542061039175e-28!GO:0031975;envelope;4.54457964805388e-28!GO:0046907;intracellular transport;1.51835390134548e-27!GO:0009059;macromolecule biosynthetic process;1.89946935257138e-27!GO:0008380;RNA splicing;1.31511634189168e-26!GO:0003735;structural constituent of ribosome;2.22054574015952e-26!GO:0006886;intracellular protein transport;2.33455337232286e-26!GO:0044429;mitochondrial part;7.22827309764052e-26!GO:0006397;mRNA processing;3.66163959074987e-25!GO:0006996;organelle organization and biogenesis;3.54744456449569e-24!GO:0033279;ribosomal subunit;5.64389861455162e-24!GO:0009058;biosynthetic process;1.85233802857076e-23!GO:0010467;gene expression;1.90416556683601e-23!GO:0006915;apoptosis;6.85192112980873e-22!GO:0012501;programmed cell death;9.90680772809335e-22!GO:0044249;cellular biosynthetic process;2.40144161041701e-21!GO:0008134;transcription factor binding;7.83487050101433e-21!GO:0005654;nucleoplasm;2.24214656280687e-20!GO:0048770;pigment granule;2.52798918005309e-20!GO:0042470;melanosome;2.52798918005309e-20!GO:0051641;cellular localization;3.25536101189646e-20!GO:0008219;cell death;3.41479328135576e-20!GO:0016265;death;3.41479328135576e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.09520539574043e-20!GO:0051649;establishment of cellular localization;4.71593782562426e-20!GO:0005681;spliceosome;1.57011894916367e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.64762668710336e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.38856352960995e-18!GO:0044445;cytosolic part;1.93407057128354e-18!GO:0000166;nucleotide binding;9.02020444493761e-18!GO:0005740;mitochondrial envelope;1.74754134036591e-17!GO:0019866;organelle inner membrane;1.74754134036591e-17!GO:0005783;endoplasmic reticulum;4.83255420732525e-17!GO:0031966;mitochondrial membrane;8.7206007926206e-17!GO:0044265;cellular macromolecule catabolic process;1.78794464369853e-16!GO:0044451;nucleoplasm part;2.29668217841315e-16!GO:0006119;oxidative phosphorylation;2.81839257904087e-16!GO:0005743;mitochondrial inner membrane;6.71462035507972e-16!GO:0012505;endomembrane system;8.75164888794787e-16!GO:0006259;DNA metabolic process;9.1507471783144e-16!GO:0043412;biopolymer modification;9.74855775113845e-16!GO:0042981;regulation of apoptosis;1.0821288060697e-14!GO:0006464;protein modification process;1.34704436716041e-14!GO:0043067;regulation of programmed cell death;3.53856656875432e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;3.98520498000453e-14!GO:0015935;small ribosomal subunit;5.58405834865969e-14!GO:0006511;ubiquitin-dependent protein catabolic process;6.11977286935165e-14!GO:0019941;modification-dependent protein catabolic process;6.95947184725768e-14!GO:0043632;modification-dependent macromolecule catabolic process;6.95947184725768e-14!GO:0043687;post-translational protein modification;7.37969863608458e-14!GO:0048523;negative regulation of cellular process;9.28749146626489e-14!GO:0044257;cellular protein catabolic process;1.39135671054901e-13!GO:0006512;ubiquitin cycle;1.4270000335256e-13!GO:0022618;protein-RNA complex assembly;2.34702490935489e-13!GO:0032553;ribonucleotide binding;2.58769520232765e-13!GO:0032555;purine ribonucleotide binding;2.58769520232765e-13!GO:0006366;transcription from RNA polymerase II promoter;3.09153120527254e-13!GO:0016462;pyrophosphatase activity;3.17233780468271e-13!GO:0005794;Golgi apparatus;3.32695216597701e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.60884436910325e-13!GO:0017076;purine nucleotide binding;4.07347354643988e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;4.54969314563205e-13!GO:0017111;nucleoside-triphosphatase activity;4.58741254597793e-13!GO:0016874;ligase activity;4.96836415458603e-13!GO:0016192;vesicle-mediated transport;7.95513185529548e-13!GO:0043285;biopolymer catabolic process;8.63630594087468e-13!GO:0006913;nucleocytoplasmic transport;1.07426228905605e-12!GO:0003712;transcription cofactor activity;1.24866156165393e-12!GO:0006605;protein targeting;1.34335769057138e-12!GO:0009057;macromolecule catabolic process;1.49866783859301e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.99589556907106e-12!GO:0048519;negative regulation of biological process;2.18338278572621e-12!GO:0051169;nuclear transport;2.78482591332043e-12!GO:0044248;cellular catabolic process;3.12026438339447e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.49036512800173e-12!GO:0048193;Golgi vesicle transport;9.33010588101915e-12!GO:0016604;nuclear body;1.46070108090267e-11!GO:0006461;protein complex assembly;1.47433860610858e-11!GO:0005635;nuclear envelope;1.49241906342656e-11!GO:0005746;mitochondrial respiratory chain;1.6770964833219e-11!GO:0044455;mitochondrial membrane part;2.29112683541368e-11!GO:0050789;regulation of biological process;2.38084120169608e-11!GO:0050794;regulation of cellular process;2.48720753127088e-11!GO:0031980;mitochondrial lumen;3.90561309701947e-11!GO:0005759;mitochondrial matrix;3.90561309701947e-11!GO:0007049;cell cycle;3.94274789799522e-11!GO:0008092;cytoskeletal protein binding;4.0313908254474e-11!GO:0015934;large ribosomal subunit;4.74638945451156e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.0070360312319e-11!GO:0044432;endoplasmic reticulum part;7.14895993627309e-11!GO:0030163;protein catabolic process;7.14895993627309e-11!GO:0006457;protein folding;1.12170375728571e-10!GO:0050136;NADH dehydrogenase (quinone) activity;1.3529259015258e-10!GO:0003954;NADH dehydrogenase activity;1.3529259015258e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.3529259015258e-10!GO:0008135;translation factor activity, nucleic acid binding;1.35550317191844e-10!GO:0005730;nucleolus;1.62296294711598e-10!GO:0051246;regulation of protein metabolic process;3.12858607253866e-10!GO:0031965;nuclear membrane;3.25608198538523e-10!GO:0003676;nucleic acid binding;4.12880321398792e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;4.5398403634456e-10!GO:0000375;RNA splicing, via transesterification reactions;4.5398403634456e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.5398403634456e-10!GO:0005524;ATP binding;5.37171723479611e-10!GO:0016070;RNA metabolic process;5.37662299161024e-10!GO:0006793;phosphorus metabolic process;8.25157572786974e-10!GO:0006796;phosphate metabolic process;8.25157572786974e-10!GO:0032559;adenyl ribonucleotide binding;1.31627488267828e-09!GO:0030036;actin cytoskeleton organization and biogenesis;1.56146010503141e-09!GO:0016607;nuclear speck;1.82288530997818e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.91029139162545e-09!GO:0030554;adenyl nucleotide binding;2.40574673589291e-09!GO:0006916;anti-apoptosis;2.58167927270565e-09!GO:0019899;enzyme binding;3.13572938950518e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.35480002996212e-09!GO:0043069;negative regulation of programmed cell death;3.44497748833337e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.80649805295411e-09!GO:0043066;negative regulation of apoptosis;4.16938723177035e-09!GO:0007243;protein kinase cascade;5.56865295476749e-09!GO:0042775;organelle ATP synthesis coupled electron transport;5.64817618611074e-09!GO:0042773;ATP synthesis coupled electron transport;5.64817618611074e-09!GO:0008565;protein transporter activity;5.73082580449016e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.66470415428676e-09!GO:0007264;small GTPase mediated signal transduction;7.16649267405574e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.21911948296774e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;8.0526298930643e-09!GO:0006446;regulation of translational initiation;8.32421814326247e-09!GO:0030964;NADH dehydrogenase complex (quinone);8.32421814326247e-09!GO:0045271;respiratory chain complex I;8.32421814326247e-09!GO:0005747;mitochondrial respiratory chain complex I;8.32421814326247e-09!GO:0017038;protein import;8.32421814326247e-09!GO:0048522;positive regulation of cellular process;9.60458225850506e-09!GO:0016564;transcription repressor activity;1.01472477793465e-08!GO:0030029;actin filament-based process;1.07797089090692e-08!GO:0016310;phosphorylation;1.07797089090692e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.62721078939157e-08!GO:0006950;response to stress;1.73435311144896e-08!GO:0005768;endosome;1.98475666559907e-08!GO:0031982;vesicle;2.72135650112935e-08!GO:0008639;small protein conjugating enzyme activity;2.74463208923827e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.76921683307662e-08!GO:0048518;positive regulation of biological process;2.8363620004852e-08!GO:0019829;cation-transporting ATPase activity;2.89961306392074e-08!GO:0005793;ER-Golgi intermediate compartment;2.89998579348579e-08!GO:0031324;negative regulation of cellular metabolic process;2.91998908508212e-08!GO:0006413;translational initiation;3.04871127129106e-08!GO:0003743;translation initiation factor activity;3.1014045501812e-08!GO:0044453;nuclear membrane part;3.12610236354666e-08!GO:0005789;endoplasmic reticulum membrane;3.18172208365571e-08!GO:0006323;DNA packaging;3.41451807492611e-08!GO:0051276;chromosome organization and biogenesis;3.43684462477952e-08!GO:0004842;ubiquitin-protein ligase activity;3.64677697233861e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.89074348595049e-08!GO:0031988;membrane-bound vesicle;4.29900405731465e-08!GO:0051186;cofactor metabolic process;4.6559891030214e-08!GO:0022402;cell cycle process;7.21449144498079e-08!GO:0019787;small conjugating protein ligase activity;8.72873307870542e-08!GO:0031410;cytoplasmic vesicle;1.08361504660399e-07!GO:0016481;negative regulation of transcription;1.14350502251588e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.1508830420764e-07!GO:0042802;identical protein binding;1.15659842253713e-07!GO:0051082;unfolded protein binding;1.31927525792264e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.39608966072791e-07!GO:0005773;vacuole;1.51823720165659e-07!GO:0051170;nuclear import;1.56768794840113e-07!GO:0065007;biological regulation;1.7338586306215e-07!GO:0009892;negative regulation of metabolic process;1.77181449345145e-07!GO:0006606;protein import into nucleus;1.85504308112208e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.22249790796877e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.38210519359822e-07!GO:0002376;immune system process;2.54839384010509e-07!GO:0005761;mitochondrial ribosome;2.57026853308961e-07!GO:0000313;organellar ribosome;2.57026853308961e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.62787901142171e-07!GO:0007242;intracellular signaling cascade;2.64554221759064e-07!GO:0003713;transcription coactivator activity;2.80695248434729e-07!GO:0000785;chromatin;3.04726665408143e-07!GO:0009056;catabolic process;3.09809871846509e-07!GO:0005643;nuclear pore;3.5796708545852e-07!GO:0000074;regulation of progression through cell cycle;3.71148720145601e-07!GO:0051726;regulation of cell cycle;3.76047928367408e-07!GO:0000323;lytic vacuole;5.18639408064536e-07!GO:0005764;lysosome;5.18639408064536e-07!GO:0003924;GTPase activity;5.25854268735197e-07!GO:0009259;ribonucleotide metabolic process;5.7497361262353e-07!GO:0006333;chromatin assembly or disassembly;5.98625875811265e-07!GO:0042623;ATPase activity, coupled;6.95522843138783e-07!GO:0003779;actin binding;9.4637330416219e-07!GO:0006974;response to DNA damage stimulus;9.71055476960024e-07!GO:0005525;GTP binding;9.80485304659242e-07!GO:0016887;ATPase activity;9.8239096014925e-07!GO:0007265;Ras protein signal transduction;9.96806119266509e-07!GO:0005694;chromosome;1.00849451976436e-06!GO:0016563;transcription activator activity;1.07769660976189e-06!GO:0009060;aerobic respiration;1.15791613230111e-06!GO:0015986;ATP synthesis coupled proton transport;1.15954896292142e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.15954896292142e-06!GO:0006163;purine nucleotide metabolic process;1.26499874688598e-06!GO:0009150;purine ribonucleotide metabolic process;1.43585418799838e-06!GO:0030120;vesicle coat;1.55659833220237e-06!GO:0030662;coated vesicle membrane;1.55659833220237e-06!GO:0048475;coated membrane;1.55659833220237e-06!GO:0030117;membrane coat;1.55659833220237e-06!GO:0042254;ribosome biogenesis and assembly;1.73139108872062e-06!GO:0015629;actin cytoskeleton;1.73613001577833e-06!GO:0050657;nucleic acid transport;1.80794802352214e-06!GO:0051236;establishment of RNA localization;1.80794802352214e-06!GO:0050658;RNA transport;1.80794802352214e-06!GO:0006732;coenzyme metabolic process;1.83820121857332e-06!GO:0009055;electron carrier activity;1.95504122877128e-06!GO:0006403;RNA localization;1.97264907307161e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.32182352895605e-06!GO:0045333;cellular respiration;2.49683983410896e-06!GO:0044427;chromosomal part;2.51964763855399e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.78752104526218e-06!GO:0005839;proteasome core complex (sensu Eukaryota);3.28808902939651e-06!GO:0005770;late endosome;3.389240275388e-06!GO:0045892;negative regulation of transcription, DNA-dependent;3.62510382390233e-06!GO:0016881;acid-amino acid ligase activity;3.82207921340821e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.82207921340821e-06!GO:0043566;structure-specific DNA binding;3.94546470940323e-06!GO:0065004;protein-DNA complex assembly;3.99274220449692e-06!GO:0031252;leading edge;4.1994382880552e-06!GO:0043065;positive regulation of apoptosis;4.5260113564449e-06!GO:0046649;lymphocyte activation;5.62649196641998e-06!GO:0003714;transcription corepressor activity;6.25082513955626e-06!GO:0005856;cytoskeleton;6.66691201871365e-06!GO:0006099;tricarboxylic acid cycle;6.95928617916029e-06!GO:0046356;acetyl-CoA catabolic process;6.95928617916029e-06!GO:0030216;keratinocyte differentiation;7.09277629167027e-06!GO:0065002;intracellular protein transport across a membrane;7.94261517767974e-06!GO:0009966;regulation of signal transduction;8.89405418598338e-06!GO:0043068;positive regulation of programmed cell death;9.21258688060866e-06!GO:0004386;helicase activity;9.22171070816911e-06!GO:0046034;ATP metabolic process;1.13012514526928e-05!GO:0006164;purine nucleotide biosynthetic process;1.27473335824896e-05!GO:0051789;response to protein stimulus;1.27473335824896e-05!GO:0006986;response to unfolded protein;1.27473335824896e-05!GO:0048471;perinuclear region of cytoplasm;1.4320212359758e-05!GO:0009260;ribonucleotide biosynthetic process;1.46212705476934e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.48373415484895e-05!GO:0009967;positive regulation of signal transduction;1.70113090173461e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.70891382482766e-05!GO:0003697;single-stranded DNA binding;1.74642576410484e-05!GO:0004298;threonine endopeptidase activity;1.75073315565467e-05!GO:0009141;nucleoside triphosphate metabolic process;1.7866075975919e-05!GO:0030695;GTPase regulator activity;1.90596533485803e-05!GO:0032561;guanyl ribonucleotide binding;2.09536010072925e-05!GO:0019001;guanyl nucleotide binding;2.09536010072925e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.48989882600861e-05!GO:0042110;T cell activation;2.53020685715017e-05!GO:0009199;ribonucleoside triphosphate metabolic process;2.54769102379415e-05!GO:0016568;chromatin modification;2.55327577056215e-05!GO:0046930;pore complex;2.67668025096356e-05!GO:0032446;protein modification by small protein conjugation;2.87699197482631e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.15037909200374e-05!GO:0009144;purine nucleoside triphosphate metabolic process;3.15037909200374e-05!GO:0051028;mRNA transport;3.34632669334931e-05!GO:0007010;cytoskeleton organization and biogenesis;3.35822770494908e-05!GO:0008026;ATP-dependent helicase activity;3.35822770494908e-05!GO:0006084;acetyl-CoA metabolic process;3.52824500686452e-05!GO:0006613;cotranslational protein targeting to membrane;3.85001715393502e-05!GO:0016567;protein ubiquitination;3.9924166549744e-05!GO:0048468;cell development;4.05307789124036e-05!GO:0009109;coenzyme catabolic process;4.1043305700596e-05!GO:0000278;mitotic cell cycle;4.39529171397246e-05!GO:0044440;endosomal part;4.60124158927435e-05!GO:0010008;endosome membrane;4.60124158927435e-05!GO:0045786;negative regulation of progression through cell cycle;4.79373885320131e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.97446842349661e-05!GO:0006754;ATP biosynthetic process;4.97446842349661e-05!GO:0006753;nucleoside phosphate metabolic process;4.97446842349661e-05!GO:0045259;proton-transporting ATP synthase complex;4.97446842349661e-05!GO:0005083;small GTPase regulator activity;5.19085664847671e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.21114783032205e-05!GO:0065009;regulation of a molecular function;5.4873342119636e-05!GO:0044431;Golgi apparatus part;5.49533018342057e-05!GO:0051187;cofactor catabolic process;5.67250008032409e-05!GO:0006334;nucleosome assembly;5.94325199140204e-05!GO:0001533;cornified envelope;5.94325199140204e-05!GO:0000245;spliceosome assembly;6.1071802139548e-05!GO:0009719;response to endogenous stimulus;6.55903139843154e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.68498259746826e-05!GO:0004812;aminoacyl-tRNA ligase activity;6.68498259746826e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.68498259746826e-05!GO:0006281;DNA repair;7.85927030664995e-05!GO:0006917;induction of apoptosis;8.42483830877275e-05!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;8.56090075387026e-05!GO:0045321;leukocyte activation;9.29048000413941e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.57965130597496e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000104931656261496!GO:0060090;molecular adaptor activity;0.00010823774866143!GO:0006260;DNA replication;0.00010823774866143!GO:0030674;protein binding, bridging;0.000108279358353531!GO:0043038;amino acid activation;0.000113583551433404!GO:0006418;tRNA aminoacylation for protein translation;0.000113583551433404!GO:0043039;tRNA aminoacylation;0.000113583551433404!GO:0031497;chromatin assembly;0.000115244325943053!GO:0009142;nucleoside triphosphate biosynthetic process;0.000126098684832954!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000126098684832954!GO:0012502;induction of programmed cell death;0.000143521441190247!GO:0016044;membrane organization and biogenesis;0.000152663916633395!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000156081546789083!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000156081546789083!GO:0016197;endosome transport;0.000164085066173983!GO:0005798;Golgi-associated vesicle;0.000171390866329509!GO:0043623;cellular protein complex assembly;0.000179194503788893!GO:0003724;RNA helicase activity;0.0001809827090935!GO:0016072;rRNA metabolic process;0.000196359457860957!GO:0051168;nuclear export;0.000205282399242389!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00021696417210119!GO:0046983;protein dimerization activity;0.000249665379067056!GO:0006364;rRNA processing;0.000262203721467866!GO:0006417;regulation of translation;0.000271992050719052!GO:0045941;positive regulation of transcription;0.000278315167040739!GO:0006401;RNA catabolic process;0.000286082306360316!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000289168431635813!GO:0051427;hormone receptor binding;0.000348748672875481!GO:0009615;response to virus;0.000381055578823216!GO:0005885;Arp2/3 protein complex;0.000383450073190809!GO:0006402;mRNA catabolic process;0.000386618932127208!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000387412194926866!GO:0022890;inorganic cation transmembrane transporter activity;0.000389149732048071!GO:0000151;ubiquitin ligase complex;0.0003948621507896!GO:0045893;positive regulation of transcription, DNA-dependent;0.0004179229232256!GO:0033116;ER-Golgi intermediate compartment membrane;0.000440003822090806!GO:0005667;transcription factor complex;0.000485296039462664!GO:0019843;rRNA binding;0.000541247683487184!GO:0008047;enzyme activator activity;0.000545133445441479!GO:0016787;hydrolase activity;0.000590564797001605!GO:0035257;nuclear hormone receptor binding;0.000633821326184965!GO:0051188;cofactor biosynthetic process;0.000786273990644989!GO:0018193;peptidyl-amino acid modification;0.000822835864606027!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000823342590686318!GO:0016740;transferase activity;0.000833137133624446!GO:0030097;hemopoiesis;0.000883558472598389!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000888440067206385!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000964078437455467!GO:0051251;positive regulation of lymphocyte activation;0.000984834516293656!GO:0003702;RNA polymerase II transcription factor activity;0.00102214383613004!GO:0007005;mitochondrion organization and biogenesis;0.00104350334039913!GO:0030133;transport vesicle;0.00106018803115784!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00108069355722047!GO:0006979;response to oxidative stress;0.00113226380686349!GO:0015992;proton transport;0.00115603840715056!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00117805990367107!GO:0006818;hydrogen transport;0.00121666480103267!GO:0030118;clathrin coat;0.0012496451001171!GO:0006612;protein targeting to membrane;0.00127906642614009!GO:0002764;immune response-regulating signal transduction;0.00131026444362156!GO:0008186;RNA-dependent ATPase activity;0.00135075910432662!GO:0007266;Rho protein signal transduction;0.00135688562109195!GO:0015980;energy derivation by oxidation of organic compounds;0.0013789675766286!GO:0006955;immune response;0.00139748208607981!GO:0005070;SH3/SH2 adaptor activity;0.00139748208607981!GO:0003690;double-stranded DNA binding;0.00141025372345668!GO:0000139;Golgi membrane;0.00143427438901722!GO:0051235;maintenance of localization;0.00143542330836149!GO:0001726;ruffle;0.00149163575184401!GO:0005769;early endosome;0.00159746649110969!GO:0002520;immune system development;0.00161325244032095!GO:0043021;ribonucleoprotein binding;0.00171543482571917!GO:0000087;M phase of mitotic cell cycle;0.00175217738525503!GO:0019904;protein domain specific binding;0.00177769396316285!GO:0030027;lamellipodium;0.00183910120108937!GO:0033673;negative regulation of kinase activity;0.00184224302759487!GO:0006469;negative regulation of protein kinase activity;0.00184224302759487!GO:0006752;group transfer coenzyme metabolic process;0.0018680359989033!GO:0005096;GTPase activator activity;0.00187166202211787!GO:0006399;tRNA metabolic process;0.00189695564971704!GO:0051920;peroxiredoxin activity;0.00193659514377453!GO:0007067;mitosis;0.00193659514377453!GO:0006607;NLS-bearing substrate import into nucleus;0.0019721312523168!GO:0009117;nucleotide metabolic process;0.00199719139211391!GO:0005788;endoplasmic reticulum lumen;0.0020588705841777!GO:0006891;intra-Golgi vesicle-mediated transport;0.0021771832100343!GO:0022403;cell cycle phase;0.00221343113474331!GO:0009893;positive regulation of metabolic process;0.00225452114418791!GO:0001775;cell activation;0.00228707588384351!GO:0030658;transport vesicle membrane;0.00236961504419812!GO:0042613;MHC class II protein complex;0.00240953280471827!GO:0031326;regulation of cellular biosynthetic process;0.00244654482750902!GO:0005938;cell cortex;0.00252900512046294!GO:0009108;coenzyme biosynthetic process;0.00255702202052399!GO:0000786;nucleosome;0.00269109364398045!GO:0005048;signal sequence binding;0.00274528720100389!GO:0008307;structural constituent of muscle;0.0028749103724412!GO:0050851;antigen receptor-mediated signaling pathway;0.00288189878404318!GO:0005791;rough endoplasmic reticulum;0.0029340038177754!GO:0048534;hemopoietic or lymphoid organ development;0.00295926075295181!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00304419151166193!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00304419151166193!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00304419151166193!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0031065232989864!GO:0030217;T cell differentiation;0.00311130534565261!GO:0002757;immune response-activating signal transduction;0.00334836836092152!GO:0005774;vacuolar membrane;0.00334836836092152!GO:0006414;translational elongation;0.00344175798275977!GO:0051252;regulation of RNA metabolic process;0.00348204283861301!GO:0051348;negative regulation of transferase activity;0.00356205327172137!GO:0016779;nucleotidyltransferase activity;0.00370383879330266!GO:0051128;regulation of cellular component organization and biogenesis;0.00370383879330266!GO:0004004;ATP-dependent RNA helicase activity;0.00370383879330266!GO:0001666;response to hypoxia;0.00386327300443754!GO:0019222;regulation of metabolic process;0.00394123057981464!GO:0001772;immunological synapse;0.00398339882859274!GO:0016301;kinase activity;0.00400930755942159!GO:0045121;lipid raft;0.00400930755942159!GO:0004674;protein serine/threonine kinase activity;0.00414132102854646!GO:0005865;striated muscle thin filament;0.00414458441154256!GO:0008154;actin polymerization and/or depolymerization;0.00420785879421897!GO:0030041;actin filament polymerization;0.00420962214535951!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00437267023334056!GO:0016791;phosphoric monoester hydrolase activity;0.00448272655384665!GO:0031902;late endosome membrane;0.0044962686158576!GO:0050863;regulation of T cell activation;0.00465104198308533!GO:0005912;adherens junction;0.00482265900982905!GO:0043488;regulation of mRNA stability;0.0051099815145005!GO:0043487;regulation of RNA stability;0.0051099815145005!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00517089661383391!GO:0051249;regulation of lymphocyte activation;0.00535058489366373!GO:0030127;COPII vesicle coat;0.00548750117104755!GO:0012507;ER to Golgi transport vesicle membrane;0.00548750117104755!GO:0046822;regulation of nucleocytoplasmic transport;0.00550952283800563!GO:0008283;cell proliferation;0.00551589842814718!GO:0050790;regulation of catalytic activity;0.00553306441828626!GO:0008632;apoptotic program;0.00560636920537419!GO:0022415;viral reproductive process;0.005835922967519!GO:0005741;mitochondrial outer membrane;0.00592565347509321!GO:0050865;regulation of cell activation;0.00616484052053796!GO:0005905;coated pit;0.00620071534763862!GO:0008250;oligosaccharyl transferase complex;0.00658224235797024!GO:0044449;contractile fiber part;0.00675847882793327!GO:0048500;signal recognition particle;0.00679639632558231!GO:0008361;regulation of cell size;0.00695537571891579!GO:0043087;regulation of GTPase activity;0.00707846863657301!GO:0045454;cell redox homeostasis;0.00726305443892159!GO:0016049;cell growth;0.00763051042841614!GO:0030134;ER to Golgi transport vesicle;0.00763051042841614!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00765919726846095!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00780222534246975!GO:0050870;positive regulation of T cell activation;0.00785710391652543!GO:0005813;centrosome;0.0082494232575288!GO:0031968;organelle outer membrane;0.00832009811764707!GO:0030660;Golgi-associated vesicle membrane;0.008440534050286!GO:0002521;leukocyte differentiation;0.00869746127020633!GO:0006611;protein export from nucleus;0.00879916210511458!GO:0035258;steroid hormone receptor binding;0.00896436284481218!GO:0005762;mitochondrial large ribosomal subunit;0.00900394070618632!GO:0000315;organellar large ribosomal subunit;0.00900394070618632!GO:0051087;chaperone binding;0.00900947152779784!GO:0017022;myosin binding;0.00900947152779784!GO:0032940;secretion by cell;0.00914125544987927!GO:0008139;nuclear localization sequence binding;0.00922877689184177!GO:0016126;sterol biosynthetic process;0.00941178238412251!GO:0031325;positive regulation of cellular metabolic process;0.00942385840656769!GO:0030433;ER-associated protein catabolic process;0.0102030035931422!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0102030035931422!GO:0030867;rough endoplasmic reticulum membrane;0.0104782406218855!GO:0019867;outer membrane;0.0105453770948127!GO:0051238;sequestering of metal ion;0.0105550466103167!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.010698136343606!GO:0030132;clathrin coat of coated pit;0.0109155727032897!GO:0006650;glycerophospholipid metabolic process;0.0110787864764759!GO:0051336;regulation of hydrolase activity;0.0113109445081696!GO:0005862;muscle thin filament tropomyosin;0.0113834765405417!GO:0006091;generation of precursor metabolites and energy;0.0116459555104733!GO:0008234;cysteine-type peptidase activity;0.0117118418344425!GO:0004576;oligosaccharyl transferase activity;0.0117160984442472!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0118496352326636!GO:0009889;regulation of biosynthetic process;0.0118651084493517!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0119084830057727!GO:0015399;primary active transmembrane transporter activity;0.0119084830057727!GO:0030098;lymphocyte differentiation;0.0120545471077393!GO:0005057;receptor signaling protein activity;0.0121493037641852!GO:0045045;secretory pathway;0.0121493037641852!GO:0005765;lysosomal membrane;0.0123459325573095!GO:0003729;mRNA binding;0.0123830325572228!GO:0004721;phosphoprotein phosphatase activity;0.0130081469800568!GO:0051056;regulation of small GTPase mediated signal transduction;0.0130581427844474!GO:0031032;actomyosin structure organization and biogenesis;0.0131331491740612!GO:0030119;AP-type membrane coat adaptor complex;0.0132568461987439!GO:0030031;cell projection biogenesis;0.0135176592620542!GO:0044437;vacuolar part;0.0135264272244386!GO:0035035;histone acetyltransferase binding;0.0140392772758746!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0144889323134079!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0146869291590453!GO:0030131;clathrin adaptor complex;0.0146869291590453!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0148996769326833!GO:0045047;protein targeting to ER;0.0148996769326833!GO:0016859;cis-trans isomerase activity;0.0149643132579954!GO:0016363;nuclear matrix;0.0151634820520819!GO:0043292;contractile fiber;0.0153436365998901!GO:0000059;protein import into nucleus, docking;0.0153436365998901!GO:0030663;COPI coated vesicle membrane;0.0155014071036122!GO:0030126;COPI vesicle coat;0.0155014071036122!GO:0045792;negative regulation of cell size;0.0155222373056522!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0156995396055157!GO:0046578;regulation of Ras protein signal transduction;0.0161008957318496!GO:0030176;integral to endoplasmic reticulum membrane;0.016255432143977!GO:0030521;androgen receptor signaling pathway;0.0162894496573426!GO:0003746;translation elongation factor activity;0.0163241751908427!GO:0009607;response to biotic stimulus;0.0165279574004719!GO:0042113;B cell activation;0.0169326311491967!GO:0005637;nuclear inner membrane;0.0170755546495142!GO:0051301;cell division;0.0172010078215518!GO:0030518;steroid hormone receptor signaling pathway;0.0178081969471101!GO:0030384;phosphoinositide metabolic process;0.0179000205140098!GO:0008312;7S RNA binding;0.0181480622934464!GO:0051098;regulation of binding;0.018470476879276!GO:0042101;T cell receptor complex;0.018470476879276!GO:0006984;ER-nuclear signaling pathway;0.0188725886648485!GO:0016584;nucleosome positioning;0.0189131406124282!GO:0016853;isomerase activity;0.0191245482061739!GO:0004860;protein kinase inhibitor activity;0.0194012854783174!GO:0031072;heat shock protein binding;0.019640007831268!GO:0050852;T cell receptor signaling pathway;0.0199904761667218!GO:0030308;negative regulation of cell growth;0.0200595011118376!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.020260115629339!GO:0005657;replication fork;0.0204886668911486!GO:0005099;Ras GTPase activator activity;0.0206066345122077!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0208680934204267!GO:0001558;regulation of cell growth;0.0209199713099884!GO:0051101;regulation of DNA binding;0.0218650537108136!GO:0008654;phospholipid biosynthetic process;0.0219650411663715!GO:0051223;regulation of protein transport;0.0224319149939777!GO:0043681;protein import into mitochondrion;0.0231046788512484!GO:0006468;protein amino acid phosphorylation;0.0232416349758151!GO:0051338;regulation of transferase activity;0.02335294180735!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0236834826563686!GO:0019210;kinase inhibitor activity;0.0239381281608254!GO:0051262;protein tetramerization;0.0242571096513807!GO:0048487;beta-tubulin binding;0.0245856539879741!GO:0032395;MHC class II receptor activity;0.0247085180424343!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0248505102100662!GO:0015002;heme-copper terminal oxidase activity;0.0248505102100662!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0248505102100662!GO:0004129;cytochrome-c oxidase activity;0.0248505102100662!GO:0000314;organellar small ribosomal subunit;0.0248505102100662!GO:0005763;mitochondrial small ribosomal subunit;0.0248505102100662!GO:0030137;COPI-coated vesicle;0.0248883736422466!GO:0006897;endocytosis;0.0255585875308021!GO:0010324;membrane invagination;0.0255585875308021!GO:0008637;apoptotic mitochondrial changes;0.0258495364004554!GO:0047485;protein N-terminus binding;0.0259662889173769!GO:0005684;U2-dependent spliceosome;0.026576891935944!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.0266255867694191!GO:0030016;myofibril;0.0268356109214454!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0269234051263995!GO:0045113;regulation of integrin biosynthetic process;0.0273115202820556!GO:0045112;integrin biosynthetic process;0.0273115202820556!GO:0043492;ATPase activity, coupled to movement of substances;0.0273829610355484!GO:0006376;mRNA splice site selection;0.0278216872353531!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0278216872353531!GO:0006695;cholesterol biosynthetic process;0.0283811037848504!GO:0006892;post-Golgi vesicle-mediated transport;0.0288300221335517!GO:0005815;microtubule organizing center;0.0301403913707225!GO:0051283;negative regulation of sequestering of calcium ion;0.030577518128835!GO:0051282;regulation of sequestering of calcium ion;0.030577518128835!GO:0051209;release of sequestered calcium ion into cytosol;0.030577518128835!GO:0043022;ribosome binding;0.0305977118728172!GO:0030125;clathrin vesicle coat;0.0305977118728172!GO:0030665;clathrin coated vesicle membrane;0.0305977118728172!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0305977118728172!GO:0008629;induction of apoptosis by intracellular signals;0.0307748811405511!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0308444155763647!GO:0042805;actinin binding;0.031011940002704!GO:0017166;vinculin binding;0.0310956920073921!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.031506768168975!GO:0006405;RNA export from nucleus;0.0317172631028705!GO:0008287;protein serine/threonine phosphatase complex;0.0318140447627991!GO:0003682;chromatin binding;0.0320993192789208!GO:0000279;M phase;0.0331053279988922!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0331053279988922!GO:0009897;external side of plasma membrane;0.0332347784397351!GO:0051049;regulation of transport;0.033323136417085!GO:0004722;protein serine/threonine phosphatase activity;0.0333391400834626!GO:0003711;transcription elongation regulator activity;0.0341818691130681!GO:0018196;peptidyl-asparagine modification;0.035323795962934!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.035323795962934!GO:0006643;membrane lipid metabolic process;0.0354076321727753!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0354076321727753!GO:0033043;regulation of organelle organization and biogenesis;0.0354076321727753!GO:0051059;NF-kappaB binding;0.0360099633991099!GO:0043433;negative regulation of transcription factor activity;0.0360099633991099!GO:0016311;dephosphorylation;0.0362115482100092!GO:0031901;early endosome membrane;0.0366213699534593!GO:0051289;protein homotetramerization;0.0366213699534593!GO:0032594;protein transport within lipid bilayer;0.0366213699534593!GO:0032907;transforming growth factor-beta3 production;0.0366213699534593!GO:0032596;protein transport into lipid raft;0.0366213699534593!GO:0032910;regulation of transforming growth factor-beta3 production;0.0366213699534593!GO:0032595;B cell receptor transport within lipid bilayer;0.0366213699534593!GO:0033606;chemokine receptor transport within lipid bilayer;0.0366213699534593!GO:0032600;chemokine receptor transport out of lipid raft;0.0366213699534593!GO:0032599;protein transport out of lipid raft;0.0366213699534593!GO:0032597;B cell receptor transport into lipid raft;0.0366213699534593!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0366213699534593!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0368000803464711!GO:0002443;leukocyte mediated immunity;0.0368811877958043!GO:0030832;regulation of actin filament length;0.0372354403341899!GO:0008022;protein C-terminus binding;0.0373194325242196!GO:0051325;interphase;0.0374025786989723!GO:0043549;regulation of kinase activity;0.0381475925381622!GO:0051090;regulation of transcription factor activity;0.0390715791003176!GO:0031529;ruffle organization and biogenesis;0.0390715791003176!GO:0006595;polyamine metabolic process;0.0390715791003176!GO:0043621;protein self-association;0.039089803283293!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0393858118431883!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0393858118431883!GO:0045730;respiratory burst;0.0399968087260315!GO:0008538;proteasome activator activity;0.0412019187340974!GO:0005832;chaperonin-containing T-complex;0.0421747645548664!GO:0019902;phosphatase binding;0.0428745627339523!GO:0033157;regulation of intracellular protein transport;0.0430041487751082!GO:0042306;regulation of protein import into nucleus;0.0430041487751082!GO:0051092;activation of NF-kappaB transcription factor;0.0433924618343975!GO:0030017;sarcomere;0.0438198786213428!GO:0001725;stress fiber;0.0441438461119898!GO:0032432;actin filament bundle;0.0441438461119898!GO:0005869;dynactin complex;0.044612090683304!GO:0032535;regulation of cellular component size;0.0447693086979932!GO:0045947;negative regulation of translational initiation;0.0448627581483325!GO:0051146;striated muscle cell differentiation;0.0452268454300999!GO:0000303;response to superoxide;0.0455842870416066!GO:0007006;mitochondrial membrane organization and biogenesis;0.0456136970533239!GO:0008286;insulin receptor signaling pathway;0.0460529608323168!GO:0004197;cysteine-type endopeptidase activity;0.0462835015256993!GO:0040029;regulation of gene expression, epigenetic;0.0468988389688261!GO:0032508;DNA duplex unwinding;0.0477360902679006!GO:0032392;DNA geometric change;0.0477360902679006!GO:0005913;cell-cell adherens junction;0.0479451025379716!GO:0009261;ribonucleotide catabolic process;0.0479451025379716!GO:0030833;regulation of actin filament polymerization;0.047960431679876!GO:0006693;prostaglandin metabolic process;0.0485577485598639!GO:0006692;prostanoid metabolic process;0.0485577485598639!GO:0006672;ceramide metabolic process;0.0485577485598639!GO:0007009;plasma membrane organization and biogenesis;0.0485577485598639!GO:0050853;B cell receptor signaling pathway;0.0487436490278831!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0492078758779103!GO:0002253;activation of immune response;0.0497997191943892 | |||
|sample_id=10047 | |sample_id=10047 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=tonsil | |sample_tissue=tonsil | ||
|top_motifs=TBP:3.25904758314;POU2F1..3:3.15661160874;POU5F1:3.02764869432;TFCP2:2.40557584753;SNAI1..3:2.31166130602;ZEB1:2.2223605852;MYOD1:1.76368113507;LMO2:1.76026503044;TLX2:1.73989147259;MEF2{A,B,C,D}:1.6783608122;SP1:1.66779489656;ZNF148:1.55830813459;IRF7:1.55774722686;ETS1,2:1.51161667186;ELF1,2,4:1.48969265143;RBPJ:1.36576048065;XCPE1{core}:1.36537120521;TBX4,5:1.35181490573;FOX{F1,F2,J1}:1.30097732422;VSX1,2:1.24063448481;EP300:1.18634386011;TFAP4:1.16859923136;TGIF1:1.10298637225;SOX5:1.08111433529;FOXO1,3,4:1.01677800204;SPI1:0.984094762917;MAZ:0.965111049713;IRF1,2:0.964330620424;HMX1:0.963065999204;T:0.95487529113;NANOG:0.936450436904;RUNX1..3:0.924254884836;ZNF423:0.917888818408;FOXA2:0.909483696152;TFAP2{A,C}:0.901436728646;FOX{D1,D2}:0.897821532045;SPIB:0.822359955175;PAX6:0.819398010391;NKX2-3_NKX2-5:0.778504511719;RXRA_VDR{dimer}:0.768869537336;RREB1:0.759658294494;SPZ1:0.750214128182;MYFfamily:0.692703635526;SRF:0.661622496665;NFATC1..3:0.656108320637;TP53:0.653845028787;HAND1,2:0.652792979443;PATZ1:0.647604366091;ESR1:0.63204407007;MTF1:0.591672713233;PBX1:0.582772506972;FOXN1:0.556375539694;SMAD1..7,9:0.551259474046;MED-1{core}:0.509964604644;GLI1..3:0.432509710817;NFY{A,B,C}:0.428207173415;TAL1_TCF{3,4,12}:0.423192121232;DMAP1_NCOR{1,2}_SMARC:0.405307437536;ATF2:0.399361934451;NKX2-1,4:0.38102370452;ATF6:0.377863382528;EGR1..3:0.355758085393;ZNF238:0.354755639206;JUN:0.354578916405;PAX3,7:0.341934285861;TLX1..3_NFIC{dimer}:0.328296429485;SREBF1,2:0.315661160128;PDX1:0.31248004044;BPTF:0.307212096513;GTF2I:0.29730817014;GCM1,2:0.29283928021;NFKB1_REL_RELA:0.272839035842;EBF1:0.257759116413;SOX2:0.255996586088;GTF2A1,2:0.248192813028;SOX{8,9,10}:0.242825305778;GATA6:0.227765533967;HIC1:0.222887369256;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.210557814304;NHLH1,2:0.202053879635;NKX6-1,2:0.191655310407;NR5A1,2:0.188807544652;BREu{core}:0.178583233376;AR:0.16616261883;CRX:0.156681975087;CDC5L:0.14742160229;NKX3-2:0.0912891360545;ZFP161:0.0896745410784;MTE{core}:0.0868166758079;CUX2:0.0782637120638;MZF1:0.0132274882417;STAT1,3:-0.000931883244136;GFI1:-0.0134037276277;TEAD1:-0.0360953469008;LEF1_TCF7_TCF7L1,2:-0.0472631147951;FOS_FOS{B,L1}_JUN{B,D}:-0.0508783087069;RORA:-0.0651104335119;PITX1..3:-0.071409863106;E2F1..5:-0.0789639187634;STAT2,4,6:-0.0834888355918;DBP:-0.088537882293;ZNF143:-0.103330868264;ALX4:-0.11051232341;MYBL2:-0.111193702367;TFAP2B:-0.128492030643;MAFB:-0.135670137093;PRDM1:-0.153665186873;TOPORS:-0.187073293368;NR1H4:-0.198324893677;OCT4_SOX2{dimer}:-0.2441356764;PAX5:-0.245936320186;FOSL2:-0.265522547279;HBP1_HMGB_SSRP1_UBTF:-0.26724391641;REST:-0.274369463415;AIRE:-0.287582002557;GATA4:-0.288570481809;HNF4A_NR2F1,2:-0.301079675524;RFX2..5_RFXANK_RFXAP:-0.301741162136;ELK1,4_GABP{A,B1}:-0.310612447954;HES1:-0.312815319348;NFIL3:-0.317954519604;ZIC1..3:-0.323553808645;ZNF384:-0.323591211253;CEBPA,B_DDIT3:-0.332083969276;bHLH_family:-0.352296810091;HSF1,2:-0.360369939387;HIF1A:-0.380003511407;FOXP1:-0.381053690518;NRF1:-0.415139399978;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.416750809087;ATF4:-0.421168185261;ADNP_IRX_SIX_ZHX:-0.424766171723;FOX{I1,J2}:-0.434197012325;NFIX:-0.444169869931;PAX2:-0.45205149892;POU6F1:-0.479380285975;IKZF1:-0.487983887279;GFI1B:-0.500373552421;FOXL1:-0.505103868147;HNF1A:-0.509609636853;NFE2:-0.533225648676;BACH2:-0.547842793036;ATF5_CREB3:-0.554796781906;NANOG{mouse}:-0.564778789838;FOXQ1:-0.575622561394;MYB:-0.62272082476;PRRX1,2:-0.633651662912;TFDP1:-0.639162456864;IKZF2:-0.652905430502;POU1F1:-0.664600558916;FOXM1:-0.672037457584;HLF:-0.674055307512;CREB1:-0.691418356374;XBP1:-0.707273362887;HOX{A4,D4}:-0.772080572217;HOX{A6,A7,B6,B7}:-0.772410814517;KLF4:-0.813825412898;LHX3,4:-0.833708084943;NFE2L2:-0.846138130078;ESRRA:-0.879572128668;NFE2L1:-0.890034376591;ZBTB6:-0.91505815991;PAX1,9:-0.916321309188;SOX17:-0.944393023166;FOXP3:-0.947959517911;YY1:-0.956484527884;AHR_ARNT_ARNT2:-0.968574072847;GZF1:-0.987363660795;NR6A1:-1.0153365996;CDX1,2,4:-1.05541611097;RXR{A,B,G}:-1.07787008344;STAT5{A,B}:-1.08808560207;RFX1:-1.14118445605;NR3C1:-1.19983761507;POU3F1..4:-1.25712135847;PPARG:-1.25806262253;HOXA9_MEIS1:-1.32300468673;EN1,2:-1.42895426893;ARID5B:-1.46695334411;NKX3-1:-1.49867723952;ALX1:-1.51655056738;HOX{A5,B5}:-1.52677984198;UFEwm:-1.56658044966;ZBTB16:-1.57488056846;ONECUT1,2:-1.57697140625;NKX2-2,8:-1.59066022876;EVI1:-1.72273358353;FOXD3:-1.92337115335;TEF:-2.07726665989;PAX8:-2.07926762392;HMGA1,2:-2.13187491054;PAX4:-2.24493340177 | |top_motifs=TBP:3.25904758314;POU2F1..3:3.15661160874;POU5F1:3.02764869432;TFCP2:2.40557584753;SNAI1..3:2.31166130602;ZEB1:2.2223605852;MYOD1:1.76368113507;LMO2:1.76026503044;TLX2:1.73989147259;MEF2{A,B,C,D}:1.6783608122;SP1:1.66779489656;ZNF148:1.55830813459;IRF7:1.55774722686;ETS1,2:1.51161667186;ELF1,2,4:1.48969265143;RBPJ:1.36576048065;XCPE1{core}:1.36537120521;TBX4,5:1.35181490573;FOX{F1,F2,J1}:1.30097732422;VSX1,2:1.24063448481;EP300:1.18634386011;TFAP4:1.16859923136;TGIF1:1.10298637225;SOX5:1.08111433529;FOXO1,3,4:1.01677800204;SPI1:0.984094762917;MAZ:0.965111049713;IRF1,2:0.964330620424;HMX1:0.963065999204;T:0.95487529113;NANOG:0.936450436904;RUNX1..3:0.924254884836;ZNF423:0.917888818408;FOXA2:0.909483696152;TFAP2{A,C}:0.901436728646;FOX{D1,D2}:0.897821532045;SPIB:0.822359955175;PAX6:0.819398010391;NKX2-3_NKX2-5:0.778504511719;RXRA_VDR{dimer}:0.768869537336;RREB1:0.759658294494;SPZ1:0.750214128182;MYFfamily:0.692703635526;SRF:0.661622496665;NFATC1..3:0.656108320637;TP53:0.653845028787;HAND1,2:0.652792979443;PATZ1:0.647604366091;ESR1:0.63204407007;MTF1:0.591672713233;PBX1:0.582772506972;FOXN1:0.556375539694;SMAD1..7,9:0.551259474046;MED-1{core}:0.509964604644;GLI1..3:0.432509710817;NFY{A,B,C}:0.428207173415;TAL1_TCF{3,4,12}:0.423192121232;DMAP1_NCOR{1,2}_SMARC:0.405307437536;ATF2:0.399361934451;NKX2-1,4:0.38102370452;ATF6:0.377863382528;EGR1..3:0.355758085393;ZNF238:0.354755639206;JUN:0.354578916405;PAX3,7:0.341934285861;TLX1..3_NFIC{dimer}:0.328296429485;SREBF1,2:0.315661160128;PDX1:0.31248004044;BPTF:0.307212096513;GTF2I:0.29730817014;GCM1,2:0.29283928021;NFKB1_REL_RELA:0.272839035842;EBF1:0.257759116413;SOX2:0.255996586088;GTF2A1,2:0.248192813028;SOX{8,9,10}:0.242825305778;GATA6:0.227765533967;HIC1:0.222887369256;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.210557814304;NHLH1,2:0.202053879635;NKX6-1,2:0.191655310407;NR5A1,2:0.188807544652;BREu{core}:0.178583233376;AR:0.16616261883;CRX:0.156681975087;CDC5L:0.14742160229;NKX3-2:0.0912891360545;ZFP161:0.0896745410784;MTE{core}:0.0868166758079;CUX2:0.0782637120638;MZF1:0.0132274882417;STAT1,3:-0.000931883244136;GFI1:-0.0134037276277;TEAD1:-0.0360953469008;LEF1_TCF7_TCF7L1,2:-0.0472631147951;FOS_FOS{B,L1}_JUN{B,D}:-0.0508783087069;RORA:-0.0651104335119;PITX1..3:-0.071409863106;E2F1..5:-0.0789639187634;STAT2,4,6:-0.0834888355918;DBP:-0.088537882293;ZNF143:-0.103330868264;ALX4:-0.11051232341;MYBL2:-0.111193702367;TFAP2B:-0.128492030643;MAFB:-0.135670137093;PRDM1:-0.153665186873;TOPORS:-0.187073293368;NR1H4:-0.198324893677;OCT4_SOX2{dimer}:-0.2441356764;PAX5:-0.245936320186;FOSL2:-0.265522547279;HBP1_HMGB_SSRP1_UBTF:-0.26724391641;REST:-0.274369463415;AIRE:-0.287582002557;GATA4:-0.288570481809;HNF4A_NR2F1,2:-0.301079675524;RFX2..5_RFXANK_RFXAP:-0.301741162136;ELK1,4_GABP{A,B1}:-0.310612447954;HES1:-0.312815319348;NFIL3:-0.317954519604;ZIC1..3:-0.323553808645;ZNF384:-0.323591211253;CEBPA,B_DDIT3:-0.332083969276;bHLH_family:-0.352296810091;HSF1,2:-0.360369939387;HIF1A:-0.380003511407;FOXP1:-0.381053690518;NRF1:-0.415139399978;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.416750809087;ATF4:-0.421168185261;ADNP_IRX_SIX_ZHX:-0.424766171723;FOX{I1,J2}:-0.434197012325;NFIX:-0.444169869931;PAX2:-0.45205149892;POU6F1:-0.479380285975;IKZF1:-0.487983887279;GFI1B:-0.500373552421;FOXL1:-0.505103868147;HNF1A:-0.509609636853;NFE2:-0.533225648676;BACH2:-0.547842793036;ATF5_CREB3:-0.554796781906;NANOG{mouse}:-0.564778789838;FOXQ1:-0.575622561394;MYB:-0.62272082476;PRRX1,2:-0.633651662912;TFDP1:-0.639162456864;IKZF2:-0.652905430502;POU1F1:-0.664600558916;FOXM1:-0.672037457584;HLF:-0.674055307512;CREB1:-0.691418356374;XBP1:-0.707273362887;HOX{A4,D4}:-0.772080572217;HOX{A6,A7,B6,B7}:-0.772410814517;KLF4:-0.813825412898;LHX3,4:-0.833708084943;NFE2L2:-0.846138130078;ESRRA:-0.879572128668;NFE2L1:-0.890034376591;ZBTB6:-0.91505815991;PAX1,9:-0.916321309188;SOX17:-0.944393023166;FOXP3:-0.947959517911;YY1:-0.956484527884;AHR_ARNT_ARNT2:-0.968574072847;GZF1:-0.987363660795;NR6A1:-1.0153365996;CDX1,2,4:-1.05541611097;RXR{A,B,G}:-1.07787008344;STAT5{A,B}:-1.08808560207;RFX1:-1.14118445605;NR3C1:-1.19983761507;POU3F1..4:-1.25712135847;PPARG:-1.25806262253;HOXA9_MEIS1:-1.32300468673;EN1,2:-1.42895426893;ARID5B:-1.46695334411;NKX3-1:-1.49867723952;ALX1:-1.51655056738;HOX{A5,B5}:-1.52677984198;UFEwm:-1.56658044966;ZBTB16:-1.57488056846;ONECUT1,2:-1.57697140625;NKX2-2,8:-1.59066022876;EVI1:-1.72273358353;FOXD3:-1.92337115335;TEF:-2.07726665989;PAX8:-2.07926762392;HMGA1,2:-2.13187491054;PAX4:-2.24493340177 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10047-101G2;search_select_hide=table117:FF:10047-101G2 | |||
}} | }} | ||
Latest revision as of 12:17, 3 June 2020
| Name: | tonsil, adult, pool1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10654 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10654
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10654
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.497 |
| 10 | 10 | 0.0428 |
| 100 | 100 | 0.0947 |
| 101 | 101 | 0.913 |
| 102 | 102 | 0.634 |
| 103 | 103 | 0.649 |
| 104 | 104 | 0.698 |
| 105 | 105 | 0.0909 |
| 106 | 106 | 0.365 |
| 107 | 107 | 0.161 |
| 108 | 108 | 0.811 |
| 109 | 109 | 0.972 |
| 11 | 11 | 0.841 |
| 110 | 110 | 0.617 |
| 111 | 111 | 0.333 |
| 112 | 112 | 0.201 |
| 113 | 113 | 0.0548 |
| 114 | 114 | 0.156 |
| 115 | 115 | 0.596 |
| 116 | 116 | 0.0973 |
| 117 | 117 | 0.339 |
| 118 | 118 | 0.0338 |
| 119 | 119 | 0.724 |
| 12 | 12 | 0.595 |
| 120 | 120 | 0.17 |
| 121 | 121 | 0.0595 |
| 122 | 122 | 0.177 |
| 123 | 123 | 0.368 |
| 124 | 124 | 0.515 |
| 125 | 125 | 0.907 |
| 126 | 126 | 0.146 |
| 127 | 127 | 0.257 |
| 128 | 128 | 0.612 |
| 129 | 129 | 0.861 |
| 13 | 13 | 0.272 |
| 130 | 130 | 0.375 |
| 131 | 131 | 0.587 |
| 132 | 132 | 0.261 |
| 133 | 133 | 4.73588e-4 |
| 134 | 134 | 0.00157 |
| 135 | 135 | 0.0246 |
| 136 | 136 | 0.964 |
| 137 | 137 | 0.249 |
| 138 | 138 | 0.968 |
| 139 | 139 | 0.551 |
| 14 | 14 | 0.425 |
| 140 | 140 | 0.561 |
| 141 | 141 | 0.324 |
| 142 | 142 | 0.596 |
| 143 | 143 | 0.947 |
| 144 | 144 | 0.0518 |
| 145 | 145 | 0.415 |
| 146 | 146 | 0.0133 |
| 147 | 147 | 0.826 |
| 148 | 148 | 0.841 |
| 149 | 149 | 0.0871 |
| 15 | 15 | 0.236 |
| 150 | 150 | 0.89 |
| 151 | 151 | 0.507 |
| 152 | 152 | 0.109 |
| 153 | 153 | 0.324 |
| 154 | 154 | 0.56 |
| 155 | 155 | 0.618 |
| 156 | 156 | 0.916 |
| 157 | 157 | 0.204 |
| 158 | 158 | 0.969 |
| 159 | 159 | 0.615 |
| 16 | 16 | 0.833 |
| 160 | 160 | 0.673 |
| 161 | 161 | 0.88 |
| 162 | 162 | 0.698 |
| 163 | 163 | 0.447 |
| 164 | 164 | 0.0243 |
| 165 | 165 | 0.697 |
| 166 | 166 | 0.914 |
| 167 | 167 | 0.0446 |
| 168 | 168 | 2.72809e-4 |
| 169 | 169 | 0.168 |
| 17 | 17 | 0.719 |
| 18 | 18 | 0.108 |
| 19 | 19 | 0.675 |
| 2 | 2 | 0.028 |
| 20 | 20 | 0.12 |
| 21 | 21 | 0.726 |
| 22 | 22 | 0.327 |
| 23 | 23 | 0.452 |
| 24 | 24 | 0.781 |
| 25 | 25 | 0.477 |
| 26 | 26 | 0.717 |
| 27 | 27 | 0.144 |
| 28 | 28 | 0.843 |
| 29 | 29 | 0.232 |
| 3 | 3 | 0.872 |
| 30 | 30 | 0.0207 |
| 31 | 31 | 0.947 |
| 32 | 32 | 0.0747 |
| 33 | 33 | 0.689 |
| 34 | 34 | 0.322 |
| 35 | 35 | 0.23 |
| 36 | 36 | 0.0989 |
| 37 | 37 | 0.625 |
| 38 | 38 | 0.579 |
| 39 | 39 | 0.911 |
| 4 | 4 | 0.958 |
| 40 | 40 | 0.878 |
| 41 | 41 | 0.754 |
| 42 | 42 | 0.933 |
| 43 | 43 | 0.968 |
| 44 | 44 | 0.903 |
| 45 | 45 | 0.0178 |
| 46 | 46 | 0.795 |
| 47 | 47 | 0.75 |
| 48 | 48 | 0.944 |
| 49 | 49 | 0.826 |
| 5 | 5 | 0.811 |
| 50 | 50 | 0.345 |
| 51 | 51 | 0.966 |
| 52 | 52 | 0.238 |
| 53 | 53 | 0.286 |
| 54 | 54 | 0.849 |
| 55 | 55 | 0.639 |
| 56 | 56 | 0.76 |
| 57 | 57 | 0.294 |
| 58 | 58 | 0.483 |
| 59 | 59 | 0.336 |
| 6 | 6 | 0.309 |
| 60 | 60 | 0.303 |
| 61 | 61 | 0.707 |
| 62 | 62 | 0.837 |
| 63 | 63 | 0.487 |
| 64 | 64 | 0.955 |
| 65 | 65 | 0.526 |
| 66 | 66 | 0.528 |
| 67 | 67 | 0.47 |
| 68 | 68 | 0.724 |
| 69 | 69 | 0.901 |
| 7 | 7 | 0.522 |
| 70 | 70 | 0.239 |
| 71 | 71 | 0.273 |
| 72 | 72 | 0.0609 |
| 73 | 73 | 0.762 |
| 74 | 74 | 0.105 |
| 75 | 75 | 0.342 |
| 76 | 76 | 0.0628 |
| 77 | 77 | 0.226 |
| 78 | 78 | 0.617 |
| 79 | 79 | 0.145 |
| 8 | 8 | 0.604 |
| 80 | 80 | 7.56823e-5 |
| 81 | 81 | 0.771 |
| 82 | 82 | 0.9 |
| 83 | 83 | 0.728 |
| 84 | 84 | 0.111 |
| 85 | 85 | 0.945 |
| 86 | 86 | 0.788 |
| 87 | 87 | 0.56 |
| 88 | 88 | 0.812 |
| 89 | 89 | 0.666 |
| 9 | 9 | 0.173 |
| 90 | 90 | 0.0755 |
| 91 | 91 | 0.412 |
| 92 | 92 | 0.47 |
| 93 | 93 | 0.999 |
| 94 | 94 | 0.341 |
| 95 | 95 | 0.802 |
| 96 | 96 | 0.909 |
| 97 | 97 | 0.54 |
| 98 | 98 | 0.31 |
| 99 | 99 | 0.382 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10654
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010047 human tonsil - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002372 (tonsil)
0006562 (pharynx)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0000344 (mucosa)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004923 (organ component layer)
0004921 (subdivision of digestive tract)
0000161 (orifice)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0001961 (mucosa-associated lymphoid tissue)
0001744 (lymphoid tissue)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001004 (respiratory system)
0002465 (lymphoid system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0000166 (oral opening)
0001042 (chordate pharynx)
0002193 (hemolymphoid system)
0002405 (immune system)
0001735 (tonsillar ring)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010047 (human tonsil - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
