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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002331,UBERON:0000926,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0001062,UBERON:0000478,UBERON:0005291,UBERON:0006598,UBERON:0002532,UBERON:0000358,UBERON:0000307,UBERON:0003081,UBERON:0000091,UBERON:0000087,UBERON:0006603,UBERON:0007806,UBERON:0008780,UBERON:0005728
|DRA_sample_Accession=CAGE@SAMD00004990
|accession_numbers=CAGE;DRX008755;DRR009627;DRZ001052;DRZ002437;DRZ012402;DRZ013787
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002331,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0000478,UBERON:0010317
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010057
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr5:172662197..172662216,-!p1@NKX2-5!2.07!117.32!NKX2-5;;chr4:174451370..174451387,-!p1@HAND2!2.06!114.97!HAND2;;chr20:50179368..50179392,-!p2@NFATC2!2.04!138.44!NFATC2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.99!96.20!PEG3;;chr19:46801639..46801699,+!p1@HIF3A!1.98!93.86!HIF3A;;chr1:40105299..40105326,-!p1@HEYL!1.88!75.09!HEYL;;chr12:52437488..52437507,+!p2@NR4A1!1.76!56.31!NR4A1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.64!42.24!HOXC5;;chr4:57547454..57547469,-!p1@HOPX!1.64!42.24!HOPX;;chr20:62680984..62680999,-!p1@SOX18!1.63!53.97!SOX18;;chr4:111544219..111544240,-!p1@PITX2!1.59!37.54!PITX2;;chr8:11561684..11561751,+!p1@GATA4!1.56!35.20!GATA4;;chr1:201979703..201979721,+!p2@ELF3!1.53!32.85!ELF3;;chr7:35293685..35293718,-!p1@TBX20!1.46!28.16!TBX20;;chr19:45971246..45971265,+!p1@FOSB!1.45!488.05!FOSB;;chr15:42749722..42749739,-!p2@ZFP106!1.44!46.93!ZFP106;;chr1:201979743..201979762,+!p1@ELF3!1.43!25.81!ELF3;;chr4:111558135..111558198,-!p2@PITX2!1.43!25.81!PITX2;;chr4:174451350..174451363,-!p3@HAND2!1.43!25.81!HAND2;;chr18:19749541..19749557,+!p1@GATA6!1.42!77.43!GATA6;;chr20:30433396..30433414,-!p1@FOXS1!1.39!23.46!FOXS1;;chr14:105935396..105935413,+!p4@MTA1!1.39!23.46!MTA1;;chr6:126070769..126070801,+!p1@HEY2!1.37!25.81!HEY2;;chr11:113930425..113930471,+!p1@ZBTB16!1.35!30.50!ZBTB16;;chr8:106330656..106330684,+!p1@ZFPM2!1.34!53.97!ZFPM2;;chr6:134210243..134210257,+!p1@TCF21!1.34!21.12!TCF21;;chr4:174450089..174450153,-!p2@HAND2!1.34!21.12!HAND2;;chr18:19749386..19749404,+!p2@GATA6!1.32!28.16!GATA6;;chr6:19837592..19837621,+!p1@ID4!1.31!114.97!ID4;;chr16:73093174..73093209,-!p3@ZFHX3!1.31!25.81!ZFHX3;;chr5:158526917..158526932,-!p1@EBF1!1.30!46.93!EBF1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.30!18.77!SEBOX;;chr2:176969228..176969260,+!p1@HOXD11!1.30!18.77!HOXD11;;chr10:119302232..119302265,+!p1@EMX2!1.30!18.77!EMX2;;chr11:47400078..47400106,-!p1@SPI1!1.30!18.77!SPI1;;chr14:38064429..38064486,-!p1@FOXA1!1.30!18.77!FOXA1;;chr14:75745523..75745537,+!p1@FOS!1.27!2029.64!FOS;;chr11:46299539..46299620,+!p2@CREB3L1!1.25!28.16!CREB3L1;;chr10:119303078..119303169,+!p2@EMX2!1.24!16.42!EMX2;;chr11:34642612..34642646,+!p1@EHF!1.24!16.42!EHF;;chr4:57522598..57522664,-!p3@HOPX!1.24!16.42!HOPX;;chrY:21906594..21906622,-!p1@KDM5D!1.24!16.42!KDM5D;;chr6:144289132..144289134,-!p3@PLAGL1!1.21!35.20!PLAGL1;;chr6:144329384..144329405,-!p1@PLAGL1!1.19!164.25!PLAGL1;;chr16:54320617..54320643,-!p3@IRX3!1.19!18.77!IRX3;;chr18:53068911..53068935,-!p4@TCF4!1.19!16.42!TCF4;;chr7:42276787..42276815,-!p1@GLI3!1.18!37.54!GLI3;;chr5:158527104..158527135,-!p4@EBF1!1.18!14.08!EBF1;;chr8:102504979..102505010,+!p2@GRHL2!1.18!14.08!GRHL2;;chr19:46800289..46800327,+!p2@HIF3A!1.18!14.08!HIF3A;;chr21:39870339..39870443,-!p1@ERG!1.18!14.08!ERG;;chr11:125034640..125034655,+!p1@PKNOX2!1.18!14.08!PKNOX2;;chr20:55204351..55204377,+!p1@TFAP2C!1.14!16.42!TFAP2C;;chr2:145277882..145277967,-!p3@ZEB2!1.12!21.12!ZEB2;;chr6:85474299..85474324,-!p1@TBX18!1.11!21.12!TBX18;;chr18:19749517..19749531,+!p3@GATA6!1.11!21.12!GATA6;;chr1:214161272..214161322,+!p1@PROX1!1.10!16.42!PROX1;;chr10:8096631..8096660,+!p1@GATA3!1.10!14.08!GATA3;;chr10:119302508..119302559,+!p5@EMX2!1.10!11.73!EMX2;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.73!ZBTB16;;chr12:54779511..54779577,-!p5@ZNF385A!1.10!11.73!ZNF385A;;chr5:2751762..2751784,-!p1@IRX2!1.10!11.73!IRX2;;chr5:50679228..50679288,+!p1@ISL1!1.10!11.73!ISL1;;chr6:34524093..34524135,-!p1@SPDEF!1.10!11.73!SPDEF;;chr8:25902876..25902936,-!p1@EBF2!1.10!11.73!EBF2;;chr8:93074803..93074845,-!p1@RUNX1T1!1.10!11.73!RUNX1T1;;chr2:119605214..119605230,-!p1@EN1!1.10!11.73!EN1;;chr1:209979411..209979433,-!p2@IRF6!1.10!11.73!IRF6;;chr17:48072574..48072597,-!p1@DLX3!1.10!11.73!DLX3;;chr5:137804484..137804498,+!p2@EGR1!1.08!44.58!EGR1;;chr14:75746722..75746777,+!p2@FOS!1.08!14.08!FOS;;chr12:24715376..24715432,-!p1@SOX5!1.08!14.08!SOX5;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.08!11.73!GLIS1;;chr16:79634624..79634642,-!p1@MAF!1.07!42.24!MAF;;chr19:33793430..33793447,-!p1@CEBPA!1.06!44.58!CEBPA;;chr16:79634595..79634620,-!p2@MAF!1.05!18.77!MAF;;chr3:12330560..12330579,+!p1@PPARG!1.05!11.73!PPARG;;chr6:1312325..1312340,+!p1@FOXQ1!1.04!16.42!FOXQ1;;chr11:46299199..46299233,+!p1@CREB3L1!1.02!49.27!CREB3L1;;chr10:119302268..119302282,+!p4@EMX2!1.02!9.39!EMX2;;chr11:129245526..129245553,+!p1@BARX2!1.02!9.39!BARX2;;chr11:65554528..65554546,+!p1@OVOL1!1.02!9.39!OVOL1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.02!9.39!HOXC5;;chr12:56414795..56414836,+!p4@IKZF4!1.02!9.39!IKZF4;;chr13:37494248..37494260,-!p3@SMAD9!1.02!9.39!SMAD9;;chr22:38380543..38380569,-!p1@SOX10!1.02!9.39!SOX10;;chr2:122042770..122042785,-!p1@TFCP2L1!1.02!9.39!TFCP2L1;;chr3:181429704..181429722,+!p1@SOX2!1.02!9.39!SOX2;;chr1:2985760..2985774,+!p1@PRDM16!1.02!9.39!PRDM16;;chr1:40367668..40367684,-!p2@MYCL1!1.02!9.39!MYCL1;;chr5:158527139..158527161,-!p5@EBF1!1.02!9.39!EBF1;;chr5:172662303..1726623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|expression_enrichment_score=chr5:172662197..172662216,-!p1@NKX2-5!2.07!117.32!NKX2-5;;chr4:174451370..174451387,-!p1@HAND2!2.06!114.97!HAND2;;chr20:50179368..50179392,-!p2@NFATC2!2.04!138.44!NFATC2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.99!96.20!PEG3;;chr19:46801639..46801699,+!p1@HIF3A!1.98!93.86!HIF3A;;chr1:40105299..40105326,-!p1@HEYL!1.88!75.09!HEYL;;chr12:52437488..52437507,+!p2@NR4A1!1.76!56.31!NR4A1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.64!42.24!HOXC5;;chr4:57547454..57547469,-!p1@HOPX!1.64!42.24!HOPX;;chr20:62680984..62680999,-!p1@SOX18!1.63!53.97!SOX18;;chr4:111544219..111544240,-!p1@PITX2!1.59!37.54!PITX2;;chr8:11561684..11561751,+!p1@GATA4!1.56!35.20!GATA4;;chr1:201979703..201979721,+!p2@ELF3!1.53!32.85!ELF3;;chr7:35293685..35293718,-!p1@TBX20!1.46!28.16!TBX20;;chr19:45971246..45971265,+!p1@FOSB!1.45!488.05!FOSB;;chr15:42749722..42749739,-!p2@ZFP106!1.44!46.93!ZFP106;;chr1:201979743..201979762,+!p1@ELF3!1.43!25.81!ELF3;;chr4:111558135..111558198,-!p2@PITX2!1.43!25.81!PITX2;;chr4:174451350..174451363,-!p3@HAND2!1.43!25.81!HAND2;;chr18:19749541..19749557,+!p1@GATA6!1.42!77.43!GATA6;;chr20:30433396..30433414,-!p1@FOXS1!1.39!23.46!FOXS1;;chr14:105935396..105935413,+!p4@MTA1!1.39!23.46!MTA1;;chr6:126070769..126070801,+!p1@HEY2!1.37!25.81!HEY2;;chr11:113930425..113930471,+!p1@ZBTB16!1.35!30.50!ZBTB16;;chr8:106330656..106330684,+!p1@ZFPM2!1.34!53.97!ZFPM2;;chr6:134210243..134210257,+!p1@TCF21!1.34!21.12!TCF21;;chr4:174450089..174450153,-!p2@HAND2!1.34!21.12!HAND2;;chr18:19749386..19749404,+!p2@GATA6!1.32!28.16!GATA6;;chr6:19837592..19837621,+!p1@ID4!1.31!114.97!ID4;;chr16:73093174..73093209,-!p3@ZFHX3!1.31!25.81!ZFHX3;;chr5:158526917..158526932,-!p1@EBF1!1.30!46.93!EBF1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.30!18.77!SEBOX;;chr2:176969228..176969260,+!p1@HOXD11!1.30!18.77!HOXD11;;chr10:119302232..119302265,+!p1@EMX2!1.30!18.77!EMX2;;chr11:47400078..47400106,-!p1@SPI1!1.30!18.77!SPI1;;chr14:38064429..38064486,-!p1@FOXA1!1.30!18.77!FOXA1;;chr14:75745523..75745537,+!p1@FOS!1.27!2029.64!FOS;;chr11:46299539..46299620,+!p2@CREB3L1!1.25!28.16!CREB3L1;;chr10:119303078..119303169,+!p2@EMX2!1.24!16.42!EMX2;;chr11:34642612..34642646,+!p1@EHF!1.24!16.42!EHF;;chr4:57522598..57522664,-!p3@HOPX!1.24!16.42!HOPX;;chrY:21906594..21906622,-!p1@KDM5D!1.24!16.42!KDM5D;;chr6:144289132..144289134,-!p3@PLAGL1!1.21!35.20!PLAGL1;;chr6:144329384..144329405,-!p1@PLAGL1!1.19!164.25!PLAGL1;;chr16:54320617..54320643,-!p3@IRX3!1.19!18.77!IRX3;;chr18:53068911..53068935,-!p4@TCF4!1.19!16.42!TCF4;;chr7:42276787..42276815,-!p1@GLI3!1.18!37.54!GLI3;;chr5:158527104..158527135,-!p4@EBF1!1.18!14.08!EBF1;;chr8:102504979..102505010,+!p2@GRHL2!1.18!14.08!GRHL2;;chr19:46800289..46800327,+!p2@HIF3A!1.18!14.08!HIF3A;;chr21:39870339..39870443,-!p1@ERG!1.18!14.08!ERG;;chr11:125034640..125034655,+!p1@PKNOX2!1.18!14.08!PKNOX2;;chr20:55204351..55204377,+!p1@TFAP2C!1.14!16.42!TFAP2C;;chr2:145277882..145277967,-!p3@ZEB2!1.12!21.12!ZEB2;;chr6:85474299..85474324,-!p1@TBX18!1.11!21.12!TBX18;;chr18:19749517..19749531,+!p3@GATA6!1.11!21.12!GATA6;;chr1:214161272..214161322,+!p1@PROX1!1.10!16.42!PROX1;;chr10:8096631..8096660,+!p1@GATA3!1.10!14.08!GATA3;;chr10:119302508..119302559,+!p5@EMX2!1.10!11.73!EMX2;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.73!ZBTB16;;chr12:54779511..54779577,-!p5@ZNF385A!1.10!11.73!ZNF385A;;chr5:2751762..2751784,-!p1@IRX2!1.10!11.73!IRX2;;chr5:50679228..50679288,+!p1@ISL1!1.10!11.73!ISL1;;chr6:34524093..34524135,-!p1@SPDEF!1.10!11.73!SPDEF;;chr8:25902876..25902936,-!p1@EBF2!1.10!11.73!EBF2;;chr8:93074803..93074845,-!p1@RUNX1T1!1.10!11.73!RUNX1T1;;chr2:119605214..119605230,-!p1@EN1!1.10!11.73!EN1;;chr1:209979411..209979433,-!p2@IRF6!1.10!11.73!IRF6;;chr17:48072574..48072597,-!p1@DLX3!1.10!11.73!DLX3;;chr5:137804484..137804498,+!p2@EGR1!1.08!44.58!EGR1;;chr14:75746722..75746777,+!p2@FOS!1.08!14.08!FOS;;chr12:24715376..24715432,-!p1@SOX5!1.08!14.08!SOX5;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.08!11.73!GLIS1;;chr16:79634624..79634642,-!p1@MAF!1.07!42.24!MAF;;chr19:33793430..33793447,-!p1@CEBPA!1.06!44.58!CEBPA;;chr16:79634595..79634620,-!p2@MAF!1.05!18.77!MAF;;chr3:12330560..12330579,+!p1@PPARG!1.05!11.73!PPARG;;chr6:1312325..1312340,+!p1@FOXQ1!1.04!16.42!FOXQ1;;chr11:46299199..46299233,+!p1@CREB3L1!1.02!49.27!CREB3L1;;chr10:119302268..119302282,+!p4@EMX2!1.02!9.39!EMX2;;chr11:129245526..129245553,+!p1@BARX2!1.02!9.39!BARX2;;chr11:65554528..65554546,+!p1@OVOL1!1.02!9.39!OVOL1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.02!9.39!HOXC5;;chr12:56414795..56414836,+!p4@IKZF4!1.02!9.39!IKZF4;;chr13:37494248..37494260,-!p3@SMAD9!1.02!9.39!SMAD9;;chr22:38380543..38380569,-!p1@SOX10!1.02!9.39!SOX10;;chr2:122042770..122042785,-!p1@TFCP2L1!1.02!9.39!TFCP2L1;;chr3:181429704..181429722,+!p1@SOX2!1.02!9.39!SOX2;;chr1:2985760..2985774,+!p1@PRDM16!1.02!9.39!PRDM16;;chr1:40367668..40367684,-!p2@MYCL1!1.02!9.39!MYCL1;;chr5:158527139..158527161,-!p5@EBF1!1.02!9.39!EBF1;;chr5:172662303..1726623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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002331
|ffid_belonging_in_development=UBERON:0000358,UBERON:0002532,UBERON:0006603,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 35: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/umbilical%2520cord%252c%2520fetal%252c%2520donor1.CNhs11765.10057-101H3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/umbilical%2520cord%252c%2520fetal%252c%2520donor1.CNhs11765.10057-101H3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/umbilical%2520cord%252c%2520fetal%252c%2520donor1.CNhs11765.10057-101H3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/umbilical%2520cord%252c%2520fetal%252c%2520donor1.CNhs11765.10057-101H3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/umbilical%2520cord%252c%2520fetal%252c%2520donor1.CNhs11765.10057-101H3.hg38.nobarcode.ctss.bed.gz
|id=FF:10057-101H3
|id=FF:10057-101H3
|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010057
|is_a=EFO:0002091;;FF:0010057
|is_obsolete=
|library_id=CNhs11765
|library_id_phase_based=2:CNhs11765
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10057
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10057
|name=umbilical cord, fetal, donor1
|name=umbilical cord, fetal, donor1
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11765,LSID820,release009,COMPLETED
|profile_hcage=CNhs11765,LSID820,release009,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.27483329820609,0.431748925799174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602004353941654,0,0,0,0,0,0.657369468022025,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.34982407948288,0.476356999379311,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.0785085424223245,0.524579074618365,-0.0969923612426051,0,0,0.427235447405268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257147756972082,0.262289537309182,0,0,0.0271410517961841,-0.211197402695869,0,0,0,0,-0.0980353512377064,0.239186481344146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.0742802680084763,0.456226749412846,0,0,0,0,0,0
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|rna_box=101
|rna_box=101
|rna_catalog_number=Cat:RtHFN: Umbilical cor
|rna_catalog_number=Cat:RtHFN: Umbilical cor
Line 57: Line 79:
|rna_weight_ug=10
|rna_weight_ug=10
|sample_age=
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_line=
Line 69: Line 92:
|sample_ethnicity=A?
|sample_ethnicity=A?
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.24938088034506e-238!GO:0005737;cytoplasm;6.99755277611723e-195!GO:0044444;cytoplasmic part;9.11586745210381e-130!GO:0043226;organelle;6.56966241889374e-125!GO:0043229;intracellular organelle;1.09994820983142e-124!GO:0044422;organelle part;6.63977262546244e-102!GO:0044446;intracellular organelle part;2.04066486419296e-100!GO:0005515;protein binding;7.95552636010475e-99!GO:0043231;intracellular membrane-bound organelle;1.2576118175722e-96!GO:0043227;membrane-bound organelle;1.26785970016668e-96!GO:0032991;macromolecular complex;1.24741225352181e-70!GO:0005739;mitochondrion;3.00650310239355e-49!GO:0030529;ribonucleoprotein complex;1.21338830647201e-47!GO:0044238;primary metabolic process;6.55514300049415e-43!GO:0019538;protein metabolic process;6.5932750494421e-43!GO:0016043;cellular component organization and biogenesis;1.70582844583294e-42!GO:0043233;organelle lumen;1.10270569734549e-41!GO:0031974;membrane-enclosed lumen;1.10270569734549e-41!GO:0044237;cellular metabolic process;6.18422563088032e-41!GO:0043234;protein complex;1.70194915450706e-40!GO:0031090;organelle membrane;3.62690033423205e-40!GO:0003723;RNA binding;6.99601249916465e-39!GO:0044260;cellular macromolecule metabolic process;4.52026083855527e-37!GO:0044429;mitochondrial part;8.41539166045283e-37!GO:0043228;non-membrane-bound organelle;1.6303119744023e-36!GO:0043232;intracellular non-membrane-bound organelle;1.6303119744023e-36!GO:0043170;macromolecule metabolic process;2.24969884708192e-36!GO:0044267;cellular protein metabolic process;2.81191825904821e-35!GO:0031967;organelle envelope;1.10456246341771e-32!GO:0031975;envelope;1.4863828615851e-32!GO:0005840;ribosome;2.54982310427871e-32!GO:0044428;nuclear part;4.58730752299603e-32!GO:0005829;cytosol;2.6767182383759e-30!GO:0006412;translation;4.88948262546151e-30!GO:0015031;protein transport;1.04428905644409e-29!GO:0033036;macromolecule localization;1.08351249132085e-29!GO:0008104;protein localization;4.56087669645924e-28!GO:0045184;establishment of protein localization;6.14710354657186e-28!GO:0009058;biosynthetic process;7.51392210471363e-28!GO:0003735;structural constituent of ribosome;8.69599188172343e-28!GO:0046907;intracellular transport;9.94739561726731e-27!GO:0033279;ribosomal subunit;8.177762773655e-26!GO:0009059;macromolecule biosynthetic process;1.55571551750766e-25!GO:0005740;mitochondrial envelope;7.3096831765008e-25!GO:0044249;cellular biosynthetic process;1.21705895752857e-24!GO:0031966;mitochondrial membrane;1.6267044080747e-24!GO:0065003;macromolecular complex assembly;6.35105702871525e-24!GO:0022607;cellular component assembly;9.68318787352323e-24!GO:0019866;organelle inner membrane;2.3472520397995e-23!GO:0016071;mRNA metabolic process;4.82847573137487e-23!GO:0005743;mitochondrial inner membrane;5.36477373163961e-22!GO:0006886;intracellular protein transport;9.16758065484788e-22!GO:0005783;endoplasmic reticulum;3.66463527618385e-21!GO:0006119;oxidative phosphorylation;9.94019541024922e-21!GO:0008380;RNA splicing;1.08999631957939e-20!GO:0005634;nucleus;2.57268455330758e-20!GO:0008092;cytoskeletal protein binding;9.84720321911692e-20!GO:0006396;RNA processing;1.26577147192183e-19!GO:0006397;mRNA processing;2.12748412211942e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.92392773644936e-19!GO:0048770;pigment granule;8.31655888321639e-19!GO:0042470;melanosome;8.31655888321639e-19!GO:0044455;mitochondrial membrane part;1.81109949679615e-18!GO:0006996;organelle organization and biogenesis;2.48803228061672e-18!GO:0031981;nuclear lumen;3.31621868339358e-18!GO:0044445;cytosolic part;1.08323820384786e-17!GO:0005746;mitochondrial respiratory chain;2.03548150028254e-17!GO:0051641;cellular localization;2.15065156180685e-17!GO:0051649;establishment of cellular localization;7.26863126738398e-17!GO:0012505;endomembrane system;1.32957501381091e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.48769033534241e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.03283378149821e-15!GO:0003954;NADH dehydrogenase activity;1.03283378149821e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.03283378149821e-15!GO:0031980;mitochondrial lumen;1.58679676420127e-15!GO:0005759;mitochondrial matrix;1.58679676420127e-15!GO:0008134;transcription factor binding;2.62636545162087e-15!GO:0015629;actin cytoskeleton;4.40092828395077e-15!GO:0006457;protein folding;1.78404673287397e-14!GO:0005681;spliceosome;1.96017858484508e-14!GO:0005794;Golgi apparatus;3.81338119075063e-14!GO:0044432;endoplasmic reticulum part;7.59139481020121e-14!GO:0015935;small ribosomal subunit;1.21663240099494e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.52325301144057e-13!GO:0045271;respiratory chain complex I;1.52325301144057e-13!GO:0005747;mitochondrial respiratory chain complex I;1.52325301144057e-13!GO:0005856;cytoskeleton;2.22647361010512e-13!GO:0016192;vesicle-mediated transport;3.55400990735427e-13!GO:0003779;actin binding;3.55400990735427e-13!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.90857041300225e-13!GO:0015934;large ribosomal subunit;4.27998235241412e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.50272596098242e-13!GO:0022618;protein-RNA complex assembly;4.86478859234415e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.7519859510806e-13!GO:0042775;organelle ATP synthesis coupled electron transport;9.62674174986513e-13!GO:0042773;ATP synthesis coupled electron transport;9.62674174986513e-13!GO:0048523;negative regulation of cellular process;9.62674174986513e-13!GO:0048193;Golgi vesicle transport;1.50107553859682e-12!GO:0016462;pyrophosphatase activity;1.86860030767165e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.09717983587049e-12!GO:0008135;translation factor activity, nucleic acid binding;2.6331727212765e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;2.6331727212765e-12!GO:0017111;nucleoside-triphosphatase activity;4.71788020274946e-12!GO:0048519;negative regulation of biological process;6.99839929832704e-12!GO:0044265;cellular macromolecule catabolic process;7.0012230303124e-12!GO:0005654;nucleoplasm;1.52532969387071e-11!GO:0044449;contractile fiber part;1.71824371136703e-11!GO:0051186;cofactor metabolic process;2.75746209294853e-11!GO:0043292;contractile fiber;2.98161634015931e-11!GO:0030029;actin filament-based process;3.1679536346594e-11!GO:0006605;protein targeting;4.38997174033496e-11!GO:0000166;nucleotide binding;4.90124531866054e-11!GO:0044257;cellular protein catabolic process;7.92336470554898e-11!GO:0006461;protein complex assembly;9.24113609239358e-11!GO:0005788;endoplasmic reticulum lumen;9.89766094266875e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;1.02117384625179e-10!GO:0019941;modification-dependent protein catabolic process;1.82816426318116e-10!GO:0043632;modification-dependent macromolecule catabolic process;1.82816426318116e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.96646899458523e-10!GO:0006511;ubiquitin-dependent protein catabolic process;2.12498883620587e-10!GO:0030036;actin cytoskeleton organization and biogenesis;2.95134059474322e-10!GO:0008307;structural constituent of muscle;3.2491498358645e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.33516822857158e-10!GO:0051082;unfolded protein binding;4.25421454005879e-10!GO:0009057;macromolecule catabolic process;4.68960900989934e-10!GO:0030016;myofibril;8.30403232229448e-10!GO:0006512;ubiquitin cycle;9.28026708719164e-10!GO:0043285;biopolymer catabolic process;1.06818579224131e-09!GO:0044248;cellular catabolic process;1.21894037162896e-09!GO:0043283;biopolymer metabolic process;1.22625637966547e-09!GO:0044451;nucleoplasm part;1.28388315254416e-09!GO:0016874;ligase activity;1.40258615459886e-09!GO:0012501;programmed cell death;1.47483897031047e-09!GO:0030163;protein catabolic process;1.66378699570097e-09!GO:0009055;electron carrier activity;2.32589854492206e-09!GO:0008565;protein transporter activity;2.79240597698514e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.08672075851528e-09!GO:0005761;mitochondrial ribosome;3.08672075851528e-09!GO:0000313;organellar ribosome;3.08672075851528e-09!GO:0006915;apoptosis;3.16644896789162e-09!GO:0010467;gene expression;4.14819378464668e-09!GO:0006446;regulation of translational initiation;4.55858053419691e-09!GO:0005793;ER-Golgi intermediate compartment;4.70180145706041e-09!GO:0007010;cytoskeleton organization and biogenesis;4.7698532617242e-09!GO:0007517;muscle development;4.7698532617242e-09!GO:0031988;membrane-bound vesicle;5.93008866102867e-09!GO:0044420;extracellular matrix part;6.20462918153667e-09!GO:0008219;cell death;6.71992513568648e-09!GO:0016265;death;6.71992513568648e-09!GO:0006413;translational initiation;8.45019510347216e-09!GO:0031982;vesicle;8.45019510347216e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.62176787854548e-09!GO:0006732;coenzyme metabolic process;8.64364348704292e-09!GO:0003743;translation initiation factor activity;8.70380057797341e-09!GO:0005635;nuclear envelope;9.08037357348323e-09!GO:0016023;cytoplasmic membrane-bound vesicle;9.98635599664196e-09!GO:0003712;transcription cofactor activity;1.05778012058056e-08!GO:0008361;regulation of cell size;1.44400761898237e-08!GO:0031410;cytoplasmic vesicle;1.50366874912152e-08!GO:0016049;cell growth;1.53060388074992e-08!GO:0030017;sarcomere;2.38023014468492e-08!GO:0005581;collagen;3.83254582952932e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.20714620565907e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.08215233107287e-08!GO:0016564;transcription repressor activity;1.00247797061352e-07!GO:0005789;endoplasmic reticulum membrane;1.00490433248167e-07!GO:0006366;transcription from RNA polymerase II promoter;1.03268449580903e-07!GO:0009060;aerobic respiration;1.25417633817208e-07!GO:0019829;cation-transporting ATPase activity;1.3430861485884e-07!GO:0031965;nuclear membrane;1.42680010658988e-07!GO:0006913;nucleocytoplasmic transport;1.49274276747861e-07!GO:0043412;biopolymer modification;1.58506802342714e-07!GO:0045333;cellular respiration;1.75226228010669e-07!GO:0032553;ribonucleotide binding;2.42084787886937e-07!GO:0032555;purine ribonucleotide binding;2.42084787886937e-07!GO:0051169;nuclear transport;2.47914830527901e-07!GO:0006464;protein modification process;2.80106715059282e-07!GO:0015986;ATP synthesis coupled proton transport;3.17482796651973e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.17482796651973e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.23680861290144e-07!GO:0017038;protein import;3.23680861290144e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;3.23680861290144e-07!GO:0000375;RNA splicing, via transesterification reactions;3.23680861290144e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.23680861290144e-07!GO:0006163;purine nucleotide metabolic process;3.62776230993825e-07!GO:0001558;regulation of cell growth;4.24061555247956e-07!GO:0017076;purine nucleotide binding;4.60663436940662e-07!GO:0015980;energy derivation by oxidation of organic compounds;4.61673735374173e-07!GO:0006099;tricarboxylic acid cycle;4.89366687933122e-07!GO:0046356;acetyl-CoA catabolic process;4.89366687933122e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.10255580354868e-07!GO:0009150;purine ribonucleotide metabolic process;5.15723325483532e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.34336115245508e-07!GO:0051246;regulation of protein metabolic process;5.50508604583982e-07!GO:0005730;nucleolus;6.37016881618003e-07!GO:0006084;acetyl-CoA metabolic process;6.98794525616807e-07!GO:0016887;ATPase activity;7.14398570802259e-07!GO:0046034;ATP metabolic process;7.80184788088756e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.92015979062968e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.92015979062968e-07!GO:0009056;catabolic process;1.00376227396071e-06!GO:0009141;nucleoside triphosphate metabolic process;1.08459049695368e-06!GO:0006091;generation of precursor metabolites and energy;1.23388621212065e-06!GO:0043687;post-translational protein modification;1.39680987554063e-06!GO:0009259;ribonucleotide metabolic process;1.49154754070639e-06!GO:0051187;cofactor catabolic process;2.37140508414204e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.59469774711912e-06!GO:0009109;coenzyme catabolic process;2.61466887962286e-06!GO:0030120;vesicle coat;2.61466887962286e-06!GO:0030662;coated vesicle membrane;2.61466887962286e-06!GO:0003714;transcription corepressor activity;3.04984546938716e-06!GO:0043069;negative regulation of programmed cell death;3.30301966700656e-06!GO:0042802;identical protein binding;3.31746002593596e-06!GO:0007049;cell cycle;4.83021364280361e-06!GO:0009142;nucleoside triphosphate biosynthetic process;4.83021364280361e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.83021364280361e-06!GO:0031252;leading edge;4.93771509583427e-06!GO:0042623;ATPase activity, coupled;4.93771509583427e-06!GO:0043066;negative regulation of apoptosis;5.04350947205652e-06!GO:0004842;ubiquitin-protein ligase activity;6.5359100593008e-06!GO:0006754;ATP biosynthetic process;6.70788256426143e-06!GO:0006753;nucleoside phosphate metabolic process;6.70788256426143e-06!GO:0048475;coated membrane;6.9381144376654e-06!GO:0030117;membrane coat;6.9381144376654e-06!GO:0005768;endosome;7.33774005171877e-06!GO:0003924;GTPase activity;7.3454954502851e-06!GO:0031324;negative regulation of cellular metabolic process;7.36979730578932e-06!GO:0006164;purine nucleotide biosynthetic process;7.39299083774088e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.39299083774088e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.39299083774088e-06!GO:0008639;small protein conjugating enzyme activity;7.49716097790636e-06!GO:0044431;Golgi apparatus part;8.00770084425343e-06!GO:0045259;proton-transporting ATP synthase complex;8.57180140643013e-06!GO:0005773;vacuole;9.4143799159781e-06!GO:0006606;protein import into nucleus;1.00706175698614e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.10180929816725e-05!GO:0005583;fibrillar collagen;1.17694825760629e-05!GO:0016491;oxidoreductase activity;1.18204361186661e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.52179134446204e-05!GO:0009892;negative regulation of metabolic process;1.52732694579284e-05!GO:0051170;nuclear import;1.66210206883004e-05!GO:0006916;anti-apoptosis;1.6626724906818e-05!GO:0051789;response to protein stimulus;2.13318971328535e-05!GO:0006986;response to unfolded protein;2.13318971328535e-05!GO:0019787;small conjugating protein ligase activity;2.18714020930307e-05!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.21027769541963e-05!GO:0006259;DNA metabolic process;2.62773974657449e-05!GO:0044453;nuclear membrane part;2.68757787270138e-05!GO:0016604;nuclear body;2.76512314579874e-05!GO:0005798;Golgi-associated vesicle;2.76512314579874e-05!GO:0016044;membrane organization and biogenesis;2.91143507288123e-05!GO:0044262;cellular carbohydrate metabolic process;2.9886266861259e-05!GO:0005865;striated muscle thin filament;3.60246208907791e-05!GO:0042981;regulation of apoptosis;3.6975872430167e-05!GO:0009260;ribonucleotide biosynthetic process;3.75833939641106e-05!GO:0006793;phosphorus metabolic process;3.92109690235055e-05!GO:0006796;phosphate metabolic process;3.92109690235055e-05!GO:0043067;regulation of programmed cell death;4.64452859741114e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.76513787864003e-05!GO:0016607;nuclear speck;5.23546153676244e-05!GO:0005201;extracellular matrix structural constituent;6.2302070222638e-05!GO:0005741;mitochondrial outer membrane;6.29411340955456e-05!GO:0019867;outer membrane;6.44683901188378e-05!GO:0051128;regulation of cellular component organization and biogenesis;6.5468168825987e-05!GO:0016481;negative regulation of transcription;6.94055823720824e-05!GO:0040008;regulation of growth;7.00932783405916e-05!GO:0031968;organelle outer membrane;7.21492787760281e-05!GO:0005525;GTP binding;7.28744889436295e-05!GO:0030532;small nuclear ribonucleoprotein complex;8.85721853089273e-05!GO:0000323;lytic vacuole;9.03840390053132e-05!GO:0005764;lysosome;9.03840390053132e-05!GO:0032559;adenyl ribonucleotide binding;9.22613151534866e-05!GO:0006950;response to stress;9.83302043045767e-05!GO:0005912;adherens junction;9.94515704871493e-05!GO:0005524;ATP binding;0.000104346064395644!GO:0016879;ligase activity, forming carbon-nitrogen bonds;0.000108320873750744!GO:0006613;cotranslational protein targeting to membrane;0.000110777424038233!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000112810758619197!GO:0006979;response to oxidative stress;0.000118150281261558!GO:0045786;negative regulation of progression through cell cycle;0.000125918233840928!GO:0019899;enzyme binding;0.000137789279505294!GO:0022890;inorganic cation transmembrane transporter activity;0.000141179965103824!GO:0051188;cofactor biosynthetic process;0.000175373169523101!GO:0030554;adenyl nucleotide binding;0.000175373169523101!GO:0048471;perinuclear region of cytoplasm;0.000187205483470781!GO:0000139;Golgi membrane;0.000197204056937149!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000208493855857361!GO:0016310;phosphorylation;0.000216813989427786!GO:0030133;transport vesicle;0.00025211697070791!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000252267146894057!GO:0031589;cell-substrate adhesion;0.000257962279315253!GO:0030308;negative regulation of cell growth;0.000268589802085008!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000271556260690182!GO:0000245;spliceosome assembly;0.000274360924628314!GO:0045792;negative regulation of cell size;0.000292723963748723!GO:0051427;hormone receptor binding;0.000325911474852614!GO:0016853;isomerase activity;0.000331026801878535!GO:0005578;proteinaceous extracellular matrix;0.000336353621277391!GO:0005762;mitochondrial large ribosomal subunit;0.000356354638069783!GO:0000315;organellar large ribosomal subunit;0.000356354638069783!GO:0005839;proteasome core complex (sensu Eukaryota);0.000369766352958356!GO:0030867;rough endoplasmic reticulum membrane;0.000415567026310985!GO:0001666;response to hypoxia;0.000431255380547784!GO:0005643;nuclear pore;0.000437199406007405!GO:0016881;acid-amino acid ligase activity;0.000440492185421583!GO:0006752;group transfer coenzyme metabolic process;0.000449072113642794!GO:0005791;rough endoplasmic reticulum;0.000451613606544856!GO:0016859;cis-trans isomerase activity;0.000469286631029836!GO:0032561;guanyl ribonucleotide binding;0.000486797288900125!GO:0019001;guanyl nucleotide binding;0.000486797288900125!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000503026003237241!GO:0009117;nucleotide metabolic process;0.000521326068456018!GO:0008286;insulin receptor signaling pathway;0.000535365519705962!GO:0000074;regulation of progression through cell cycle;0.00054373650505084!GO:0019843;rRNA binding;0.000549463255693663!GO:0007005;mitochondrion organization and biogenesis;0.000551935039095597!GO:0005048;signal sequence binding;0.000577852346598401!GO:0031674;I band;0.000591598915353898!GO:0035257;nuclear hormone receptor binding;0.000628871156237457!GO:0001725;stress fiber;0.000632068872686514!GO:0032432;actin filament bundle;0.000632068872686514!GO:0033673;negative regulation of kinase activity;0.000688837820366211!GO:0006469;negative regulation of protein kinase activity;0.000688837820366211!GO:0016787;hydrolase activity;0.000705765793441256!GO:0065002;intracellular protein transport across a membrane;0.000715693850713802!GO:0051726;regulation of cell cycle;0.000720847678584764!GO:0014706;striated muscle development;0.000746161667569396!GO:0003012;muscle system process;0.000804162022251747!GO:0006936;muscle contraction;0.000804162022251747!GO:0007264;small GTPase mediated signal transduction;0.000809163889147085!GO:0003697;single-stranded DNA binding;0.000829373936094!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000829373936094!GO:0015399;primary active transmembrane transporter activity;0.000829373936094!GO:0050789;regulation of biological process;0.000850039593148273!GO:0016197;endosome transport;0.000857885262090053!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000857885262090053!GO:0004812;aminoacyl-tRNA ligase activity;0.000857885262090053!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000857885262090053!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000919896132284444!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000960238220764178!GO:0008654;phospholipid biosynthetic process;0.000963344109903211!GO:0004298;threonine endopeptidase activity;0.00105185790262745!GO:0043623;cellular protein complex assembly;0.00106430368211665!GO:0001944;vasculature development;0.00111160347312457!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00111160347312457!GO:0007160;cell-matrix adhesion;0.00124822488004014!GO:0009108;coenzyme biosynthetic process;0.00133714488738692!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00133714488738692!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00133714488738692!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00133714488738692!GO:0051920;peroxiredoxin activity;0.0013774345313193!GO:0048522;positive regulation of cellular process;0.0014679471631514!GO:0022402;cell cycle process;0.00149552865255445!GO:0030027;lamellipodium;0.00154036912141907!GO:0003713;transcription coactivator activity;0.00155742757704667!GO:0005770;late endosome;0.00156366921875051!GO:0000902;cell morphogenesis;0.00162277845628721!GO:0032989;cellular structure morphogenesis;0.00162277845628721!GO:0043021;ribonucleoprotein binding;0.00164547324319386!GO:0006941;striated muscle contraction;0.00166415882373055!GO:0051348;negative regulation of transferase activity;0.00166415882373055!GO:0001568;blood vessel development;0.00167422463968705!GO:0044430;cytoskeletal part;0.0016768454137647!GO:0045893;positive regulation of transcription, DNA-dependent;0.00168734100735313!GO:0043038;amino acid activation;0.0017266381856696!GO:0006418;tRNA aminoacylation for protein translation;0.0017266381856696!GO:0043039;tRNA aminoacylation;0.0017266381856696!GO:0045926;negative regulation of growth;0.0017882511752391!GO:0005913;cell-cell adherens junction;0.00179492221956515!GO:0008250;oligosaccharyl transferase complex;0.001828243791358!GO:0045892;negative regulation of transcription, DNA-dependent;0.00187962416755986!GO:0046930;pore complex;0.00191682819260313!GO:0005667;transcription factor complex;0.00198548636428238!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00205067064447454!GO:0043566;structure-specific DNA binding;0.00229699817800736!GO:0005586;collagen type III;0.00235109728339768!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00236888081299237!GO:0004576;oligosaccharyl transferase activity;0.00238529900532988!GO:0033116;ER-Golgi intermediate compartment membrane;0.00242343783299085!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00252127991770086!GO:0030663;COPI coated vesicle membrane;0.0026147107359551!GO:0030126;COPI vesicle coat;0.0026147107359551!GO:0006333;chromatin assembly or disassembly;0.00270913126332933!GO:0016563;transcription activator activity;0.00272567505381117!GO:0043284;biopolymer biosynthetic process;0.00282403424691459!GO:0043492;ATPase activity, coupled to movement of substances;0.00282403424691459!GO:0045941;positive regulation of transcription;0.00285360237882296!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00285736029908028!GO:0048518;positive regulation of biological process;0.00287074962293481!GO:0006891;intra-Golgi vesicle-mediated transport;0.00287800083288161!GO:0007167;enzyme linked receptor protein signaling pathway;0.00305671061749381!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00310372507671833!GO:0035258;steroid hormone receptor binding;0.00311004377187117!GO:0051270;regulation of cell motility;0.00312345279525293!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00313578520714555!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00317889529273175!GO:0060047;heart contraction;0.00319276077438872!GO:0003015;heart process;0.00319276077438872!GO:0022415;viral reproductive process;0.00332323252495938!GO:0005885;Arp2/3 protein complex;0.00333661366100976!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00336653398577418!GO:0033043;regulation of organelle organization and biogenesis;0.00336653398577418!GO:0008610;lipid biosynthetic process;0.00340026824150277!GO:0006897;endocytosis;0.00347179246376297!GO:0010324;membrane invagination;0.00347179246376297!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00349976135201473!GO:0051329;interphase of mitotic cell cycle;0.00361841947398321!GO:0005769;early endosome;0.00369829583371121!GO:0050657;nucleic acid transport;0.00369829583371121!GO:0051236;establishment of RNA localization;0.00369829583371121!GO:0050658;RNA transport;0.00369829583371121!GO:0030018;Z disc;0.00378065130646907!GO:0031032;actomyosin structure organization and biogenesis;0.00384137032982388!GO:0030132;clathrin coat of coated pit;0.00388122862439592!GO:0048468;cell development;0.00399656782170554!GO:0006403;RNA localization;0.00419902824162452!GO:0045454;cell redox homeostasis;0.00429161583195193!GO:0051325;interphase;0.00451875380096744!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00455173127549887!GO:0044440;endosomal part;0.00456189863589248!GO:0010008;endosome membrane;0.00456189863589248!GO:0006323;DNA packaging;0.00464672554937423!GO:0000314;organellar small ribosomal subunit;0.00467439550258813!GO:0005763;mitochondrial small ribosomal subunit;0.00467439550258813!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00471046922690048!GO:0005905;coated pit;0.00471147416706267!GO:0042692;muscle cell differentiation;0.00473666095221892!GO:0032446;protein modification by small protein conjugation;0.00473889178278054!GO:0043488;regulation of mRNA stability;0.00487354091880043!GO:0043487;regulation of RNA stability;0.00487354091880043!GO:0030934;anchoring collagen;0.00494493209840961!GO:0009719;response to endogenous stimulus;0.00495608777935629!GO:0004860;protein kinase inhibitor activity;0.00509328297893234!GO:0006818;hydrogen transport;0.00522746687214812!GO:0003746;translation elongation factor activity;0.00536310802058098!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00537530217775586!GO:0016567;protein ubiquitination;0.00537530217775586!GO:0065004;protein-DNA complex assembly;0.00549162790065546!GO:0015630;microtubule cytoskeleton;0.00555240630121998!GO:0001516;prostaglandin biosynthetic process;0.00559277428102396!GO:0046457;prostanoid biosynthetic process;0.00559277428102396!GO:0030137;COPI-coated vesicle;0.00567809605842639!GO:0051252;regulation of RNA metabolic process;0.00569021573338807!GO:0000785;chromatin;0.00571433922145628!GO:0015992;proton transport;0.00575287079691609!GO:0000151;ubiquitin ligase complex;0.00579203018241951!GO:0030100;regulation of endocytosis;0.00592607492388863!GO:0007015;actin filament organization;0.00603156650447525!GO:0017166;vinculin binding;0.00608377420542544!GO:0006334;nucleosome assembly;0.00620917541403587!GO:0001726;ruffle;0.00673176833993438!GO:0040012;regulation of locomotion;0.00674935636547626!GO:0040011;locomotion;0.00675343688957088!GO:0006892;post-Golgi vesicle-mediated transport;0.00694725323655523!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00733740534938324!GO:0045445;myoblast differentiation;0.00733740534938324!GO:0030659;cytoplasmic vesicle membrane;0.00771522994346463!GO:0004386;helicase activity;0.00783135378207257!GO:0030658;transport vesicle membrane;0.00783135378207257!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00795109341765409!GO:0008154;actin polymerization and/or depolymerization;0.0081117694240467!GO:0006974;response to DNA damage stimulus;0.00820238525361039!GO:0008016;regulation of heart contraction;0.00835151622005972!GO:0006414;translational elongation;0.00843451949157575!GO:0007050;cell cycle arrest;0.00848636537772944!GO:0046983;protein dimerization activity;0.00848636537772944!GO:0003724;RNA helicase activity;0.00848636537772944!GO:0030118;clathrin coat;0.00872347549527863!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00883011855181939!GO:0048659;smooth muscle cell proliferation;0.00907938618735545!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00907938618735545!GO:0015002;heme-copper terminal oxidase activity;0.00907938618735545!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00907938618735545!GO:0004129;cytochrome-c oxidase activity;0.00907938618735545!GO:0030134;ER to Golgi transport vesicle;0.00911381632969753!GO:0019752;carboxylic acid metabolic process;0.00930630884449534!GO:0048500;signal recognition particle;0.00933536977973666!GO:0005861;troponin complex;0.00936771866434618!GO:0050794;regulation of cellular process;0.00977981697829402!GO:0030127;COPII vesicle coat;0.00977981697829402!GO:0012507;ER to Golgi transport vesicle membrane;0.00977981697829402!GO:0050811;GABA receptor binding;0.00994700315904772!GO:0007243;protein kinase cascade;0.00996362154461281!GO:0042254;ribosome biogenesis and assembly;0.0100765042440935!GO:0051287;NAD binding;0.0100983410210383!GO:0006007;glucose catabolic process;0.0102350071791408!GO:0007519;skeletal muscle development;0.0102511518613472!GO:0006082;organic acid metabolic process;0.0103284899063219!GO:0008026;ATP-dependent helicase activity;0.0108656247463486!GO:0048514;blood vessel morphogenesis;0.0112460189869521!GO:0012506;vesicle membrane;0.0113732878017627!GO:0016529;sarcoplasmic reticulum;0.0114076307651549!GO:0016528;sarcoplasm;0.0114076307651549!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0115158486821539!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0115158486821539!GO:0019318;hexose metabolic process;0.0115227662391804!GO:0006635;fatty acid beta-oxidation;0.0117031073729883!GO:0005604;basement membrane;0.0117866061803693!GO:0006612;protein targeting to membrane;0.0118087481285171!GO:0030660;Golgi-associated vesicle membrane;0.01202719307807!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0121047460010917!GO:0032535;regulation of cellular component size;0.0121969921769374!GO:0005869;dynactin complex;0.012307123863978!GO:0003729;mRNA binding;0.012472704853107!GO:0001527;microfibril;0.0126371423786529!GO:0005924;cell-substrate adherens junction;0.0127707151248202!GO:0030832;regulation of actin filament length;0.0129173079404715!GO:0051276;chromosome organization and biogenesis;0.0129222449531287!GO:0043681;protein import into mitochondrion;0.013019226185629!GO:0048660;regulation of smooth muscle cell proliferation;0.0130290273943199!GO:0030518;steroid hormone receptor signaling pathway;0.0136680696016931!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0137049561755939!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0137294624859802!GO:0017022;myosin binding;0.0138343576181861!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0143220512679889!GO:0016860;intramolecular oxidoreductase activity;0.0144026910648384!GO:0006937;regulation of muscle contraction;0.0146702034365888!GO:0001525;angiogenesis;0.0146785955014097!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0148920975044944!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0151983961284973!GO:0051674;localization of cell;0.0152833016704295!GO:0006928;cell motility;0.0152833016704295!GO:0018196;peptidyl-asparagine modification;0.0155592868908162!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0155592868908162!GO:0031497;chromatin assembly;0.0155592868908162!GO:0030674;protein binding, bridging;0.0155678536638498!GO:0031072;heat shock protein binding;0.015791890404682!GO:0043034;costamere;0.0158569610107476!GO:0042805;actinin binding;0.0160089926285169!GO:0005975;carbohydrate metabolic process;0.0160186609754028!GO:0000278;mitotic cell cycle;0.0160186609754028!GO:0030055;cell-matrix junction;0.0160186609754028!GO:0005100;Rho GTPase activator activity;0.0160367029730544!GO:0051028;mRNA transport;0.0165312655974579!GO:0048644;muscle morphogenesis;0.0168629444082447!GO:0055008;cardiac muscle morphogensis;0.0168629444082447!GO:0016126;sterol biosynthetic process;0.0168783218505648!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0170093226132318!GO:0065007;biological regulation;0.0170547851282825!GO:0005938;cell cortex;0.0175582633498075!GO:0007265;Ras protein signal transduction;0.0178112608589869!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0181003656577007!GO:0005916;fascia adherens;0.0183981458128695!GO:0008139;nuclear localization sequence binding;0.0184717091496107!GO:0030521;androgen receptor signaling pathway;0.0186376107847748!GO:0044433;cytoplasmic vesicle part;0.0188899794170332!GO:0051087;chaperone binding;0.0192699033660079!GO:0006693;prostaglandin metabolic process;0.0193041744437207!GO:0006692;prostanoid metabolic process;0.0193041744437207!GO:0031901;early endosome membrane;0.019591037097883!GO:0009165;nucleotide biosynthetic process;0.0201502822460306!GO:0045098;type III intermediate filament;0.0207343514328808!GO:0008287;protein serine/threonine phosphatase complex;0.0207587409547955!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.020866863684873!GO:0045047;protein targeting to ER;0.020866863684873!GO:0006633;fatty acid biosynthetic process;0.0210464651776009!GO:0051101;regulation of DNA binding;0.0218808982775271!GO:0006942;regulation of striated muscle contraction;0.0226023732703267!GO:0005996;monosaccharide metabolic process;0.0226816747834884!GO:0019210;kinase inhibitor activity;0.0229236240663364!GO:0006006;glucose metabolic process;0.0229638889504096!GO:0006607;NLS-bearing substrate import into nucleus;0.0229662933736602!GO:0000059;protein import into nucleus, docking;0.0231007229649286!GO:0044255;cellular lipid metabolic process;0.023471137989629!GO:0030218;erythrocyte differentiation;0.0235754030604094!GO:0030334;regulation of cell migration;0.0239157428186124!GO:0005083;small GTPase regulator activity;0.0241100035982354!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0242944785067394!GO:0030176;integral to endoplasmic reticulum membrane;0.0252711688901554!GO:0015631;tubulin binding;0.0253580463734741!GO:0008283;cell proliferation;0.0253987871924341!GO:0051146;striated muscle cell differentiation;0.0253987871924341!GO:0045936;negative regulation of phosphate metabolic process;0.0254283795966427!GO:0030119;AP-type membrane coat adaptor complex;0.0254283795966427!GO:0009081;branched chain family amino acid metabolic process;0.0254283795966427!GO:0046474;glycerophospholipid biosynthetic process;0.0256393952341773!GO:0019079;viral genome replication;0.0258319718557687!GO:0009966;regulation of signal transduction;0.0260476567369752!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0262377268339292!GO:0005813;centrosome;0.0262941286303116!GO:0051098;regulation of binding;0.0264759508784337!GO:0045045;secretory pathway;0.0267185475819685!GO:0015036;disulfide oxidoreductase activity;0.0274905298643799!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0275587213253214!GO:0006508;proteolysis;0.0275628219930185!GO:0030049;muscle filament sliding;0.0281386726750942!GO:0033275;actin-myosin filament sliding;0.0281386726750942!GO:0050681;androgen receptor binding;0.0287884680626545!GO:0008147;structural constituent of bone;0.0299587679440908!GO:0055001;muscle cell development;0.0299587679440908!GO:0030239;myofibril assembly;0.0299587679440908!GO:0055002;striated muscle cell development;0.0299587679440908!GO:0007266;Rho protein signal transduction;0.0299587679440908!GO:0043022;ribosome binding;0.0308109678332956!GO:0014866;skeletal myofibril assembly;0.030920180984899!GO:0005862;muscle thin filament tropomyosin;0.0312809327895593!GO:0007030;Golgi organization and biogenesis;0.0312809327895593!GO:0007507;heart development;0.0317753045424106!GO:0005584;collagen type I;0.0319432241566183!GO:0006595;polyamine metabolic process;0.0321132607056507!GO:0046426;negative regulation of JAK-STAT cascade;0.0326583608766301!GO:0051235;maintenance of localization;0.0327324892660553!GO:0030172;troponin C binding;0.0329360367576925!GO:0007006;mitochondrial membrane organization and biogenesis;0.0329360367576925!GO:0035035;histone acetyltransferase binding;0.0339630280988613!GO:0030131;clathrin adaptor complex;0.0344669188646901!GO:0030198;extracellular matrix organization and biogenesis;0.0347947683261514!GO:0004111;creatine kinase activity;0.0355295802250291!GO:0030031;cell projection biogenesis;0.0356912764099804!GO:0030041;actin filament polymerization;0.0358121692799955!GO:0005200;structural constituent of cytoskeleton;0.0360792193773091!GO:0006096;glycolysis;0.0365536234750933!GO:0005684;U2-dependent spliceosome;0.0367241326846605!GO:0005637;nuclear inner membrane;0.03673903510979!GO:0004448;isocitrate dehydrogenase activity;0.0372169469186197!GO:0030522;intracellular receptor-mediated signaling pathway;0.037622719344186!GO:0006260;DNA replication;0.0383766314556449!GO:0005925;focal adhesion;0.0387577864789903!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0399958499897471!GO:0019058;viral infectious cycle;0.0401812333774625!GO:0031625;ubiquitin protein ligase binding;0.0403704015452254!GO:0003690;double-stranded DNA binding;0.0405493336762568!GO:0016584;nucleosome positioning;0.0408664325922124!GO:0031124;mRNA 3'-end processing;0.0413050291371465!GO:0005832;chaperonin-containing T-complex;0.041722338745371!GO:0006839;mitochondrial transport;0.042468800174979!GO:0048487;beta-tubulin binding;0.0426698649294469!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0432283917148294!GO:0019208;phosphatase regulator activity;0.0435107253049119!GO:0000082;G1/S transition of mitotic cell cycle;0.0436682462155885!GO:0003676;nucleic acid binding;0.0438065977189791!GO:0042326;negative regulation of phosphorylation;0.0438529832083146!GO:0005518;collagen binding;0.0442467107296931!GO:0016272;prefoldin complex;0.0456654906112724!GO:0046394;carboxylic acid biosynthetic process;0.0460414232027609!GO:0016053;organic acid biosynthetic process;0.0460414232027609!GO:0007028;cytoplasm organization and biogenesis;0.0460414232027609!GO:0048251;elastic fiber assembly;0.0467402195439235!GO:0005521;lamin binding;0.047069968520062!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.0475158925624635!GO:0006281;DNA repair;0.04772868658875!GO:0045663;positive regulation of myoblast differentiation;0.0480663641699097!GO:0005694;chromosome;0.0486073870655989!GO:0032780;negative regulation of ATPase activity;0.0487859013262186!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0490676582555919!GO:0031543;peptidyl-proline dioxygenase activity;0.0491614663303005!GO:0008047;enzyme activator activity;0.0497825773145418
|sample_id=10057
|sample_id=10057
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=umbilical cord
|sample_tissue=umbilical cord
|top_motifs=TBP:4.41655543587;SRF:3.76166410562;MEF2{A,B,C,D}:3.51728702547;NR5A1,2:2.99200778611;RXRA_VDR{dimer}:2.43995913892;TFAP4:2.43584921547;NFE2L1:2.27627030121;MAFB:2.22437039523;GATA4:2.18393483382;ESR1:2.12886942792;SPZ1:2.12473612535;SMAD1..7,9:2.12266663009;GCM1,2:2.04228641492;GLI1..3:1.97296605673;NR1H4:1.91414844576;NR3C1:1.91060036648;NR6A1:1.8872516527;HOX{A4,D4}:1.85020135538;ZNF423:1.8266556914;TFCP2:1.80204616159;TFAP2{A,C}:1.78137872057;IKZF1:1.7067461301;TEAD1:1.67316672777;MYBL2:1.58990863455;KLF4:1.58767864337;GATA6:1.46207806635;FOXL1:1.45488020301;NKX3-1:1.43407152884;XBP1:1.42852839902;AR:1.42298595322;TBX4,5:1.38802814777;TAL1_TCF{3,4,12}:1.34276243999;ZNF238:1.30523928928;ZNF384:1.30390932958;ESRRA:1.27198155422;RORA:1.2646221095;TOPORS:1.24128238353;SOX5:1.18367056696;FOXA2:1.15863833634;SNAI1..3:1.15664362104;GTF2A1,2:1.13077640295;FOXM1:1.1228767854;PRDM1:1.11923651628;HAND1,2:1.07039253853;FOX{I1,J2}:1.06751125944;IKZF2:1.05545137533;TEF:1.05491058248;NKX3-2:0.997695381277;NFATC1..3:0.963800977467;LHX3,4:0.945877062846;UFEwm:0.935476735468;PATZ1:0.911759107123;MZF1:0.901124897733;MAZ:0.878657903973;HIC1:0.874839319568;ZEB1:0.869135959415;GTF2I:0.85910067734;MTE{core}:0.818377664437;PAX5:0.804767291335;ZIC1..3:0.804633325176;HOXA9_MEIS1:0.800020643835;TLX1..3_NFIC{dimer}:0.799529173534;FOXO1,3,4:0.771298678072;ZNF148:0.746064380468;MED-1{core}:0.728189114419;HOX{A5,B5}:0.713872602235;FOX{D1,D2}:0.70323352897;RREB1:0.69516820886;RBPJ:0.630892752568;LMO2:0.63022323371;T:0.602994772798;MYOD1:0.588696258791;ATF6:0.55158946569;NANOG{mouse}:0.537391098322;FOXD3:0.532114666051;TP53:0.52515536712;HMGA1,2:0.50181674522;NHLH1,2:0.500456522883;NKX2-1,4:0.496239940261;TGIF1:0.48913594415;PPARG:0.485303077237;ATF2:0.460882158714;CDC5L:0.45303700166;EBF1:0.447460404137;GFI1B:0.438574320375;MYFfamily:0.430195297604;SP1:0.415850795638;MTF1:0.406593935474;VSX1,2:0.39627490105;SOX17:0.395538197216;HNF1A:0.378433724663;NKX2-3_NKX2-5:0.37533238836;EVI1:0.354581037891;FOXP3:0.342461575822;YY1:0.334202134308;STAT2,4,6:0.331407548768;REST:0.327164345147;HMX1:0.286983647694;TLX2:0.272339137806;GZF1:0.263564831164;AIRE:0.25075011442;EP300:0.244018192042;NANOG:0.239368407283;BPTF:0.228670965356;FOXP1:0.206625139964;TFAP2B:0.190692395575;ZBTB16:0.172757899914;EGR1..3:0.157983284502;HBP1_HMGB_SSRP1_UBTF:0.152106739009;CDX1,2,4:0.1181226071;ALX4:0.108500105936;BREu{core}:0.101828821786;PAX1,9:0.0858097429529;JUN:0.0211445821895;XCPE1{core}:0.0148960233535;FOSL2:-0.005081830512;HNF4A_NR2F1,2:-0.0301648816181;GFI1:-0.0395397882293;PBX1:-0.0488409526492;LEF1_TCF7_TCF7L1,2:-0.0562116088951;SOX2:-0.0577005174313;POU6F1:-0.0588742847646;HLF:-0.0683161909823;CUX2:-0.08984917529;POU5F1:-0.176412395526;HOX{A6,A7,B6,B7}:-0.189358796017;ATF4:-0.209093347778;ARID5B:-0.221728448018;SOX{8,9,10}:-0.233065077414;DBP:-0.235350362795;PAX6:-0.258022765919;RXR{A,B,G}:-0.262104597575;RFX1:-0.291939750321;ALX1:-0.302783569257;IRF7:-0.303126073001;HIF1A:-0.304170046358;PITX1..3:-0.33150370842;ETS1,2:-0.344732836855;FOS_FOS{B,L1}_JUN{B,D}:-0.355596419246;FOXQ1:-0.407959304214;NKX2-2,8:-0.411231843733;SPI1:-0.42238104508;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.422695959533;NFIX:-0.432815600562;PRRX1,2:-0.435280120343;FOX{F1,F2,J1}:-0.461434137682;ADNP_IRX_SIX_ZHX:-0.475006902528;NKX6-1,2:-0.4990160481;HES1:-0.500151165744;HSF1,2:-0.503157932754;TFDP1:-0.511189768304;ZFP161:-0.513642426102;NFE2:-0.515912900516;PAX2:-0.527554598163;EN1,2:-0.530060619225;SPIB:-0.547204276;POU3F1..4:-0.553450660743;NFE2L2:-0.555567811805;IRF1,2:-0.560393480039;RUNX1..3:-0.564944727762;BACH2:-0.590435338566;NFKB1_REL_RELA:-0.607821399683;PAX4:-0.641698259148;E2F1..5:-0.642705415499;NFY{A,B,C}:-0.671172461433;FOXN1:-0.689452066137;CEBPA,B_DDIT3:-0.759487148804;ATF5_CREB3:-0.793186001781;ZBTB6:-0.80809790431;AHR_ARNT_ARNT2:-0.828837840236;CREB1:-0.884910379145;POU2F1..3:-0.889854815077;RFX2..5_RFXANK_RFXAP:-0.906720768842;ONECUT1,2:-0.923723003402;POU1F1:-0.927223502968;SREBF1,2:-0.946853501306;DMAP1_NCOR{1,2}_SMARC:-0.947751397355;ZNF143:-0.997639698995;NFIL3:-0.999577248001;STAT1,3:-1.05247657148;bHLH_family:-1.09587830014;PDX1:-1.10440764508;NRF1:-1.11430209841;ELF1,2,4:-1.23169290126;MYB:-1.2420886172;CRX:-1.27060556326;OCT4_SOX2{dimer}:-1.30091331063;STAT5{A,B}:-1.65136653854;PAX3,7:-2.06458251531;PAX8:-2.1309293705;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.59122467763;ELK1,4_GABP{A,B1}:-2.80999645724
|top_motifs=TBP:4.41655543587;SRF:3.76166410562;MEF2{A,B,C,D}:3.51728702547;NR5A1,2:2.99200778611;RXRA_VDR{dimer}:2.43995913892;TFAP4:2.43584921547;NFE2L1:2.27627030121;MAFB:2.22437039523;GATA4:2.18393483382;ESR1:2.12886942792;SPZ1:2.12473612535;SMAD1..7,9:2.12266663009;GCM1,2:2.04228641492;GLI1..3:1.97296605673;NR1H4:1.91414844576;NR3C1:1.91060036648;NR6A1:1.8872516527;HOX{A4,D4}:1.85020135538;ZNF423:1.8266556914;TFCP2:1.80204616159;TFAP2{A,C}:1.78137872057;IKZF1:1.7067461301;TEAD1:1.67316672777;MYBL2:1.58990863455;KLF4:1.58767864337;GATA6:1.46207806635;FOXL1:1.45488020301;NKX3-1:1.43407152884;XBP1:1.42852839902;AR:1.42298595322;TBX4,5:1.38802814777;TAL1_TCF{3,4,12}:1.34276243999;ZNF238:1.30523928928;ZNF384:1.30390932958;ESRRA:1.27198155422;RORA:1.2646221095;TOPORS:1.24128238353;SOX5:1.18367056696;FOXA2:1.15863833634;SNAI1..3:1.15664362104;GTF2A1,2:1.13077640295;FOXM1:1.1228767854;PRDM1:1.11923651628;HAND1,2:1.07039253853;FOX{I1,J2}:1.06751125944;IKZF2:1.05545137533;TEF:1.05491058248;NKX3-2:0.997695381277;NFATC1..3:0.963800977467;LHX3,4:0.945877062846;UFEwm:0.935476735468;PATZ1:0.911759107123;MZF1:0.901124897733;MAZ:0.878657903973;HIC1:0.874839319568;ZEB1:0.869135959415;GTF2I:0.85910067734;MTE{core}:0.818377664437;PAX5:0.804767291335;ZIC1..3:0.804633325176;HOXA9_MEIS1:0.800020643835;TLX1..3_NFIC{dimer}:0.799529173534;FOXO1,3,4:0.771298678072;ZNF148:0.746064380468;MED-1{core}:0.728189114419;HOX{A5,B5}:0.713872602235;FOX{D1,D2}:0.70323352897;RREB1:0.69516820886;RBPJ:0.630892752568;LMO2:0.63022323371;T:0.602994772798;MYOD1:0.588696258791;ATF6:0.55158946569;NANOG{mouse}:0.537391098322;FOXD3:0.532114666051;TP53:0.52515536712;HMGA1,2:0.50181674522;NHLH1,2:0.500456522883;NKX2-1,4:0.496239940261;TGIF1:0.48913594415;PPARG:0.485303077237;ATF2:0.460882158714;CDC5L:0.45303700166;EBF1:0.447460404137;GFI1B:0.438574320375;MYFfamily:0.430195297604;SP1:0.415850795638;MTF1:0.406593935474;VSX1,2:0.39627490105;SOX17:0.395538197216;HNF1A:0.378433724663;NKX2-3_NKX2-5:0.37533238836;EVI1:0.354581037891;FOXP3:0.342461575822;YY1:0.334202134308;STAT2,4,6:0.331407548768;REST:0.327164345147;HMX1:0.286983647694;TLX2:0.272339137806;GZF1:0.263564831164;AIRE:0.25075011442;EP300:0.244018192042;NANOG:0.239368407283;BPTF:0.228670965356;FOXP1:0.206625139964;TFAP2B:0.190692395575;ZBTB16:0.172757899914;EGR1..3:0.157983284502;HBP1_HMGB_SSRP1_UBTF:0.152106739009;CDX1,2,4:0.1181226071;ALX4:0.108500105936;BREu{core}:0.101828821786;PAX1,9:0.0858097429529;JUN:0.0211445821895;XCPE1{core}:0.0148960233535;FOSL2:-0.005081830512;HNF4A_NR2F1,2:-0.0301648816181;GFI1:-0.0395397882293;PBX1:-0.0488409526492;LEF1_TCF7_TCF7L1,2:-0.0562116088951;SOX2:-0.0577005174313;POU6F1:-0.0588742847646;HLF:-0.0683161909823;CUX2:-0.08984917529;POU5F1:-0.176412395526;HOX{A6,A7,B6,B7}:-0.189358796017;ATF4:-0.209093347778;ARID5B:-0.221728448018;SOX{8,9,10}:-0.233065077414;DBP:-0.235350362795;PAX6:-0.258022765919;RXR{A,B,G}:-0.262104597575;RFX1:-0.291939750321;ALX1:-0.302783569257;IRF7:-0.303126073001;HIF1A:-0.304170046358;PITX1..3:-0.33150370842;ETS1,2:-0.344732836855;FOS_FOS{B,L1}_JUN{B,D}:-0.355596419246;FOXQ1:-0.407959304214;NKX2-2,8:-0.411231843733;SPI1:-0.42238104508;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.422695959533;NFIX:-0.432815600562;PRRX1,2:-0.435280120343;FOX{F1,F2,J1}:-0.461434137682;ADNP_IRX_SIX_ZHX:-0.475006902528;NKX6-1,2:-0.4990160481;HES1:-0.500151165744;HSF1,2:-0.503157932754;TFDP1:-0.511189768304;ZFP161:-0.513642426102;NFE2:-0.515912900516;PAX2:-0.527554598163;EN1,2:-0.530060619225;SPIB:-0.547204276;POU3F1..4:-0.553450660743;NFE2L2:-0.555567811805;IRF1,2:-0.560393480039;RUNX1..3:-0.564944727762;BACH2:-0.590435338566;NFKB1_REL_RELA:-0.607821399683;PAX4:-0.641698259148;E2F1..5:-0.642705415499;NFY{A,B,C}:-0.671172461433;FOXN1:-0.689452066137;CEBPA,B_DDIT3:-0.759487148804;ATF5_CREB3:-0.793186001781;ZBTB6:-0.80809790431;AHR_ARNT_ARNT2:-0.828837840236;CREB1:-0.884910379145;POU2F1..3:-0.889854815077;RFX2..5_RFXANK_RFXAP:-0.906720768842;ONECUT1,2:-0.923723003402;POU1F1:-0.927223502968;SREBF1,2:-0.946853501306;DMAP1_NCOR{1,2}_SMARC:-0.947751397355;ZNF143:-0.997639698995;NFIL3:-0.999577248001;STAT1,3:-1.05247657148;bHLH_family:-1.09587830014;PDX1:-1.10440764508;NRF1:-1.11430209841;ELF1,2,4:-1.23169290126;MYB:-1.2420886172;CRX:-1.27060556326;OCT4_SOX2{dimer}:-1.30091331063;STAT5{A,B}:-1.65136653854;PAX3,7:-2.06458251531;PAX8:-2.1309293705;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.59122467763;ELK1,4_GABP{A,B1}:-2.80999645724
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10057-101H3;search_select_hide=table117:FF:10057-101H3
}}
}}

Latest revision as of 12:18, 3 June 2020

Name:umbilical cord, fetal, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11765
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueumbilical cord
dev stage31 weeks fetus
sexmale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberB110269
catalog numberCat:RtHFN: Umbilical cor
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004990
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11765 CAGE DRX008755 DRR009627
Accession ID Hg19

Library idBAMCTSS
CNhs11765 DRZ001052 DRZ002437
Accession ID Hg38

Library idBAMCTSS
CNhs11765 DRZ012402 DRZ013787
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.445
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.137
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes1.105
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.047
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.446
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.525
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0.525
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0669
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0.525
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.445
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.755
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.153
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0556
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0766
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.113
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.525
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.525
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal1.296
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.755
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.525
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic1.178
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.448
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11765

Jaspar motifP-value
MA0002.20.0679
MA0003.10.0389
MA0004.10.0225
MA0006.10.211
MA0007.10.321
MA0009.10.185
MA0014.10.705
MA0017.10.419
MA0018.20.0563
MA0019.10.657
MA0024.10.0294
MA0025.10.0496
MA0027.10.426
MA0028.11.26767e-10
MA0029.10.575
MA0030.10.895
MA0031.10.747
MA0035.20.435
MA0038.10.634
MA0039.20.233
MA0040.10.981
MA0041.10.588
MA0042.10.319
MA0043.10.00336
MA0046.10.628
MA0047.20.297
MA0048.10.0531
MA0050.10.0019
MA0051.19.59935e-4
MA0052.18.2051e-11
MA0055.10.0429
MA0057.10.418
MA0058.14.69515e-4
MA0059.10.0351
MA0060.14.52904e-4
MA0061.10.0683
MA0062.25.61428e-21
MA0065.20.289
MA0066.10.523
MA0067.10.0732
MA0068.10.785
MA0069.10.0971
MA0070.10.526
MA0071.10.146
MA0072.10.716
MA0073.10.426
MA0074.10.589
MA0076.11.85537e-14
MA0077.10.926
MA0078.10.74
MA0079.20.381
MA0080.27.14818e-7
MA0081.12.9546e-4
MA0083.18.37088e-10
MA0084.10.0558
MA0087.10.536
MA0088.10.0418
MA0090.12.17177e-4
MA0091.10.00129
MA0092.10.0886
MA0093.10.00577
MA0099.25.47245e-8
MA0100.10.154
MA0101.10.0141
MA0102.20.173
MA0103.10.202
MA0104.29.57607e-4
MA0105.10.568
MA0106.10.885
MA0107.10.0132
MA0108.23.29143e-34
MA0111.10.328
MA0112.21.42648e-4
MA0113.10.00237
MA0114.10.765
MA0115.10.129
MA0116.10.76
MA0117.10.38
MA0119.10.116
MA0122.10.189
MA0124.10.58
MA0125.10.413
MA0131.10.181
MA0135.10.908
MA0136.12.37799e-16
MA0137.20.527
MA0138.20.0075
MA0139.10.49
MA0140.10.999
MA0141.10.124
MA0142.10.0349
MA0143.10.471
MA0144.10.563
MA0145.10.0348
MA0146.10.616
MA0147.10.0038
MA0148.10.0537
MA0149.10.148
MA0150.10.00332
MA0152.10.0732
MA0153.10.348
MA0154.10.136
MA0155.10.0385
MA0156.14.5628e-16
MA0157.10.37
MA0159.10.662
MA0160.10.591
MA0162.10.0853
MA0163.10.65
MA0164.10.983
MA0258.10.00183
MA0259.10.127



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11765

Novel motifP-value
10.892
100.312
1000.842
1010.876
1020.77
1030.879
1040.787
1050.836
1060.0272
1070.00283
1080.134
1090.618
110.714
1100.606
1110.861
1120.49
1131.57509e-4
1140.544
1150.411
1160.257
1170.0537
1180.494
1190.151
120.13
1200.562
1210.655
1220.0648
1230.207
1240.742
1250.921
1260.423
1270.882
1280.0752
1290.487
130.539
1300.907
1310.211
1320.069
1330.545
1340.613
1350.194
1360.262
1370.362
1380.632
1390.139
140.974
1400.531
1410.687
1420.428
1430.501
1440.217
1450.789
1460.679
1470.0388
1480.589
1490.0251
150.372
1500.825
1510.104
1520.329
1530.425
1540.67
1550.652
1560.899
1570.399
1580.65
1590.501
160.165
1600.0498
1610.53
1620.143
1630.678
1640.82
1650.307
1660.0805
1670.108
1680.0832
1690.022
170.327
180.847
190.00947
20.0238
200.0679
210.699
220.242
230.0137
240.453
250.655
260.904
270.318
280.766
290.148
30.671
300.038
310.468
321.99363e-9
330.233
340.233
350.67
360.0772
370.993
380.609
390.089
40.814
400.553
410.337
420.713
430.625
440.324
450.131
460.244
470.847
480.882
490.428
50.672
500.816
510.586
520.139
530.782
540.425
550.551
560.996
570.461
580.68
590.175
60.307
600.222
610.767
620.275
630.516
640.483
650.115
660.0563
670.448
680.436
690.247
70.806
700.535
710.753
720.914
730.972
740.2
750.405
760.144
770.0738
780.512
790.16
80.641
800.498
810.478
820.115
830.734
840.425
850.0344
860.518
870.0211
880.485
890.0727
90.477
900.202
910.0095
920.0502
930.736
940.45
950.0301
960.192
970.78
980.515
990.216



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11765


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002331 (umbilical cord)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0000478 (extraembryonic structure)
0010317 (germ layer / neural crest derived structure)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010057 (human umbilical cord - fetal sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0000358 (blastocyst)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

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