FF:10070-101I7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001155,UBERON:0000160,UBERON:0000479,UBERON:0001007,UBERON:0000064 | |DRA_sample_Accession=CAGE@SAMD00005845 | ||
|accession_numbers=CAGE;DRX008639;DRR009511;DRZ000936;DRZ002321;DRZ012286;DRZ013671 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001155,UBERON:0000160,UBERON:0000479,UBERON:0001007,UBERON:0000064,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001555,UBERON:0000059,UBERON:0005409 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010070 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:201979743..201979762,+!p1@ELF3!2.51!318.96!ELF3;;chr1:201979703..201979721,+!p2@ELF3!2.40!251.74!ELF3;;chr3:12330560..12330579,+!p1@PPARG!2.27!208.97!PPARG;;chr5:149546334..149546364,+!p1@CDX1!2.11!127.09!CDX1;;chr16:79634595..79634620,-!p2@MAF!2.01!179.03!MAF;;chr6:34524093..34524135,-!p1@SPDEF!1.97!92.27!SPDEF;;chr4:174451370..174451387,-!p1@HAND2!1.97!91.65!HAND2;;chr6:134210243..134210257,+!p1@TCF21!1.90!77.60!TCF21;;chr11:34642612..34642646,+!p1@EHF!1.89!75.77!EHF;;chr13:28543431..28543487,-!p1@CDX2!1.84!68.44!CDX2;;chr19:46801639..46801699,+!p1@HIF3A!1.83!66.60!HIF3A;;chr19:46367576..46367592,+!p1@FOXA3!1.77!58.05!FOXA3;;chr16:86544113..86544145,+!p1@FOXF1!1.76!70.27!FOXF1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.72!51.33!ZBED1;;chr7:27192185..27192209,-!p1@HOXA3!1.71!50.72!HOXA3;;chr17:46682321..46682362,-!p1@HOXB6!1.71!50.10!HOXB6;;chr20:42984330..42984364,+!p2@HNF4A!1.71!50.10!HNF4A;;chr16:79634624..79634642,-!p1@MAF!1.69!179.03!MAF;;chr2:60780753..60780800,-!p1@BCL11A!1.68!218.14!BCL11A;;chr19:50922187..50922204,+!p1@SPIB!1.68!46.44!SPIB;;chr13:72441315..72441454,-!p1@DACH1!1.65!84.93!DACH1;;chr8:76319876..76319926,+!p1@HNF4G!1.64!42.77!HNF4G;;chr13:28543253..28543276,-!p5@CDX2!1.62!40.33!CDX2;;chr20:62680984..62680999,-!p1@SOX18!1.61!51.94!SOX18;;chr13:28543285..28543314,-!p2@CDX2!1.61!39.72!CDX2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.60!38.49!TFCP2L1;;chr6:1389789..1389821,+!p1@FOXF2!1.56!47.66!FOXF2;;chr9:20382446..20382493,-!p4@MLLT3!1.54!33.61!MLLT3;;chr16:85932760..85932775,+!p1@IRF8!1.54!33.61!IRF8;;chr19:33793430..33793447,-!p1@CEBPA!1.49!120.98!CEBPA;;chr11:65554528..65554546,+!p1@OVOL1!1.49!29.94!OVOL1;;chr1:214161272..214161322,+!p1@PROX1!1.48!40.33!PROX1;;chr1:199996831..199996843,+!p4@NR5A2!1.46!28.11!NR5A2;;chr19:46800289..46800327,+!p2@HIF3A!1.45!27.50!HIF3A;;chr3:119500941..119500961,+!p1@NR1I2!1.45!26.89!NR1I2;;chr2:176973498..176973524,+!p1@HOXD10!1.44!26.27!HOXD10;;chr13:73633131..73633149,+!p1@KLF5!1.41!254.80!KLF5;;chr6:135502501..135502546,+!p1@MYB!1.40!28.72!MYB;;chr2:70142232..70142251,+!p1@MXD1!1.39!128.32!MXD1;;chr20:50159198..50159299,-!p1@NFATC2!1.39!34.22!NFATC2;;chr17:53342311..53342400,+!p1@HLF!1.38!26.27!HLF;;chr3:141043020..141043049,+!p17@ZBTB38!1.38!23.22!ZBTB38;;chr17:1959369..1959388,+!p2@HIC1!1.37!58.05!HIC1;;chr7:27224842..27224872,-!p1@HOXA11!1.37!22.61!HOXA11;;chr10:101292684..101292706,+!p1@NKX2-3!1.37!22.61!NKX2-3;;chr18:19749541..19749557,+!p1@GATA6!1.36!67.21!GATA6;;chr11:34642656..34642667,+!p2@EHF!1.35!21.39!EHF;;chr13:28543316..28543329,-!p4@CDX2!1.35!21.39!CDX2;;chr14:38064429..38064486,-!p1@FOXA1!1.35!21.39!FOXA1;;chr19:4153613..4153652,+!p1@CREB3L3!1.35!21.39!CREB3L3;;chr20:43029862..43029900,+!p1@HNF4A!1.35!21.39!HNF4A;;chr8:102504651..102504683,+!p1@GRHL2!1.34!20.78!GRHL2;;chr16:79634581..79634592,-!p4@MAF!1.33!20.16!MAF;;chr12:100897130..100897149,+!p3@NR1H4!1.33!20.16!NR1H4;;chr2:177001290..177001315,+!p1@HOXD3!1.33!20.16!HOXD3;;chr1:47903709..47903764,+!p1@BC169308!1.30!21.39!FOXD2;;chr15:42749722..42749739,-!p2@ZFP106!1.29!33.00!ZFP106;;chr18:19749386..19749404,+!p2@GATA6!1.27!25.05!GATA6;;chr1:151804244..151804310,-!p1@RORC!1.27!17.72!RORC;;chr10:114709999..114710031,+!p1@TCF7L2!1.25!383.73!TCF7L2;;chr14:75745523..75745537,+!p1@FOS!1.24!1896.03!FOS;;chr18:72922811..72922827,+!p1@TSHZ1!1.24!80.66!TSHZ1;;chr6:1389824..1389840,+!p3@FOXF2!1.24!16.50!FOXF2;;chr11:65554563..65554576,+!p2@OVOL1!1.23!15.89!OVOL1;;chr13:72441074..72441172,-!p2@DACH1!1.23!15.89!DACH1;;chr1:200011711..200011752,+!p3@NR5A2!1.23!15.89!NR5A2;;chr7:113726357..113726443,+!p1@FOXP2!1.22!26.89!FOXP2;;chr1:209979467..209979494,-!p1@IRF6!1.22!17.72!IRF6;;chr12:48298765..48298783,-!p2@VDR!1.21!31.77!VDR;;chr17:46687959..46688007,-!p2@HOXB7!1.21!20.78!HOXB7;;chr4:94749897..94749909,+!p1@ATOH1!1.21!15.28!ATOH1;;chr13:28543388..28543406,-!p3@CDX2!1.19!14.66!CDX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.18!20.16!ZBTB16;;chr3:18486354..18486377,-!p2@SATB1!1.18!17.72!SATB1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.18!14.05!HOXC5;;chr7:27205136..27205164,-!p1@HOXA9!1.18!14.05!HOXA9;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.18!14.05!PEG3;;chr2:46524897..46524911,+!p2@EPAS1!1.17!38.49!EPAS1;;chr14:75746722..75746777,+!p2@FOS!1.17!17.72!FOS;;chr2:145277882..145277967,-!p3@ZEB2!1.16!23.22!ZEB2;;chr9:110251836..110251887,-!p4@KLF4!1.16!17.72!KLF4;;chr9:110250697..110250738,-!p2@KLF4!1.16!15.89!KLF4;;chr4:41750731..41750748,-!p1@PHOX2B!1.16!13.44!PHOX2B;;chr15:96873984..96873999,+!p3@NR2F2!1.15!96.54!NR2F2;;chr4:174451350..174451363,-!p3@HAND2!1.14!12.83!HAND2;;chr8:10588010..10588030,-!p1@SOX7!1.14!12.83!SOX7;;chr3:18466787..18466839,-!p1@SATB1!1.12!54.38!SATB1;;chr8:55370487..55370503,+!p1@SOX17!1.12!12.22!SOX17;;chr11:47279248..47279264,+!p3@NR1H3!1.11!13.44!NR1H3;;chr1:27240455..27240474,-!p1@NR0B2!1.10!11.61!NR0B2;;chr17:36105042..36105060,-!p1@HNF1B!1.10!11.61!HNF1B;;chr1:61548225..61548299,+!p1@NFIA!1.08!146.04!NFIA;;chr5:1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| |expression_enrichment_score=chr1:201979743..201979762,+!p1@ELF3!2.51!318.96!ELF3;;chr1:201979703..201979721,+!p2@ELF3!2.40!251.74!ELF3;;chr3:12330560..12330579,+!p1@PPARG!2.27!208.97!PPARG;;chr5:149546334..149546364,+!p1@CDX1!2.11!127.09!CDX1;;chr16:79634595..79634620,-!p2@MAF!2.01!179.03!MAF;;chr6:34524093..34524135,-!p1@SPDEF!1.97!92.27!SPDEF;;chr4:174451370..174451387,-!p1@HAND2!1.97!91.65!HAND2;;chr6:134210243..134210257,+!p1@TCF21!1.90!77.60!TCF21;;chr11:34642612..34642646,+!p1@EHF!1.89!75.77!EHF;;chr13:28543431..28543487,-!p1@CDX2!1.84!68.44!CDX2;;chr19:46801639..46801699,+!p1@HIF3A!1.83!66.60!HIF3A;;chr19:46367576..46367592,+!p1@FOXA3!1.77!58.05!FOXA3;;chr16:86544113..86544145,+!p1@FOXF1!1.76!70.27!FOXF1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.72!51.33!ZBED1;;chr7:27192185..27192209,-!p1@HOXA3!1.71!50.72!HOXA3;;chr17:46682321..46682362,-!p1@HOXB6!1.71!50.10!HOXB6;;chr20:42984330..42984364,+!p2@HNF4A!1.71!50.10!HNF4A;;chr16:79634624..79634642,-!p1@MAF!1.69!179.03!MAF;;chr2:60780753..60780800,-!p1@BCL11A!1.68!218.14!BCL11A;;chr19:50922187..50922204,+!p1@SPIB!1.68!46.44!SPIB;;chr13:72441315..72441454,-!p1@DACH1!1.65!84.93!DACH1;;chr8:76319876..76319926,+!p1@HNF4G!1.64!42.77!HNF4G;;chr13:28543253..28543276,-!p5@CDX2!1.62!40.33!CDX2;;chr20:62680984..62680999,-!p1@SOX18!1.61!51.94!SOX18;;chr13:28543285..28543314,-!p2@CDX2!1.61!39.72!CDX2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.60!38.49!TFCP2L1;;chr6:1389789..1389821,+!p1@FOXF2!1.56!47.66!FOXF2;;chr9:20382446..20382493,-!p4@MLLT3!1.54!33.61!MLLT3;;chr16:85932760..85932775,+!p1@IRF8!1.54!33.61!IRF8;;chr19:33793430..33793447,-!p1@CEBPA!1.49!120.98!CEBPA;;chr11:65554528..65554546,+!p1@OVOL1!1.49!29.94!OVOL1;;chr1:214161272..214161322,+!p1@PROX1!1.48!40.33!PROX1;;chr1:199996831..199996843,+!p4@NR5A2!1.46!28.11!NR5A2;;chr19:46800289..46800327,+!p2@HIF3A!1.45!27.50!HIF3A;;chr3:119500941..119500961,+!p1@NR1I2!1.45!26.89!NR1I2;;chr2:176973498..176973524,+!p1@HOXD10!1.44!26.27!HOXD10;;chr13:73633131..73633149,+!p1@KLF5!1.41!254.80!KLF5;;chr6:135502501..135502546,+!p1@MYB!1.40!28.72!MYB;;chr2:70142232..70142251,+!p1@MXD1!1.39!128.32!MXD1;;chr20:50159198..50159299,-!p1@NFATC2!1.39!34.22!NFATC2;;chr17:53342311..53342400,+!p1@HLF!1.38!26.27!HLF;;chr3:141043020..141043049,+!p17@ZBTB38!1.38!23.22!ZBTB38;;chr17:1959369..1959388,+!p2@HIC1!1.37!58.05!HIC1;;chr7:27224842..27224872,-!p1@HOXA11!1.37!22.61!HOXA11;;chr10:101292684..101292706,+!p1@NKX2-3!1.37!22.61!NKX2-3;;chr18:19749541..19749557,+!p1@GATA6!1.36!67.21!GATA6;;chr11:34642656..34642667,+!p2@EHF!1.35!21.39!EHF;;chr13:28543316..28543329,-!p4@CDX2!1.35!21.39!CDX2;;chr14:38064429..38064486,-!p1@FOXA1!1.35!21.39!FOXA1;;chr19:4153613..4153652,+!p1@CREB3L3!1.35!21.39!CREB3L3;;chr20:43029862..43029900,+!p1@HNF4A!1.35!21.39!HNF4A;;chr8:102504651..102504683,+!p1@GRHL2!1.34!20.78!GRHL2;;chr16:79634581..79634592,-!p4@MAF!1.33!20.16!MAF;;chr12:100897130..100897149,+!p3@NR1H4!1.33!20.16!NR1H4;;chr2:177001290..177001315,+!p1@HOXD3!1.33!20.16!HOXD3;;chr1:47903709..47903764,+!p1@BC169308!1.30!21.39!FOXD2;;chr15:42749722..42749739,-!p2@ZFP106!1.29!33.00!ZFP106;;chr18:19749386..19749404,+!p2@GATA6!1.27!25.05!GATA6;;chr1:151804244..151804310,-!p1@RORC!1.27!17.72!RORC;;chr10:114709999..114710031,+!p1@TCF7L2!1.25!383.73!TCF7L2;;chr14:75745523..75745537,+!p1@FOS!1.24!1896.03!FOS;;chr18:72922811..72922827,+!p1@TSHZ1!1.24!80.66!TSHZ1;;chr6:1389824..1389840,+!p3@FOXF2!1.24!16.50!FOXF2;;chr11:65554563..65554576,+!p2@OVOL1!1.23!15.89!OVOL1;;chr13:72441074..72441172,-!p2@DACH1!1.23!15.89!DACH1;;chr1:200011711..200011752,+!p3@NR5A2!1.23!15.89!NR5A2;;chr7:113726357..113726443,+!p1@FOXP2!1.22!26.89!FOXP2;;chr1:209979467..209979494,-!p1@IRF6!1.22!17.72!IRF6;;chr12:48298765..48298783,-!p2@VDR!1.21!31.77!VDR;;chr17:46687959..46688007,-!p2@HOXB7!1.21!20.78!HOXB7;;chr4:94749897..94749909,+!p1@ATOH1!1.21!15.28!ATOH1;;chr13:28543388..28543406,-!p3@CDX2!1.19!14.66!CDX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.18!20.16!ZBTB16;;chr3:18486354..18486377,-!p2@SATB1!1.18!17.72!SATB1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.18!14.05!HOXC5;;chr7:27205136..27205164,-!p1@HOXA9!1.18!14.05!HOXA9;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.18!14.05!PEG3;;chr2:46524897..46524911,+!p2@EPAS1!1.17!38.49!EPAS1;;chr14:75746722..75746777,+!p2@FOS!1.17!17.72!FOS;;chr2:145277882..145277967,-!p3@ZEB2!1.16!23.22!ZEB2;;chr9:110251836..110251887,-!p4@KLF4!1.16!17.72!KLF4;;chr9:110250697..110250738,-!p2@KLF4!1.16!15.89!KLF4;;chr4:41750731..41750748,-!p1@PHOX2B!1.16!13.44!PHOX2B;;chr15:96873984..96873999,+!p3@NR2F2!1.15!96.54!NR2F2;;chr4:174451350..174451363,-!p3@HAND2!1.14!12.83!HAND2;;chr8:10588010..10588030,-!p1@SOX7!1.14!12.83!SOX7;;chr3:18466787..18466839,-!p1@SATB1!1.12!54.38!SATB1;;chr8:55370487..55370503,+!p1@SOX17!1.12!12.22!SOX17;;chr11:47279248..47279264,+!p3@NR1H3!1.11!13.44!NR1H3;;chr1:27240455..27240474,-!p1@NR0B2!1.10!11.61!NR0B2;;chr17:36105042..36105060,-!p1@HNF1B!1.10!11.61!HNF1B;;chr1:61548225..61548299,+!p1@NFIA!1.08!146.04!NFIA;;chr5:133451294..133451310,+!p2@TCF7!1.08!11.00!TCF7;;chr7:156803329..156803362,-!p1@MNX1!1.08!11.00!MNX1;;chr2:176994408..176994492,+!p1@HOXD8!1.08!11.00!HOXD8;;chr4:149363494..149363543,-!p1@NR3C2!1.08!11.00!NR3C2;;chr2:200323414..200323455,-!p1@SATB2!1.07!23.22!SATB2;;chrX:131623044..131623089,-!p1@MBNL3!1.06!43.99!MBNL3;;chr1:61548374..61548415,+!p4@NFIA!1.06!19.55!NFIA;;chr3:71355163..71355209,-!p5@FOXP1!1.06!14.66!FOXP1;;chr13:73636621..73636647,+!p4@KLF5!1.06!10.39!KLF5;;chr8:25902876..25902936,-!p1@EBF2!1.06!10.39!EBF2;;chr5:158526917..158526932,-!p1@EBF1!1.05!25.66!EBF1;;chr10:70320074..70320106,+!p1@TET1!1.05!20.78!TET1;;chr10:114710060..114710069,+!p5@TCF7L2!1.05!17.72!TCF7L2;;chr3:12329397..12329433,+!p2@PPARG!1.04!23.22!PPARG;;chr19:58373157..58373159,+!p4@ZNF587!1.03!17.72!ZNF587;;chr20:6748325..6748352,+!p1@BMP2!1.03!14.05!BMP2;;chr3:141043050..141043063,+!p22@ZBTB38!1.03!9.78!ZBTB38;;chr11:34645791..34645836,+!p3@EHF!1.03!9.78!EHF;;chr5:134369879..134369898,-!p2@PITX1!1.03!9.78!PITX1;;chr2:43453734..43453751,-!p1@ZFP36L2!1.02!1027.75!ZFP36L2;;chr17:38256822..38256851,-!p1@NR1D1!1.02!75.16!NR1D1;;chr2:19558373..19558392,-!p1@OSR1!1.02!26.27!OSR1;;chr3:114819124..114819200,-!p3@ZBTB20!1.02!22.61!ZBTB20;;chr4:38665810..38665827,+!p1@KLF3!1.01!136.26!KLF3;;chr2:60780607..60780624,-!p2@BCL11A!1.01!28.72!BCL11A;;chr6:7108179..7108199,+!p4@RREB1!1.01!18.94!RREB1;;chr3:24536253..24536328,-!p1@THRB!1.01!17.72!THRB;;chr2:70166212..70166223,+!p16@MXD1!1.01!9.17!MXD1;;chr7:27213893..27213954,-!p1@HOXA10!1.01!9.17!HOXA10;;chr7:27224795..27224840,-!p2@HOXA11!1.01!9.17!HOXA11;;chr1:40105299..40105326,-!p1@HEYL!1.01!9.17!HEYL;;chr11:16419037..16419064,-!p3@SOX6!1.01!9.17!SOX6;;chr11:47400078..47400106,-!p1@SPI1!1.01!9.17!SPI1;;chr12:121416340..121416360,+!p1@HNF1A!1.01!9.17!HNF1A;;chr10:111967345..111967422,+!p1@MXI1!1.00!150.92!MXI1;;chr12:52445218..52445237,+!p1@NR4A1!1.00!115.48!NR4A1;;chr3:114866084..114866118,-!p2@ZBTB20!1.00!33.61!ZBTB20;;chr17:38256799..38256815,-!p3@NR1D1!1.00!16.50!NR1D1;;chr8:60031682..60031710,-!p2@TOX!1.00!14.66!TOX;;chr15:96874012..96874042,+!p2@NR2F2!0.99!80.66!NR2F2;;chr20:51588873..51588953,+!p1@TSHZ2!0.99!11.61!TSHZ2;;chr8:48650715..48650735,-!p1@CEBPD!0.98!1113.30!CEBPD;;chr15:61521417..61521460,-!p2@RORA!0.98!19.55!RORA;;chr17:46806035..46806059,-!p2@HOXB13!0.98!8.55!HOXB13;;chr1:209979411..209979433,-!p2@IRF6!0.98!8.55!IRF6;;chr1:6479968..6479986,-!p1@HES2!0.98!8.55!HES2;;chr21:39870339..39870443,-!p1@ERG!0.98!8.55!ERG;;chr7:114054885..114054910,+!p4@FOXP2!0.98!8.55!FOXP2;;chr2:177001268..177001287,+!p3@HOXD3!0.98!8.55!HOXD3;;chr4:109087445..109087463,-!p1@LEF1!0.98!8.55!LEF1;;chr13:73636252..73636307,+!p2@KLF5!0.97!9.78!KLF5;;chr12:115121962..115121987,-!p1@TBX3!0.96!70.27!TBX3;;chr2:10183651..10183713,+!p1@KLF11!0.96!60.49!KLF11;;chr10:114710098..114710130,+!p2@TCF7L2!0.95!61.10!TCF7L2;;chr10:111967317..111967328,+!p5@MXI1!0.95!7.94!MXI1;;chr12:100867627..100867652,+!p1@NR1H4!0.95!7.94!NR1H4;;chr21:40177845..40177863,+!p1@ETS2!0.94!476.60!ETS2;;chr5:124084493..124084524,-!p2@ZNF608!0.94!17.72!ZNF608;;chr3:71179699..71179744,-!p2@FOXP1!0.93!58.66!FOXP1;;chr13:41593425..41593480,-!p1@ELF1!0.93!49.49!ELF1;;chr13:37494365..37494381,-!p1@SMAD9!0.93!13.44!SMAD9;;chr6:21597600..21597664,+!p3@SOX4!0.93!12.83!SOX4;;chr6:1312325..1312340,+!p1@FOXQ1!0.92!12.22!FOXQ1;;chr5:71803177..71803255,-!p1@ZNF366!0.92!7.33!ZNF366;;chr6:391743..391759,+!p1@IRF4!0.92!7.33!IRF4;;chr7:27205106..27205134,-!p2@HOXA9!0.92!7.33!HOXA9;;chr22:38380543..38380569,-!p1@SOX10!0.92!7.33!SOX10;;chr3:18465604..18465618,-!p9@SATB1!0.92!7.33!SATB1;;chr3:71294213..71294240,-!p30@FOXP1!0.92!7.33!FOXP1;;chr4:149363475..149363492,-!p2@NR3C2!0.92!7.33!NR3C2;;chr16:52581025..52581072,-!p1@TOX3!0.92!7.33!TOX3;;chr17:46690839..46690884,-!p1@HOXB8!0.92!7.33!HOXB8;;chr11:71955210..71955227,-!p1@PHOX2A!0.92!7.33!PHOX2A;;chr1:221052840..221052875,+!p4@HLX!0.91!8.55!HLX;;chr2:145277640..145277771,-!p1@ZEB2!0.90!96.54!ZEB2;;chr10:114710218..114710229,+!p4@TCF7L2!0.90!14.05!TCF7L2;;chr18:19749517..19749531,+!p3@GATA6!0.90!12.83!GATA6;;chr5:134369905..134369972,-!p1@PITX1!0.90!11.00!PITX1;;chr5:88178983..88179012,-!p1@MEF2C!0.89!54.38!MEF2C;;chr3:71179746..71179783,-!p7@FOXP1!0.89!23.83!FOXP1;;chr11:47279504..47279563,+!p1@NR1H3!0.89!15.89!NR1H3;;chr8:71316428..71316459,-!p2@NCOA2!0.89!11.61!NCOA2;;chr5:88179195..88179224,-!p3@MEF2C!0.89!11.00!MEF2C;;chr7:137620650..137620677,-!p3@CREB3L2!0.89!6.72!CREB3L2;;chr7:15726243..15726293,-!p2@MEOX2!0.89!6.72!MEOX2;;chr7:27239740..27239759,-!p2@HOXA13!0.89!6.72!HOXA13;;chr16:79634464..79634493,-!p5@MAF!0.89!6.72!MAF;;chr20:30433396..30433414,-!p1@FOXS1!0.89!6.72!FOXS1;;chr11:113930401..113930422,+!p3@ZBTB16!0.89!6.72!ZBTB16;;chr2:176969228..176969260,+!p1@HOXD11!0.89!6.72!HOXD11;;chr2:5832508..5832524,+!p1@SOX11!0.89!6.72!SOX11;;chr2:60780730..60780742,-!p5@BCL11A!0.89!6.72!BCL11A;;chr6:144289132..144289134,-!p3@PLAGL1!0.88!15.89!PLAGL1;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.87!19.55!ZKSC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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000160;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001155;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005409 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 36: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/colon%252c%2520fetal%252c%2520donor1.CNhs11780.10070-101I7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/colon%252c%2520fetal%252c%2520donor1.CNhs11780.10070-101I7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/colon%252c%2520fetal%252c%2520donor1.CNhs11780.10070-101I7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/colon%252c%2520fetal%252c%2520donor1.CNhs11780.10070-101I7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/colon%252c%2520fetal%252c%2520donor1.CNhs11780.10070-101I7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10070-101I7 | |id=FF:10070-101I7 | ||
|is_a=EFO:0002091;;FF:0010070 | |is_a=EFO:0002091;;FF:0010070 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11780 | |||
|library_id_phase_based=2:CNhs11780 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10070 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10070 | |||
|name=colon, fetal, donor1 | |name=colon, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 44: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11780,LSID820,release009,COMPLETED | |profile_hcage=CNhs11780,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:RtHFN: Colon | |rna_catalog_number=Cat:RtHFN: Colon | ||
| Line 59: | Line 78: | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 80: | Line 100: | ||
|top_motifs=HNF4A_NR2F1,2:4.23213585725;HNF1A:3.66884520747;FOXD3:2.92721141115;DBP:2.84435762306;MTF1:2.81686810515;T:2.61933567985;FOXL1:2.58024244692;IKZF2:2.15092046023;SRF:2.14168067706;TBP:2.12472495717;MYBL2:2.08668101871;SPZ1:2.0599219404;XCPE1{core}:1.99725479595;SNAI1..3:1.96979491823;SP1:1.90238550067;PRDM1:1.89061090688;MAZ:1.87940120276;TFCP2:1.8553722361;NKX2-3_NKX2-5:1.81415899514;ZEB1:1.78904647683;FOXP1:1.78685258251;MTE{core}:1.74624593916;POU5F1:1.73557120817;FOX{D1,D2}:1.72386018613;HOX{A6,A7,B6,B7}:1.70894389693;FOXO1,3,4:1.66219272129;MZF1:1.5851454858;PATZ1:1.55926687621;BPTF:1.49623422813;NR6A1:1.48900555928;GATA6:1.47894814979;EP300:1.43587610272;NR1H4:1.40816470151;TFAP2{A,C}:1.40513847116;HIC1:1.31105079078;MED-1{core}:1.30463449407;TFAP2B:1.29705018936;POU6F1:1.28187940821;ZNF148:1.22778671672;GTF2I:1.2242285745;PAX6:1.21775999506;GATA4:1.21279719842;FOXM1:1.18084071155;FOX{F1,F2,J1}:1.13621634746;MYFfamily:1.13231817325;ATF6:1.08443081382;CDX1,2,4:0.980958589194;FOX{I1,J2}:0.977353080066;HMX1:0.951260868394;NR3C1:0.915552555352;TFAP4:0.875596755923;SOX5:0.871518726484;HMGA1,2:0.864941462929;EGR1..3:0.853071321553;RREB1:0.830396714929;ADNP_IRX_SIX_ZHX:0.76746501804;TLX1..3_NFIC{dimer}:0.754033857862;ZNF423:0.748703294938;KLF4:0.740733319254;PAX5:0.734497719607;GLI1..3:0.70711404082;ZNF384:0.682187218849;PITX1..3:0.681982415327;RBPJ:0.672149374115;TOPORS:0.664290227836;GCM1,2:0.653494589304;LMO2:0.635429670296;DMAP1_NCOR{1,2}_SMARC:0.619843979697;GFI1B:0.616204720529;FOXA2:0.581385353441;CDC5L:0.572563068833;NKX2-1,4:0.570737997596;REST:0.51365822469;BREu{core}:0.513378687311;NANOG:0.505067084883;ZFP161:0.503443049801;TBX4,5:0.479670834272;ESR1:0.477763227168;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.445436194414;TLX2:0.441731245489;AIRE:0.43723950399;GZF1:0.429957972387;STAT2,4,6:0.42871658779;ETS1,2:0.419707345702;NR5A1,2:0.404890749786;RXR{A,B,G}:0.398015363059;HBP1_HMGB_SSRP1_UBTF:0.38216244883;SMAD1..7,9:0.366898228539;FOXQ1:0.346184291509;NHLH1,2:0.303458841284;NKX6-1,2:0.296673129856;ZBTB16:0.29397817605;MYOD1:0.283713574434;ONECUT1,2:0.274304394335;LEF1_TCF7_TCF7L1,2:0.270652991381;IRF1,2:0.266366385871;PRRX1,2:0.264860811124;SREBF1,2:0.262662889797;FOXN1:0.250024411737;POU1F1:0.244389866355;TEAD1:0.238992918624;IRF7:0.236491033827;GFI1:0.222604034826;VSX1,2:0.208263903414;AR:0.177607199101;NANOG{mouse}:0.175305862636;OCT4_SOX2{dimer}:0.149752044949;GTF2A1,2:0.132352578058;TAL1_TCF{3,4,12}:0.129024875331;ATF2:0.124985083456;SPIB:0.11559387634;ATF4:0.0800809538856;MEF2{A,B,C,D}:0.0421905176269;EBF1:0.0397754858405;NKX2-2,8:0.038648093772;SPI1:0.0336800546134;ESRRA:0.0333479047093;NFATC1..3:-0.00630082737492;ARID5B:-0.00711431547617;ALX1:-0.00923576333128;CUX2:-0.022683158711;UFEwm:-0.0257256273908;STAT1,3:-0.0355782880885;ZBTB6:-0.0363911857766;HES1:-0.0657018756698;FOXP3:-0.0692220927696;SOX2:-0.0957178462632;MAFB:-0.102120632227;POU3F1..4:-0.102933697343;SOX17:-0.120676517407;RXRA_VDR{dimer}:-0.126436122184;POU2F1..3:-0.143264600463;IKZF1:-0.153465641654;CEBPA,B_DDIT3:-0.161090152309;SOX{8,9,10}:-0.182672154111;XBP1:-0.195369062919;RUNX1..3:-0.198735117386;HIF1A:-0.216720428499;ZIC1..3:-0.222411461719;TEF:-0.225369420059;bHLH_family:-0.242763111492;JUN:-0.251132671656;PAX2:-0.255735136584;ZNF238:-0.258133705221;LHX3,4:-0.291154964671;EVI1:-0.309668459;NFKB1_REL_RELA:-0.310313010291;PAX3,7:-0.351176652554;PBX1:-0.393671611483;TGIF1:-0.397953113667;ATF5_CREB3:-0.41646889202;HAND1,2:-0.425530577145;NFIL3:-0.464178212362;ZNF143:-0.478702295528;HLF:-0.479798578914;AHR_ARNT_ARNT2:-0.49893173281;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.50071967433;NFY{A,B,C}:-0.510441157692;FOSL2:-0.527330361871;NFIX:-0.561732019343;NFE2:-0.57686197585;ELF1,2,4:-0.581119500071;PPARG:-0.598214190793;NKX3-2:-0.604446657392;TFDP1:-0.611835991344;TP53:-0.615621654441;E2F1..5:-0.61594453459;CREB1:-0.625413055861;PDX1:-0.643677795292;RFX2..5_RFXANK_RFXAP:-0.676266140636;HOX{A4,D4}:-0.727175040251;FOS_FOS{B,L1}_JUN{B,D}:-0.759227175839;RFX1:-0.80487324359;NKX3-1:-0.844638067187;RORA:-0.844941402991;NRF1:-0.891548501044;CRX:-0.912743834992;NFE2L2:-0.973630430761;BACH2:-0.982125399229;HOX{A5,B5}:-1.07338808665;NFE2L1:-1.12924024331;PAX4:-1.19051072024;ALX4:-1.19693081161;HSF1,2:-1.2863252534;PAX1,9:-1.2864108292;MYB:-1.33801535546;STAT5{A,B}:-1.33862796405;EN1,2:-1.33943718228;HOXA9_MEIS1:-1.50050341398;YY1:-1.6560357995;ELK1,4_GABP{A,B1}:-1.67527325961;PAX8:-2.01552186177 | |top_motifs=HNF4A_NR2F1,2:4.23213585725;HNF1A:3.66884520747;FOXD3:2.92721141115;DBP:2.84435762306;MTF1:2.81686810515;T:2.61933567985;FOXL1:2.58024244692;IKZF2:2.15092046023;SRF:2.14168067706;TBP:2.12472495717;MYBL2:2.08668101871;SPZ1:2.0599219404;XCPE1{core}:1.99725479595;SNAI1..3:1.96979491823;SP1:1.90238550067;PRDM1:1.89061090688;MAZ:1.87940120276;TFCP2:1.8553722361;NKX2-3_NKX2-5:1.81415899514;ZEB1:1.78904647683;FOXP1:1.78685258251;MTE{core}:1.74624593916;POU5F1:1.73557120817;FOX{D1,D2}:1.72386018613;HOX{A6,A7,B6,B7}:1.70894389693;FOXO1,3,4:1.66219272129;MZF1:1.5851454858;PATZ1:1.55926687621;BPTF:1.49623422813;NR6A1:1.48900555928;GATA6:1.47894814979;EP300:1.43587610272;NR1H4:1.40816470151;TFAP2{A,C}:1.40513847116;HIC1:1.31105079078;MED-1{core}:1.30463449407;TFAP2B:1.29705018936;POU6F1:1.28187940821;ZNF148:1.22778671672;GTF2I:1.2242285745;PAX6:1.21775999506;GATA4:1.21279719842;FOXM1:1.18084071155;FOX{F1,F2,J1}:1.13621634746;MYFfamily:1.13231817325;ATF6:1.08443081382;CDX1,2,4:0.980958589194;FOX{I1,J2}:0.977353080066;HMX1:0.951260868394;NR3C1:0.915552555352;TFAP4:0.875596755923;SOX5:0.871518726484;HMGA1,2:0.864941462929;EGR1..3:0.853071321553;RREB1:0.830396714929;ADNP_IRX_SIX_ZHX:0.76746501804;TLX1..3_NFIC{dimer}:0.754033857862;ZNF423:0.748703294938;KLF4:0.740733319254;PAX5:0.734497719607;GLI1..3:0.70711404082;ZNF384:0.682187218849;PITX1..3:0.681982415327;RBPJ:0.672149374115;TOPORS:0.664290227836;GCM1,2:0.653494589304;LMO2:0.635429670296;DMAP1_NCOR{1,2}_SMARC:0.619843979697;GFI1B:0.616204720529;FOXA2:0.581385353441;CDC5L:0.572563068833;NKX2-1,4:0.570737997596;REST:0.51365822469;BREu{core}:0.513378687311;NANOG:0.505067084883;ZFP161:0.503443049801;TBX4,5:0.479670834272;ESR1:0.477763227168;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.445436194414;TLX2:0.441731245489;AIRE:0.43723950399;GZF1:0.429957972387;STAT2,4,6:0.42871658779;ETS1,2:0.419707345702;NR5A1,2:0.404890749786;RXR{A,B,G}:0.398015363059;HBP1_HMGB_SSRP1_UBTF:0.38216244883;SMAD1..7,9:0.366898228539;FOXQ1:0.346184291509;NHLH1,2:0.303458841284;NKX6-1,2:0.296673129856;ZBTB16:0.29397817605;MYOD1:0.283713574434;ONECUT1,2:0.274304394335;LEF1_TCF7_TCF7L1,2:0.270652991381;IRF1,2:0.266366385871;PRRX1,2:0.264860811124;SREBF1,2:0.262662889797;FOXN1:0.250024411737;POU1F1:0.244389866355;TEAD1:0.238992918624;IRF7:0.236491033827;GFI1:0.222604034826;VSX1,2:0.208263903414;AR:0.177607199101;NANOG{mouse}:0.175305862636;OCT4_SOX2{dimer}:0.149752044949;GTF2A1,2:0.132352578058;TAL1_TCF{3,4,12}:0.129024875331;ATF2:0.124985083456;SPIB:0.11559387634;ATF4:0.0800809538856;MEF2{A,B,C,D}:0.0421905176269;EBF1:0.0397754858405;NKX2-2,8:0.038648093772;SPI1:0.0336800546134;ESRRA:0.0333479047093;NFATC1..3:-0.00630082737492;ARID5B:-0.00711431547617;ALX1:-0.00923576333128;CUX2:-0.022683158711;UFEwm:-0.0257256273908;STAT1,3:-0.0355782880885;ZBTB6:-0.0363911857766;HES1:-0.0657018756698;FOXP3:-0.0692220927696;SOX2:-0.0957178462632;MAFB:-0.102120632227;POU3F1..4:-0.102933697343;SOX17:-0.120676517407;RXRA_VDR{dimer}:-0.126436122184;POU2F1..3:-0.143264600463;IKZF1:-0.153465641654;CEBPA,B_DDIT3:-0.161090152309;SOX{8,9,10}:-0.182672154111;XBP1:-0.195369062919;RUNX1..3:-0.198735117386;HIF1A:-0.216720428499;ZIC1..3:-0.222411461719;TEF:-0.225369420059;bHLH_family:-0.242763111492;JUN:-0.251132671656;PAX2:-0.255735136584;ZNF238:-0.258133705221;LHX3,4:-0.291154964671;EVI1:-0.309668459;NFKB1_REL_RELA:-0.310313010291;PAX3,7:-0.351176652554;PBX1:-0.393671611483;TGIF1:-0.397953113667;ATF5_CREB3:-0.41646889202;HAND1,2:-0.425530577145;NFIL3:-0.464178212362;ZNF143:-0.478702295528;HLF:-0.479798578914;AHR_ARNT_ARNT2:-0.49893173281;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.50071967433;NFY{A,B,C}:-0.510441157692;FOSL2:-0.527330361871;NFIX:-0.561732019343;NFE2:-0.57686197585;ELF1,2,4:-0.581119500071;PPARG:-0.598214190793;NKX3-2:-0.604446657392;TFDP1:-0.611835991344;TP53:-0.615621654441;E2F1..5:-0.61594453459;CREB1:-0.625413055861;PDX1:-0.643677795292;RFX2..5_RFXANK_RFXAP:-0.676266140636;HOX{A4,D4}:-0.727175040251;FOS_FOS{B,L1}_JUN{B,D}:-0.759227175839;RFX1:-0.80487324359;NKX3-1:-0.844638067187;RORA:-0.844941402991;NRF1:-0.891548501044;CRX:-0.912743834992;NFE2L2:-0.973630430761;BACH2:-0.982125399229;HOX{A5,B5}:-1.07338808665;NFE2L1:-1.12924024331;PAX4:-1.19051072024;ALX4:-1.19693081161;HSF1,2:-1.2863252534;PAX1,9:-1.2864108292;MYB:-1.33801535546;STAT5{A,B}:-1.33862796405;EN1,2:-1.33943718228;HOXA9_MEIS1:-1.50050341398;YY1:-1.6560357995;ELK1,4_GABP{A,B1}:-1.67527325961;PAX8:-2.01552186177 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10070-101I7;search_select_hide=table117:FF:10070-101I7 | |||
}} | }} | ||
Latest revision as of 12:19, 3 June 2020
| Name: | colon, fetal, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11780 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11780
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11780
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0344 |
| 10 | 10 | 0.0573 |
| 100 | 100 | 0.198 |
| 101 | 101 | 0.897 |
| 102 | 102 | 0.252 |
| 103 | 103 | 0.156 |
| 104 | 104 | 0.818 |
| 105 | 105 | 0.318 |
| 106 | 106 | 0.597 |
| 107 | 107 | 0.0584 |
| 108 | 108 | 0.217 |
| 109 | 109 | 0.0318 |
| 11 | 11 | 0.24 |
| 110 | 110 | 0.0642 |
| 111 | 111 | 0.00993 |
| 112 | 112 | 0.935 |
| 113 | 113 | 0.0202 |
| 114 | 114 | 0.00823 |
| 115 | 115 | 0.396 |
| 116 | 116 | 0.932 |
| 117 | 117 | 0.0139 |
| 118 | 118 | 0.558 |
| 119 | 119 | 0.916 |
| 12 | 12 | 0.645 |
| 120 | 120 | 0.392 |
| 121 | 121 | 0.298 |
| 122 | 122 | 0.756 |
| 123 | 123 | 0.688 |
| 124 | 124 | 0.962 |
| 125 | 125 | 0.05 |
| 126 | 126 | 0.749 |
| 127 | 127 | 0.0791 |
| 128 | 128 | 0.042 |
| 129 | 129 | 0.94 |
| 13 | 13 | 0.0902 |
| 130 | 130 | 0.932 |
| 131 | 131 | 0.786 |
| 132 | 132 | 0.0421 |
| 133 | 133 | 0.264 |
| 134 | 134 | 0.342 |
| 135 | 135 | 0.563 |
| 136 | 136 | 0.265 |
| 137 | 137 | 0.291 |
| 138 | 138 | 0.88 |
| 139 | 139 | 0.16 |
| 14 | 14 | 0.924 |
| 140 | 140 | 0.612 |
| 141 | 141 | 0.126 |
| 142 | 142 | 0.506 |
| 143 | 143 | 0.0268 |
| 144 | 144 | 0.906 |
| 145 | 145 | 0.649 |
| 146 | 146 | 0.178 |
| 147 | 147 | 0.599 |
| 148 | 148 | 0.581 |
| 149 | 149 | 0.747 |
| 15 | 15 | 0.0467 |
| 150 | 150 | 0.748 |
| 151 | 151 | 0.864 |
| 152 | 152 | 0.445 |
| 153 | 153 | 0.723 |
| 154 | 154 | 0.658 |
| 155 | 155 | 0.708 |
| 156 | 156 | 0.832 |
| 157 | 157 | 0.944 |
| 158 | 158 | 0.203 |
| 159 | 159 | 0.93 |
| 16 | 16 | 0.337 |
| 160 | 160 | 0.675 |
| 161 | 161 | 0.363 |
| 162 | 162 | 0.143 |
| 163 | 163 | 0.55 |
| 164 | 164 | 0.229 |
| 165 | 165 | 0.923 |
| 166 | 166 | 0.104 |
| 167 | 167 | 0.0477 |
| 168 | 168 | 0.534 |
| 169 | 169 | 0.346 |
| 17 | 17 | 0.804 |
| 18 | 18 | 0.00235 |
| 19 | 19 | 0.539 |
| 2 | 2 | 0.0728 |
| 20 | 20 | 0.11 |
| 21 | 21 | 0.256 |
| 22 | 22 | 0.679 |
| 23 | 23 | 0.431 |
| 24 | 24 | 0.257 |
| 25 | 25 | 0.592 |
| 26 | 26 | 0.295 |
| 27 | 27 | 0.847 |
| 28 | 28 | 0.819 |
| 29 | 29 | 0.0146 |
| 3 | 3 | 0.443 |
| 30 | 30 | 0.0352 |
| 31 | 31 | 0.902 |
| 32 | 32 | 0.0135 |
| 33 | 33 | 0.112 |
| 34 | 34 | 0.26 |
| 35 | 35 | 0.115 |
| 36 | 36 | 0.0335 |
| 37 | 37 | 0.0665 |
| 38 | 38 | 0.835 |
| 39 | 39 | 0.341 |
| 4 | 4 | 0.436 |
| 40 | 40 | 0.237 |
| 41 | 41 | 0.208 |
| 42 | 42 | 0.232 |
| 43 | 43 | 0.366 |
| 44 | 44 | 0.943 |
| 45 | 45 | 0.425 |
| 46 | 46 | 0.156 |
| 47 | 47 | 0.167 |
| 48 | 48 | 0.303 |
| 49 | 49 | 0.229 |
| 5 | 5 | 0.626 |
| 50 | 50 | 0.374 |
| 51 | 51 | 0.916 |
| 52 | 52 | 0.0912 |
| 53 | 53 | 0.43 |
| 54 | 54 | 0.874 |
| 55 | 55 | 0.192 |
| 56 | 56 | 0.874 |
| 57 | 57 | 0.206 |
| 58 | 58 | 0.648 |
| 59 | 59 | 0.851 |
| 6 | 6 | 0.912 |
| 60 | 60 | 0.441 |
| 61 | 61 | 0.546 |
| 62 | 62 | 0.755 |
| 63 | 63 | 0.889 |
| 64 | 64 | 0.535 |
| 65 | 65 | 0.887 |
| 66 | 66 | 0.0161 |
| 67 | 67 | 0.12 |
| 68 | 68 | 0.765 |
| 69 | 69 | 0.954 |
| 7 | 7 | 0.399 |
| 70 | 70 | 0.133 |
| 71 | 71 | 0.0508 |
| 72 | 72 | 0.567 |
| 73 | 73 | 0.156 |
| 74 | 74 | 0.199 |
| 75 | 75 | 0.00283 |
| 76 | 76 | 0.192 |
| 77 | 77 | 0.485 |
| 78 | 78 | 0.646 |
| 79 | 79 | 0.667 |
| 8 | 8 | 0.246 |
| 80 | 80 | 0.832 |
| 81 | 81 | 0.765 |
| 82 | 82 | 0.43 |
| 83 | 83 | 0.246 |
| 84 | 84 | 0.723 |
| 85 | 85 | 0.264 |
| 86 | 86 | 0.178 |
| 87 | 87 | 0.0738 |
| 88 | 88 | 0.852 |
| 89 | 89 | 0.409 |
| 9 | 9 | 0.615 |
| 90 | 90 | 0.137 |
| 91 | 91 | 0.339 |
| 92 | 92 | 0.845 |
| 93 | 93 | 0.0657 |
| 94 | 94 | 0.0238 |
| 95 | 95 | 0.0109 |
| 96 | 96 | 0.836 |
| 97 | 97 | 0.552 |
| 98 | 98 | 0.121 |
| 99 | 99 | 0.132 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11780
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010070 human colon - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001155 (colon)
0000160 (intestine)
0000479 (tissue)
0001007 (digestive system)
0000064 (organ part)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0000059 (large intestine)
0005409 (gastrointestinal system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010070 (human colon - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
