FF:10155-103A2: Difference between revisions

Latest revision as of 12:23, 3 June 2020

Name:	medulla oblongata, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12315
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	medulla oblongata
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005583

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12315		CAGE		DRX008687		DRR009559

Accession ID Hg19

Library id		BAM		CTSS
CNhs12315		DRZ000984		DRZ002369

Accession ID Hg38

Library id		BAM		CTSS
CNhs12315		DRZ012334		DRZ013719

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10027		download		download		download		download

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.125
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.798
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.302
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.159
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.816
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.346
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.087
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0457
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.192
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.0457
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0457
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.0457
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.087
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0.844
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.522
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0457
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0457
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.259
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.673
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.192
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0457
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0413
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.0457
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0131
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0457
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.803
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0457
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.263
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.346
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.087
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0457
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.087
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.25
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0562
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.426
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0861
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0503
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.55
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.087
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0.125
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.236
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.549
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.087
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.507
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.969
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0457
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.00128
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.207
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.388
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0717
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.276
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.159
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.577
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.125
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.368
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.087
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12315

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0152
MA0003.1	MA0003.1	0.213
MA0004.1	MA0004.1	0.282
MA0006.1	MA0006.1	0.54
MA0007.1	MA0007.1	0.398
MA0009.1	MA0009.1	0.0915
MA0014.1	MA0014.1	0.688
MA0017.1	MA0017.1	0.00697
MA0018.2	MA0018.2	0.275
MA0019.1	MA0019.1	0.716
MA0024.1	MA0024.1	0.789
MA0025.1	MA0025.1	0.779
MA0027.1	MA0027.1	0.589
MA0028.1	MA0028.1	0.0467
MA0029.1	MA0029.1	0.03
MA0030.1	MA0030.1	0.0105
MA0031.1	MA0031.1	0.136
MA0035.2	MA0035.2	0.00526
MA0038.1	MA0038.1	0.13
MA0039.2	MA0039.2	0.441
MA0040.1	MA0040.1	0.588
MA0041.1	MA0041.1	0.698
MA0042.1	MA0042.1	0.843
MA0043.1	MA0043.1	0.685
MA0046.1	MA0046.1	0.021
MA0047.2	MA0047.2	0.49
MA0048.1	MA0048.1	0.15
MA0050.1	MA0050.1	0.173
MA0051.1	MA0051.1	0.299
MA0052.1	MA0052.1	0.903
MA0055.1	MA0055.1	0.00289
MA0057.1	MA0057.1	0.819
MA0058.1	MA0058.1	0.364
MA0059.1	MA0059.1	0.068
MA0060.1	MA0060.1	0.102
MA0061.1	MA0061.1	0.00283
MA0062.2	MA0062.2	0.00217
MA0065.2	MA0065.2	7.03251e-4
MA0066.1	MA0066.1	0.00728
MA0067.1	MA0067.1	0.997
MA0068.1	MA0068.1	0.99
MA0069.1	MA0069.1	0.689
MA0070.1	MA0070.1	0.404
MA0071.1	MA0071.1	0.0544
MA0072.1	MA0072.1	0.617
MA0073.1	MA0073.1	0.506
MA0074.1	MA0074.1	0.214
MA0076.1	MA0076.1	0.0965
MA0077.1	MA0077.1	0.0465
MA0078.1	MA0078.1	0.868
MA0079.2	MA0079.2	0.569
MA0080.2	MA0080.2	5.41382e-6
MA0081.1	MA0081.1	0.051
MA0083.1	MA0083.1	0.0411
MA0084.1	MA0084.1	0.216
MA0087.1	MA0087.1	0.105
MA0088.1	MA0088.1	0.18
MA0090.1	MA0090.1	0.685
MA0091.1	MA0091.1	0.443
MA0092.1	MA0092.1	0.232
MA0093.1	MA0093.1	0.357
MA0099.2	MA0099.2	7.83788e-20
MA0100.1	MA0100.1	0.668
MA0101.1	MA0101.1	0.00217
MA0102.2	MA0102.2	0.381
MA0103.1	MA0103.1	0.0925
MA0104.2	MA0104.2	0.273
MA0105.1	MA0105.1	3.08246e-5
MA0106.1	MA0106.1	0.0124
MA0107.1	MA0107.1	0.00163
MA0108.2	MA0108.2	0.453
MA0111.1	MA0111.1	0.598
MA0112.2	MA0112.2	5.35386e-4
MA0113.1	MA0113.1	0.963
MA0114.1	MA0114.1	0.0097
MA0115.1	MA0115.1	0.633
MA0116.1	MA0116.1	0.0023
MA0117.1	MA0117.1	0.792
MA0119.1	MA0119.1	0.163
MA0122.1	MA0122.1	0.635
MA0124.1	MA0124.1	0.75
MA0125.1	MA0125.1	0.214
MA0131.1	MA0131.1	0.948
MA0135.1	MA0135.1	0.00612
MA0136.1	MA0136.1	1.7919e-9
MA0137.2	MA0137.2	0.062
MA0138.2	MA0138.2	0.398
MA0139.1	MA0139.1	0.566
MA0140.1	MA0140.1	0.00534
MA0141.1	MA0141.1	0.0062
MA0142.1	MA0142.1	0.291
MA0143.1	MA0143.1	0.0924
MA0144.1	MA0144.1	0.89
MA0145.1	MA0145.1	0.43
MA0146.1	MA0146.1	0.0296
MA0147.1	MA0147.1	0.125
MA0148.1	MA0148.1	0.487
MA0149.1	MA0149.1	0.0157
MA0150.1	MA0150.1	1.18199e-4
MA0152.1	MA0152.1	0.279
MA0153.1	MA0153.1	0.584
MA0154.1	MA0154.1	0.0346
MA0155.1	MA0155.1	0.652
MA0156.1	MA0156.1	2.73633e-6
MA0157.1	MA0157.1	0.826
MA0159.1	MA0159.1	0.0119
MA0160.1	MA0160.1	0.0291
MA0162.1	MA0162.1	0.161
MA0163.1	MA0163.1	9.18354e-9
MA0164.1	MA0164.1	0.542
MA0258.1	MA0258.1	0.0121
MA0259.1	MA0259.1	0.502

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12315

Novel motif	Logo	P-value
1	1	0.038
10	10	0.0378
100	100	0.358
101	101	0.705
102	102	0.96
103	103	0.0502
104	104	0.0961
105	105	0.235
106	106	0.0299
107	107	0.153
108	108	0.789
109	109	0.00392
11	11	0.00798
110	110	0.0525
111	111	0.0547
112	112	0.391
113	113	0.31
114	114	0.0672
115	115	0.897
116	116	0.21
117	117	0.0108
118	118	0.152
119	119	0.23
12	12	0.621
120	120	0.132
121	121	0.718
122	122	0.989
123	123	0.834
124	124	0.283
125	125	0.361
126	126	0.0673
127	127	0.406
128	128	0.211
129	129	0.519
13	13	0.00584
130	130	0.417
131	131	0.0232
132	132	0.427
133	133	0.165
134	134	0.567
135	135	0.272
136	136	0.00496
137	137	0.829
138	138	0.729
139	139	0.0878
14	14	0.97
140	140	0.569
141	141	0.478
142	142	0.963
143	143	0.00847
144	144	0.954
145	145	0.212
146	146	0.694
147	147	0.788
148	148	0.188
149	149	0.107
15	15	0.0452
150	150	0.126
151	151	0.723
152	152	0.126
153	153	0.948
154	154	0.547
155	155	0.477
156	156	0.256
157	157	0.35
158	158	0.248
159	159	0.00729
16	16	0.0429
160	160	0.204
161	161	0.2
162	162	0.785
163	163	0.737
164	164	0.0132
165	165	0.215
166	166	0.722
167	167	0.632
168	168	0.72
169	169	0.0156
17	17	0.0825
18	18	0.0353
19	19	0.336
2	2	0.944
20	20	0.144
21	21	0.0304
22	22	0.311
23	23	0.563
24	24	0.117
25	25	0.565
26	26	7.91909e-4
27	27	0.637
28	28	0.822
29	29	0.00595
3	3	0.05
30	30	0.625
31	31	0.911
32	32	0.0104
33	33	0.084
34	34	0.785
35	35	0.442
36	36	0.169
37	37	0.0506
38	38	0.437
39	39	0.418
4	4	0.632
40	40	0.0783
41	41	0.178
42	42	0.227
43	43	0.124
44	44	0.112
45	45	0.821
46	46	0.0252
47	47	0.0389
48	48	0.0462
49	49	0.246
5	5	0.63
50	50	0.498
51	51	0.282
52	52	0.787
53	53	0.668
54	54	0.407
55	55	0.772
56	56	0.585
57	57	0.261
58	58	0.347
59	59	0.0922
6	6	0.937
60	60	0.117
61	61	0.136
62	62	0.166
63	63	0.24
64	64	0.143
65	65	0.287
66	66	0.0918
67	67	0.328
68	68	0.116
69	69	0.202
7	7	0.119
70	70	0.022
71	71	0.008
72	72	0.46
73	73	0.0472
74	74	0.94
75	75	0.0173
76	76	0.176
77	77	0.297
78	78	4.63738e-4
79	79	0.266
8	8	0.0514
80	80	0.827
81	81	0.499
82	82	0.637
83	83	0.0806
84	84	0.467
85	85	0.318
86	86	0.175
87	87	0.00105
88	88	0.74
89	89	0.158
9	9	0.58
90	90	0.057
91	91	0.552
92	92	0.514
93	93	0.756
94	94	0.101
95	95	0.0257
96	96	0.981
97	97	0.769
98	98	0.152
99	99	0.683

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12315

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010038 human medulla oblongata - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001896 (medulla oblongata)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0004733 (segmental subdivision of hindbrain)
0004732 (segmental subdivision of nervous system)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0002298 (brainstem)
0002028 (hindbrain)
0005290 (myelencephalon)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010038 (human medulla oblongata - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10155-103A2
+|DRA_sample_Accession=CAGE@SAMD00005583
-|name=medulla oblongata, adult, donor10252
+|HumanCAGEScanFiles=NCig10027;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medulla%2520oblongata%252c%2520adult%252c%2520donor10252.NCig10027.10155-103A2.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medulla%2520oblongata%252c%2520adult%252c%2520donor10252.NCig10027.10155-103A2.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medulla%2520oblongata%252c%2520adult%252c%2520donor10252.NCig10027.10155-103A2.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medulla%2520oblongata%252c%2520adult%252c%2520donor10252.NCig10027.10155-103A2.hg19.GCTATA.pairs.bed.gz
-|sample_id=10155
+|accession_numbers=CAGE;DRX008687;DRR009559;DRZ000984;DRZ002369;DRZ012334;DRZ013719
-|rna_tube_id=103A2
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001896,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0004733,UBERON:0004732,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0002298,UBERON:0002028,UBERON:0005290
-|rna_box=103
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
-|rna_position=A2
-|sample_cell_lot=NA
-|sample_cell_catalog=NA
-|sample_company=
-|rna_lot_number=
-|rna_catalog_number=
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=
-|sample_tissue=medulla oblongata
-|sample_donor(cell lot)=donor: 10252
-|sample_sex=female
-|sample_age=76
-|sample_ethnicity=
-|rna_rin=
-|rna_od260/230=2.21
-|rna_od260/280=2.1
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=Peter Heutink
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
-|rna_weight_ug=51.3536
-|rna_concentration=1.28384
-|sample_note=
-|profile_hcage=CNhs12315,LSID913,release011,COMPLETED
-|profile_cagescan=NCig10027,,,
-|profile_srnaseq=,,,
-|profile_rnaseq=,,,
-|ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001896,UBERON:0002028,UBERON:0002050,UBERON:0002298,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0003057,UBERON:0003075,UBERON:0003076,UBERON:0004121,UBERON:0004732,UBERON:0004733,UBERON:0005068,UBERON:0005290,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010038
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001896;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002028;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002298
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 42: @@
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+|rna_concentration=1.28384
+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
+|rna_lot_number=
+|rna_od260/230=2.21
+|rna_od260/280=2.1
+|rna_position=A2
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=103A2
+|rna_weight_ug=51.3536
+|sample_age=76
+|sample_category=tissues
+|sample_cell_catalog=NA
+|sample_cell_line=
+|sample_cell_lot=NA
+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=Peter Heutink
+|sample_company=
+|sample_description=
+|sample_dev_stage=
+|sample_disease=
+|sample_donor(cell lot)=donor: 10252
+|sample_ethnicity=
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.13572864593516e-266!GO:0005737;cytoplasm;3.99723161096186e-157!GO:0043226;organelle;2.40897414082328e-104!GO:0043229;intracellular organelle;5.25604173531237e-104!GO:0043227;membrane-bound organelle;1.9838600293805e-96!GO:0043231;intracellular membrane-bound organelle;2.54727285652474e-96!GO:0044444;cytoplasmic part;2.66331938885391e-96!GO:0005515;protein binding;1.28124212415712e-74!GO:0044422;organelle part;3.97987493938181e-63!GO:0044446;intracellular organelle part;4.38524301549323e-62!GO:0032991;macromolecular complex;9.31840850277743e-53!GO:0016043;cellular component organization and biogenesis;3.12020378411907e-45!GO:0033036;macromolecule localization;4.16546561042225e-37!GO:0003723;RNA binding;5.20654956076665e-36!GO:0030529;ribonucleoprotein complex;9.58678408033714e-36!GO:0015031;protein transport;1.94950159781425e-35!GO:0005739;mitochondrion;1.50911367726658e-34!GO:0008104;protein localization;4.98999034871972e-34!GO:0045184;establishment of protein localization;2.72250463932301e-33!GO:0031090;organelle membrane;4.32606468926087e-33!GO:0043233;organelle lumen;5.80984001545297e-33!GO:0031974;membrane-enclosed lumen;5.80984001545297e-33!GO:0044428;nuclear part;3.16628669300337e-32!GO:0046907;intracellular transport;4.99706293419414e-30!GO:0044238;primary metabolic process;5.6852035256058e-30!GO:0043234;protein complex;4.27887725289241e-29!GO:0044237;cellular metabolic process;7.17401837590406e-29!GO:0016071;mRNA metabolic process;6.06454092810658e-27!GO:0051649;establishment of cellular localization;5.80395654879413e-26!GO:0051641;cellular localization;1.47365777479261e-25!GO:0043170;macromolecule metabolic process;1.56604646184641e-25!GO:0005634;nucleus;1.56604646184641e-25!GO:0016192;vesicle-mediated transport;3.288866988676e-25!GO:0031975;envelope;6.63590760143335e-25!GO:0044429;mitochondrial part;7.32759344095464e-25!GO:0031967;organelle envelope;7.8259677385725e-25!GO:0008380;RNA splicing;1.19874278379937e-23!GO:0005829;cytosol;2.65195575636353e-23!GO:0019538;protein metabolic process;2.76819801198329e-23!GO:0006396;RNA processing;2.92608713025145e-22!GO:0006886;intracellular protein transport;1.50588555244568e-21!GO:0006397;mRNA processing;1.50588555244568e-21!GO:0044260;cellular macromolecule metabolic process;6.64636174497982e-20!GO:0031981;nuclear lumen;1.24964140164316e-19!GO:0044267;cellular protein metabolic process;6.20398083081011e-19!GO:0006996;organelle organization and biogenesis;1.26825493963309e-18!GO:0006119;oxidative phosphorylation;3.54434363809789e-18!GO:0005740;mitochondrial envelope;4.37430309676312e-18!GO:0065003;macromolecular complex assembly;1.01393122367643e-17!GO:0031966;mitochondrial membrane;1.57632388284053e-17!GO:0005840;ribosome;1.64089347800043e-17!GO:0005794;Golgi apparatus;1.93784655249431e-17!GO:0019866;organelle inner membrane;3.0465951439525e-17!GO:0031982;vesicle;4.91486305068946e-17!GO:0048770;pigment granule;1.21217712348165e-16!GO:0042470;melanosome;1.21217712348165e-16!GO:0031410;cytoplasmic vesicle;2.36273285657173e-16!GO:0005743;mitochondrial inner membrane;2.9062154193118e-16!GO:0006412;translation;3.8976285978374e-16!GO:0000166;nucleotide binding;5.37588184226368e-16!GO:0005681;spliceosome;5.57508169828812e-16!GO:0022607;cellular component assembly;1.10257763560251e-15!GO:0009058;biosynthetic process;1.60174101827424e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.54900285599263e-15!GO:0031988;membrane-bound vesicle;5.55503133959945e-15!GO:0016462;pyrophosphatase activity;6.88169376414563e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;7.00628329775325e-15!GO:0016023;cytoplasmic membrane-bound vesicle;2.20339089894982e-14!GO:0017111;nucleoside-triphosphatase activity;3.98692666204044e-14!GO:0043283;biopolymer metabolic process;7.38270056014136e-14!GO:0003735;structural constituent of ribosome;1.80635150566964e-13!GO:0005654;nucleoplasm;2.70661967736007e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.70661967736007e-13!GO:0044455;mitochondrial membrane part;3.88080070231206e-13!GO:0009059;macromolecule biosynthetic process;5.89421668143193e-13!GO:0050136;NADH dehydrogenase (quinone) activity;7.20996045660425e-13!GO:0003954;NADH dehydrogenase activity;7.20996045660425e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.20996045660425e-13!GO:0012505;endomembrane system;7.73876685942113e-13!GO:0005746;mitochondrial respiratory chain;7.73876685942113e-13!GO:0010467;gene expression;9.35540751863005e-13!GO:0008134;transcription factor binding;2.78808183443028e-12!GO:0006457;protein folding;3.2158509183997e-12!GO:0044451;nucleoplasm part;3.70324951646921e-12!GO:0044249;cellular biosynthetic process;5.68483664595749e-12!GO:0008092;cytoskeletal protein binding;1.34540773482819e-11!GO:0033279;ribosomal subunit;1.37624607135422e-11!GO:0043228;non-membrane-bound organelle;2.77567604676226e-11!GO:0043232;intracellular non-membrane-bound organelle;2.77567604676226e-11!GO:0032553;ribonucleotide binding;3.41468348056562e-11!GO:0032555;purine ribonucleotide binding;3.41468348056562e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;3.45190253849558e-11!GO:0005783;endoplasmic reticulum;3.52358975524458e-11!GO:0016874;ligase activity;3.75445478751026e-11!GO:0006511;ubiquitin-dependent protein catabolic process;4.37531858899233e-11!GO:0030964;NADH dehydrogenase complex (quinone);5.76001248280612e-11!GO:0045271;respiratory chain complex I;5.76001248280612e-11!GO:0005747;mitochondrial respiratory chain complex I;5.76001248280612e-11!GO:0019941;modification-dependent protein catabolic process;5.9131943921197e-11!GO:0043632;modification-dependent macromolecule catabolic process;5.9131943921197e-11!GO:0044265;cellular macromolecule catabolic process;6.87383693124912e-11!GO:0044257;cellular protein catabolic process;7.18883876811677e-11!GO:0017076;purine nucleotide binding;9.81593320392974e-11!GO:0048193;Golgi vesicle transport;1.06215386526197e-10!GO:0042775;organelle ATP synthesis coupled electron transport;1.47866845931878e-10!GO:0042773;ATP synthesis coupled electron transport;1.47866845931878e-10!GO:0048523;negative regulation of cellular process;1.56742921252282e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.65218207110265e-10!GO:0051082;unfolded protein binding;1.6545622447909e-10!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.74926346030585e-10!GO:0030695;GTPase regulator activity;1.88790393377237e-10!GO:0006512;ubiquitin cycle;2.83357901990487e-10!GO:0005768;endosome;3.58672891986723e-10!GO:0022618;protein-RNA complex assembly;3.94027764879612e-10!GO:0003924;GTPase activity;7.13415349786728e-10!GO:0007010;cytoskeleton organization and biogenesis;1.17632225865194e-09!GO:0006605;protein targeting;1.50244303288148e-09!GO:0007264;small GTPase mediated signal transduction;1.85697080754822e-09!GO:0006461;protein complex assembly;1.87000792714759e-09!GO:0044445;cytosolic part;2.04672250536776e-09!GO:0030036;actin cytoskeleton organization and biogenesis;2.25342249315879e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.43802722420546e-09!GO:0043412;biopolymer modification;2.47598513577706e-09!GO:0016044;membrane organization and biogenesis;2.4907976979846e-09!GO:0031980;mitochondrial lumen;2.89955495050386e-09!GO:0005759;mitochondrial matrix;2.89955495050386e-09!GO:0000502;proteasome complex (sensu Eukaryota);3.62693331421046e-09!GO:0008565;protein transporter activity;4.01724374623668e-09!GO:0006464;protein modification process;5.61159768442507e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.65089714605784e-09!GO:0043687;post-translational protein modification;5.71910770461238e-09!GO:0045045;secretory pathway;6.74589272052572e-09!GO:0016604;nuclear body;7.49608313443878e-09!GO:0008135;translation factor activity, nucleic acid binding;7.65222934264248e-09!GO:0043285;biopolymer catabolic process;7.70266546061026e-09!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.95549719632075e-09!GO:0019899;enzyme binding;1.13134699850855e-08!GO:0048519;negative regulation of biological process;1.20166387634977e-08!GO:0044248;cellular catabolic process;1.54573405946072e-08!GO:0019829;cation-transporting ATPase activity;1.54573405946072e-08!GO:0005525;GTP binding;1.58034040642563e-08!GO:0005083;small GTPase regulator activity;1.67923878351061e-08!GO:0016607;nuclear speck;2.19972781723732e-08!GO:0031252;leading edge;2.51060498844934e-08!GO:0030029;actin filament-based process;3.50089480996961e-08!GO:0030163;protein catabolic process;4.54890536294293e-08!GO:0015630;microtubule cytoskeleton;9.05673758412186e-08!GO:0006793;phosphorus metabolic process;9.11851934699289e-08!GO:0006796;phosphate metabolic process;9.11851934699289e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.1805052545501e-07!GO:0009057;macromolecule catabolic process;1.39769327191594e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.5008275790729e-07!GO:0000375;RNA splicing, via transesterification reactions;1.5008275790729e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.5008275790729e-07!GO:0005635;nuclear envelope;1.57085103026095e-07!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.75964211042592e-07!GO:0006446;regulation of translational initiation;2.3300366740446e-07!GO:0012501;programmed cell death;3.74568080308373e-07!GO:0006897;endocytosis;3.86888844892409e-07!GO:0010324;membrane invagination;3.86888844892409e-07!GO:0032561;guanyl ribonucleotide binding;3.86888844892409e-07!GO:0019001;guanyl nucleotide binding;3.86888844892409e-07!GO:0006810;transport;3.86888844892409e-07!GO:0008219;cell death;4.27804936075114e-07!GO:0016265;death;4.27804936075114e-07!GO:0031965;nuclear membrane;4.31396278160067e-07!GO:0006915;apoptosis;4.4116321209864e-07!GO:0006913;nucleocytoplasmic transport;5.16503509988229e-07!GO:0015986;ATP synthesis coupled proton transport;5.94348535792858e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.94348535792858e-07!GO:0015935;small ribosomal subunit;6.89357860505006e-07!GO:0003779;actin binding;6.94882506186851e-07!GO:0032940;secretion by cell;8.55678458348279e-07!GO:0051179;localization;9.37141474772273e-07!GO:0051169;nuclear transport;9.37813181974722e-07!GO:0003712;transcription cofactor activity;1.01386426160498e-06!GO:0051186;cofactor metabolic process;1.02907072675927e-06!GO:0016564;transcription repressor activity;1.16165760717585e-06!GO:0044431;Golgi apparatus part;1.22247758421988e-06!GO:0044432;endoplasmic reticulum part;1.73141688348501e-06!GO:0003743;translation initiation factor activity;2.0512574030056e-06!GO:0048475;coated membrane;2.08759520083334e-06!GO:0030117;membrane coat;2.08759520083334e-06!GO:0006413;translational initiation;2.27624111310598e-06!GO:0005730;nucleolus;2.6300945314586e-06!GO:0008047;enzyme activator activity;2.9761756217773e-06!GO:0044440;endosomal part;3.08958425987432e-06!GO:0010008;endosome membrane;3.08958425987432e-06!GO:0032559;adenyl ribonucleotide binding;3.17961641104876e-06!GO:0005769;early endosome;3.72748413373752e-06!GO:0015631;tubulin binding;3.95562628167686e-06!GO:0005524;ATP binding;4.44810744661988e-06!GO:0045333;cellular respiration;4.48127976904673e-06!GO:0009060;aerobic respiration;4.62700074318663e-06!GO:0005773;vacuole;4.86225572955513e-06!GO:0016887;ATPase activity;4.9688785499182e-06!GO:0006366;transcription from RNA polymerase II promoter;5.43567590485471e-06!GO:0008639;small protein conjugating enzyme activity;5.52377523927408e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.68679843577952e-06!GO:0005793;ER-Golgi intermediate compartment;5.90921696653122e-06!GO:0048471;perinuclear region of cytoplasm;6.21090463317689e-06!GO:0005096;GTPase activator activity;6.38786975473492e-06!GO:0045786;negative regulation of progression through cell cycle;6.51074065824941e-06!GO:0046034;ATP metabolic process;6.77908616208024e-06!GO:0016070;RNA metabolic process;6.83728048557004e-06!GO:0004842;ubiquitin-protein ligase activity;7.18109447313081e-06!GO:0005874;microtubule;7.45223207064704e-06!GO:0005770;late endosome;7.93638439565451e-06!GO:0030554;adenyl nucleotide binding;7.94316306490175e-06!GO:0019787;small conjugating protein ligase activity;8.70231677778363e-06!GO:0016310;phosphorylation;8.92245295751427e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.04380575300048e-05!GO:0009150;purine ribonucleotide metabolic process;1.16673238238348e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.26873632216076e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.26873632216076e-05!GO:0050794;regulation of cellular process;1.37992527634088e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.56451485086055e-05!GO:0017038;protein import;1.64161595009722e-05!GO:0050789;regulation of biological process;1.64161595009722e-05!GO:0015934;large ribosomal subunit;1.67211271047515e-05!GO:0006754;ATP biosynthetic process;1.67211271047515e-05!GO:0006753;nucleoside phosphate metabolic process;1.67211271047515e-05!GO:0006163;purine nucleotide metabolic process;1.68647478506037e-05!GO:0051234;establishment of localization;1.68647478506037e-05!GO:0009055;electron carrier activity;2.02934743627681e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.33346076148289e-05!GO:0042623;ATPase activity, coupled;2.40515123792867e-05!GO:0009141;nucleoside triphosphate metabolic process;2.42308698236748e-05!GO:0006099;tricarboxylic acid cycle;2.59801358030199e-05!GO:0046356;acetyl-CoA catabolic process;2.59801358030199e-05!GO:0007265;Ras protein signal transduction;2.91832919962105e-05!GO:0030027;lamellipodium;2.92432183651306e-05!GO:0005905;coated pit;3.03386974790204e-05!GO:0030135;coated vesicle;3.09528262427794e-05!GO:0051246;regulation of protein metabolic process;3.12930011299146e-05!GO:0000323;lytic vacuole;3.2872016947526e-05!GO:0005764;lysosome;3.2872016947526e-05!GO:0007242;intracellular signaling cascade;3.40299360086089e-05!GO:0009259;ribonucleotide metabolic process;3.40811264457789e-05!GO:0000902;cell morphogenesis;3.43101253502787e-05!GO:0032989;cellular structure morphogenesis;3.43101253502787e-05!GO:0006164;purine nucleotide biosynthetic process;3.51578807515865e-05!GO:0008287;protein serine/threonine phosphatase complex;3.56336000994876e-05!GO:0051128;regulation of cellular component organization and biogenesis;3.85341091400947e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.85341091400947e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.85341091400947e-05!GO:0016881;acid-amino acid ligase activity;3.98116525835824e-05!GO:0009142;nucleoside triphosphate biosynthetic process;4.77933073836845e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.77933073836845e-05!GO:0005761;mitochondrial ribosome;5.11173653781436e-05!GO:0000313;organellar ribosome;5.11173653781436e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.30530702750573e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.67243186505226e-05!GO:0006732;coenzyme metabolic process;5.68805012924406e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.7760875633458e-05!GO:0045259;proton-transporting ATP synthase complex;5.94773416066541e-05!GO:0009109;coenzyme catabolic process;5.94773416066541e-05!GO:0003714;transcription corepressor activity;6.18358239167534e-05!GO:0043069;negative regulation of programmed cell death;6.6390178797031e-05!GO:0005789;endoplasmic reticulum membrane;7.82824859252724e-05!GO:0043066;negative regulation of apoptosis;8.42345911989097e-05!GO:0044453;nuclear membrane part;8.72946004167112e-05!GO:0009056;catabolic process;8.90841503940478e-05!GO:0015078;hydrogen ion transmembrane transporter activity;9.71902563452687e-05!GO:0051187;cofactor catabolic process;0.000102341810362037!GO:0006916;anti-apoptosis;0.000106397884438247!GO:0000139;Golgi membrane;0.000106635339176022!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00010711394362627!GO:0006084;acetyl-CoA metabolic process;0.000113117888965573!GO:0000245;spliceosome assembly;0.00011392494573812!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000123957509726413!GO:0015399;primary active transmembrane transporter activity;0.000123957509726413!GO:0048468;cell development;0.000128091506629295!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000130055041630804!GO:0009260;ribonucleotide biosynthetic process;0.000133478709076541!GO:0009966;regulation of signal transduction;0.000143881329776466!GO:0030120;vesicle coat;0.000144187996512968!GO:0030662;coated vesicle membrane;0.000144187996512968!GO:0008017;microtubule binding;0.000152484469048094!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.000160128210850125!GO:0016568;chromatin modification;0.000174299165074346!GO:0031072;heat shock protein binding;0.000194400975645278!GO:0009892;negative regulation of metabolic process;0.000202804416246538!GO:0043492;ATPase activity, coupled to movement of substances;0.000206619115227936!GO:0006613;cotranslational protein targeting to membrane;0.000212453317629414!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000231643488273142!GO:0001726;ruffle;0.000267359498058161!GO:0006606;protein import into nucleus;0.000274641759237619!GO:0006888;ER to Golgi vesicle-mediated transport;0.000277861518323978!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000287045208434603!GO:0051170;nuclear import;0.000313318020426209!GO:0005798;Golgi-associated vesicle;0.000316724419359058!GO:0005875;microtubule associated complex;0.00037304246978159!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000393356013028115!GO:0031901;early endosome membrane;0.000434314177766322!GO:0030867;rough endoplasmic reticulum membrane;0.000436375090495627!GO:0006403;RNA localization;0.000436777258459292!GO:0015980;energy derivation by oxidation of organic compounds;0.000462417420859584!GO:0016197;endosome transport;0.000466351162221112!GO:0042802;identical protein binding;0.000502639215173133!GO:0008286;insulin receptor signaling pathway;0.000510774272944282!GO:0050657;nucleic acid transport;0.000510774272944282!GO:0051236;establishment of RNA localization;0.000510774272944282!GO:0050658;RNA transport;0.000510774272944282!GO:0043623;cellular protein complex assembly;0.000521718000423691!GO:0005643;nuclear pore;0.000536052118953047!GO:0016481;negative regulation of transcription;0.000536056685097535!GO:0008361;regulation of cell size;0.000545469835353873!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000556453882461076!GO:0022890;inorganic cation transmembrane transporter activity;0.000562354223733996!GO:0019717;synaptosome;0.000584891641814928!GO:0006323;DNA packaging;0.000614545998717241!GO:0005791;rough endoplasmic reticulum;0.000632894982834818!GO:0030133;transport vesicle;0.000655281628032893!GO:0008654;phospholipid biosynthetic process;0.000665938748440223!GO:0000151;ubiquitin ligase complex;0.000717489997692293!GO:0006752;group transfer coenzyme metabolic process;0.000766291069361278!GO:0008154;actin polymerization and/or depolymerization;0.000766783654536055!GO:0000159;protein phosphatase type 2A complex;0.000853310045613273!GO:0003729;mRNA binding;0.000880215750311966!GO:0031324;negative regulation of cellular metabolic process;0.000880215750311966!GO:0030118;clathrin coat;0.000905870754168813!GO:0032446;protein modification by small protein conjugation;0.000929054982784921!GO:0051789;response to protein stimulus;0.000939937408518773!GO:0006986;response to unfolded protein;0.000939937408518773!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00094017520457893!GO:0004812;aminoacyl-tRNA ligase activity;0.00094017520457893!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00094017520457893!GO:0051056;regulation of small GTPase mediated signal transduction;0.00103698561066708!GO:0016049;cell growth;0.0010645717236424!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00106516488786245!GO:0043566;structure-specific DNA binding;0.00111969799962648!GO:0006607;NLS-bearing substrate import into nucleus;0.00121256158694964!GO:0007243;protein kinase cascade;0.00121256158694964!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0012510960853903!GO:0006259;DNA metabolic process;0.00140439121327873!GO:0005085;guanyl-nucleotide exchange factor activity;0.00140484919560362!GO:0001666;response to hypoxia;0.00157264193565058!GO:0016567;protein ubiquitination;0.00157914912897317!GO:0019904;protein domain specific binding;0.00160896354329645!GO:0065007;biological regulation;0.00161054831152145!GO:0016791;phosphoric monoester hydrolase activity;0.00162517707400703!GO:0045892;negative regulation of transcription, DNA-dependent;0.00167018171220508!GO:0030532;small nuclear ribonucleoprotein complex;0.00168835028965664!GO:0003676;nucleic acid binding;0.00169694015673688!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00173160124039074!GO:0008601;protein phosphatase type 2A regulator activity;0.00174804305414234!GO:0005938;cell cortex;0.00176386702964903!GO:0043038;amino acid activation;0.00178240541441598!GO:0006418;tRNA aminoacylation for protein translation;0.00178240541441598!GO:0043039;tRNA aminoacylation;0.00178240541441598!GO:0051726;regulation of cell cycle;0.00188553543479728!GO:0005839;proteasome core complex (sensu Eukaryota);0.00192347042658369!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00194532022506564!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00204909190850765!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00205946511872171!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00206261388705454!GO:0003724;RNA helicase activity;0.00207416224415359!GO:0007272;ensheathment of neurons;0.00211271478955597!GO:0008366;axon ensheathment;0.00211271478955597!GO:0007019;microtubule depolymerization;0.00214074573752097!GO:0005100;Rho GTPase activator activity;0.00216403367968269!GO:0000074;regulation of progression through cell cycle;0.00219120621643703!GO:0043209;myelin sheath;0.00219520015170285!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00225040434368571!GO:0006402;mRNA catabolic process;0.00233132172344022!GO:0004721;phosphoprotein phosphatase activity;0.00253406620425133!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0026074403438169!GO:0033673;negative regulation of kinase activity;0.00295485305152755!GO:0006469;negative regulation of protein kinase activity;0.00295485305152755!GO:0007049;cell cycle;0.00300560659555684!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00311980143682918!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00311980143682918!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00311980143682918!GO:0006650;glycerophospholipid metabolic process;0.00327042613367181!GO:0006612;protein targeting to membrane;0.00331369902183351!GO:0003713;transcription coactivator activity;0.00342472354043815!GO:0005741;mitochondrial outer membrane;0.00345535366265541!GO:0051188;cofactor biosynthetic process;0.00360129654426577!GO:0031902;late endosome membrane;0.00360814304976457!GO:0007266;Rho protein signal transduction;0.00371361108118887!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00382669717954827!GO:0051087;chaperone binding;0.0039322470966687!GO:0031968;organelle outer membrane;0.00403456896217588!GO:0005813;centrosome;0.00405803415192517!GO:0019867;outer membrane;0.00412990067517976!GO:0046467;membrane lipid biosynthetic process;0.00418874238033696!GO:0016126;sterol biosynthetic process;0.00421427097603621!GO:0042981;regulation of apoptosis;0.00423784740711183!GO:0043067;regulation of programmed cell death;0.00436211365078926!GO:0051920;peroxiredoxin activity;0.00457793879498953!GO:0051028;mRNA transport;0.00458999725967958!GO:0001508;regulation of action potential;0.00464087946783055!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00468918463980626!GO:0030041;actin filament polymerization;0.0049993623015877!GO:0050811;GABA receptor binding;0.00510648146051739!GO:0051348;negative regulation of transferase activity;0.00512152114230455!GO:0005099;Ras GTPase activator activity;0.00519190804523847!GO:0006643;membrane lipid metabolic process;0.00525363891343084!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00538395592961902!GO:0019208;phosphatase regulator activity;0.00539090841926906!GO:0043021;ribonucleoprotein binding;0.00552302940243936!GO:0051261;protein depolymerization;0.00565163515851033!GO:0003697;single-stranded DNA binding;0.00607325840234136!GO:0008139;nuclear localization sequence binding;0.00611642673782725!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00632501696086021!GO:0031114;regulation of microtubule depolymerization;0.00652258129148754!GO:0007026;negative regulation of microtubule depolymerization;0.00652258129148754!GO:0022406;membrane docking;0.00663923416537923!GO:0048278;vesicle docking;0.00663923416537923!GO:0005885;Arp2/3 protein complex;0.00667332023487942!GO:0016311;dephosphorylation;0.0070273185573328!GO:0048487;beta-tubulin binding;0.00709210414438333!GO:0008610;lipid biosynthetic process;0.00709210414438333!GO:0019902;phosphatase binding;0.00712978428639717!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00745766626879873!GO:0004667;prostaglandin-D synthase activity;0.00745766626879873!GO:0050802;circadian sleep/wake cycle, sleep;0.00745766626879873!GO:0022410;circadian sleep/wake cycle process;0.00745766626879873!GO:0042749;regulation of circadian sleep/wake cycle;0.00745766626879873!GO:0030426;growth cone;0.00768297902539889!GO:0008026;ATP-dependent helicase activity;0.00805344094105024!GO:0050767;regulation of neurogenesis;0.00826980288809807!GO:0016050;vesicle organization and biogenesis;0.00833317393595964!GO:0005815;microtubule organizing center;0.00841758765663252!GO:0006904;vesicle docking during exocytosis;0.00851776653407905!GO:0015629;actin cytoskeleton;0.00874615729870936!GO:0004722;protein serine/threonine phosphatase activity;0.00876583593301071!GO:0046578;regulation of Ras protein signal transduction;0.00878837568401209!GO:0030427;site of polarized growth;0.00884517705020785!GO:0004298;threonine endopeptidase activity;0.00896292744083794!GO:0005774;vacuolar membrane;0.00896292744083794!GO:0030136;clathrin-coated vesicle;0.00902689870474829!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00906586481455159!GO:0004386;helicase activity;0.00928715220497166!GO:0005667;transcription factor complex;0.00961700788439105!GO:0007017;microtubule-based process;0.00992405632486137!GO:0012506;vesicle membrane;0.00994716022879983!GO:0001558;regulation of cell growth;0.00995605818415918!GO:0043087;regulation of GTPase activity;0.0100089972647226!GO:0007050;cell cycle arrest;0.0104839080776141!GO:0007399;nervous system development;0.0110326377431695!GO:0048500;signal recognition particle;0.011147444437894!GO:0065009;regulation of a molecular function;0.0114764834134588!GO:0006891;intra-Golgi vesicle-mediated transport;0.0114764834134588!GO:0044448;cell cortex part;0.0116656021043455!GO:0006892;post-Golgi vesicle-mediated transport;0.0121618501638145!GO:0009108;coenzyme biosynthetic process;0.0122699425497791!GO:0030384;phosphoinositide metabolic process;0.0124187321525515!GO:0006401;RNA catabolic process;0.012476703561666!GO:0051168;nuclear export;0.0127634270027977!GO:0046488;phosphatidylinositol metabolic process;0.0127982751453606!GO:0043488;regulation of mRNA stability;0.0128525434842587!GO:0043487;regulation of RNA stability;0.0128525434842587!GO:0016408;C-acyltransferase activity;0.012943646669202!GO:0016363;nuclear matrix;0.0130443544481495!GO:0051427;hormone receptor binding;0.0131313057483727!GO:0035035;histone acetyltransferase binding;0.013594028273523!GO:0006470;protein amino acid dephosphorylation;0.0144938836879432!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0151563207888955!GO:0048154;S100 beta binding;0.0154464500451289!GO:0005868;cytoplasmic dynein complex;0.0155154603896534!GO:0046930;pore complex;0.0158324605201796!GO:0008186;RNA-dependent ATPase activity;0.0158324605201796!GO:0043005;neuron projection;0.0159755698834016!GO:0005869;dynactin complex;0.0167465599551569!GO:0019888;protein phosphatase regulator activity;0.0168003821909382!GO:0051287;NAD binding;0.0171293201188627!GO:0005765;lysosomal membrane;0.0175785994240373!GO:0065002;intracellular protein transport across a membrane;0.0176183970168588!GO:0005665;DNA-directed RNA polymerase II, core complex;0.01774570070927!GO:0044433;cytoplasmic vesicle part;0.017948531355471!GO:0042026;protein refolding;0.0180135541860322!GO:0030742;GTP-dependent protein binding;0.0181405917579513!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0193672483864133!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0195268392812195!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0201512995335599!GO:0030132;clathrin coat of coated pit;0.0207018488658724!GO:0043086;negative regulation of catalytic activity;0.0207262135050565!GO:0008250;oligosaccharyl transferase complex;0.021043660969538!GO:0005788;endoplasmic reticulum lumen;0.021395906879769!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0216145946880172!GO:0033043;regulation of organelle organization and biogenesis;0.0216145946880172!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0216747300693589!GO:0000059;protein import into nucleus, docking;0.0217665630238785!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0218774301688957!GO:0035257;nuclear hormone receptor binding;0.0218774301688957!GO:0051252;regulation of RNA metabolic process;0.0220016957636178!GO:0005856;cytoskeleton;0.02247714686684!GO:0051020;GTPase binding;0.0224778311499591!GO:0007034;vacuolar transport;0.0224778311499591!GO:0016301;kinase activity;0.0234222941849328!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0234360073994633!GO:0005048;signal sequence binding;0.0238965238436829!GO:0033116;ER-Golgi intermediate compartment membrane;0.0249397826651335!GO:0004674;protein serine/threonine kinase activity;0.0249430709373788!GO:0017166;vinculin binding;0.0253165729714432!GO:0030658;transport vesicle membrane;0.0255231914157562!GO:0051276;chromosome organization and biogenesis;0.025532717987631!GO:0042552;myelination;0.0259762984455882!GO:0030137;COPI-coated vesicle;0.0260443792520435!GO:0006644;phospholipid metabolic process;0.0261405028384914!GO:0003746;translation elongation factor activity;0.0265098776211342!GO:0004860;protein kinase inhibitor activity;0.0266263228148065!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0267217953463014!GO:0003690;double-stranded DNA binding;0.0267856416111565!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0270940326859837!GO:0030119;AP-type membrane coat adaptor complex;0.0271263518599922!GO:0001887;selenium metabolic process;0.0285564564519677!GO:0006695;cholesterol biosynthetic process;0.0285923305099438!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0290951682180084!GO:0045047;protein targeting to ER;0.0290951682180084!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0291165181540798!GO:0008022;protein C-terminus binding;0.0300593653261173!GO:0044437;vacuolar part;0.0304054501357233!GO:0016859;cis-trans isomerase activity;0.0308297735592047!GO:0006414;translational elongation;0.0316284355919219!GO:0031124;mRNA 3'-end processing;0.0317037168184261!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0317037168184261!GO:0030320;cellular monovalent inorganic anion homeostasis;0.032234781175005!GO:0055083;monovalent inorganic anion homeostasis;0.032234781175005!GO:0055064;chloride ion homeostasis;0.032234781175005!GO:0030644;cellular chloride ion homeostasis;0.032234781175005!GO:0030659;cytoplasmic vesicle membrane;0.0322539938802991!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0336147145148097!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0336147145148097!GO:0016563;transcription activator activity;0.0336147145148097!GO:0006376;mRNA splice site selection;0.0339876086641969!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0339876086641969!GO:0030131;clathrin adaptor complex;0.0357526191288181!GO:0004004;ATP-dependent RNA helicase activity;0.0372044734508951!GO:0000062;acyl-CoA binding;0.0378843869992665!GO:0000118;histone deacetylase complex;0.0385681031420884!GO:0030660;Golgi-associated vesicle membrane;0.0388978939469022!GO:0019783;small conjugating protein-specific protease activity;0.0389353003726839!GO:0030031;cell projection biogenesis;0.0390938516919564!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0391688135380044!GO:0042254;ribosome biogenesis and assembly;0.0391688135380044!GO:0009117;nucleotide metabolic process;0.0393413163946804!GO:0007005;mitochondrion organization and biogenesis;0.0393696303975426!GO:0043681;protein import into mitochondrion;0.0394635920639919!GO:0004576;oligosaccharyl transferase activity;0.0395582283359407!GO:0005545;phosphatidylinositol binding;0.0397168643787025!GO:0051540;metal cluster binding;0.0398264422412533!GO:0051536;iron-sulfur cluster binding;0.0398264422412533!GO:0005092;GDP-dissociation inhibitor activity;0.0399951896304001!GO:0019911;structural constituent of myelin sheath;0.0400356231844313!GO:0015682;ferric iron transport;0.040184082414995!GO:0015091;ferric iron transmembrane transporter activity;0.040184082414995!GO:0031643;positive regulation of myelination;0.040184082414995!GO:0019752;carboxylic acid metabolic process;0.0402151419634675!GO:0003702;RNA polymerase II transcription factor activity;0.0405562094734448!GO:0045893;positive regulation of transcription, DNA-dependent;0.0406638205333622!GO:0006383;transcription from RNA polymerase III promoter;0.0406943432273337!GO:0046474;glycerophospholipid biosynthetic process;0.0421578685649531!GO:0006091;generation of precursor metabolites and energy;0.0436486674609582!GO:0030569;chymotrypsin inhibitor activity;0.0437355182868987!GO:0030663;COPI coated vesicle membrane;0.0437355182868987!GO:0030126;COPI vesicle coat;0.0437355182868987!GO:0030258;lipid modification;0.0437355182868987!GO:0004843;ubiquitin-specific protease activity;0.0439546345405126!GO:0032535;regulation of cellular component size;0.0450367697723263!GO:0046983;protein dimerization activity;0.0451172183317761!GO:0030139;endocytic vesicle;0.0461961251913245!GO:0016579;protein deubiquitination;0.0463081826065364!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0466724405705625!GO:0008312;7S RNA binding;0.0470703433449288!GO:0030911;TPR domain binding;0.0475664024235683!GO:0019894;kinesin binding;0.0476025830350925!GO:0035258;steroid hormone receptor binding;0.0476025830350925!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0485687494446708!GO:0044255;cellular lipid metabolic process;0.0489604583966031!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0491069197513145!GO:0042578;phosphoric ester hydrolase activity;0.0496649085700574!GO:0030641;cellular hydrogen ion homeostasis;0.0499042089718045!GO:0051539;4 iron, 4 sulfur cluster binding;0.0499183300679519
+|sample_id=10155
+|sample_note=
+|sample_sex=female
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=medulla oblongata
+|top_motifs=RFX2..5_RFXANK_RFXAP:3.35402022597;SOX5:3.13888673658;SOX2:3.13212463086;RFX1:2.98752516276;NKX3-2:2.93277337547;NFIX:2.88309955897;GATA4:2.81923920462;SOX{8,9,10}:2.64591443658;MYFfamily:2.58886456632;REST:2.54068302456;ZFP161:2.4547490586;PRDM1:2.41299572181;MTF1:2.38653085873;GTF2I:2.27765027001;PATZ1:2.24345534541;RREB1:2.21233386405;NHLH1,2:2.19530005357;EP300:2.19186639516;MED-1{core}:2.17221346442;BPTF:2.11263123415;CUX2:2.11119136634;NR3C1:2.08952561401;FOXO1,3,4:2.04821422956;DBP:1.98520810236;OCT4_SOX2{dimer}:1.95525512771;ATF2:1.92453186429;MTE{core}:1.91220363692;HIC1:1.8786165105;MZF1:1.85678521983;TFAP2B:1.85380102087;PRRX1,2:1.84943131323;MYBL2:1.83280861871;PAX6:1.81830336384;TGIF1:1.79842304767;KLF4:1.79021096483;SP1:1.78133810983;LMO2:1.78104235995;FOXD3:1.76609399269;POU6F1:1.74822726227;MAZ:1.73993039868;EBF1:1.73478858309;AR:1.72227200893;FOX{D1,D2}:1.69409036707;ZBTB6:1.68417338001;POU5F1:1.57505967332;SOX17:1.55620496409;HOX{A6,A7,B6,B7}:1.51508661651;SMAD1..7,9:1.50248919595;GCM1,2:1.49887464484;HSF1,2:1.47614470466;HBP1_HMGB_SSRP1_UBTF:1.45197533471;GFI1B:1.44900170064;EGR1..3:1.44594571578;ZNF423:1.44160428153;FOXP1:1.44155082554;RBPJ:1.40435419287;NANOG:1.32404666189;SREBF1,2:1.31530909159;FOXP3:1.27975813052;ZIC1..3:1.25644638218;STAT1,3:1.25440474623;XBP1:1.24433593492;TLX1..3_NFIC{dimer}:1.23608905276;FOXQ1:1.23574965802;TFAP2{A,C}:1.21720241122;PAX5:1.21490299821;CRX:1.20722992434;NRF1:1.16007553188;FOXM1:1.13814773191;BREu{core}:1.06143692819;STAT2,4,6:1.05474969005;ZNF384:1.04482526065;JUN:1.04303446169;T:1.03991791917;POU3F1..4:1.02265161237;VSX1,2:0.99267068055;GTF2A1,2:0.940916588042;IKZF2:0.920605209467;TOPORS:0.915580670136;FOX{F1,F2,J1}:0.910669292939;PAX4:0.897849676367;TLX2:0.800649640514;LEF1_TCF7_TCF7L1,2:0.796302431587;HOX{A4,D4}:0.794503201979;CDC5L:0.767666044623;MYOD1:0.750176074616;AHR_ARNT_ARNT2:0.743132535908;ZNF143:0.72817083699;MAFB:0.697402963726;FOX{I1,J2}:0.693999243684;IRF7:0.68636474047;ONECUT1,2:0.676424231095;ARID5B:0.655485612511;PDX1:0.610865307001;FOXA2:0.59443088257;NFIL3:0.56414788795;SPZ1:0.563637831886;GFI1:0.548731336322;HMX1:0.537795345359;NFY{A,B,C}:0.530025732621;ZBTB16:0.522389845184;RORA:0.519631782416;HOXA9_MEIS1:0.503325904017;XCPE1{core}:0.478668041201;HMGA1,2:0.477442373387;NFATC1..3:0.466418078041;FOXN1:0.454909392718;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.436702454999;HAND1,2:0.41800978792;TFCP2:0.407012120389;CREB1:0.401208649922;NKX2-3_NKX2-5:0.397940398845;TFDP1:0.384180146972;ADNP_IRX_SIX_ZHX:0.305666786568;NKX6-1,2:0.271491784627;IRF1,2:0.268385951912;PAX2:0.262413061103;ZEB1:0.230471617704;GZF1:0.166531722714;MEF2{A,B,C,D}:0.158493298725;PITX1..3:0.139719266783;ESRRA:0.0337341105176;IKZF1:0.0310698133129;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0229225658633;ATF5_CREB3:-0.0700498726834;LHX3,4:-0.0885970791624;ZNF238:-0.130710912295;ATF6:-0.138780268954;ALX1:-0.204358590275;ATF4:-0.231768436559;TFAP4:-0.245346455289;UFEwm:-0.287947911677;NR5A1,2:-0.292356858384;NFE2L2:-0.297280351723;PBX1:-0.302644486708;AIRE:-0.315336814483;SPI1:-0.320643664473;EVI1:-0.32706315803;SNAI1..3:-0.342636632586;TBP:-0.362198605016;NR6A1:-0.365946567502;ETS1,2:-0.37297203246;TEAD1:-0.404710787137;SPIB:-0.405401938354;HNF4A_NR2F1,2:-0.433012113464;NKX3-1:-0.435160446902;POU1F1:-0.444004854696;NR1H4:-0.459066647859;YY1:-0.467168369891;TP53:-0.48649427147;DMAP1_NCOR{1,2}_SMARC:-0.487969878719;ALX4:-0.541194848749;bHLH_family:-0.549179700996;TEF:-0.554068179455;CEBPA,B_DDIT3:-0.578238077955;NANOG{mouse}:-0.594666481535;GATA6:-0.618631607086;CDX1,2,4:-0.622680661561;NFE2:-0.627526839546;HNF1A:-0.691438309509;PAX8:-0.732883014008;RXR{A,B,G}:-0.842163261764;NFE2L1:-0.863446249334;FOXL1:-0.867813192388;NKX2-1,4:-0.893436374764;ELF1,2,4:-0.900293114999;PAX3,7:-0.921335681641;TBX4,5:-0.929472827882;TAL1_TCF{3,4,12}:-0.935527316007;HLF:-0.940424173307;SRF:-0.995372261166;NKX2-2,8:-1.00973512154;HIF1A:-1.01589202832;NFKB1_REL_RELA:-1.04993058292;E2F1..5:-1.07147417239;FOSL2:-1.09201967005;ELK1,4_GABP{A,B1}:-1.125987631;BACH2:-1.13460835531;ZNF148:-1.14237610639;RUNX1..3:-1.21527623942;FOS_FOS{B,L1}_JUN{B,D}:-1.23758033697;ESR1:-1.28709816006;GLI1..3:-1.35137271911;MYB:-1.37962858146;PAX1,9:-1.40533423911;POU2F1..3:-1.42244338203;RXRA_VDR{dimer}:-1.57482349057;HES1:-1.89183663049;PPARG:-2.0034618884;EN1,2:-2.08093201318;STAT5{A,B}:-2.13163487397;HOX{A5,B5}:-2.62189017899
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10155-103A2;search_select_hide=table117:FF:10155-103A2
 }}

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FF:10155-103A2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:23, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0