FF:10160-103A7: Difference between revisions

Latest revision as of 12:23, 3 June 2020

Name:	pineal gland, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12228
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	pineal gland
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005634

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12228		CAGE		DRX008707		DRR009579

Accession ID Hg19

Library id		BAM		CTSS
CNhs12228		DRZ001004		DRZ002389

Accession ID Hg38

Library id		BAM		CTSS
CNhs12228		DRZ012354		DRZ013739

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10031		download		download		download		download

RNA-Seq Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00005634
sRNA-Seq		SAMD00005634

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
RDhi10097		RNA-Seq		DRX057154		DRR062913
SRhi10006.ACTTGA		sRNA-Seq		DRX037340		DRR041706

Accession ID Hg19

Library id		BAM		CTSS
RDhi10097		DRZ007989
SRhi10006.ACTTGA		DRZ007348

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.481
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.294
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.223
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.126
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.126
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0.126
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.32
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.327
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.126
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.184
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.246
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	1.29
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.849
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.126
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.126
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	1.199
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.526
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0535
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0608
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.869
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.126
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.126
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.568
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.526
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.126
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.223
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.126
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.126
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.223
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0.805
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12228

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0339
MA0003.1	MA0003.1	0.28
MA0004.1	MA0004.1	0.341
MA0006.1	MA0006.1	0.255
MA0007.1	MA0007.1	0.207
MA0009.1	MA0009.1	0.243
MA0014.1	MA0014.1	0.707
MA0017.1	MA0017.1	0.00368
MA0018.2	MA0018.2	0.00267
MA0019.1	MA0019.1	0.718
MA0024.1	MA0024.1	0.96
MA0025.1	MA0025.1	0.495
MA0027.1	MA0027.1	0.891
MA0028.1	MA0028.1	0.885
MA0029.1	MA0029.1	0.517
MA0030.1	MA0030.1	0.223
MA0031.1	MA0031.1	0.574
MA0035.2	MA0035.2	0.155
MA0038.1	MA0038.1	0.052
MA0039.2	MA0039.2	0.26
MA0040.1	MA0040.1	0.45
MA0041.1	MA0041.1	0.583
MA0042.1	MA0042.1	0.827
MA0043.1	MA0043.1	0.38
MA0046.1	MA0046.1	0.0975
MA0047.2	MA0047.2	0.0451
MA0048.1	MA0048.1	0.158
MA0050.1	MA0050.1	0.0702
MA0051.1	MA0051.1	0.0397
MA0052.1	MA0052.1	0.169
MA0055.1	MA0055.1	0.0552
MA0057.1	MA0057.1	0.538
MA0058.1	MA0058.1	0.275
MA0059.1	MA0059.1	0.0243
MA0060.1	MA0060.1	0.0288
MA0061.1	MA0061.1	0.00884
MA0062.2	MA0062.2	0.244
MA0065.2	MA0065.2	0.00275
MA0066.1	MA0066.1	0.0944
MA0067.1	MA0067.1	0.42
MA0068.1	MA0068.1	0.157
MA0069.1	MA0069.1	0.773
MA0070.1	MA0070.1	0.968
MA0071.1	MA0071.1	0.49
MA0072.1	MA0072.1	0.106
MA0073.1	MA0073.1	0.502
MA0074.1	MA0074.1	0.336
MA0076.1	MA0076.1	0.587
MA0077.1	MA0077.1	0.756
MA0078.1	MA0078.1	0.724
MA0079.2	MA0079.2	0.941
MA0080.2	MA0080.2	2.82078e-8
MA0081.1	MA0081.1	0.0939
MA0083.1	MA0083.1	0.0085
MA0084.1	MA0084.1	0.849
MA0087.1	MA0087.1	0.704
MA0088.1	MA0088.1	0.512
MA0090.1	MA0090.1	0.161
MA0091.1	MA0091.1	0.395
MA0092.1	MA0092.1	0.195
MA0093.1	MA0093.1	0.372
MA0099.2	MA0099.2	6.1537e-14
MA0100.1	MA0100.1	0.626
MA0101.1	MA0101.1	0.00555
MA0102.2	MA0102.2	0.185
MA0103.1	MA0103.1	0.162
MA0104.2	MA0104.2	0.429
MA0105.1	MA0105.1	0.00232
MA0106.1	MA0106.1	0.0765
MA0107.1	MA0107.1	0.00531
MA0108.2	MA0108.2	0.214
MA0111.1	MA0111.1	0.79
MA0112.2	MA0112.2	0.00256
MA0113.1	MA0113.1	0.251
MA0114.1	MA0114.1	0.0164
MA0115.1	MA0115.1	0.924
MA0116.1	MA0116.1	0.0139
MA0117.1	MA0117.1	0.951
MA0119.1	MA0119.1	0.175
MA0122.1	MA0122.1	0.693
MA0124.1	MA0124.1	0.214
MA0125.1	MA0125.1	0.341
MA0131.1	MA0131.1	0.674
MA0135.1	MA0135.1	0.0153
MA0136.1	MA0136.1	3.35787e-8
MA0137.2	MA0137.2	0.743
MA0138.2	MA0138.2	0.708
MA0139.1	MA0139.1	0.619
MA0140.1	MA0140.1	0.145
MA0141.1	MA0141.1	0.019
MA0142.1	MA0142.1	0.898
MA0143.1	MA0143.1	0.814
MA0144.1	MA0144.1	0.0527
MA0145.1	MA0145.1	0.21
MA0146.1	MA0146.1	0.0292
MA0147.1	MA0147.1	0.224
MA0148.1	MA0148.1	0.033
MA0149.1	MA0149.1	0.0929
MA0150.1	MA0150.1	0.00149
MA0152.1	MA0152.1	0.894
MA0153.1	MA0153.1	0.347
MA0154.1	MA0154.1	0.0278
MA0155.1	MA0155.1	0.331
MA0156.1	MA0156.1	1.47004e-5
MA0157.1	MA0157.1	0.484
MA0159.1	MA0159.1	0.0325
MA0160.1	MA0160.1	0.0844
MA0162.1	MA0162.1	0.0494
MA0163.1	MA0163.1	6.35692e-5
MA0164.1	MA0164.1	0.308
MA0258.1	MA0258.1	0.0419
MA0259.1	MA0259.1	0.702

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12228

Novel motif	Logo	P-value
1	1	0.143
10	10	0.0538
100	100	0.212
101	101	0.766
102	102	0.95
103	103	0.0347
104	104	0.191
105	105	0.816
106	106	0.00426
107	107	0.00833
108	108	0.631
109	109	0.00785
11	11	0.028
110	110	0.0982
111	111	0.0415
112	112	0.791
113	113	0.437
114	114	0.308
115	115	0.654
116	116	0.292
117	117	0.031
118	118	0.0458
119	119	0.236
12	12	0.935
120	120	0.153
121	121	0.566
122	122	0.827
123	123	0.811
124	124	0.294
125	125	0.576
126	126	0.365
127	127	0.883
128	128	0.0795
129	129	0.352
13	13	0.0193
130	130	0.551
131	131	0.0668
132	132	0.506
133	133	0.0625
134	134	0.539
135	135	0.88
136	136	0.00727
137	137	0.833
138	138	0.332
139	139	0.55
14	14	0.752
140	140	0.116
141	141	0.504
142	142	0.68
143	143	0.133
144	144	0.571
145	145	0.0881
146	146	0.309
147	147	0.365
148	148	0.033
149	149	0.187
15	15	0.0338
150	150	0.192
151	151	0.462
152	152	0.0186
153	153	0.884
154	154	0.732
155	155	0.749
156	156	0.498
157	157	0.368
158	158	0.0159
159	159	0.0066
16	16	0.0526
160	160	0.0375
161	161	0.0753
162	162	0.497
163	163	0.593
164	164	0.0176
165	165	0.0505
166	166	0.819
167	167	0.412
168	168	0.588
169	169	0.019
17	17	0.0348
18	18	0.0952
19	19	0.224
2	2	0.716
20	20	0.264
21	21	0.186
22	22	0.254
23	23	0.202
24	24	0.158
25	25	0.398
26	26	4.92845e-4
27	27	0.604
28	28	0.812
29	29	0.0114
3	3	0.0927
30	30	0.807
31	31	0.867
32	32	0.0067
33	33	0.076
34	34	0.64
35	35	0.807
36	36	0.164
37	37	0.083
38	38	0.332
39	39	0.173
4	4	0.996
40	40	0.0253
41	41	0.153
42	42	0.461
43	43	0.117
44	44	0.136
45	45	0.714
46	46	0.0492
47	47	0.183
48	48	0.136
49	49	0.227
5	5	0.37
50	50	0.3
51	51	0.302
52	52	0.277
53	53	0.855
54	54	0.36
55	55	0.789
56	56	0.487
57	57	0.179
58	58	0.376
59	59	0.0546
6	6	0.686
60	60	0.0538
61	61	0.0605
62	62	0.377
63	63	0.0564
64	64	0.414
65	65	0.12
66	66	0.218
67	67	0.36
68	68	0.12
69	69	0.0411
7	7	0.168
70	70	0.00411
71	71	0.0118
72	72	0.655
73	73	0.0244
74	74	0.767
75	75	0.0639
76	76	0.282
77	77	0.159
78	78	0.0745
79	79	0.365
8	8	0.00915
80	80	0.843
81	81	0.256
82	82	0.648
83	83	0.17
84	84	0.415
85	85	0.0853
86	86	0.5
87	87	8.57144e-5
88	88	0.917
89	89	0.151
9	9	0.632
90	90	0.241
91	91	0.575
92	92	0.301
93	93	0.911
94	94	0.0702
95	95	0.015
96	96	0.767
97	97	0.698
98	98	0.205
99	99	0.477

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12228

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010160 human pineal gland - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001905 (pineal body)
0001894 (diencephalon)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0003296 (gland of diencephalon)
0010133 (neuroendocrine gland)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002784 (regional part of diencephalon)
0002757 (regional part of epithalamus)
0010134 (secretory circumventricular organ)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005408 (circumventricular organ)
0001017 (central nervous system)
0001016 (nervous system)
0001890 (forebrain)
0000949 (endocrine system)
0001899 (epithalamus)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010160 (human pineal gland - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10160-103A7
+|DRA_sample_Accession=CAGE@SAMD00005634
-|name=pineal gland, adult, donor10252
+|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005634!sRNA-Seq@SAMD00005634
-|sample_id=10160
+|HumanCAGEScanFiles=NCig10031;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pineal%2520gland%252c%2520adult%252c%2520donor10252.NCig10031.10160-103A7.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pineal%2520gland%252c%2520adult%252c%2520donor10252.NCig10031.10160-103A7.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pineal%2520gland%252c%2520adult%252c%2520donor10252.NCig10031.10160-103A7.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pineal%2520gland%252c%2520adult%252c%2520donor10252.NCig10031.10160-103A7.hg19.GCTATA.pairs.bed.gz
-|rna_tube_id=103A7
+|accession_numbers=CAGE;DRX008707;DRR009579;DRZ001004;DRZ002389;DRZ012354;DRZ013739
-|rna_box=103
+|accession_numbers_RNASeq=RNA-Seq;DRX057154;DRR062913;DRZ007989!sRNA-Seq;DRX037340;DRR041706;DRZ007348
-|rna_position=A7
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001905,UBERON:0001894,UBERON:0000479,UBERON:0004121,UBERON:0003296,UBERON:0010133,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0002616,UBERON:0002780,UBERON:0002784,UBERON:0002757,UBERON:0010134,UBERON:0002530,UBERON:0010317,UBERON:0005408,UBERON:0001017,UBERON:0001016,UBERON:0001890,UBERON:0000949,UBERON:0001899
-|sample_cell_lot=NA
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
-|sample_cell_catalog=NA
-|sample_company=
-|rna_lot_number=
-|rna_catalog_number=
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=
-|sample_tissue=pineal gland
-|sample_donor(cell lot)=donor: 10252
-|sample_sex=female
-|sample_age=76
-|sample_ethnicity=
-|rna_rin=
-|rna_od260/230=2.21
-|rna_od260/280=2.05
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=Peter Heutink
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
-|rna_weight_ug=57.168
-|rna_concentration=0.76224
-|sample_note=
-|profile_hcage=CNhs12228,LSID852,release009,COMPLETED
-|profile_cagescan=NCig10031,,,
-|profile_srnaseq=SRhi10006,,,
-|profile_rnaseq=,,,
-|ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000949,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001890,UBERON:0001894,UBERON:0001899,UBERON:0001905,UBERON:0002050,UBERON:0002346,UBERON:0002368,UBERON:0002530,UBERON:0002532,UBERON:0002616,UBERON:0002757,UBERON:0002780,UBERON:0002784,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0003296,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005408,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010160
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
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r3:128206762..128206781,-!p2@GATA2!1.24!100.55!GATA2;;chr3:18466787..18466839,-!p1@SATB1!1.23!69.95!SATB1;;chr1:61547894..61547968,+!p2@NFIA!1.23!46.41!NFIA;;chr15:61521417..61521460,-!p2@RORA!1.23!35.31!RORA;;chr7:74072135..74072171,+!p2@GTF2I!1.22!48.09!GTF2I;;chr8:93107451..93107468,-!p2@RUNX1T1!1.22!15.47!RUNX1T1;;chr5:88179017..88179046,-!p2@MEF2C!1.21!60.53!MEF2C;;chr2:145277882..145277967,-!p3@ZEB2!1.21!25.89!ZEB2;;chr10:35484053..35484076,+!p1@CREM!1.20!36.65!CREM;;chr19:46801639..46801699,+!p1@HIF3A!1.20!14.80!HIF3A;;chr1:61548225..61548299,+!p1@NFIA!1.19!184.96!NFIA;;chr2:214016314..214016343,-!p2@IKZF2!1.19!24.21!IKZF2;;chr12:26277929..26277955,-!p3@BHLHE41!1.19!20.51!BHLHE41;;chr3:114173859..114173873,-!p15@ZBTB20!1.19!14.46!ZBTB20;;chr17:36861496..36861586,+!p1@MLLT6!1.17!133.50!MLLT6;;chr14:21994449..21994524,-!p2@SALL2!1.17!41.36!SALL2;;chr11:31832658..31832681,-!p1@PAX6!1.17!13.79!PAX6;;chr16:51185544..51185555,-!p7@SALL1!1.17!13.79!SALL1;;chr15:61521462..61521482,-!p4@RORA!1.16!13.45!RORA;;chr8:53162019..53162028,-!p12@ST18!1.16!13.45!ST18;;chr1:10856694..10856715,-!p3@CASZ1!1.16!13.45!CASZ1;;chr3:147127177..147127194,+!p2@ZIC1!1.16!13.45!ZIC1;;chr10:111987079..111987115,+!p3@MXI1!1.15!18.16!MXI1;;chr12:54785054..54785072,-!p4@ZNF385A!1.15!14.80!ZNF385A;;chr20:62796052..62796067,+!p5@MYT1!1.15!13.12!MYT1;;chr9:139096968..139096979,-!p2@LHX3!1.15!13.12!LHX3;;chr6:15246200..15246214,+!p2@JARID2!1.14!34.97!JARID2;;chr2:16080659..16080685,+!p1@MYCN!1.14!12.78!MYCN;;chr16:51185511..51185522,-!p9@SALL1!1.14!12.78!SALL1;;chr14:58798013..58798071,+!p2@ARID4A!1.14!12.78!ARID4A;;chr9:3525867..3525902,-!p3@RFX3!1.13!42.71!RFX3;;chr15:57511609..57511651,+!p2@TCF12!1.13!20.85!TCF12;;chr11:8040739..8040815,+!p4@TUB!1.13!12.44!TUB;;chr12:106976678..106976708,+!p2@RFX4!1.13!12.44!RFX4;;chr3:114477934..114477961,-!p14@ZBTB20!1.13!12.44!ZBTB20;;chr9:139095030..139095040,-!p4@LHX3!1.13!12.44!LHX3;;chr2:178128250..178128293,-!p6@NFE2L2!1.12!30.60!NFE2L2;;chr20:45142154..45142227,-!p1@ZNF334!1.12!24.55!ZNF334;;chr19:37998036..37998098,+!p2@ZNF793!1.12!15.13!ZNF793;;chr14:21562671..21562702,-!p8@ZNF219!1.12!12.11!ZNF219;;chr8:77593474..77593612,+!p1@ZFHX4!1.11!50.44!ZFHX4;;chr2:74229812..74229867,+!p1@TET3!1.11!29.93!TET3;;chr5:178368186..178368238,+!p1@ZNF454!1.11!21.52!ZNF454;;chr19:38042240..38042309,+!p2@ZNF540!1.09!17.15!ZNF540;;chr15:61521495..61521506,-!p5@RORA!1.08!11.10!RORA;;chr7:39125511..39125560,+!p1@POU6F2!1.08!11.10!POU6F2;;chr12:24102576..24102623,-!p2@SOX5!1.08!11.10!SOX5;;chr19:40562072..40562143,-!p1@ZNF780B!1.07!98.19!ZNF780B;;chr9:3525968..3526016,-!p1@RFX3!1.07!62.89!RFX3;;chr15:80696703..80696754,+!p1@ARNT2!1.07!14.46!ARNT2;;chr1:61548118..61548129,+!p9@NFIA!1.07!12.11!NFIA;;chr3:114819101..114819121,-!p7@ZBTB20!1.07!10.76!ZBTB20;;chr3:52001426..52001447,-!p3@PCBP4!1.06!29.59!PCBP4;;chr19:52391147..52391218,-!p1@ZNF577!1.05!32.28!ZNF577;;chr9:2015275..2015287,+!p8@SMARCA2!1.05!16.48!SMARCA2;;chr7:74072175..74072188,+!p6@GTF2I!1.05!14.12!GTF2I;;chrX:101186981..101187030,-!p1@ZMAT1!1.04!33.29!ZMAT1;;chr11:63684602..63684664,-!p1@RCOR2!1.04!19.84!RCOR2;;chr11:47400078..47400106,-!p1@SPI1!1.04!10.09!SPI1;;chr14:21562648..21562658,-!p22@ZNF219!1.04!10.09!ZNF219;;chr16:51185149..51185160,-!p5@SALL1!1.04!10.09!SALL1;;chr17:37764128..37764258,-!p1@NEUROD2!1.04!10.09!NEUROD2;;chr3:114866084..114866118,-!p2@ZBTB20!1.03!35.98!ZBTB20;;chr1:8877735..8877760,-!p8@RERE!1.03!26.23!RERE;;chr1:164528687..164528711,+!p6@PBX1!1.03!11.43!PBX1;;chrX:118739835..118739862,-!p1@NKRF!1.03!10.76!NKRF;;chr9:77230443..77230455,+!p6@RORB!1.03!9.75!RORB;;chr19:46800289..46800327,+!p2@HIF3A!1.03!9.75!HIF3A;;chr1:165414259..165414273,-!p6@RXRG!1.03!9.75!RXRG;;chr4:149363662..149363688,-!p6@NR3C2!1.03!9.75!NR3C2;;chr2:178128199..178128245,-!p3@NFE2L2!1.02!51.45!NFE2L2;;chr19:38183208..38183225,-!p1@ZNF781!1.02!12.11!ZNF781;;chr8:93115584..93115642,-!p5@RUNX1T1!1.02!9.42!RUNX1T1;;chr18:52989031..52989079,-!p2@TCF4!1.01!22.19!TCF4;;chr14:75894391..75894435,+!p2@JDP2!1.01!10.76!JDP2;;chr17:40897043..40897087,-!p1@EZH1!1.00!81.04!EZH1;;chr19:37096139..37096170,-!p2@ZNF529!1.00!25.56!ZNF529;;chr3:44626446..44626477,+!p1@ZNF660!1.00!16.48!ZNF660;;chr17:38465413..38465438,+!p5@RARA!1.00!14.46!RARA;;chr16:67197654..67197716,+!p3@HSF4!1.00!9.08!HSF4;;chr2:182545296..182545307,-!p3@NEUROD1!1.00!9.08!NEUROD1;;chr2:214016254..214016282,-!p7@IKZF2!1.00!9.08!IKZF2;;chr3:187463179..187463201,-!p2@BCL6!0.99!36.65!BCL6;;chr17:36861675..36861697,+!p3@MLLT6!0.99!20.85!MLLT6;;chr10:70320074..70320106,+!p1@TET1!0.99!17.82!TET1;;chr3:42947600..42947680,+!p1@ZNF662!0.99!12.78!ZNF662;;chr3:114819047..114819069,-!p16@ZBTB20!0.99!8.74!ZBTB20;;chrX:118739782..118739829,-!p2@NKRF!0.99!8.74!NKRF;;chr1:216896801..216896812,-!p5@ESRRG!0.99!8.74!ESRRG;;chr1:217262969..217262995,-!p7@ESRRG!0.99!8.74!ESRRG;;chr19:49140609..49140643,-!p1@DBP!0.98!49.43!DBP;;chr4:146859927..146860055,-!p1@ZNF827!0.97!51.45!ZNF827;;chr19:37096194..37096235,+!p1@ZNF382!0.97!27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+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 44: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
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+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pineal%2520gland%252c%2520adult%252c%2520donor10252.CNhs12228.10160-103A7.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pineal%2520gland%252c%2520adult%252c%2520donor10252.CNhs12228.10160-103A7.hg19.nobarcode.rdna.fa.gz
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+|id=FF:10160-103A7
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+|is_obsolete=
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+|microRNAs_nn=
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+|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10006.ACTTGA.10160
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+|name=pineal gland, adult, donor10252
+|namespace=FANTOM5
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+|rna_od260/280=2.05
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+|rnaseq_library_id=RDhi10097!SRhi10006.ACTTGA
+|sample_age=76
+|sample_category=tissues
+|sample_cell_catalog=NA
+|sample_cell_line=
+|sample_cell_lot=NA
+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=Peter Heutink
+|sample_company=
+|sample_description=
+|sample_dev_stage=
+|sample_disease=
+|sample_donor(cell lot)=donor: 10252
+|sample_ethnicity=
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complex;6.30627745010874e-45!GO:0043233;organelle lumen;6.36955999985975e-45!GO:0031974;membrane-enclosed lumen;6.36955999985975e-45!GO:0016043;cellular component organization and biogenesis;9.83020903045002e-41!GO:0033036;macromolecule localization;2.29164341348935e-37!GO:0015031;protein transport;1.04583627909744e-36!GO:0005739;mitochondrion;1.78625856958276e-36!GO:0016071;mRNA metabolic process;2.66865094189294e-35!GO:0043283;biopolymer metabolic process;2.12040628632476e-34!GO:0006396;RNA processing;3.08540845465251e-34!GO:0043234;protein complex;8.79562693159451e-34!GO:0045184;establishment of protein localization;1.34280153349748e-33!GO:0008104;protein localization;2.74296461387645e-33!GO:0010467;gene expression;4.92827255438133e-33!GO:0008380;RNA splicing;3.6874381150697e-31!GO:0031981;nuclear lumen;4.55252696040549e-31!GO:0031090;organelle membrane;5.61140383025131e-31!GO:0006397;mRNA processing;3.1166986100376e-29!GO:0046907;intracellular transport;9.15503899701703e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.14371882820312e-26!GO:0031967;organelle envelope;2.14532563126497e-25!GO:0044429;mitochondrial part;2.88009950049844e-25!GO:0019538;protein metabolic process;3.10088091472556e-25!GO:0031975;envelope;3.19497665671195e-25!GO:0006886;intracellular protein transport;1.10758611017413e-24!GO:0051649;establishment of cellular localization;1.86572510362233e-24!GO:0051641;cellular localization;2.78864077489332e-23!GO:0005829;cytosol;9.838903640577e-23!GO:0005654;nucleoplasm;1.67642566674128e-22!GO:0044260;cellular macromolecule metabolic process;2.57393922243264e-21!GO:0016192;vesicle-mediated transport;3.40056206372589e-21!GO:0044267;cellular protein metabolic process;4.1809127119897e-21!GO:0016070;RNA metabolic process;1.1379425840028e-20!GO:0005681;spliceosome;2.90143004323746e-20!GO:0044451;nucleoplasm part;3.5616925411695e-20!GO:0006512;ubiquitin cycle;4.2059580066114e-20!GO:0005840;ribosome;4.97963226505323e-20!GO:0006119;oxidative phosphorylation;4.80877650703065e-19!GO:0065003;macromolecular complex assembly;4.77493488200488e-18!GO:0006412;translation;4.99226012451122e-18!GO:0003676;nucleic acid binding;1.62339078584876e-17!GO:0005740;mitochondrial envelope;1.67585484797142e-17!GO:0031966;mitochondrial membrane;2.22655151112795e-17!GO:0006996;organelle organization and biogenesis;4.56305318192858e-17!GO:0006457;protein folding;2.14226282602426e-16!GO:0016874;ligase activity;3.54319161393518e-16!GO:0019866;organelle inner membrane;4.20224621502288e-16!GO:0022607;cellular component assembly;4.46349945940365e-16!GO:0000166;nucleotide binding;7.43419923246885e-16!GO:0005743;mitochondrial inner membrane;2.69717712084879e-15!GO:0003735;structural constituent of ribosome;3.03853116637546e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.03481464102883e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.39993896550197e-14!GO:0019941;modification-dependent protein catabolic process;2.08032062716449e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.08032062716449e-14!GO:0008134;transcription factor binding;2.09842481562402e-14!GO:0005794;Golgi apparatus;2.38135330989395e-14!GO:0044265;cellular macromolecule catabolic process;2.89237841937893e-14!GO:0044257;cellular protein catabolic process;2.98925113198061e-14!GO:0044455;mitochondrial membrane part;1.91278437282853e-13!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.98039701996991e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;2.17488102427216e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.35767994258027e-13!GO:0016462;pyrophosphatase activity;2.54824512785951e-13!GO:0016604;nuclear body;3.18993438780639e-13!GO:0017111;nucleoside-triphosphatase activity;5.42488413435178e-13!GO:0048770;pigment granule;6.21889686835553e-13!GO:0042470;melanosome;6.21889686835553e-13!GO:0033279;ribosomal subunit;7.10644018074316e-13!GO:0043412;biopolymer modification;1.50339430286924e-12!GO:0005746;mitochondrial respiratory chain;1.59525415368373e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.10974302599738e-12!GO:0050136;NADH dehydrogenase (quinone) activity;2.17775645988788e-12!GO:0003954;NADH dehydrogenase activity;2.17775645988788e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.17775645988788e-12!GO:0051082;unfolded protein binding;2.90792397253692e-12!GO:0016607;nuclear speck;3.45059733198557e-12!GO:0009058;biosynthetic process;4.70896240612026e-12!GO:0009059;macromolecule biosynthetic process;8.99787341200135e-12!GO:0044249;cellular biosynthetic process;1.01488612149332e-11!GO:0012505;endomembrane system;1.43453661051273e-11!GO:0048193;Golgi vesicle transport;1.97457513322458e-11!GO:0043687;post-translational protein modification;2.75153414788602e-11!GO:0006464;protein modification process;3.72894128548541e-11!GO:0022618;protein-RNA complex assembly;3.92679710468147e-11!GO:0043228;non-membrane-bound organelle;7.97027665735065e-11!GO:0043232;intracellular non-membrane-bound organelle;7.97027665735065e-11!GO:0042775;organelle ATP synthesis coupled electron transport;8.50779085824244e-11!GO:0042773;ATP synthesis coupled electron transport;8.50779085824244e-11!GO:0006605;protein targeting;9.16682778990951e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.23691410685908e-10!GO:0045271;respiratory chain complex I;1.23691410685908e-10!GO:0005747;mitochondrial respiratory chain complex I;1.23691410685908e-10!GO:0008639;small protein conjugating enzyme activity;1.66642612902142e-10!GO:0004842;ubiquitin-protein ligase activity;1.94553151824715e-10!GO:0044445;cytosolic part;2.20963520902108e-10!GO:0043285;biopolymer catabolic process;2.30584884114875e-10!GO:0032553;ribonucleotide binding;2.30584884114875e-10!GO:0032555;purine ribonucleotide binding;2.30584884114875e-10!GO:0031982;vesicle;2.4219764869168e-10!GO:0008135;translation factor activity, nucleic acid binding;2.50258500458371e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.56417946681946e-10!GO:0008565;protein transporter activity;5.46712504248779e-10!GO:0031410;cytoplasmic vesicle;6.4143479580802e-10!GO:0017076;purine nucleotide binding;1.10129773433109e-09!GO:0030163;protein catabolic process;1.18790208765143e-09!GO:0003712;transcription cofactor activity;1.38494382915147e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.41859369698276e-09!GO:0000375;RNA splicing, via transesterification reactions;1.41859369698276e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.41859369698276e-09!GO:0031980;mitochondrial lumen;1.44107432977113e-09!GO:0005759;mitochondrial matrix;1.44107432977113e-09!GO:0019787;small conjugating protein ligase activity;1.47351546783853e-09!GO:0006259;DNA metabolic process;1.52335270220129e-09!GO:0031988;membrane-bound vesicle;1.93526598390066e-09!GO:0009057;macromolecule catabolic process;2.27709110882252e-09!GO:0044248;cellular catabolic process;2.28655404217014e-09!GO:0006913;nucleocytoplasmic transport;2.59749512961042e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.93644872824763e-09!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.53613469761019e-09!GO:0016023;cytoplasmic membrane-bound vesicle;4.80164130526777e-09!GO:0045045;secretory pathway;5.31028256414049e-09!GO:0051169;nuclear transport;5.87733011343083e-09!GO:0000502;proteasome complex (sensu Eukaryota);6.97140717559346e-09!GO:0050794;regulation of cellular process;7.01470703188171e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.44752775047204e-09!GO:0031965;nuclear membrane;1.18532472579174e-08!GO:0019829;cation-transporting ATPase activity;1.24018465887289e-08!GO:0005635;nuclear envelope;1.56031302432237e-08!GO:0005783;endoplasmic reticulum;1.86182546942835e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.52131676749031e-08!GO:0016568;chromatin modification;2.52378331560292e-08!GO:0016881;acid-amino acid ligase activity;2.81891517757108e-08!GO:0005730;nucleolus;3.36875121768456e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.19097040524044e-08!GO:0016887;ATPase activity;6.5965980155656e-08!GO:0050789;regulation of biological process;7.44510540421594e-08!GO:0015935;small ribosomal subunit;1.00458915005384e-07!GO:0032559;adenyl ribonucleotide binding;1.01007216953425e-07!GO:0006446;regulation of translational initiation;1.06295534877223e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.19227161221348e-07!GO:0015986;ATP synthesis coupled proton transport;1.66242831330198e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.66242831330198e-07!GO:0048475;coated membrane;2.22136842440116e-07!GO:0030117;membrane coat;2.22136842440116e-07!GO:0051186;cofactor metabolic process;2.35583716351142e-07!GO:0042623;ATPase activity, coupled;2.64833012291166e-07!GO:0005524;ATP binding;2.80897879199919e-07!GO:0050657;nucleic acid transport;3.11022498753819e-07!GO:0051236;establishment of RNA localization;3.11022498753819e-07!GO:0050658;RNA transport;3.11022498753819e-07!GO:0006461;protein complex assembly;3.33324587831518e-07!GO:0006403;RNA localization;3.43464349010442e-07!GO:0005768;endosome;4.07384471487331e-07!GO:0030554;adenyl nucleotide binding;5.18414166114998e-07!GO:0006323;DNA packaging;5.21253730894985e-07!GO:0006413;translational initiation;7.6276837926427e-07!GO:0003743;translation initiation factor activity;9.26536562160582e-07!GO:0004386;helicase activity;1.080612162311e-06!GO:0048471;perinuclear region of cytoplasm;1.17975564891652e-06!GO:0032940;secretion by cell;1.71185441456178e-06!GO:0006163;purine nucleotide metabolic process;1.81611395721553e-06!GO:0044453;nuclear membrane part;1.86346442426606e-06!GO:0006366;transcription from RNA polymerase II promoter;1.86346442426606e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.09391093052928e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.09391093052928e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.1604172878934e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.1604172878934e-06!GO:0005643;nuclear pore;2.35309972488128e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.4658139923978e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.57380769228957e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.65102061301277e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.65102061301277e-06!GO:0019222;regulation of metabolic process;2.83208444727387e-06!GO:0009141;nucleoside triphosphate metabolic process;3.16269131817496e-06!GO:0009150;purine ribonucleotide metabolic process;3.40669304512449e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.49670453839036e-06!GO:0006793;phosphorus metabolic process;3.77610766594195e-06!GO:0006796;phosphate metabolic process;3.77610766594195e-06!GO:0009055;electron carrier activity;4.01110078154374e-06!GO:0006164;purine nucleotide biosynthetic process;4.5919858435494e-06!GO:0000151;ubiquitin ligase complex;4.94321609410706e-06!GO:0006754;ATP biosynthetic process;5.02287046169683e-06!GO:0006753;nucleoside phosphate metabolic process;5.02287046169683e-06!GO:0017038;protein import;5.03988902232578e-06!GO:0009259;ribonucleotide metabolic process;5.15048668711391e-06!GO:0006732;coenzyme metabolic process;5.74135657955935e-06!GO:0005761;mitochondrial ribosome;5.74135657955935e-06!GO:0000313;organellar ribosome;5.74135657955935e-06!GO:0044440;endosomal part;5.79175904999507e-06!GO:0010008;endosome membrane;5.79175904999507e-06!GO:0046034;ATP metabolic process;6.23799976194449e-06!GO:0051028;mRNA transport;6.5560159798062e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.55898794972885e-06!GO:0032446;protein modification by small protein conjugation;6.60977969868852e-06!GO:0015934;large ribosomal subunit;6.78554542719992e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.77486813166612e-06!GO:0009152;purine ribonucleotide biosynthetic process;8.48406721840635e-06!GO:0016564;transcription repressor activity;9.21103745080309e-06!GO:0048523;negative regulation of cellular process;9.30373866288219e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.05917281481585e-05!GO:0044431;Golgi apparatus part;1.23370123670075e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.32469113463111e-05!GO:0003713;transcription coactivator activity;1.55388692583289e-05!GO:0044432;endoplasmic reticulum part;1.57584586769256e-05!GO:0005083;small GTPase regulator activity;1.69237721243951e-05!GO:0016567;protein ubiquitination;1.74458098275413e-05!GO:0008026;ATP-dependent helicase activity;2.05302288908851e-05!GO:0051276;chromosome organization and biogenesis;2.08465718222952e-05!GO:0008047;enzyme activator activity;2.09418716218188e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.12281248793418e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.23706866017153e-05!GO:0015630;microtubule cytoskeleton;2.71377029939319e-05!GO:0016044;membrane organization and biogenesis;3.1017098726524e-05!GO:0006350;transcription;3.14463283254361e-05!GO:0043566;structure-specific DNA binding;3.2705979933674e-05!GO:0031252;leading edge;3.2705979933674e-05!GO:0000245;spliceosome assembly;3.28875971704425e-05!GO:0030695;GTPase regulator activity;3.41983776193345e-05!GO:0009260;ribonucleotide biosynthetic process;3.46916775569186e-05!GO:0045333;cellular respiration;3.88109506668366e-05!GO:0003924;GTPase activity;3.93098576984635e-05!GO:0009060;aerobic respiration;3.93098576984635e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.93098576984635e-05!GO:0006613;cotranslational protein targeting to membrane;4.30215769058231e-05!GO:0030036;actin cytoskeleton organization and biogenesis;4.55475864996471e-05!GO:0008287;protein serine/threonine phosphatase complex;5.13879844486011e-05!GO:0008270;zinc ion binding;5.25196657982735e-05!GO:0005770;late endosome;5.2827770513566e-05!GO:0031072;heat shock protein binding;5.7144899822886e-05!GO:0005793;ER-Golgi intermediate compartment;5.83603832286951e-05!GO:0019899;enzyme binding;6.77118921406053e-05!GO:0015631;tubulin binding;6.80551704766259e-05!GO:0009056;catabolic process;6.8499502713433e-05!GO:0006974;response to DNA damage stimulus;6.87529710891174e-05!GO:0045259;proton-transporting ATP synthase complex;7.12004369910217e-05!GO:0008092;cytoskeletal protein binding;8.44427928311435e-05!GO:0030120;vesicle coat;9.06088955098426e-05!GO:0030662;coated vesicle membrane;9.06088955098426e-05!GO:0051188;cofactor biosynthetic process;9.35974550270172e-05!GO:0005773;vacuole;0.000100851285940115!GO:0006606;protein import into nucleus;0.000113402746206499!GO:0065007;biological regulation;0.000113588554921482!GO:0005798;Golgi-associated vesicle;0.000117617445546678!GO:0031323;regulation of cellular metabolic process;0.000143455963225971!GO:0010468;regulation of gene expression;0.000148052497164138!GO:0051170;nuclear import;0.000151840506175906!GO:0051168;nuclear export;0.000172270922345425!GO:0003714;transcription corepressor activity;0.000176484996103109!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.000179850065217351!GO:0046930;pore complex;0.000183170634688503!GO:0003724;RNA helicase activity;0.000216386514273646!GO:0048519;negative regulation of biological process;0.000221688778313236!GO:0019904;protein domain specific binding;0.000225657685557396!GO:0030135;coated vesicle;0.00022865558530059!GO:0009108;coenzyme biosynthetic process;0.000255948599473156!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000262442065529758!GO:0004812;aminoacyl-tRNA ligase activity;0.000262442065529758!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000262442065529758!GO:0007264;small GTPase mediated signal transduction;0.000264128326538495!GO:0030029;actin filament-based process;0.000264128326538495!GO:0032774;RNA biosynthetic process;0.000275232435654095!GO:0005791;rough endoplasmic reticulum;0.000282204962243863!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000287870728138626!GO:0006351;transcription, DNA-dependent;0.000287870728138626!GO:0005769;early endosome;0.000293130636935969!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000313976450091628!GO:0015399;primary active transmembrane transporter activity;0.000313976450091628!GO:0003697;single-stranded DNA binding;0.000333062746488304!GO:0016481;negative regulation of transcription;0.00033628356187026!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000342474583416205!GO:0006897;endocytosis;0.000369730942893723!GO:0010324;membrane invagination;0.000369730942893723!GO:0016310;phosphorylation;0.000403040893701706!GO:0005667;transcription factor complex;0.000436347180994161!GO:0065002;intracellular protein transport across a membrane;0.000466210679514551!GO:0006281;DNA repair;0.000485195415583469!GO:0006612;protein targeting to membrane;0.000497569173917246!GO:0043038;amino acid activation;0.000541085125704696!GO:0006418;tRNA aminoacylation for protein translation;0.000541085125704696!GO:0043039;tRNA aminoacylation;0.000541085125704696!GO:0000139;Golgi membrane;0.00054463085548131!GO:0005789;endoplasmic reticulum membrane;0.000569305308213288!GO:0006099;tricarboxylic acid cycle;0.000601018335314978!GO:0046356;acetyl-CoA catabolic process;0.000601018335314978!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000647175092347068!GO:0043492;ATPase activity, coupled to movement of substances;0.000654104548714965!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000718608872455343!GO:0007010;cytoskeleton organization and biogenesis;0.000757724147859265!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000772546133658739!GO:0030118;clathrin coat;0.000772546133658739!GO:0045786;negative regulation of progression through cell cycle;0.000796098728403616!GO:0008654;phospholipid biosynthetic process;0.000891636547029521!GO:0030532;small nuclear ribonucleoprotein complex;0.00095942683886413!GO:0051087;chaperone binding;0.000962385587654101!GO:0031324;negative regulation of cellular metabolic process;0.00101333613487364!GO:0006084;acetyl-CoA metabolic process;0.00102436705637449!GO:0003690;double-stranded DNA binding;0.00107805344378581!GO:0045449;regulation of transcription;0.00107805344378581!GO:0006752;group transfer coenzyme metabolic process;0.00108941981776941!GO:0006607;NLS-bearing substrate import into nucleus;0.00119041990643622!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00119695505594825!GO:0000323;lytic vacuole;0.00122199860572545!GO:0005764;lysosome;0.00122199860572545!GO:0009892;negative regulation of metabolic process;0.00123686591474644!GO:0004722;protein serine/threonine phosphatase activity;0.00127551407915855!GO:0006402;mRNA catabolic process;0.00136169885453961!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00137371216194887!GO:0005813;centrosome;0.00137555399392635!GO:0030133;transport vesicle;0.00140505573200693!GO:0008017;microtubule binding;0.0014569213735108!GO:0016363;nuclear matrix;0.00147706175774215!GO:0006355;regulation of transcription, DNA-dependent;0.00153027329830149!GO:0005096;GTPase activator activity;0.00167123376383627!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00182816812602295!GO:0030384;phosphoinositide metabolic process;0.00184588790523894!GO:0022890;inorganic cation transmembrane transporter activity;0.00191666184869182!GO:0046914;transition metal ion binding;0.00195206483633776!GO:0016791;phosphoric monoester hydrolase activity;0.00201101444490331!GO:0004721;phosphoprotein phosphatase activity;0.00204049835260529!GO:0006891;intra-Golgi vesicle-mediated transport;0.00206497490322189!GO:0005223;intracellular cGMP activated cation channel activity;0.00211558149335093!GO:0048500;signal recognition particle;0.00219183838032509!GO:0051427;hormone receptor binding;0.00225872702254472!GO:0006399;tRNA metabolic process;0.00228044265934703!GO:0005839;proteasome core complex (sensu Eukaryota);0.0023906555549341!GO:0030426;growth cone;0.00243179471217544!GO:0007265;Ras protein signal transduction;0.00251609963481046!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00260629511512026!GO:0030867;rough endoplasmic reticulum membrane;0.00260629511512026!GO:0019867;outer membrane;0.00262261710113001!GO:0031124;mRNA 3'-end processing;0.00263243580389676!GO:0043623;cellular protein complex assembly;0.00264443023746711!GO:0032561;guanyl ribonucleotide binding;0.00268382629093639!GO:0019001;guanyl nucleotide binding;0.00268382629093639!GO:0019783;small conjugating protein-specific protease activity;0.00287670241527185!GO:0030427;site of polarized growth;0.00291067926564142!GO:0009109;coenzyme catabolic process;0.00306040821338907!GO:0042254;ribosome biogenesis and assembly;0.00307491249687933!GO:0008022;protein C-terminus binding;0.00308099662652126!GO:0005048;signal sequence binding;0.00312663303956365!GO:0005741;mitochondrial outer membrane;0.00313841138500732!GO:0006650;glycerophospholipid metabolic process;0.00318217065683353!GO:0048489;synaptic vesicle transport;0.00326485390536121!GO:0016311;dephosphorylation;0.0032915282592404!GO:0005815;microtubule organizing center;0.00339388772682048!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00341373997505123!GO:0016563;transcription activator activity;0.00343222898367768!GO:0019717;synaptosome;0.00344592162947927!GO:0004843;ubiquitin-specific protease activity;0.00352199151354726!GO:0012501;programmed cell death;0.00368792594656589!GO:0035257;nuclear hormone receptor binding;0.00371535237737689!GO:0006333;chromatin assembly or disassembly;0.00399205456503617!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00406103085199697!GO:0004221;ubiquitin thiolesterase activity;0.00414426104011834!GO:0006915;apoptosis;0.00419276946195351!GO:0005525;GTP binding;0.0042536527909578!GO:0008250;oligosaccharyl transferase complex;0.00438321204659481!GO:0022406;membrane docking;0.00454183364919436!GO:0048278;vesicle docking;0.00454183364919436!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00473066912385767!GO:0008219;cell death;0.00476832747317123!GO:0016265;death;0.00476832747317123!GO:0051056;regulation of small GTPase mediated signal transduction;0.00490288945160222!GO:0031968;organelle outer membrane;0.00495944905553286!GO:0005874;microtubule;0.00497280356390656!GO:0003729;mRNA binding;0.00507972050299857!GO:0008186;RNA-dependent ATPase activity;0.00513484734891346!GO:0030137;COPI-coated vesicle;0.00514856586950198!GO:0007049;cell cycle;0.00530880284636324!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00531082081034737!GO:0051789;response to protein stimulus;0.00531082081034737!GO:0006986;response to unfolded protein;0.00531082081034737!GO:0000159;protein phosphatase type 2A complex;0.00540383729280743!GO:0051246;regulation of protein metabolic process;0.00543108650660878!GO:0008139;nuclear localization sequence binding;0.00544818733752382!GO:0051726;regulation of cell cycle;0.00555434927300844!GO:0004298;threonine endopeptidase activity;0.00578378029175902!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00578675841149303!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00578675841149303!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00578675841149303!GO:0006904;vesicle docking during exocytosis;0.00581078159737819!GO:0051920;peroxiredoxin activity;0.00587326758951176!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00594332122254507!GO:0045047;protein targeting to ER;0.00594332122254507!GO:0051187;cofactor catabolic process;0.00609223783284014!GO:0031902;late endosome membrane;0.00612223607238887!GO:0019902;phosphatase binding;0.00619173943705175!GO:0043021;ribonucleoprotein binding;0.00628244903597185!GO:0008601;protein phosphatase type 2A regulator activity;0.00645205551601896!GO:0046489;phosphoinositide biosynthetic process;0.0064546284368405!GO:0000074;regulation of progression through cell cycle;0.00650173885600674!GO:0016197;endosome transport;0.00651188363077044!GO:0046578;regulation of Ras protein signal transduction;0.00689059493738985!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00695978229914881!GO:0055083;monovalent inorganic anion homeostasis;0.00695978229914881!GO:0055064;chloride ion homeostasis;0.00695978229914881!GO:0030644;cellular chloride ion homeostasis;0.00695978229914881!GO:0043087;regulation of GTPase activity;0.00740854493288624!GO:0006378;mRNA polyadenylation;0.00740854493288624!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00747279862518505!GO:0001726;ruffle;0.00755578607373542!GO:0003746;translation elongation factor activity;0.00757480458088027!GO:0031123;RNA 3'-end processing;0.0076732816707574!GO:0030027;lamellipodium;0.00794620168521211!GO:0050811;GABA receptor binding;0.00799158807024541!GO:0004576;oligosaccharyl transferase activity;0.00800801331595124!GO:0006383;transcription from RNA polymerase III promoter;0.00823409968072773!GO:0005788;endoplasmic reticulum lumen;0.00848038492864236!GO:0000118;histone deacetylase complex;0.00873442302767467!GO:0006401;RNA catabolic process;0.00873553252384441!GO:0008312;7S RNA binding;0.00878379381702068!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00911871882048052!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00932322663391524!GO:0016740;transferase activity;0.00937153811969989!GO:0046474;glycerophospholipid biosynthetic process;0.00979922964536209!GO:0045892;negative regulation of transcription, DNA-dependent;0.00990850659994144!GO:0006414;translational elongation;0.0110774503457686!GO:0006470;protein amino acid dephosphorylation;0.0113439662289503!GO:0009966;regulation of signal transduction;0.0115374349006215!GO:0016859;cis-trans isomerase activity;0.0116922976454839!GO:0042802;identical protein binding;0.0117383241795437!GO:0046467;membrane lipid biosynthetic process;0.011935902967233!GO:0031901;early endosome membrane;0.011935902967233!GO:0016050;vesicle organization and biogenesis;0.011935902967233!GO:0003682;chromatin binding;0.0120845564144124!GO:0009117;nucleotide metabolic process;0.0127355386845132!GO:0004004;ATP-dependent RNA helicase activity;0.0130497376416317!GO:0005774;vacuolar membrane;0.0131434600715281!GO:0006352;transcription initiation;0.0133624804953105!GO:0006916;anti-apoptosis;0.0135642353678691!GO:0006810;transport;0.0137064661836599!GO:0051128;regulation of cellular component organization and biogenesis;0.0138338031321593!GO:0033116;ER-Golgi intermediate compartment membrane;0.014530287284053!GO:0007034;vacuolar transport;0.0150052308879602!GO:0030658;transport vesicle membrane;0.0164825107521244!GO:0030663;COPI coated vesicle membrane;0.0169483545035098!GO:0030126;COPI vesicle coat;0.0169483545035098!GO:0005869;dynactin complex;0.0170433742582649!GO:0032259;methylation;0.0170433742582649!GO:0015980;energy derivation by oxidation of organic compounds;0.0174867946244718!GO:0000209;protein polyubiquitination;0.0181223332840062!GO:0018196;peptidyl-asparagine modification;0.0181223332840062!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0181223332840062!GO:0051252;regulation of RNA metabolic process;0.0186997832868366!GO:0043069;negative regulation of programmed cell death;0.0186997832868366!GO:0030641;cellular hydrogen ion homeostasis;0.0190945989293534!GO:0006405;RNA export from nucleus;0.0193961104969545!GO:0042026;protein refolding;0.0195386280987147!GO:0000314;organellar small ribosomal subunit;0.0197705196677663!GO:0005763;mitochondrial small ribosomal subunit;0.0197705196677663!GO:0043066;negative regulation of apoptosis;0.0204599920238952!GO:0000059;protein import into nucleus, docking;0.0204599920238952!GO:0006611;protein export from nucleus;0.0206420933896309!GO:0005099;Ras GTPase activator activity;0.0209287370861678!GO:0030134;ER to Golgi transport vesicle;0.0209287370861678!GO:0006643;membrane lipid metabolic process;0.0209287370861678!GO:0005545;phosphatidylinositol binding;0.0211173699194422!GO:0030660;Golgi-associated vesicle membrane;0.0211173699194422!GO:0007040;lysosome organization and biogenesis;0.0212008324553087!GO:0065004;protein-DNA complex assembly;0.021270147744122!GO:0031625;ubiquitin protein ligase binding;0.0223022612629148!GO:0008154;actin polymerization and/or depolymerization;0.0223665459267262!GO:0043414;biopolymer methylation;0.0224230791553484!GO:0048487;beta-tubulin binding;0.0226674695237736!GO:0042158;lipoprotein biosynthetic process;0.0226679307852716!GO:0006892;post-Golgi vesicle-mediated transport;0.0228460318305638!GO:0019903;protein phosphatase binding;0.0232054711703854!GO:0007019;microtubule depolymerization;0.0232624841685933!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0233988792675649!GO:0015002;heme-copper terminal oxidase activity;0.0233988792675649!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0233988792675649!GO:0004129;cytochrome-c oxidase activity;0.0233988792675649!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0234088024912982!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0235913194603695!GO:0007033;vacuole organization and biogenesis;0.0237137467989662!GO:0046488;phosphatidylinositol metabolic process;0.0241009641268357!GO:0042578;phosphoric ester hydrolase activity;0.0241217423923898!GO:0035035;histone acetyltransferase binding;0.0245108271625108!GO:0009719;response to endogenous stimulus;0.0245634363188333!GO:0016779;nucleotidyltransferase activity;0.0248835032062547!GO:0003725;double-stranded RNA binding;0.0254832536778718!GO:0030127;COPII vesicle coat;0.0254832536778718!GO:0012507;ER to Golgi transport vesicle membrane;0.0254832536778718!GO:0008361;regulation of cell size;0.0254913271609055!GO:0006364;rRNA processing;0.0254913271609055!GO:0003779;actin binding;0.0254913271609055!GO:0003711;transcription elongation regulator activity;0.0256930310520034!GO:0006497;protein amino acid lipidation;0.0261431145703247!GO:0030258;lipid modification;0.0262865435549197!GO:0006661;phosphatidylinositol biosynthetic process;0.0265209872841233!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0265209872841233!GO:0005905;coated pit;0.0265209872841233!GO:0005938;cell cortex;0.0267503102144001!GO:0006376;mRNA splice site selection;0.027003299717572!GO:0000389;nuclear mRNA 3'-splice site recognition;0.027003299717572!GO:0005885;Arp2/3 protein complex;0.0270250563293908!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0282994321939663!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0282994321939663!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0285399201689916!GO:0030521;androgen receptor signaling pathway;0.0287400800506594!GO:0030119;AP-type membrane coat adaptor complex;0.0298396028283051!GO:0016072;rRNA metabolic process;0.0298849928308866!GO:0006338;chromatin remodeling;0.0298849928308866!GO:0008286;insulin receptor signaling pathway;0.0299021561092609!GO:0043631;RNA polyadenylation;0.0325914031703224!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0327192516502934!GO:0035258;steroid hormone receptor binding;0.0335473345785345!GO:0000339;RNA cap binding;0.0338802430016263!GO:0030131;clathrin adaptor complex;0.0342245949090125!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0342597325878683!GO:0009165;nucleotide biosynthetic process;0.0342853010931405!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0344243024991763!GO:0006301;postreplication repair;0.034741176632445!GO:0001754;eye photoreceptor cell differentiation;0.0349902060677639!GO:0005765;lysosomal membrane;0.0350530769264234!GO:0032984;macromolecular complex disassembly;0.0358555851196279!GO:0030176;integral to endoplasmic reticulum membrane;0.0358555851196279!GO:0016790;thiolester hydrolase activity;0.036289366790867!GO:0044437;vacuolar part;0.0367737384784447!GO:0030041;actin filament polymerization;0.0367845947278677!GO:0000287;magnesium ion binding;0.0369627539877548!GO:0051539;4 iron, 4 sulfur cluster binding;0.0372831825986505!GO:0006818;hydrogen transport;0.0372896380250748!GO:0019894;kinesin binding;0.0374490000250772!GO:0004674;protein serine/threonine kinase activity;0.0374516475493713!GO:0006672;ceramide metabolic process;0.0384377972503749!GO:0006595;polyamine metabolic process;0.0390298354408476!GO:0016853;isomerase activity;0.0392378261387859!GO:0005868;cytoplasmic dynein complex;0.0415541328897926!GO:0000902;cell morphogenesis;0.0418370399068222!GO:0032989;cellular structure morphogenesis;0.0418370399068222!GO:0046839;phospholipid dephosphorylation;0.042113415897905!GO:0005307;choline:sodium symporter activity;0.0428518081934828!GO:0008292;acetylcholine biosynthetic process;0.0428518081934828!GO:0007004;telomere maintenance via telomerase;0.0428518081934828!GO:0016049;cell growth;0.0434907024791041!GO:0007030;Golgi organization and biogenesis;0.0437314908691525!GO:0042271;susceptibility to natural killer cell mediated cytotoxicity;0.0437918886238577!GO:0016741;transferase activity, transferring one-carbon groups;0.0443144358923878!GO:0005852;eukaryotic translation initiation factor 3 complex;0.044434557916197!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0452043441844285!GO:0016251;general RNA polymerase II transcription factor activity;0.0453367575152562!GO:0040029;regulation of gene expression, epigenetic;0.0467978942948119!GO:0008168;methyltransferase activity;0.0468279919685184!GO:0048499;synaptic vesicle membrane organization and biogenesis;0.0468279919685184!GO:0030285;integral to synaptic vesicle membrane;0.0468279919685184!GO:0030004;cellular monovalent inorganic cation homeostasis;0.0469069022043682!GO:0055067;monovalent inorganic cation homeostasis;0.0469069022043682!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0469706365398254!GO:0016566;specific transcriptional repressor activity;0.0469774000130783!GO:0031461;cullin-RING ubiquitin ligase complex;0.0474497724637611!GO:0030742;GTP-dependent protein binding;0.0481728368676873!GO:0030880;RNA polymerase complex;0.048515456442535!GO:0045745;positive regulation of G-protein coupled receptor protein signaling pathway;0.048515456442535!GO:0042706;eye photoreceptor cell fate commitment;0.048515456442535!GO:0046552;photoreceptor cell fate commitment;0.048515456442535!GO:0015992;proton transport;0.048515456442535!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.048515456442535!GO:0016585;chromatin remodeling complex;0.0485270684671731!GO:0000015;phosphopyruvate hydratase complex;0.0485270684671731!GO:0004634;phosphopyruvate hydratase activity;0.0485270684671731!GO:0016788;hydrolase activity, acting on ester bonds;0.0485397867247818!GO:0005100;Rho GTPase activator activity;0.0487510299496431
+|sample_id=10160
+|sample_note=
+|sample_sex=female
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=pineal gland
+|top_motifs=CRX:9.12787857941;VSX1,2:4.2317081714;RORA:3.81789648382;HOX{A6,A7,B6,B7}:3.20807561729;PRRX1,2:2.99550961012;RREB1:2.48711570646;POU6F1:2.46069801781;LHX3,4:2.40191030822;ZFP161:2.3652662914;HBP1_HMGB_SSRP1_UBTF:2.27838426062;TGIF1:2.18619958263;AHR_ARNT_ARNT2:2.12882566824;POU3F1..4:2.11162361363;GFI1:2.06936794053;BPTF:2.00838220235;NRF1:1.9833765631;GATA4:1.98169697251;FOXP3:1.9804537545;CUX2:1.97786569895;ZBTB6:1.93535392156;MED-1{core}:1.88618914133;MYFfamily:1.84849970062;PRDM1:1.83918162009;GCM1,2:1.82573719571;PATZ1:1.81068111857;CDC5L:1.80728223478;ATF2:1.76268310212;FOXM1:1.7396025513;JUN:1.71841381268;ALX1:1.68333321665;BREu{core}:1.66185186327;NKX3-2:1.59199583565;RFX2..5_RFXANK_RFXAP:1.58410283776;FOXA2:1.56388364547;FOX{D1,D2}:1.54347057596;HOX{A4,D4}:1.539620632;REST:1.52451752632;MZF1:1.48741883236;SOX2:1.47992491658;GFI1B:1.433584814;OCT4_SOX2{dimer}:1.42674955637;EGR1..3:1.40906924845;RFX1:1.40119040433;PITX1..3:1.38630478833;GTF2I:1.36617391852;MTF1:1.35734998485;KLF4:1.34397377889;STAT1,3:1.34320431765;MYOD1:1.33031160158;AR:1.31354416981;FOXP1:1.31110767141;FOXN1:1.26723232731;CREB1:1.25970738914;IKZF2:1.24483750625;NFIX:1.23842684179;NANOG:1.23483559003;ADNP_IRX_SIX_ZHX:1.23396734414;TFAP2B:1.21947374698;YY1:1.20977699967;DBP:1.16773371564;ESRRA:1.16462939928;ZNF143:1.10756776469;T:1.08742987604;ALX4:1.04887507778;MAZ:1.04217984025;SREBF1,2:1.03993772488;SOX17:1.01103167701;TLX1..3_NFIC{dimer}:0.991267154129;EP300:0.976923140847;RBPJ:0.973709436704;SMAD1..7,9:0.966712996113;NHLH1,2:0.901766096657;GATA6:0.845075684033;SOX{8,9,10}:0.812883568522;STAT5{A,B}:0.787905761224;SP1:0.769208299212;LMO2:0.747884045824;NFY{A,B,C}:0.72791060389;PAX3,7:0.726798861827;GTF2A1,2:0.72152637817;ATF5_CREB3:0.68278212654;ARID5B:0.671792284846;HSF1,2:0.654378153307;TOPORS:0.624918824931;FOXO1,3,4:0.623909223874;MEF2{A,B,C,D}:0.620014504518;HIC1:0.607251442594;ZIC1..3:0.582307306407;ZBTB16:0.577894550128;POU1F1:0.571948635028;MTE{core}:0.570846937622;NKX6-1,2:0.506423334063;TFAP2{A,C}:0.501784034417;PPARG:0.500753438306;NFIL3:0.485639760345;FOX{I1,J2}:0.473313140235;POU5F1:0.392867253959;SPZ1:0.390974104122;PAX5:0.377822044479;NKX2-3_NKX2-5:0.359894011383;NR1H4:0.2920803834;TAL1_TCF{3,4,12}:0.272367825496;NKX2-1,4:0.27081087712;ELK1,4_GABP{A,B1}:0.24329321465;ATF4:0.239472417137;ZNF384:0.225511882856;HOXA9_MEIS1:0.220955478274;PAX8:0.21275931991;PAX1,9:0.211730741847;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.183887067363;NANOG{mouse}:0.150250548923;PAX6:0.143584057885;PDX1:0.0733920805246;TEF:0.0577986685287;PAX2:0.0500043575825;EBF1:0.00350159532201;MYBL2:-0.0249447353683;IRF7:-0.0346964914181;NFATC1..3:-0.0412401473132;ZEB1:-0.041547260056;CDX1,2,4:-0.0977797633043;FOXL1:-0.100015335466;GZF1:-0.136808597751;SOX5:-0.141481202869;LEF1_TCF7_TCF7L1,2:-0.167889913571;FOXQ1:-0.18077009595;ATF6:-0.184621444168;FOX{F1,F2,J1}:-0.19176896535;HIF1A:-0.222111076275;NR3C1:-0.271247764762;IRF1,2:-0.280088907383;RXR{A,B,G}:-0.290366598597;EVI1:-0.306556568236;STAT2,4,6:-0.307025828352;FOXD3:-0.308876060911;ZNF423:-0.320153395556;HNF1A:-0.321686045723;HMGA1,2:-0.323355339069;NFE2:-0.326700908515;HAND1,2:-0.383785638433;NFE2L2:-0.386477054122;SPI1:-0.39981150724;TFDP1:-0.405889647725;NFE2L1:-0.415588915075;XCPE1{core}:-0.428024964077;TLX2:-0.434537175848;PAX4:-0.441108995024;SNAI1..3:-0.447807102256;CEBPA,B_DDIT3:-0.475002265987;ONECUT1,2:-0.479789958924;ELF1,2,4:-0.501805397536;SPIB:-0.530550743981;NR5A1,2:-0.587023969512;FOSL2:-0.58737255543;TFCP2:-0.610709770217;AIRE:-0.612633320551;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.617373143311;ETS1,2:-0.707457503963;NKX2-2,8:-0.715737336455;DMAP1_NCOR{1,2}_SMARC:-0.718789398401;PBX1:-0.746621440748;HLF:-0.74707768819;RXRA_VDR{dimer}:-0.786622583292;UFEwm:-0.801809700608;IKZF1:-0.816794732828;bHLH_family:-0.8341203639;HNF4A_NR2F1,2:-0.834145877158;NFKB1_REL_RELA:-0.850149150328;TEAD1:-0.85594967517;MAFB:-0.903129247457;MYB:-0.923437246033;HMX1:-0.962643977948;BACH2:-0.971989290533;E2F1..5:-0.974467573365;XBP1:-1.01958678949;NKX3-1:-1.02870995003;SRF:-1.04343399699;FOS_FOS{B,L1}_JUN{B,D}:-1.0703044034;TFAP4:-1.10130709454;TBX4,5:-1.14455850893;TP53:-1.14601525898;RUNX1..3:-1.18323405138;HOX{A5,B5}:-1.3559989399;POU2F1..3:-1.46880632886;TBP:-1.51066493597;ZNF238:-1.56534007582;ESR1:-1.72456455274;NR6A1:-1.84187545588;GLI1..3:-2.02948925207;EN1,2:-2.41873446105;ZNF148:-2.69695490816;HES1:-3.7343175505
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10160-103A7;search_select_hide=table117:FF:10160-103A7
 }}

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FF:10160-103A7: Difference between revisions

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Latest revision as of 12:23, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0