FF:10162-103A9: Difference between revisions

Latest revision as of 12:23, 3 June 2020

Name:	pituitary gland, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12229
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	pituitary gland
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005416

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12229		CAGE		DRX008709		DRR009581

Accession ID Hg19

Library id		BAM		CTSS
CNhs12229		DRZ001006		DRZ002391

Accession ID Hg38

Library id		BAM		CTSS
CNhs12229		DRZ012356		DRZ013741

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10033		download		download		download		download

RNA-Seq Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00005416
sRNA-Seq		SAMD00005416

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
RDhi10098		RNA-Seq		DRX057155		DRR062914
SRhi10007.ACTTGA		sRNA-Seq		DRX037341		DRR041707

Accession ID Hg19

Library id		BAM		CTSS
RDhi10098		DRZ007990
SRhi10007.ACTTGA		DRZ007349

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.0891
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.177
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.372
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.467
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	1.105
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.163
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0534
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.0891
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0195
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0.84
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0891
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0851
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.343
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.205
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.19
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.316
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-1.047
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.158
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.163
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.33
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0891
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0546
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.163
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0891
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.163
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.576
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0891
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.163
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.163
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.0891
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.45
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12229

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00742
MA0003.1	MA0003.1	0.229
MA0004.1	MA0004.1	0.455
MA0006.1	MA0006.1	0.414
MA0007.1	MA0007.1	0.682
MA0009.1	MA0009.1	0.824
MA0014.1	MA0014.1	0.828
MA0017.1	MA0017.1	0.0117
MA0018.2	MA0018.2	0.00627
MA0019.1	MA0019.1	0.948
MA0024.1	MA0024.1	0.934
MA0025.1	MA0025.1	0.0492
MA0027.1	MA0027.1	0.0929
MA0028.1	MA0028.1	0.546
MA0029.1	MA0029.1	0.291
MA0030.1	MA0030.1	0.0111
MA0031.1	MA0031.1	0.35
MA0035.2	MA0035.2	0.0476
MA0038.1	MA0038.1	0.114
MA0039.2	MA0039.2	0.875
MA0040.1	MA0040.1	0.855
MA0041.1	MA0041.1	0.978
MA0042.1	MA0042.1	0.598
MA0043.1	MA0043.1	9.78425e-4
MA0046.1	MA0046.1	0.587
MA0047.2	MA0047.2	0.501
MA0048.1	MA0048.1	0.115
MA0050.1	MA0050.1	0.602
MA0051.1	MA0051.1	0.81
MA0052.1	MA0052.1	0.436
MA0055.1	MA0055.1	0.0639
MA0057.1	MA0057.1	0.4
MA0058.1	MA0058.1	0.437
MA0059.1	MA0059.1	0.0388
MA0060.1	MA0060.1	0.313
MA0061.1	MA0061.1	0.00459
MA0062.2	MA0062.2	0.617
MA0065.2	MA0065.2	8.34784e-5
MA0066.1	MA0066.1	0.0316
MA0067.1	MA0067.1	0.656
MA0068.1	MA0068.1	0.331
MA0069.1	MA0069.1	0.821
MA0070.1	MA0070.1	0.634
MA0071.1	MA0071.1	0.0647
MA0072.1	MA0072.1	0.81
MA0073.1	MA0073.1	0.442
MA0074.1	MA0074.1	0.0901
MA0076.1	MA0076.1	0.0917
MA0077.1	MA0077.1	0.88
MA0078.1	MA0078.1	0.14
MA0079.2	MA0079.2	0.59
MA0080.2	MA0080.2	7.31671e-7
MA0081.1	MA0081.1	0.258
MA0083.1	MA0083.1	0.00285
MA0084.1	MA0084.1	0.526
MA0087.1	MA0087.1	0.171
MA0088.1	MA0088.1	0.494
MA0090.1	MA0090.1	0.459
MA0091.1	MA0091.1	0.651
MA0092.1	MA0092.1	0.126
MA0093.1	MA0093.1	0.513
MA0099.2	MA0099.2	2.15298e-11
MA0100.1	MA0100.1	0.48
MA0101.1	MA0101.1	0.0129
MA0102.2	MA0102.2	0.182
MA0103.1	MA0103.1	0.506
MA0104.2	MA0104.2	0.353
MA0105.1	MA0105.1	2.59279e-4
MA0106.1	MA0106.1	0.0493
MA0107.1	MA0107.1	0.0102
MA0108.2	MA0108.2	0.624
MA0111.1	MA0111.1	0.681
MA0112.2	MA0112.2	1.34979e-4
MA0113.1	MA0113.1	0.996
MA0114.1	MA0114.1	0.00602
MA0115.1	MA0115.1	0.555
MA0116.1	MA0116.1	0.0023
MA0117.1	MA0117.1	0.842
MA0119.1	MA0119.1	0.0266
MA0122.1	MA0122.1	0.303
MA0124.1	MA0124.1	0.654
MA0125.1	MA0125.1	0.0898
MA0131.1	MA0131.1	0.641
MA0135.1	MA0135.1	0.0588
MA0136.1	MA0136.1	0.00126
MA0137.2	MA0137.2	0.0213
MA0138.2	MA0138.2	0.487
MA0139.1	MA0139.1	0.309
MA0140.1	MA0140.1	0.00387
MA0141.1	MA0141.1	0.00941
MA0142.1	MA0142.1	0.684
MA0143.1	MA0143.1	0.27
MA0144.1	MA0144.1	0.995
MA0145.1	MA0145.1	0.191
MA0146.1	MA0146.1	0.0543
MA0147.1	MA0147.1	0.202
MA0148.1	MA0148.1	0.261
MA0149.1	MA0149.1	0.0125
MA0150.1	MA0150.1	0.00985
MA0152.1	MA0152.1	0.797
MA0153.1	MA0153.1	0.871
MA0154.1	MA0154.1	0.00716
MA0155.1	MA0155.1	0.29
MA0156.1	MA0156.1	0.0845
MA0157.1	MA0157.1	0.957
MA0159.1	MA0159.1	0.0399
MA0160.1	MA0160.1	0.0387
MA0162.1	MA0162.1	0.0777
MA0163.1	MA0163.1	2.06095e-6
MA0164.1	MA0164.1	0.558
MA0258.1	MA0258.1	0.0041
MA0259.1	MA0259.1	0.622

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12229

Novel motif	Logo	P-value
1	1	0.064
10	10	0.0594
100	100	0.413
101	101	0.685
102	102	0.917
103	103	0.102
104	104	0.207
105	105	0.807
106	106	0.00122
107	107	0.01
108	108	0.393
109	109	0.0148
11	11	0.0187
110	110	0.0967
111	111	0.0664
112	112	0.487
113	113	0.625
114	114	0.0757
115	115	0.642
116	116	0.0675
117	117	0.0675
118	118	0.296
119	119	0.0608
12	12	0.992
120	120	0.138
121	121	0.806
122	122	0.605
123	123	0.771
124	124	0.704
125	125	0.0583
126	126	0.25
127	127	0.322
128	128	0.0305
129	129	0.242
13	13	0.016
130	130	0.34
131	131	0.413
132	132	0.888
133	133	0.277
134	134	0.559
135	135	0.278
136	136	0.174
137	137	0.156
138	138	0.735
139	139	0.299
14	14	0.925
140	140	0.694
141	141	0.738
142	142	0.294
143	143	0.0322
144	144	0.426
145	145	0.0874
146	146	0.451
147	147	0.654
148	148	0.0054
149	149	0.125
15	15	0.116
150	150	0.19
151	151	0.508
152	152	0.0575
153	153	0.873
154	154	0.891
155	155	0.983
156	156	0.77
157	157	0.452
158	158	0.0923
159	159	0.0153
16	16	0.108
160	160	0.0522
161	161	0.337
162	162	0.899
163	163	0.753
164	164	0.145
165	165	0.245
166	166	0.964
167	167	0.911
168	168	0.122
169	169	0.00743
17	17	0.0467
18	18	0.0693
19	19	0.144
2	2	0.68
20	20	0.652
21	21	0.0816
22	22	0.148
23	23	0.0834
24	24	0.212
25	25	0.733
26	26	0.00383
27	27	0.459
28	28	0.793
29	29	0.0341
3	3	0.113
30	30	0.836
31	31	0.769
32	32	0.00886
33	33	0.156
34	34	0.496
35	35	0.395
36	36	0.0943
37	37	0.0639
38	38	0.194
39	39	0.188
4	4	0.758
40	40	0.065
41	41	0.192
42	42	0.381
43	43	0.102
44	44	0.0407
45	45	0.659
46	46	0.0424
47	47	0.0997
48	48	0.0951
49	49	0.147
5	5	0.372
50	50	0.332
51	51	0.285
52	52	0.194
53	53	0.94
54	54	0.33
55	55	0.651
56	56	0.558
57	57	0.203
58	58	0.507
59	59	0.0309
6	6	0.587
60	60	0.0301
61	61	0.166
62	62	0.176
63	63	0.0574
64	64	0.187
65	65	0.081
66	66	0.362
67	67	0.309
68	68	0.945
69	69	0.216
7	7	0.172
70	70	0.0365
71	71	0.0271
72	72	0.767
73	73	0.0621
74	74	0.282
75	75	0.0733
76	76	0.601
77	77	0.118
78	78	0.0212
79	79	0.374
8	8	0.0321
80	80	0.862
81	81	0.254
82	82	0.258
83	83	0.152
84	84	0.496
85	85	0.0474
86	86	0.305
87	87	0.00305
88	88	0.667
89	89	0.254
9	9	0.328
90	90	0.0906
91	91	0.523
92	92	0.447
93	93	0.792
94	94	0.114
95	95	0.0576
96	96	0.459
97	97	0.884
98	98	0.261
99	99	0.289

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12229

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010162 human pituitary gland - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000007 (pituitary gland)
0001894 (diencephalon)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0003296 (gland of diencephalon)
0010133 (neuroendocrine gland)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001890 (forebrain)
0000949 (endocrine system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010162 (human pituitary gland - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000007,UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000949,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001890,UBERON:0001894,UBERON:0002050,UBERON:0002346,UBERON:0002368,UBERON:0002530,UBERON:0002532,UBERON:0002616,UBERON:0002780,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0003296,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
+|DRA_sample_Accession=CAGE@SAMD00005416
-|ancestors_in_cell_lineage_facet=
+|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005416!sRNA-Seq@SAMD00005416
+|HumanCAGEScanFiles=NCig10033;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pituitary%2520gland%252c%2520adult%252c%2520donor10252.NCig10033.10162-103A9.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pituitary%2520gland%252c%2520adult%252c%2520donor10252.NCig10033.10162-103A9.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pituitary%2520gland%252c%2520adult%252c%2520donor10252.NCig10033.10162-103A9.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/pituitary%2520gland%252c%2520adult%252c%2520donor10252.NCig10033.10162-103A9.hg19.GCTATA.pairs.bed.gz
+|accession_numbers=CAGE;DRX008709;DRR009581;DRZ001006;DRZ002391;DRZ012356;DRZ013741
+|accession_numbers_RNASeq=RNA-Seq;DRX057155;DRR062914;DRZ007990!sRNA-Seq;DRX037341;DRR041707;DRZ007349
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000007,UBERON:0001894,UBERON:0000479,UBERON:0004121,UBERON:0003296,UBERON:0010133,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0002616,UBERON:0002780,UBERON:0002530,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001890,UBERON:0000949
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010162
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
+|expression_enrichment_score=chr3:87325728..87325739,-!p1@POU1F1!2.59!390.21!POU1F1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.44!272.97!PEG3;;chr9:114287433..114287513,+!p1@ZNF483!2.13!332.16!ZNF483;;chr5:134369879..134369898,-!p2@PITX1!1.87!72.62!PITX1;;chr12:55413751..55413765,+!p1@NEUROD4!1.83!66.02!NEUROD4;;chr2:166326200..166326216,+!p1@CSRNP3!1.81!90.84!CSRNP3;;chr12:103351444..103351461,+!p1@ASCL1!1.74!53.73!ASCL1;;chr13:72441315..72441454,-!p1@DACH1!1.73!102.22!DACH1;;chr3:114477881..114477914,-!p17@ZBTB20!1.71!50.09!ZBTB20;;chr19:38085768..38085821,+!p1@ZNF540!1.67!66.93!ZNF540;;chr3:87325636..87325643,-!p2@POU1F1!1.65!43.26!POU1F1;;chr7:63505799..63505904,+!p1@ZNF727!1.63!42.12!ZNF727;;chr19:46801639..46801699,+!p1@HIF3A!1.62!40.52!HIF3A;;chr1:214161272..214161322,+!p1@PROX1!1.60!53.96!PROX1;;chr5:134369905..134369972,-!p1@PITX1!1.58!55.32!PITX1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!1.57!75.58!ZNF395;;chrX:24169518..24169522,+!p8@ZFX!1.51!31.65!ZFX;;chr8:53166899..53166914,-!p3@ST18!1.50!30.96!ST18;;chr17:53342311..53342400,+!p1@HLF!1.47!32.56!HLF;;chr20:20348740..20348757,+!p1@INSM1!1.46!27.77!INSM1;;chr3:114819124..114819200,-!p3@ZBTB20!1.45!61.92!ZBTB20;;chr2:2334997..2335053,-!p1@MYT1L!1.44!26.64!MYT1L;;chr14:61116183..61116208,-!p1@SIX1!1.42!93.80!SIX1;;chr14:60975883..60975911,+!p1@SIX6!1.41!24.59!SIX6;;chr11:113930425..113930471,+!p1@ZBTB16!1.39!33.47!ZBTB16;;chr2:2328299..2328363,-!p3@MYT1L!1.39!23.68!MYT1L;;chr12:106976678..106976708,+!p2@RFX4!1.37!22.31!RFX4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.63!ZBED1;;chr6:152126790..152126828,+!p3@ESR1!1.34!20.72!ESR1;;chrX:101186981..101187030,-!p1@ZMAT1!1.31!62.83!ZMAT1;;chr1:151804244..151804310,-!p1@RORC!1.30!18.90!RORC;;chr1:165414325..165414369,-!p1@RXRG!1.30!18.90!RXRG;;chr5:178368186..178368238,+!p1@ZNF454!1.29!33.24!ZNF454;;chr9:77112244..77112262,+!p1@RORB!1.29!20.94!RORB;;chr8:40755333..40755352,-!p1@ZMAT4!1.29!18.44!ZMAT4;;chr3:181429704..181429722,+!p1@SOX2!1.28!18.21!SOX2;;chr3:114173720..114173794,-!p6@ZBTB20!1.27!17.76!ZBTB20;;chr8:93107451..93107468,-!p2@RUNX1T1!1.26!17.30!RUNX1T1;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.26!17.30!SMARCE1;;chr2:95963052..95963106,+!p1@KCNIP3!1.26!17.07!KCNIP3;;chr11:16629261..16629284,-!p1@SOX6!1.26!17.07!SOX6;;chr2:45168834..45168847,+!p2@SIX3!1.25!16.85!SIX3;;chr1:168250110..168250120,+!p2@TBX19!1.25!16.62!TBX19;;chr3:25469724..25469773,+!p1@RARB!1.24!23.45!RARB;;chr11:16629369..16629392,-!p5@SOX6!1.23!16.16!SOX6;;chr14:74256787..74256858,-!p6@C14orf43!1.23!16.16!C14orf43;;chr11:66188503..66188511,+!p1@NPAS4!1.20!15.03!NPAS4;;chr12:24102576..24102623,-!p2@SOX5!1.20!15.03!SOX5;;chr2:192015701..192015743,-!p1@STAT4!1.18!19.58!STAT4;;chr2:45168997..45169020,+!p4@SIX3!1.18!14.12!SIX3;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.17!76.72!ZNF10;;chr14:58797974..58798011,+!p3@ARID4A!1.17!13.89!ARID4A;;chr11:8040739..8040815,+!p4@TUB!1.16!13.43!TUB;;chr19:57352109..57352153,-!p2@ZIM2!1.15!12.98!ZIM2;;chr6:19837592..19837621,+!p1@ID4!1.14!78.09!ID4;;chr4:206390..206444,+!p1@ZNF876P!1.14!22.99!ZNF876P;;chr11:113930291..113930339,+!p2@ZBTB16!1.14!20.94!ZBTB16;;chr9:3525867..3525902,-!p3@RFX3!1.13!43.03!RFX3;;chr1:8585945..8586056,-!p3@RERE!1.13!41.89!RERE;;chr3:187463179..187463201,-!p2@BCL6!1.12!50.54!BCL6;;chr4:149363494..149363543,-!p1@NR3C2!1.12!12.07!NR3C2;;chr3:114866084..114866118,-!p2@ZBTB20!1.11!43.71!ZBTB20;;chr9:102584159..102584174,+!p2@NR4A3!1.11!21.40!NR4A3;;chr4:111544219..111544240,-!p1@PITX2!1.11!11.84!PITX2;;chr1:42384343..42384380,-!p4@HIVEP3!1.10!11.61!HIVEP3;;chr14:60975858..60975869,+!p2@SIX6!1.10!11.61!SIX6;;chr6:126112074..126112144,+!p1@NCOA7!1.09!150.03!NCOA7;;chr18:22932080..22932170,-!p1@ZNF521!1.09!47.81!ZNF521;;chr19:46800289..46800327,+!p2@HIF3A!1.09!11.38!HIF3A;;chr4:81118647..81118666,+!p1@PRDM8!1.08!14.80!PRDM8;;chr3:141105705..141105770,+!p4@ZBTB38!1.08!13.43!ZBTB38;;chr16:67197654..67197716,+!p3@HSF4!1.08!11.16!HSF4;;chr12:106976656..106976672,+!p4@RFX4!1.08!11.16!RFX4;;chr14:29235961..29236008,+!p1@FOXG1!1.08!11.16!FOXG1;;chr19:54058073..54058088,+!p1@ZNF331!1.08!10.93!ZNF331;;chr3:138665937..138665968,-!p1@FOXL2!1.07!10.70!FOXL2;;chr3:114343768..114343822,-!p1@ZBTB20!1.05!45.76!ZBTB20;;chr20:45142154..45142227,-!p1@ZNF334!1.05!20.49!ZNF334;;chr21:39870339..39870443,-!p1@ERG!1.05!10.24!ERG;;chr2:178128250..178128293,-!p6@NFE2L2!1.04!25.27!NFE2L2;;chr18:52989031..52989079,-!p2@TCF4!1.04!23.68!TCF4;;chr9:139094988..139095012,-!p1@LHX3!1.04!10.02!LHX3;;chr3:114343039..114343085,-!p8@ZBTB20!1.04!10.02!ZBTB20;;chr15:77197655..77197716,-!p1@SCAPER!1.03!87.88!SCAPER;;chr9:3525968..3526016,-!p1@RFX3!1.03!57.14!RFX3;;chr1:61548069..61548102,+!p3@NFIA!1.03!24.13!NFIA;;chr3:24536253..24536328,-!p1@THRB!1.03!18.44!THRB;;chr12:106976774..106976788,+!p1@RFX4!1.03!9.79!RFX4;;chr12:52445218..52445237,+!p1@NR4A1!1.02!121.12!NR4A1;;chr14:21994449..21994524,-!p2@SALL2!1.02!28.46!SALL2;;chr3:107318157..107318172,+!p6@BBX!1.02!13.43!BBX;;chr12:125003087..125003141,-!p4@NCOR2!1.02!12.29!NCOR2;;chr11:47400078..47400106,-!p1@SPI1!1.02!9.56!SPI1;;chr11:125034640..125034655,+!p1@PKNOX2!1.01!9.33!PKNOX2;;chr3:24206603..24206613,-!p17@THRB!1.01!9.33!THRB;;chr19:22193731..22193751,-!p1@ZNF208!1.01!9.33!ZNF208;;chr2:178128199..178128245,-!p3@NFE2L2!1.00!49.40!NFE2L2;;chr12:26277956..26277980,-!p1@BHLHE41!1.00!33.24!BHLHE41;;chr1:209979467..209979494,-!p1@IRF6!1.00!10.24!IRF6;;chr10:28034739..28034756,-!p1@MKX!1.00!9.11!MKX;;chr14:58798013..58798071,+!p2@ARID4A!1.00!9.11!ARID4A;;chr6:168333280..168333294,+!p9@MLLT4!1.00!9.11!MLLT4;;chr4:146859927..146860055,-!p1@ZNF827!0.99!54.87!ZNF827;;chr8:77593474..77593612,+!p1@ZFHX4!0.99!38.25!ZFHX4;;chr6:152011654..152011682,+!p1@ESR1!0.99!8.88!ESR1;;chr4:106068026..106068084,+!p1@TET2!0.98!79.91!TET2;;chr15:61521417..61521460,-!p2@RORA!0.98!19.58!RORA;;chr7:73038839..73038862,-!p1@MLXIPL!0.98!8.65!MLXIPL;;chr8:10588010..10588030,-!p1@SOX7!0.98!8.65!SOX7;;chr13:72441506..72441562,-!p3@DACH1!0.98!8.65!DACH1;;chr2:45236540..45236577,-!p1@SIX2!0.98!8.65!SIX2;;chr3:114477934..114477961,-!p14@ZBTB20!0.98!8.65!ZBTB20;;chr2:214016314..214016343,-!p2@IKZF2!0.97!14.34!IKZF2;;chr2:192015750..192015793,-!p2@STAT4!0.97!11.38!STAT4;;chr2:45168875..45168916,+!p1@SIX3!0.97!8.42!SIX3;;chr15:31658288..31658338,+!p4@KLF13!0.97!8.42!KLF13;;chr4:87928413..87928433,+!p3@AFF1!0.96!52.59!AFF1;;chr12:133707172..133707202,+!p2@ZNF10!0.96!19.12!ZNF10;;chr18:52989565..52989623,-!p9@TCF4!0.96!10.47!TCF4;;chr7:150974206..150974255,-!p1@SMARCD3!0.95!50.77!SMARCD3;;chr9:3525910..3525955,-!p4@RFX3!0.95!24.36!RFX3;;chr11:113930401..113930422,+!p3@ZBTB16!0.95!7.97!ZBTB16;;chr13:72441074..72441172,-!p2@DACH1!0.95!7.97!DACH1;;chr2:45169193..45169219,+!p3@SIX3!0.95!7.97!SIX3;;chr5:88178983..88179012,-!p1@MEF2C!0.94!61.47!MEF2C;;chr14:24020938..24020988,-!p1@ZFHX2!0.94!11.16!ZFHX2;;chr3:126076242..126076257,-!p1@KLF15!0.94!9.79!KLF15;;chr3:169381420..169381535,-!p1@MECOM!0.94!9.11!MECOM;;chr1:165414414..165414430,-!p3@RXRG!0.94!7.74!RXRG;;chr3:71179699..71179744,-!p2@FOXP1!0.93!58.28!FOXP1;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.93!51.68!ZNF580;;chr5:43065197..43065244,+!p5@ZNF131!0.93!14.80!ZNF131;;chr3:42947600..42947680,+!p1@ZNF662!0.93!10.93!ZNF662;;chr12:26277817..26277863,-!p2@BHLHE41!0.93!10.24!BHLHE41;;chr12:24715376..24715432,-!p1@SOX5!0.93!9.56!SOX5;;chr11:31832658..31832681,-!p1@PAX6!0.93!7.51!PAX6;;chr19:54041669..54041697,+!p2@ZNF331!0.93!7.51!ZNF331;;chr4:124374..124410,+!p2@ZNF718!0.92!79.00!ZNF718;;chr10:35484804..35484902,+!p2@CREM!0.92!28.91!CREM;;chr3:40547564..40547616,+!p1@ZNF620!0.92!10.47!ZNF620;;chr19:44764031..44764072,+!p1@ZNF233!0.92!9.11!ZNF233;;chrX:101187036..101187056,-!p2@ZMAT1!0.92!7.97!ZMAT1;;chr22:41763452..41763466,+!p2@TEF!0.92!7.29!TEF;;chr2:2335109..2335134,-!p2@MYT1L!0.92!7.29!MYT1L;;chr3:114819101..114819121,-!p7@ZBTB20!0.92!7.29!ZBTB20;;chr19:23578226..23578285,-!p1@ZNF91!0.91!126.12!ZNF91;;chr19:20748574..20748599,-!p1@ZNF737!0.91!44.39!ZNF737;;chr21:47063625..47063658,+!p1@PCBP3!0.91!32.10!PCBP3;;chr19:56988677..56988729,-!p1@ZNF667!0.91!12.98!ZNF667;;chr19:46801484..46801498,+!p9@HIF3A!0.91!7.06!HIF3A;;chr4:149363475..149363492,-!p2@NR3C2!0.91!7.06!NR3C2;;chr6:152126830..152126847,+!p4@ESR1!0.91!7.06!ESR1;;chr11:16133391..16133439,-!p6@SOX6!0.91!7.06!SOX6;;chr15:57025759..57025811,-!p2@ZNF280D!0.90!37.56!ZNF280D;;chr19:58220517..58220583,-!p1@ZNF154!0.90!22.77!ZNF154;;chr6:126102254..126102289,+!p5@NCOA7!0.90!19.81!NCOA7;;chrX:84498989..84499003,+!p1@ZNF711!0.90!9.79!ZNF711;;chr14:61116168..61116180,-!p2@SIX1!0.89!7.74!SIX1;;chrX:147582254..147582320,+!p1@AFF2!0.89!6.83!AFF2;;chr1:165414382..165414394,-!p4@RXRG!0.89!6.83!RXRG;;chr1:216896752..216896778,-!p1@ESRRG!0.89!6.83!ESRRG;;chr19:21688387..21688432,+!p1@ZNF429!0.88!41.66!ZNF429;;chr1:61547894..61547968,+!p2@NFIA!0.88!20.03!NFIA;;chr1:164528297..164528309,+!p9@PBX1!0.88!8.65!PBX1;;chr19:58545454..58545498,+!p1@ZSCAN1!0.88!6.60!ZSCAN1;;chr2:2335070..2335098,-!p4@MYT1L!0.88!6.60!MYT1L;;chr11:16627614..16627651,-!p4@SOX6!0.88!6.60!SOX6;;chrX:147582130..147582147,+!p3@AFF2!0.88!6.60!AFF2;;chr13:45151403..45151433,-!p5@TSC22D1!0.87!14.57!TSC22D1;;chr3:126076264..126076305,-!p2@KLF15!0.87!9.11!KLF15;;chr5:88179518..88179569,-!p5@MEF2C!0.87!8.65!MEF2C;;chr18:6414884..6414942,-!p1@L3MBTL4!0.87!8.20!L3MBTL4;;chr17:80797886..80797906,-!p1@ZNF750!0.87!6.37!ZNF750;;chr18:55102628..55102646,+!p2@ONECUT2!0.87!6.37!ONECUT2;;chr11:125034586..125034604,+!p3@PKNOX2!0.87!6.37!PKNOX2;;chr1:165414227..165414242,-!p2@RXRG!0.87!6.37!RXRG;;chr1:61542891..61542920,+!p12@NFIA!0.87!6.37!NFIA;;chr2:45168959..45168990,+!p6@SIX3!0.87!6.37!SIX3;;chr3:24206934..24206942,-!p24@THRB!0.87!6.37!THRB;;chr5:88179017..88179046,-!p2@MEF2C!0.86!26.41!MEF2C;;chr17:7492684..7492778,-!p2@SOX15!0.86!13.66!SOX15;;chrX:84499081..84499115,+!p2@ZNF711!0.86!9.33!ZNF711;;chr19:37464063..37464127,+!p2@ZNF568!0.86!8.42!ZNF568;;chr3:141868293..141868355,-!p2@TFDP2!0.85!56.92!TFDP2;;chr19:9434841..9434886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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000949;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001894;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002368;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0010133
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 34: / Line 45: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%252c%2520adult%252c%2520donor10252.CNhs12229.10162-103A9.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%252c%2520adult%252c%2520donor10252.CNhs12229.10162-103A9.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%252c%2520adult%252c%2520donor10252.CNhs12229.10162-103A9.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pituitary%2520gland%252c%2520adult%252c%2520donor10252.CNhs12229.10162-103A9.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pituitary%2520gland%252c%2520adult%252c%2520donor10252.CNhs12229.10162-103A9.hg38.nobarcode.ctss.bed.gz
 |id=FF:10162-103A9
-|is_a=EFO:0002091;;FF:0000002;;FF:0000004;;FF:0000210;;FF:0010162
+|is_a=EFO:0002091;;FF:0000002;;FF:0010162
+|is_obsolete=
+|library_id=CNhs12229
+|library_id_phase_based=2:CNhs12229
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10162
+|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10007.ACTTGA.10162
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10162
+|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10007.ACTTGA.10162
 |name=pituitary gland, adult, donor10252
 |namespace=FANTOM5
@@ Line 41: / Line 66: @@
 |profile_cagescan=NCig10033,,,
 |profile_hcage=CNhs12229,LSID852,release009,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=SRhi10007,,,
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 |rna_box=103
 |rna_catalog_number=
@@ Line 55: / Line 83: @@
 |rna_tube_id=103A9
 |rna_weight_ug=94.7775
+|rnaseq_library_id=RDhi10098!SRhi10007.ACTTGA
 |sample_age=76
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 68: / Line 98: @@
 |sample_ethnicity=
 |sample_experimental_condition=
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transport;2.52367069748393e-53!GO:0044237;cellular metabolic process;5.26355418356913e-53!GO:0045184;establishment of protein localization;1.06063182531008e-49!GO:0008104;protein localization;3.70805437919483e-49!GO:0043233;organelle lumen;5.92465532174266e-48!GO:0031974;membrane-enclosed lumen;5.92465532174266e-48!GO:0030529;ribonucleoprotein complex;5.09971899638984e-47!GO:0016043;cellular component organization and biogenesis;1.16626554884466e-45!GO:0043283;biopolymer metabolic process;3.68032444231688e-41!GO:0046907;intracellular transport;2.30292024399746e-40!GO:0031090;organelle membrane;3.9958823309462e-39!GO:0010467;gene expression;2.68027112583346e-37!GO:0006396;RNA processing;5.64977569233419e-37!GO:0016071;mRNA metabolic process;2.72206709295883e-36!GO:0006886;intracellular protein transport;3.73188277304955e-34!GO:0031981;nuclear lumen;9.94127924943919e-34!GO:0005739;mitochondrion;2.80201515054648e-33!GO:0051649;establishment of cellular localization;2.17092962193218e-32!GO:0019538;protein metabolic process;9.95910194318273e-32!GO:0043234;protein complex;1.87287222081748e-31!GO:0051641;cellular localization;3.01184831589753e-31!GO:0008380;RNA splicing;2.47091175003569e-30!GO:0006397;mRNA processing;5.73586068803212e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.55781513571327e-29!GO:0044260;cellular macromolecule metabolic process;3.5121164749623e-27!GO:0044267;cellular protein metabolic process;3.68482390728191e-27!GO:0016192;vesicle-mediated transport;8.09615578535779e-27!GO:0031967;organelle envelope;4.88538347375374e-24!GO:0031975;envelope;8.44564166521116e-24!GO:0005654;nucleoplasm;1.29734906855813e-23!GO:0016070;RNA metabolic process;2.83082841758694e-23!GO:0005794;Golgi apparatus;1.37583089730599e-22!GO:0005840;ribosome;2.63808716366863e-22!GO:0044429;mitochondrial part;5.19318310541013e-22!GO:0005829;cytosol;1.54500242372817e-21!GO:0006412;translation;1.9359346559291e-21!GO:0044451;nucleoplasm part;3.18840867627022e-21!GO:0006512;ubiquitin cycle;8.90479223476938e-21!GO:0000166;nucleotide binding;9.17170267244693e-21!GO:0005681;spliceosome;2.48319284803911e-20!GO:0003676;nucleic acid binding;1.35858311517772e-19!GO:0006119;oxidative phosphorylation;1.01475158864298e-18!GO:0065003;macromolecular complex assembly;2.10521281465787e-18!GO:0012505;endomembrane system;5.49571908259997e-18!GO:0003735;structural constituent of ribosome;3.08208912732761e-17!GO:0048193;Golgi vesicle transport;3.36461152847094e-17!GO:0006996;organelle organization and biogenesis;9.06544915247779e-17!GO:0016874;ligase activity;1.46475503890347e-16!GO:0006457;protein folding;2.58582996144585e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;3.87397798379438e-16!GO:0006511;ubiquitin-dependent protein catabolic process;4.75478013441131e-16!GO:0019941;modification-dependent protein catabolic process;8.68560475960719e-16!GO:0043632;modification-dependent macromolecule catabolic process;8.68560475960719e-16!GO:0043412;biopolymer modification;8.83260701841458e-16!GO:0033279;ribosomal subunit;1.11647612642322e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.13488921799195e-15!GO:0008134;transcription factor binding;1.18226184931076e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.21964722228826e-15!GO:0016462;pyrophosphatase activity;1.25253912432902e-15!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.31619819356193e-15!GO:0044257;cellular protein catabolic process;1.88408278982049e-15!GO:0022607;cellular component assembly;2.04378223638843e-15!GO:0031982;vesicle;3.57973384927143e-15!GO:0019866;organelle inner membrane;6.48512987364144e-15!GO:0017111;nucleoside-triphosphatase activity;1.2384527650234e-14!GO:0005740;mitochondrial envelope;1.24259289098259e-14!GO:0043687;post-translational protein modification;1.46011332797042e-14!GO:0031410;cytoplasmic vesicle;1.46011332797042e-14!GO:0006464;protein modification process;1.72657800891882e-14!GO:0044265;cellular macromolecule catabolic process;1.8433720969606e-14!GO:0031966;mitochondrial membrane;1.8433720969606e-14!GO:0009059;macromolecule biosynthetic process;2.68545619896633e-14!GO:0005743;mitochondrial inner membrane;4.06609885780798e-14!GO:0016604;nuclear body;7.04909169622254e-14!GO:0032553;ribonucleotide binding;1.22795447276579e-13!GO:0032555;purine ribonucleotide binding;1.22795447276579e-13!GO:0017076;purine nucleotide binding;1.6848754972427e-13!GO:0006605;protein targeting;3.11420984672523e-13!GO:0043285;biopolymer catabolic process;3.69495901744487e-13!GO:0031988;membrane-bound vesicle;3.7803761916333e-13!GO:0048770;pigment granule;6.65232700667576e-13!GO:0042470;melanosome;6.65232700667576e-13!GO:0016607;nuclear speck;8.37677220437957e-13!GO:0009058;biosynthetic process;1.04803106151938e-12!GO:0016023;cytoplasmic membrane-bound vesicle;1.4904080150524e-12!GO:0008565;protein transporter activity;1.66973767892459e-12!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.03519561060914e-12!GO:0044249;cellular biosynthetic process;2.37947512393313e-12!GO:0022618;protein-RNA complex assembly;3.48406306645773e-12!GO:0051082;unfolded protein binding;4.05240709789152e-12!GO:0044455;mitochondrial membrane part;5.91944329253849e-12!GO:0045045;secretory pathway;6.25235293968474e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.18617922226406e-12!GO:0005746;mitochondrial respiratory chain;1.09597668238343e-11!GO:0030163;protein catabolic process;2.39002840065154e-11!GO:0043228;non-membrane-bound organelle;2.42512744841508e-11!GO:0043232;intracellular non-membrane-bound organelle;2.42512744841508e-11!GO:0050136;NADH dehydrogenase (quinone) activity;2.42512744841508e-11!GO:0003954;NADH dehydrogenase activity;2.42512744841508e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.42512744841508e-11!GO:0031965;nuclear membrane;3.5262361084703e-11!GO:0008135;translation factor activity, nucleic acid binding;4.58343822761654e-11!GO:0051169;nuclear transport;4.88540403843857e-11!GO:0009057;macromolecule catabolic process;5.30441160505097e-11!GO:0044445;cytosolic part;8.88228081386313e-11!GO:0048475;coated membrane;9.39036868540193e-11!GO:0030117;membrane coat;9.39036868540193e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;9.43104895401147e-11!GO:0000375;RNA splicing, via transesterification reactions;9.43104895401147e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.43104895401147e-11!GO:0006913;nucleocytoplasmic transport;1.79340592765171e-10!GO:0005635;nuclear envelope;2.58276895270803e-10!GO:0005730;nucleolus;2.99363639647285e-10!GO:0003712;transcription cofactor activity;3.31226270427585e-10!GO:0006259;DNA metabolic process;3.762299332772e-10!GO:0044431;Golgi apparatus part;4.27829443712608e-10!GO:0005783;endoplasmic reticulum;4.31258469621011e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.06629179051465e-10!GO:0008639;small protein conjugating enzyme activity;5.11727622146134e-10!GO:0004842;ubiquitin-protein ligase activity;6.06690504388942e-10!GO:0042775;organelle ATP synthesis coupled electron transport;9.53755812747499e-10!GO:0042773;ATP synthesis coupled electron transport;9.53755812747499e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.50646726983642e-09!GO:0045271;respiratory chain complex I;1.50646726983642e-09!GO:0005747;mitochondrial respiratory chain complex I;1.50646726983642e-09!GO:0031980;mitochondrial lumen;2.22273415921938e-09!GO:0005759;mitochondrial matrix;2.22273415921938e-09!GO:0005524;ATP binding;2.46706760078811e-09!GO:0032559;adenyl ribonucleotide binding;2.50201315530072e-09!GO:0019787;small conjugating protein ligase activity;3.04907080258765e-09!GO:0044248;cellular catabolic process;3.44010823148176e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.56777495828795e-09!GO:0030554;adenyl nucleotide binding;3.97426995099512e-09!GO:0050794;regulation of cellular process;4.55764263857636e-09!GO:0032940;secretion by cell;4.74918263282419e-09!GO:0016568;chromatin modification;5.64328178490471e-09!GO:0000502;proteasome complex (sensu Eukaryota);1.01858780684066e-08!GO:0006793;phosphorus metabolic process;1.0465533609309e-08!GO:0006796;phosphate metabolic process;1.0465533609309e-08!GO:0015935;small ribosomal subunit;1.1553540443829e-08!GO:0005768;endosome;1.16230757058226e-08!GO:0016887;ATPase activity;1.16230757058226e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.16420308421591e-08!GO:0019829;cation-transporting ATPase activity;1.3086189372884e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.32659304615918e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.52139968305773e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.68352994027011e-08!GO:0016564;transcription repressor activity;1.79139848345638e-08!GO:0006403;RNA localization;2.00474513950263e-08!GO:0030120;vesicle coat;2.03939799362116e-08!GO:0030662;coated vesicle membrane;2.03939799362116e-08!GO:0015986;ATP synthesis coupled proton transport;2.26099195804612e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.26099195804612e-08!GO:0005798;Golgi-associated vesicle;2.44655862579902e-08!GO:0050657;nucleic acid transport;2.44655862579902e-08!GO:0051236;establishment of RNA localization;2.44655862579902e-08!GO:0050658;RNA transport;2.44655862579902e-08!GO:0006446;regulation of translational initiation;3.32126941031319e-08!GO:0003743;translation initiation factor activity;3.95320197138591e-08!GO:0044432;endoplasmic reticulum part;5.70794971844086e-08!GO:0006461;protein complex assembly;5.86701603370258e-08!GO:0016881;acid-amino acid ligase activity;7.67654810146142e-08!GO:0019222;regulation of metabolic process;7.67654810146142e-08!GO:0004386;helicase activity;8.19452328141992e-08!GO:0005643;nuclear pore;8.89078708986981e-08!GO:0044453;nuclear membrane part;8.91330930408614e-08!GO:0015934;large ribosomal subunit;9.9591439883106e-08!GO:0050789;regulation of biological process;1.17729304563156e-07!GO:0006413;translational initiation;1.31700391057929e-07!GO:0042623;ATPase activity, coupled;1.3681046710722e-07!GO:0000139;Golgi membrane;2.77625481510671e-07!GO:0030135;coated vesicle;2.82588056784546e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;2.98059076152107e-07!GO:0006366;transcription from RNA polymerase II promoter;3.22383904933085e-07!GO:0019899;enzyme binding;5.30838000218608e-07!GO:0015630;microtubule cytoskeleton;6.01265313967409e-07!GO:0048523;negative regulation of cellular process;6.87418294509425e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.60620403636596e-07!GO:0030133;transport vesicle;7.99428815924991e-07!GO:0051028;mRNA transport;8.37157988336499e-07!GO:0006323;DNA packaging;9.94418618917461e-07!GO:0017038;protein import;1.22587681602808e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.28654612629597e-06!GO:0006754;ATP biosynthetic process;1.32673366253442e-06!GO:0006753;nucleoside phosphate metabolic process;1.32673366253442e-06!GO:0005793;ER-Golgi intermediate compartment;1.379338046755e-06!GO:0044440;endosomal part;1.53254816847958e-06!GO:0010008;endosome membrane;1.53254816847958e-06!GO:0003714;transcription corepressor activity;1.7286538565999e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.78421340101372e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.78421340101372e-06!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.90845121152063e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.09196628544378e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.22495113090104e-06!GO:0016310;phosphorylation;2.26875918603293e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.36213172360095e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.36213172360095e-06!GO:0006164;purine nucleotide biosynthetic process;2.60385468478429e-06!GO:0009152;purine ribonucleotide biosynthetic process;2.60385468478429e-06!GO:0003924;GTPase activity;2.65167994011738e-06!GO:0008026;ATP-dependent helicase activity;2.72114953525012e-06!GO:0006163;purine nucleotide metabolic process;3.27586528417151e-06!GO:0009150;purine ribonucleotide metabolic process;3.5753346662597e-06!GO:0006350;transcription;3.6018930767433e-06!GO:0000151;ubiquitin ligase complex;3.70946902541441e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.79176853767858e-06!GO:0009259;ribonucleotide metabolic process;3.99291328364909e-06!GO:0051186;cofactor metabolic process;4.88675626155062e-06!GO:0006613;cotranslational protein targeting to membrane;5.05876451777471e-06!GO:0005761;mitochondrial ribosome;5.11937613010751e-06!GO:0000313;organellar ribosome;5.11937613010751e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.00236264928662e-06!GO:0009144;purine nucleoside triphosphate metabolic process;6.00236264928662e-06!GO:0005770;late endosome;6.01179405848211e-06!GO:0031323;regulation of cellular metabolic process;6.13403887037691e-06!GO:0005525;GTP binding;6.25405088678477e-06!GO:0043566;structure-specific DNA binding;6.42937423746625e-06!GO:0015078;hydrogen ion transmembrane transporter activity;7.17851642735261e-06!GO:0009199;ribonucleoside triphosphate metabolic process;7.47432682173213e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.57167997573099e-06!GO:0046034;ATP metabolic process;7.61735725369168e-06!GO:0009141;nucleoside triphosphate metabolic process;7.7806062588587e-06!GO:0007264;small GTPase mediated signal transduction;8.92960264488769e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.3484112726025e-06!GO:0031252;leading edge;1.03543555918371e-05!GO:0009260;ribonucleotide biosynthetic process;1.0382519020559e-05!GO:0032446;protein modification by small protein conjugation;1.21241364617303e-05!GO:0005083;small GTPase regulator activity;1.22072863018233e-05!GO:0005789;endoplasmic reticulum membrane;1.22246872717073e-05!GO:0016044;membrane organization and biogenesis;1.39593496515011e-05!GO:0010468;regulation of gene expression;1.40065282541639e-05!GO:0046930;pore complex;1.45172597107455e-05!GO:0045333;cellular respiration;1.55655195671766e-05!GO:0000245;spliceosome assembly;1.65667898750429e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.65667898750429e-05!GO:0048471;perinuclear region of cytoplasm;1.86971612268153e-05!GO:0051170;nuclear import;1.97604394970028e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.12953590840746e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.12953590840746e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.12953590840746e-05!GO:0009060;aerobic respiration;2.47618385772039e-05!GO:0051276;chromosome organization and biogenesis;2.66013747750081e-05!GO:0006606;protein import into nucleus;2.72904302056962e-05!GO:0030118;clathrin coat;2.75381531630257e-05!GO:0045259;proton-transporting ATP synthase complex;2.76889342293943e-05!GO:0016567;protein ubiquitination;2.76889342293943e-05!GO:0048519;negative regulation of biological process;2.87274355349891e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.95903413477816e-05!GO:0065002;intracellular protein transport across a membrane;3.1395106977952e-05!GO:0006974;response to DNA damage stimulus;3.1395106977952e-05!GO:0032561;guanyl ribonucleotide binding;3.19004301709151e-05!GO:0019001;guanyl nucleotide binding;3.19004301709151e-05!GO:0006732;coenzyme metabolic process;3.38637009829809e-05!GO:0032774;RNA biosynthetic process;4.31218518821526e-05!GO:0043038;amino acid activation;4.41123728229042e-05!GO:0006418;tRNA aminoacylation for protein translation;4.41123728229042e-05!GO:0043039;tRNA aminoacylation;4.41123728229042e-05!GO:0030658;transport vesicle membrane;4.44804870215467e-05!GO:0008092;cytoskeletal protein binding;4.5725622793699e-05!GO:0006351;transcription, DNA-dependent;4.62587786676607e-05!GO:0051168;nuclear export;4.9526211242387e-05!GO:0009055;electron carrier activity;5.03026466236861e-05!GO:0030695;GTPase regulator activity;5.28017088553001e-05!GO:0012501;programmed cell death;5.94688564427918e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.08896133896245e-05!GO:0006612;protein targeting to membrane;6.19070010439032e-05!GO:0006915;apoptosis;7.08381079847269e-05!GO:0009892;negative regulation of metabolic process;7.32973905106031e-05!GO:0005773;vacuole;7.44891060894227e-05!GO:0031324;negative regulation of cellular metabolic process;7.76736233154079e-05!GO:0031072;heat shock protein binding;7.84760741376761e-05!GO:0003713;transcription coactivator activity;7.89015389791774e-05!GO:0065007;biological regulation;8.1795709017788e-05!GO:0003724;RNA helicase activity;8.1795709017788e-05!GO:0008270;zinc ion binding;0.00011447177104368!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000124548011843595!GO:0008219;cell death;0.000127208412558491!GO:0016265;death;0.000127208412558491!GO:0015631;tubulin binding;0.000140149683494708!GO:0006891;intra-Golgi vesicle-mediated transport;0.000153002182217575!GO:0016481;negative regulation of transcription;0.000163319530102331!GO:0006892;post-Golgi vesicle-mediated transport;0.000193917368178541!GO:0030660;Golgi-associated vesicle membrane;0.000194372536669847!GO:0006399;tRNA metabolic process;0.000201329811416136!GO:0045449;regulation of transcription;0.000210403950175616!GO:0043069;negative regulation of programmed cell death;0.000210541832444437!GO:0051188;cofactor biosynthetic process;0.000217710994470938!GO:0009056;catabolic process;0.000221891608588847!GO:0008654;phospholipid biosynthetic process;0.000237864327102645!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000237864327102645!GO:0015399;primary active transmembrane transporter activity;0.000237864327102645!GO:0022406;membrane docking;0.000237864327102645!GO:0048278;vesicle docking;0.000237864327102645!GO:0005769;early endosome;0.000242093233685306!GO:0005874;microtubule;0.000248587084771576!GO:0003697;single-stranded DNA binding;0.000262152705161325!GO:0008287;protein serine/threonine phosphatase complex;0.000279815119998492!GO:0043066;negative regulation of apoptosis;0.000282938721999188!GO:0006281;DNA repair;0.00028469689111163!GO:0009108;coenzyme biosynthetic process;0.00032591760609516!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000339259146481225!GO:0042254;ribosome biogenesis and assembly;0.000345223373694209!GO:0006897;endocytosis;0.000351218880607967!GO:0010324;membrane invagination;0.000351218880607967!GO:0016740;transferase activity;0.00036372065824185!GO:0005813;centrosome;0.000371422356622801!GO:0006904;vesicle docking during exocytosis;0.000390067838337306!GO:0006402;mRNA catabolic process;0.000396259646366254!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000403424780477982!GO:0005667;transcription factor complex;0.000406779994326859!GO:0006355;regulation of transcription, DNA-dependent;0.000409636582376555!GO:0006916;anti-apoptosis;0.000416494465570943!GO:0006099;tricarboxylic acid cycle;0.00043296664800604!GO:0046356;acetyl-CoA catabolic process;0.00043296664800604!GO:0003729;mRNA binding;0.00043867127752474!GO:0043623;cellular protein complex assembly;0.000451215228342216!GO:0051246;regulation of protein metabolic process;0.000460935315738762!GO:0030134;ER to Golgi transport vesicle;0.000492623632119629!GO:0004674;protein serine/threonine kinase activity;0.000515085752781323!GO:0030137;COPI-coated vesicle;0.000572109564729074!GO:0030532;small nuclear ribonucleoprotein complex;0.000632577212023684!GO:0051789;response to protein stimulus;0.000644239604230774!GO:0006986;response to unfolded protein;0.000644239604230774!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000649966931528353!GO:0030867;rough endoplasmic reticulum membrane;0.000681406495199194!GO:0016859;cis-trans isomerase activity;0.000683704350633412!GO:0000323;lytic vacuole;0.000687926405127034!GO:0005764;lysosome;0.000687926405127034!GO:0048500;signal recognition particle;0.000698975952948563!GO:0008250;oligosaccharyl transferase complex;0.000749876471912133!GO:0006752;group transfer coenzyme metabolic process;0.000761644441692351!GO:0008017;microtubule binding;0.000777112606816451!GO:0043492;ATPase activity, coupled to movement of substances;0.000784265343192941!GO:0030127;COPII vesicle coat;0.000811462813032092!GO:0012507;ER to Golgi transport vesicle membrane;0.000811462813032092!GO:0051427;hormone receptor binding;0.000860393219980321!GO:0003690;double-stranded DNA binding;0.000870211331415597!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000870848902981517!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000938785721821888!GO:0016363;nuclear matrix;0.000971823460478051!GO:0005815;microtubule organizing center;0.00106891014824091!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00110919694457123!GO:0016197;endosome transport;0.0011497201351024!GO:0030036;actin cytoskeleton organization and biogenesis;0.00134197418280361!GO:0006084;acetyl-CoA metabolic process;0.00135554098306661!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00150473305859057!GO:0005905;coated pit;0.00153496699786547!GO:0019783;small conjugating protein-specific protease activity;0.00154903261057638!GO:0035257;nuclear hormone receptor binding;0.00155766705987564!GO:0016791;phosphoric monoester hydrolase activity;0.0016208633787887!GO:0009109;coenzyme catabolic process;0.00172410393127629!GO:0043021;ribonucleoprotein binding;0.00173768147549505!GO:0051920;peroxiredoxin activity;0.00178147324904463!GO:0016301;kinase activity;0.00180846297761559!GO:0004576;oligosaccharyl transferase activity;0.00183533148963214!GO:0045786;negative regulation of progression through cell cycle;0.00185750937543908!GO:0005774;vacuolar membrane;0.0018889583882688!GO:0031628;opioid receptor binding;0.00189323289745006!GO:0031852;mu-type opioid receptor binding;0.00189323289745006!GO:0006607;NLS-bearing substrate import into nucleus;0.0019089263558309!GO:0004221;ubiquitin thiolesterase activity;0.00191877387124003!GO:0016563;transcription activator activity;0.0019362789530608!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00193873338745324!GO:0045047;protein targeting to ER;0.00193873338745324!GO:0030663;COPI coated vesicle membrane;0.00193873338745324!GO:0030126;COPI vesicle coat;0.00193873338745324!GO:0009719;response to endogenous stimulus;0.0019651851404863!GO:0005788;endoplasmic reticulum lumen;0.0019651851404863!GO:0008186;RNA-dependent ATPase activity;0.00200888712665401!GO:0005048;signal sequence binding;0.00200888712665401!GO:0004843;ubiquitin-specific protease activity;0.00201622293542156!GO:0000059;protein import into nucleus, docking;0.00214022439631237!GO:0005839;proteasome core complex (sensu Eukaryota);0.00226184114327584!GO:0004721;phosphoprotein phosphatase activity;0.00235581826274998!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00238225436008031!GO:0033673;negative regulation of kinase activity;0.00242737334278842!GO:0006469;negative regulation of protein kinase activity;0.00242737334278842!GO:0046914;transition metal ion binding;0.00246146568189116!GO:0012506;vesicle membrane;0.0026251990631223!GO:0045892;negative regulation of transcription, DNA-dependent;0.00268970100493529!GO:0051087;chaperone binding;0.00284878081366971!GO:0051128;regulation of cellular component organization and biogenesis;0.00326311914413904!GO:0007049;cell cycle;0.00340228859402976!GO:0004298;threonine endopeptidase activity;0.00367933191506089!GO:0030119;AP-type membrane coat adaptor complex;0.00391443848186066!GO:0030027;lamellipodium;0.00396057290775303!GO:0008312;7S RNA binding;0.00403966791588732!GO:0006414;translational elongation;0.004068757431054!GO:0031902;late endosome membrane;0.00413102699274759!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00413102699274759!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00413102699274759!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00413102699274759!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00414984182875751!GO:0016311;dephosphorylation;0.00428721767321013!GO:0030384;phosphoinositide metabolic process;0.00461438590211838!GO:0006383;transcription from RNA polymerase III promoter;0.00464555990577232!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0047840431976712!GO:0031124;mRNA 3'-end processing;0.0047840431976712!GO:0006401;RNA catabolic process;0.00482189913761389!GO:0051187;cofactor catabolic process;0.00503929103947522!GO:0008047;enzyme activator activity;0.00514115284602426!GO:0022890;inorganic cation transmembrane transporter activity;0.00528555163572491!GO:0044433;cytoplasmic vesicle part;0.00529863109493336!GO:0005791;rough endoplasmic reticulum;0.00542411036111326!GO:0030029;actin filament-based process;0.00558115555776718!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00558115555776718!GO:0030131;clathrin adaptor complex;0.00570122249736868!GO:0004004;ATP-dependent RNA helicase activity;0.0057020692526453!GO:0046489;phosphoinositide biosynthetic process;0.00596596748337835!GO:0030136;clathrin-coated vesicle;0.00629870319997365!GO:0008601;protein phosphatase type 2A regulator activity;0.00635980423082433!GO:0005096;GTPase activator activity;0.00654029792398648!GO:0007265;Ras protein signal transduction;0.00657127501601661!GO:0043087;regulation of GTPase activity;0.00683500467884124!GO:0016050;vesicle organization and biogenesis;0.00711048127937313!GO:0044437;vacuolar part;0.00743831804110937!GO:0050811;GABA receptor binding;0.00747704632094317!GO:0031123;RNA 3'-end processing;0.00751650571935102!GO:0005765;lysosomal membrane;0.00786905933306972!GO:0006611;protein export from nucleus;0.00788371689241154!GO:0008286;insulin receptor signaling pathway;0.00792805512199181!GO:0016072;rRNA metabolic process;0.00797584739025476!GO:0048489;synaptic vesicle transport;0.00801760098197278!GO:0005875;microtubule associated complex;0.00814734087565609!GO:0008361;regulation of cell size;0.00818111138959761!GO:0030140;trans-Golgi network transport vesicle;0.00846374838482938!GO:0003711;transcription elongation regulator activity;0.00852380114222904!GO:0030659;cytoplasmic vesicle membrane;0.00858326060276845!GO:0051348;negative regulation of transferase activity;0.00862871618091476!GO:0006405;RNA export from nucleus;0.00873347333408707!GO:0006364;rRNA processing;0.00874093215487062!GO:0046903;secretion;0.00876051494142305!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00885583964676566!GO:0003702;RNA polymerase II transcription factor activity;0.00904665185243875!GO:0046467;membrane lipid biosynthetic process;0.00904665185243875!GO:0018196;peptidyl-asparagine modification;0.00904814722128529!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00904814722128529!GO:0000209;protein polyubiquitination;0.00925608055109723!GO:0030521;androgen receptor signaling pathway;0.00927234774605752!GO:0015980;energy derivation by oxidation of organic compounds;0.00966504513945286!GO:0007010;cytoskeleton organization and biogenesis;0.00997476834327249!GO:0051252;regulation of RNA metabolic process;0.0104135797287704!GO:0004860;protein kinase inhibitor activity;0.0104661643930603!GO:0016790;thiolester hydrolase activity;0.0104661643930603!GO:0000118;histone deacetylase complex;0.0106178362033598!GO:0042026;protein refolding;0.0107180647406892!GO:0031625;ubiquitin protein ligase binding;0.0107455962020264!GO:0008139;nuclear localization sequence binding;0.0113020382027971!GO:0000159;protein phosphatase type 2A complex;0.0116626125648292!GO:0035258;steroid hormone receptor binding;0.0120332695337319!GO:0030518;steroid hormone receptor signaling pathway;0.0120332695337319!GO:0019887;protein kinase regulator activity;0.0120332695337319!GO:0030125;clathrin vesicle coat;0.0122556446156341!GO:0030665;clathrin coated vesicle membrane;0.0122556446156341!GO:0016251;general RNA polymerase II transcription factor activity;0.0122556446156341!GO:0006810;transport;0.0122556446156341!GO:0033116;ER-Golgi intermediate compartment membrane;0.0122749318038551!GO:0006470;protein amino acid dephosphorylation;0.0124372970240874!GO:0006650;glycerophospholipid metabolic process;0.0124784913570612!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0125451263602789!GO:0006818;hydrogen transport;0.0128725309753973!GO:0016049;cell growth;0.013018553817514!GO:0007243;protein kinase cascade;0.0132549808389513!GO:0005869;dynactin complex;0.0145670812947311!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0151285092259004!GO:0016779;nucleotidyltransferase activity;0.0151285092259004!GO:0008154;actin polymerization and/or depolymerization;0.0151285092259004!GO:0015992;proton transport;0.015492882312795!GO:0005099;Ras GTPase activator activity;0.0157078799850531!GO:0001558;regulation of cell growth;0.0157788861090481!GO:0000049;tRNA binding;0.0160035175162623!GO:0007004;telomere maintenance via telomerase;0.0160919227202456!GO:0001726;ruffle;0.0160919227202456!GO:0016853;isomerase activity;0.0162405342762562!GO:0046474;glycerophospholipid biosynthetic process;0.0163770413247429!GO:0006352;transcription initiation;0.0165712713367437!GO:0006378;mRNA polyadenylation;0.016652998687649!GO:0003746;translation elongation factor activity;0.0167084771985252!GO:0016585;chromatin remodeling complex;0.0175316218987598!GO:0007030;Golgi organization and biogenesis;0.0175316218987598!GO:0007242;intracellular signaling cascade;0.0178597661465101!GO:0048487;beta-tubulin binding;0.0181964949368129!GO:0043067;regulation of programmed cell death;0.0184306474075642!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0184306474075642!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0184306474075642!GO:0005868;cytoplasmic dynein complex;0.0186098978049297!GO:0016615;malate dehydrogenase activity;0.0187575364671829!GO:0000314;organellar small ribosomal subunit;0.0195255155783465!GO:0005763;mitochondrial small ribosomal subunit;0.0195255155783465!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0198583087008857!GO:0008022;protein C-terminus binding;0.020079080383232!GO:0005885;Arp2/3 protein complex;0.0201074180104843!GO:0006376;mRNA splice site selection;0.0201351699757764!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0201351699757764!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0202954319545124!GO:0042981;regulation of apoptosis;0.0209200485220303!GO:0004722;protein serine/threonine phosphatase activity;0.0211651510236424!GO:0045893;positive regulation of transcription, DNA-dependent;0.0212823279521543!GO:0006333;chromatin assembly or disassembly;0.0221106142206543!GO:0031901;early endosome membrane;0.0231251609540458!GO:0030132;clathrin coat of coated pit;0.0235752271086402!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0240001414204176!GO:0032200;telomere organization and biogenesis;0.0240001414204176!GO:0000723;telomere maintenance;0.0240001414204176!GO:0008234;cysteine-type peptidase activity;0.0246781206090654!GO:0006338;chromatin remodeling;0.0252858844184725!GO:0047485;protein N-terminus binding;0.0260905517151797!GO:0051726;regulation of cell cycle;0.0263968370260147!GO:0003779;actin binding;0.026485279742408!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0266909229677342!GO:0007005;mitochondrion organization and biogenesis;0.0267250397100215!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0267819554217399!GO:0008097;5S rRNA binding;0.0273361906244995!GO:0000074;regulation of progression through cell cycle;0.0275605840118982!GO:0000781;chromosome, telomeric region;0.0284803952721239!GO:0050681;androgen receptor binding;0.0285319086875369!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0300161863344031!GO:0005938;cell cortex;0.0308408896298291!GO:0008180;signalosome;0.0314286263745045!GO:0019207;kinase regulator activity;0.032040315318114!GO:0006661;phosphatidylinositol biosynthetic process;0.0322519276241088!GO:0030880;RNA polymerase complex;0.0323576548215432!GO:0030176;integral to endoplasmic reticulum membrane;0.0325932366588054!GO:0031461;cullin-RING ubiquitin ligase complex;0.0329425120364627!GO:0051056;regulation of small GTPase mediated signal transduction;0.0334471642611802!GO:0035035;histone acetyltransferase binding;0.0352511456717054!GO:0000287;magnesium ion binding;0.0358384886304074!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0362596204559926!GO:0015002;heme-copper terminal oxidase activity;0.0362596204559926!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0362596204559926!GO:0004129;cytochrome-c oxidase activity;0.0362596204559926!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0366311092315464!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0366311092315464!GO:0012510;trans-Golgi network transport vesicle membrane;0.0366311092315464!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0391200419199763!GO:0006595;polyamine metabolic process;0.0397119020798086!GO:0043631;RNA polyadenylation;0.0402823018941549!GO:0009117;nucleotide metabolic process;0.0409594322397387!GO:0005802;trans-Golgi network;0.0414349207783024!GO:0035034;histone acetyltransferase regulator activity;0.0417307988758582!GO:0006108;malate metabolic process;0.0419410815426076!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0420632145056206!GO:0043488;regulation of mRNA stability;0.0420632145056206!GO:0043487;regulation of RNA stability;0.0420632145056206!GO:0006984;ER-nuclear signaling pathway;0.0421367326894795!GO:0019902;phosphatase binding;0.042236780664525!GO:0004726;non-membrane spanning protein tyrosine phosphatase activity;0.0422510294159883!GO:0005832;chaperonin-containing T-complex;0.0427027536970117!GO:0007034;vacuolar transport;0.0427863887483829!GO:0019210;kinase inhibitor activity;0.042812345543733!GO:0005741;mitochondrial outer membrane;0.0430339331493354!GO:0030569;chymotrypsin inhibitor activity;0.0433600596336351!GO:0016579;protein deubiquitination;0.0442057421610641!GO:0019208;phosphatase regulator activity;0.0442513286831624!GO:0048245;eosinophil chemotaxis;0.0442598655586495!GO:0005784;translocon complex;0.0475748904085957!GO:0030427;site of polarized growth;0.048174905173427!GO:0065009;regulation of a molecular function;0.0493107870737761!GO:0019867;outer membrane;0.0495356232713268
 |sample_id=10162
 |sample_note=
@@ Line 75: / Line 106: @@
 |sample_tissue=pituitary gland
 |top_motifs=RFX1:4.19776464054;RFX2..5_RFXANK_RFXAP:3.5258729533;LHX3,4:3.44218604781;ATF2:2.48305908955;NRF1:2.42412860908;ALX1:2.36819892382;ADNP_IRX_SIX_ZHX:2.31016720269;POU6F1:2.30774181909;AR:2.26839030252;FOXN1:2.23053685045;EP300:2.08648735129;MYFfamily:2.03147426236;FOXA2:1.94342339771;CREB1:1.85885506737;BPTF:1.8250787278;SNAI1..3:1.81789748263;TGIF1:1.81089332277;MYOD1:1.7878814861;ZFP161:1.78374134683;RREB1:1.72484481075;SREBF1,2:1.7086591407;REST:1.69178027124;ZEB1:1.67449019795;AHR_ARNT_ARNT2:1.6452377327;NANOG:1.61597593622;STAT1,3:1.6081738014;NKX6-1,2:1.59141924462;MED-1{core}:1.58179065344;PATZ1:1.55766681603;NHLH1,2:1.54901915592;SP1:1.44912535686;EGR1..3:1.42286518983;PRRX1,2:1.40937139936;FOX{D1,D2}:1.36775213186;LMO2:1.36370650337;FOXP3:1.3283983904;TLX2:1.32415432106;GTF2I:1.30320250205;ZNF143:1.28074466542;ARID5B:1.26322847772;HIC1:1.25489641257;POU1F1:1.24864706749;ATF6:1.23352079877;CUX2:1.19741444941;PRDM1:1.18091855401;MAZ:1.16289940147;MAFB:1.14494457474;AIRE:1.13994408967;NKX2-3_NKX2-5:1.13684645163;PAX1,9:1.13146715588;TFAP2B:1.07799087232;ELK1,4_GABP{A,B1}:1.07075663217;ONECUT1,2:1.05849601425;CDC5L:1.05688915802;JUN:1.01294047918;NR3C1:1.01198833099;TEF:0.992872871975;GFI1B:0.986067786944;FOX{F1,F2,J1}:0.980424336691;DBP:0.977188011038;HMGA1,2:0.975671419662;FOXP1:0.951525350753;STAT2,4,6:0.938822928613;ATF4:0.898195236811;PAX5:0.888294013416;MTE{core}:0.887558223208;NFIX:0.886968442856;HOXA9_MEIS1:0.874400046243;GFI1:0.866600191378;HAND1,2:0.826701646213;MTF1:0.804527440358;CRX:0.801139345105;ATF5_CREB3:0.782812812148;NFIL3:0.776344853776;RBPJ:0.7671449542;HOX{A6,A7,B6,B7}:0.761746008217;IRF7:0.754847916541;MZF1:0.754789512619;TBX4,5:0.742297123444;HMX1:0.73791196237;FOXM1:0.723479530846;YY1:0.721969231518;PAX4:0.702462851869;PAX6:0.65626357528;BREu{core}:0.612104826478;FOXO1,3,4:0.593223109453;RORA:0.55150987268;GCM1,2:0.544755470338;SPZ1:0.497139265905;GATA4:0.462966108142;OCT4_SOX2{dimer}:0.45147888455;TOPORS:0.448202725741;ZBTB6:0.427439610897;NKX3-2:0.425626007747;SOX5:0.401049471521;LEF1_TCF7_TCF7L1,2:0.393049097562;MEF2{A,B,C,D}:0.363635396918;HOX{A4,D4}:0.356867019237;PITX1..3:0.354910184522;SOX2:0.326368282286;HIF1A:0.326048965088;KLF4:0.325218167555;ESRRA:0.296115052754;PDX1:0.282460415837;SMAD1..7,9:0.272044939565;SOX17:0.26990572057;EBF1:0.246986415676;NFY{A,B,C}:0.228405945952;XBP1:0.19771960532;FOX{I1,J2}:0.19287405977;PBX1:0.185779140846;SOX{8,9,10}:0.174030285654;EVI1:0.1308153706;GATA6:0.095960534246;ZBTB16:0.0825689927034;PAX3,7:0.050387054947;XCPE1{core}:0.0469331354433;MYBL2:0.00772277412966;HSF1,2:0.00472387335429;VSX1,2:-0.0112809498212;PAX2:-0.0198590512451;IRF1,2:-0.0254755794902;ZIC1..3:-0.0400853743097;SPIB:-0.0937819243843;ELF1,2,4:-0.101359289924;CEBPA,B_DDIT3:-0.118598521573;NKX3-1:-0.142374508188;POU5F1:-0.17120523534;TLX1..3_NFIC{dimer}:-0.190958817436;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.191944236217;FOXD3:-0.201880791747;NR1H4:-0.216082958012;TBP:-0.216287575132;NKX2-1,4:-0.217383837208;NANOG{mouse}:-0.257351614542;FOXQ1:-0.307100917248;ZNF384:-0.30774256788;TFAP4:-0.319392138356;POU3F1..4:-0.323509121772;TEAD1:-0.350071495581;NFATC1..3:-0.366733131372;ZNF423:-0.376489850691;IKZF2:-0.399065131378;TP53:-0.414458283865;SPI1:-0.425795873855;ETS1,2:-0.434480652156;NFE2:-0.452295117574;FOSL2:-0.465380323363;HNF1A:-0.468678388102;HBP1_HMGB_SSRP1_UBTF:-0.473180220019;TFAP2{A,C}:-0.491778746716;GTF2A1,2:-0.495929833049;NFE2L1:-0.530422117989;TFDP1:-0.553565248168;DMAP1_NCOR{1,2}_SMARC:-0.578930671012;ZNF238:-0.581511876962;HLF:-0.590071247452;STAT5{A,B}:-0.59416079484;TFCP2:-0.599017872167;RXRA_VDR{dimer}:-0.634842694747;FOXL1:-0.644709697158;TAL1_TCF{3,4,12}:-0.663167349707;FOS_FOS{B,L1}_JUN{B,D}:-0.688440449516;MYB:-0.698047289723;CDX1,2,4:-0.717912589792;NFE2L2:-0.719668342828;BACH2:-0.757257749415;NFKB1_REL_RELA:-0.757452904877;NR5A1,2:-0.789718750366;GZF1:-0.810458688848;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.818546242106;HNF4A_NR2F1,2:-0.882048884641;GLI1..3:-0.893559889223;IKZF1:-0.927640604146;T:-0.940091583921;bHLH_family:-0.962538793259;RUNX1..3:-0.981256120193;E2F1..5:-1.03006717232;POU2F1..3:-1.05733605719;PAX8:-1.06775628883;ALX4:-1.11365099795;UFEwm:-1.14507201328;PPARG:-1.31722164101;NR6A1:-1.36910131333;HOX{A5,B5}:-1.39263024146;ESR1:-1.43423291323;SRF:-1.48417953779;RXR{A,B,G}:-1.74176365674;EN1,2:-1.74543092557;ZNF148:-1.80789673924;NKX2-2,8:-2.23799471148;HES1:-2.58476028233
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10162-103A9;search_select_hide=table117:FF:10162-103A9
 }}

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FF:10162-103A9: Difference between revisions

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Latest revision as of 12:23, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0