FF:10180-103C9: Difference between revisions

Latest revision as of 12:25, 3 June 2020

Name:	pituitary gland - adult, donor10196
Species:	Human (Homo sapiens)
Library ID:	CNhs13805
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	pituitary gland
dev stage	NA
sex	female
age	60
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005584

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13805		CAGE		DRX008708		DRR009580

Accession ID Hg19

Library id		BAM		CTSS
CNhs13805		DRZ001005		DRZ002390

Accession ID Hg38

Library id		BAM		CTSS
CNhs13805		DRZ012355		DRZ013740

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.177
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.402
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.345
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0.849
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	1.551
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.206
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.263
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.327
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0303
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.166
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.932
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.138
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.768
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0515
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.206
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0279
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.352
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.206
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.663
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0538
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.345
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13805

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00555
MA0003.1	MA0003.1	0.215
MA0004.1	MA0004.1	0.282
MA0006.1	MA0006.1	0.293
MA0007.1	MA0007.1	0.604
MA0009.1	MA0009.1	0.672
MA0014.1	MA0014.1	0.927
MA0017.1	MA0017.1	0.0256
MA0018.2	MA0018.2	2.49177e-4
MA0019.1	MA0019.1	0.729
MA0024.1	MA0024.1	0.292
MA0025.1	MA0025.1	0.666
MA0027.1	MA0027.1	0.193
MA0028.1	MA0028.1	0.494
MA0029.1	MA0029.1	0.223
MA0030.1	MA0030.1	0.0561
MA0031.1	MA0031.1	0.944
MA0035.2	MA0035.2	0.0619
MA0038.1	MA0038.1	0.867
MA0039.2	MA0039.2	0.287
MA0040.1	MA0040.1	0.918
MA0041.1	MA0041.1	0.471
MA0042.1	MA0042.1	0.425
MA0043.1	MA0043.1	0.00744
MA0046.1	MA0046.1	0.192
MA0047.2	MA0047.2	0.192
MA0048.1	MA0048.1	0.0365
MA0050.1	MA0050.1	0.033
MA0051.1	MA0051.1	0.232
MA0052.1	MA0052.1	0.582
MA0055.1	MA0055.1	0.0312
MA0057.1	MA0057.1	0.362
MA0058.1	MA0058.1	0.287
MA0059.1	MA0059.1	0.0634
MA0060.1	MA0060.1	0.456
MA0061.1	MA0061.1	0.00122
MA0062.2	MA0062.2	0.899
MA0065.2	MA0065.2	1.68275e-4
MA0066.1	MA0066.1	0.0862
MA0067.1	MA0067.1	0.851
MA0068.1	MA0068.1	0.0872
MA0069.1	MA0069.1	0.77
MA0070.1	MA0070.1	0.745
MA0071.1	MA0071.1	0.0911
MA0072.1	MA0072.1	0.462
MA0073.1	MA0073.1	0.451
MA0074.1	MA0074.1	0.0612
MA0076.1	MA0076.1	0.0939
MA0077.1	MA0077.1	0.823
MA0078.1	MA0078.1	0.191
MA0079.2	MA0079.2	0.545
MA0080.2	MA0080.2	3.17484e-10
MA0081.1	MA0081.1	0.105
MA0083.1	MA0083.1	6.04598e-4
MA0084.1	MA0084.1	0.498
MA0087.1	MA0087.1	0.432
MA0088.1	MA0088.1	0.542
MA0090.1	MA0090.1	0.723
MA0091.1	MA0091.1	0.694
MA0092.1	MA0092.1	0.233
MA0093.1	MA0093.1	0.301
MA0099.2	MA0099.2	2.94101e-15
MA0100.1	MA0100.1	0.563
MA0101.1	MA0101.1	7.89905e-4
MA0102.2	MA0102.2	0.579
MA0103.1	MA0103.1	0.144
MA0104.2	MA0104.2	0.305
MA0105.1	MA0105.1	0.00216
MA0106.1	MA0106.1	0.0344
MA0107.1	MA0107.1	3.35378e-4
MA0108.2	MA0108.2	0.497
MA0111.1	MA0111.1	0.792
MA0112.2	MA0112.2	5.51689e-4
MA0113.1	MA0113.1	0.901
MA0114.1	MA0114.1	0.00574
MA0115.1	MA0115.1	0.801
MA0116.1	MA0116.1	0.0108
MA0117.1	MA0117.1	0.53
MA0119.1	MA0119.1	0.0209
MA0122.1	MA0122.1	0.281
MA0124.1	MA0124.1	0.87
MA0125.1	MA0125.1	0.326
MA0131.1	MA0131.1	0.89
MA0135.1	MA0135.1	0.0252
MA0136.1	MA0136.1	2.57381e-6
MA0137.2	MA0137.2	0.175
MA0138.2	MA0138.2	0.0485
MA0139.1	MA0139.1	0.473
MA0140.1	MA0140.1	0.00346
MA0141.1	MA0141.1	0.0271
MA0142.1	MA0142.1	0.868
MA0143.1	MA0143.1	0.437
MA0144.1	MA0144.1	0.673
MA0145.1	MA0145.1	0.0998
MA0146.1	MA0146.1	0.00886
MA0147.1	MA0147.1	0.219
MA0148.1	MA0148.1	0.131
MA0149.1	MA0149.1	0.0391
MA0150.1	MA0150.1	0.00758
MA0152.1	MA0152.1	0.739
MA0153.1	MA0153.1	0.766
MA0154.1	MA0154.1	0.0106
MA0155.1	MA0155.1	0.455
MA0156.1	MA0156.1	0.00258
MA0157.1	MA0157.1	0.229
MA0159.1	MA0159.1	0.258
MA0160.1	MA0160.1	0.0482
MA0162.1	MA0162.1	0.0605
MA0163.1	MA0163.1	3.48736e-5
MA0164.1	MA0164.1	0.487
MA0258.1	MA0258.1	0.00552
MA0259.1	MA0259.1	0.755

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13805

Novel motif	Logo	P-value
1	1	0.142
10	10	0.0569
100	100	0.545
101	101	0.765
102	102	0.922
103	103	0.123
104	104	0.382
105	105	0.419
106	106	3.98295e-4
107	107	0.0147
108	108	0.733
109	109	0.025
11	11	0.0428
110	110	0.137
111	111	0.188
112	112	0.778
113	113	0.361
114	114	0.247
115	115	0.964
116	116	0.0836
117	117	0.0806
118	118	0.268
119	119	0.129
12	12	0.982
120	120	0.162
121	121	0.735
122	122	0.592
123	123	0.466
124	124	0.925
125	125	0.26
126	126	0.19
127	127	0.357
128	128	0.0444
129	129	0.229
13	13	0.00818
130	130	0.103
131	131	0.167
132	132	0.777
133	133	0.0114
134	134	0.558
135	135	0.042
136	136	0.167
137	137	0.0181
138	138	0.759
139	139	0.683
14	14	0.996
140	140	0.742
141	141	0.955
142	142	0.934
143	143	0.0604
144	144	0.564
145	145	0.0913
146	146	0.221
147	147	0.802
148	148	0.0446
149	149	0.204
15	15	0.13
150	150	0.132
151	151	0.465
152	152	0.0246
153	153	0.852
154	154	0.914
155	155	0.755
156	156	0.464
157	157	0.326
158	158	0.0501
159	159	0.0149
16	16	0.163
160	160	0.0353
161	161	0.39
162	162	0.836
163	163	0.833
164	164	0.189
165	165	0.21
166	166	0.752
167	167	0.763
168	168	0.0597
169	169	0.00402
17	17	0.0648
18	18	0.11
19	19	0.139
2	2	0.517
20	20	0.747
21	21	0.0382
22	22	0.0493
23	23	0.0271
24	24	0.0678
25	25	0.699
26	26	0.0012
27	27	0.559
28	28	0.737
29	29	0.049
3	3	0.117
30	30	0.894
31	31	0.862
32	32	0.018
33	33	0.109
34	34	0.374
35	35	0.774
36	36	0.216
37	37	0.101
38	38	0.158
39	39	0.13
4	4	0.922
40	40	0.103
41	41	0.257
42	42	0.493
43	43	0.0913
44	44	0.262
45	45	0.455
46	46	0.0734
47	47	0.199
48	48	0.103
49	49	0.121
5	5	0.345
50	50	0.203
51	51	0.347
52	52	0.112
53	53	0.565
54	54	0.351
55	55	0.616
56	56	0.693
57	57	0.27
58	58	0.629
59	59	0.0184
6	6	0.409
60	60	0.0167
61	61	0.207
62	62	0.157
63	63	0.0394
64	64	0.272
65	65	0.0604
66	66	0.142
67	67	0.46
68	68	0.391
69	69	0.284
7	7	0.121
70	70	0.206
71	71	0.0426
72	72	0.956
73	73	0.0524
74	74	0.598
75	75	0.0997
76	76	0.769
77	77	0.0971
78	78	0.0228
79	79	0.71
8	8	0.0573
80	80	0.716
81	81	0.32
82	82	0.56
83	83	0.0457
84	84	0.366
85	85	0.165
86	86	0.218
87	87	5.59295e-4
88	88	0.41
89	89	0.579
9	9	0.239
90	90	0.344
91	91	0.639
92	92	0.761
93	93	0.534
94	94	0.284
95	95	0.11
96	96	0.496
97	97	0.842
98	98	0.601
99	99	0.281

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13805

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010162 human pituitary gland - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000007 (pituitary gland)
0001894 (diencephalon)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0003296 (gland of diencephalon)
0010133 (neuroendocrine gland)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001890 (forebrain)
0000949 (endocrine system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010162 (human pituitary gland - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000007,UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000949,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001890,UBERON:0001894,UBERON:0002050,UBERON:0002346,UBERON:0002368,UBERON:0002530,UBERON:0002532,UBERON:0002616,UBERON:0002780,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0003296,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
+|DRA_sample_Accession=CAGE@SAMD00005584
+|accession_numbers=CAGE;DRX008708;DRR009580;DRZ001005;DRZ002390;DRZ012355;DRZ013740
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000007,UBERON:0001894,UBERON:0000479,UBERON:0004121,UBERON:0003296,UBERON:0010133,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0002616,UBERON:0002780,UBERON:0002530,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001890,UBERON:0000949
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010162
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr3:87325728..87325739,-!p1@POU1F1!2.39!245.21!POU1F1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.39!244.00!PEG3;;chr9:114287433..114287513,+!p1@ZNF483!2.07!290.13!ZNF483;;chr5:134369879..134369898,-!p2@PITX1!1.75!55.23!PITX1;;chr19:46801639..46801699,+!p1@HIF3A!1.66!44.31!HIF3A;;chr3:87325636..87325643,-!p2@POU1F1!1.65!43.70!POU1F1;;chr7:63505799..63505904,+!p1@ZNF727!1.63!41.88!ZNF727;;chr12:55413751..55413765,+!p1@NEUROD4!1.63!41.27!NEUROD4;;chr5:134369905..134369972,-!p1@PITX1!1.61!59.48!PITX1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!1.59!78.91!ZNF395;;chr11:113930425..113930471,+!p1@ZBTB16!1.58!52.20!ZBTB16;;chr1:214161272..214161322,+!p1@PROX1!1.58!50.99!PROX1;;chr19:38085768..38085821,+!p1@ZNF540!1.56!51.59!ZNF540;;chr3:114477881..114477914,-!p17@ZBTB20!1.53!32.78!ZBTB20;;chr1:165414325..165414369,-!p1@RXRG!1.51!31.56!RXRG;;chr20:20348740..20348757,+!p1@INSM1!1.50!30.35!INSM1;;chr10:35484053..35484076,+!p1@CREM!1.49!72.23!CREM;;chr13:72441315..72441454,-!p1@DACH1!1.49!58.27!DACH1;;chr2:166326200..166326216,+!p1@CSRNP3!1.48!41.88!CSRNP3;;chr14:60975883..60975911,+!p1@SIX6!1.45!27.31!SIX6;;chr19:54041669..54041697,+!p2@ZNF331!1.45!27.31!ZNF331;;chr4:81118647..81118666,+!p1@PRDM8!1.44!35.20!PRDM8;;chr17:53342311..53342400,+!p1@HLF!1.40!27.31!HLF;;chr3:181429704..181429722,+!p1@SOX2!1.40!24.28!SOX2;;chr2:2334997..2335053,-!p1@MYT1L!1.35!21.24!MYT1L;;chr14:60975858..60975869,+!p2@SIX6!1.35!21.24!SIX6;;chr2:45168834..45168847,+!p2@SIX3!1.30!18.82!SIX3;;chr19:54058073..54058088,+!p1@ZNF331!1.30!18.82!ZNF331;;chr8:53166899..53166914,-!p3@ST18!1.27!17.60!ST18;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.27!17.60!ZBED1;;chr14:61116183..61116208,-!p1@SIX1!1.26!64.95!SIX1;;chr11:16629261..16629284,-!p1@SOX6!1.22!15.78!SOX6;;chr12:103351444..103351461,+!p1@ASCL1!1.21!15.17!ASCL1;;chr2:45168875..45168916,+!p1@SIX3!1.21!15.17!SIX3;;chr2:95963052..95963106,+!p1@KCNIP3!1.21!15.17!KCNIP3;;chr19:58545369..58545404,+!p2@ZSCAN1!1.21!15.17!ZSCAN1;;chr12:52445218..52445237,+!p1@NR4A1!1.19!178.45!NR4A1;;chr12:106976678..106976708,+!p2@RFX4!1.19!14.57!RFX4;;chr5:178368186..178368238,+!p1@ZNF454!1.17!24.89!ZNF454;;chr19:57352109..57352153,-!p2@ZIM2!1.17!13.96!ZIM2;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.16!74.66!ZNF10;;chr3:114819124..114819200,-!p3@ZBTB20!1.16!31.56!ZBTB20;;chr1:209979467..209979494,-!p1@IRF6!1.16!15.17!IRF6;;chr19:22193731..22193751,-!p1@ZNF208!1.16!13.35!ZNF208;;chr10:35484804..35484902,+!p2@CREM!1.15!49.77!CREM;;chr2:192015750..192015793,-!p2@STAT4!1.15!17.60!STAT4;;chr19:46800289..46800327,+!p2@HIF3A!1.12!12.14!HIF3A;;chr8:40755333..40755352,-!p1@ZMAT4!1.12!12.14!ZMAT4;;chr12:24102576..24102623,-!p2@SOX5!1.12!12.14!SOX5;;chr4:206390..206444,+!p1@ZNF876P!1.11!21.24!ZNF876P;;chrX:101186981..101187030,-!p1@ZMAT1!1.10!37.63!ZMAT1;;chr11:113930291..113930339,+!p2@ZBTB16!1.10!18.82!ZBTB16;;chr11:66188503..66188511,+!p1@NPAS4!1.10!11.53!NPAS4;;chr8:93107451..93107468,-!p2@RUNX1T1!1.10!11.53!RUNX1T1;;chr17:80797886..80797906,-!p1@ZNF750!1.10!11.53!ZNF750;;chr2:2328299..2328363,-!p3@MYT1L!1.08!10.93!MYT1L;;chr3:114173720..114173794,-!p6@ZBTB20!1.08!10.93!ZBTB20;;chr14:58797974..58798011,+!p3@ARID4A!1.08!10.93!ARID4A;;chr19:56988677..56988729,-!p1@ZNF667!1.06!18.82!ZNF667;;chr3:24206603..24206613,-!p17@THRB!1.05!10.32!THRB;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!1.04!65.55!ZNF580;;chr10:35484090..35484104,+!p6@CREM!1.03!9.71!CREM;;chr11:113930401..113930422,+!p3@ZBTB16!1.03!9.71!ZBTB16;;chr14:74256787..74256858,-!p6@C14orf43!1.03!9.71!C14orf43;;chrX:24169518..24169522,+!p8@ZFX!1.03!9.71!ZFX;;chr2:45168997..45169020,+!p4@SIX3!1.03!9.71!SIX3;;chr8:10588010..10588030,-!p1@SOX7!1.03!9.71!SOX7;;chr6:144329384..144329405,-!p1@PLAGL1!1.02!111.68!PLAGL1;;chr3:114866124..114866149,-!p5@ZBTB20!1.02!16.39!ZBTB20;;chr20:62680984..62680999,-!p1@SOX18!1.02!12.75!SOX18;;chr1:8585945..8586056,-!p3@RERE!1.00!30.96!RERE;;chr1:165414227..165414242,-!p2@RXRG!1.00!9.10!RXRG;;chr11:8040739..8040815,+!p4@TUB!1.00!9.10!TUB;;chr6:168333280..168333294,+!p9@MLLT4!1.00!9.10!MLLT4;;chr6:126112074..126112144,+!p1@NCOA7!0.99!119.57!NCOA7;;chr15:61521417..61521460,-!p2@RORA!0.98!19.42!RORA;;chr3:24536253..24536328,-!p1@THRB!0.98!16.39!THRB;;chr6:152126790..152126828,+!p3@ESR1!0.98!8.50!ESR1;;chr14:60975644..60975673,+!p3@SIX6!0.98!8.50!SIX6;;chr9:3525867..3525902,-!p3@RFX3!0.97!29.74!RFX3;;chr12:133707172..133707202,+!p2@ZNF10!0.97!19.42!ZNF10;;chr2:192015701..192015743,-!p1@STAT4!0.97!11.53!STAT4;;chr9:115818951..115819011,-!p1@ZFP37!0.96!25.49!ZFP37;;chr10:111987079..111987115,+!p3@MXI1!0.95!10.93!MXI1;;chr10:28034739..28034756,-!p1@MKX!0.95!7.89!MKX;;chr19:58545454..58545498,+!p1@ZSCAN1!0.95!7.89!ZSCAN1;;chr1:42384343..42384380,-!p4@HIVEP3!0.95!7.89!HIVEP3;;chr16:67198633..67198671,+!p1@HSF4!0.95!7.89!HSF4;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!0.95!7.89!SMARCE1;;chr2:45169193..45169219,+!p3@SIX3!0.95!7.89!SIX3;;chr3:181429741..181429767,+!p2@SOX2!0.95!7.89!SOX2;;chr3:24536231..24536249,-!p4@THRB!0.95!7.89!THRB;;chr4:149363494..149363543,-!p1@NR3C2!0.95!7.89!NR3C2;;chr8:77593474..77593612,+!p1@ZFHX4!0.94!33.99!ZFHX4;;chr19:38183208..38183225,-!p1@ZNF781!0.93!9.71!ZNF781;;chr9:77112244..77112262,+!p1@RORB!0.93!8.50!RORB;;chr12:54785074..54785122,-!p2@ZNF385A!0.92!11.53!ZNF385A;;chr8:80679993..80680011,-!p1@HEY1!0.92!10.93!HEY1;;chr7:35293685..35293718,-!p1@TBX20!0.92!7.28!TBX20;;chr13:72441074..72441172,-!p2@DACH1!0.92!7.28!DACH1;;chrX:147582130..147582147,+!p3@AFF2!0.92!7.28!AFF2;;chr16:67197654..67197716,+!p3@HSF4!0.92!7.28!HSF4;;chr19:37998036..37998098,+!p2@ZNF793!0.91!9.10!ZNF793;;chr18:55102598..55102623,+!p1@ONECUT2!0.89!6.68!ONECUT2;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.89!6.68!ZNF676;;chr12:106976656..106976672,+!p4@RFX4!0.89!6.68!RFX4;;chr14:29235961..29236008,+!p1@FOXG1!0.89!6.68!FOXG1;;chr14:58798013..58798071,+!p2@ARID4A!0.89!6.68!ARID4A;;chr22:21771656..21771662,+!p1@HIC2!0.89!6.68!HIC2;;chr2:45169143..45169167,+!p5@SIX3!0.89!6.68!SIX3;;chr1:151804244..151804310,-!p1@RORC!0.89!6.68!RORC;;chr1:165414414..165414430,-!p3@RXRG!0.89!6.68!RXRG;;chr19:37997812..37997866,+!p1@ZNF793!0.88!11.53!ZNF793;;chr6:144329500..144329526,-!p4@PLAGL1!0.87!15.78!PLAGL1;;chr12:56401268..56401305,+!p1@IKZF4!0.87!13.96!IKZF4;;chr6:144289132..144289134,-!p3@PLAGL1!0.86!15.17!PLAGL1;;chr20:45142154..45142227,-!p1@ZNF334!0.86!12.75!ZNF334;;chr18:6414884..6414942,-!p1@L3MBTL4!0.86!7.89!L3MBTL4;;chr4:146859927..146860055,-!p1@ZNF827!0.85!39.45!ZNF827;;chr19:11959532..11959593,+!p1@ZNF439!0.85!24.89!ZNF439;;chrX:84499081..84499115,+!p2@ZNF711!0.85!9.10!ZNF711;;chrX:101187036..101187056,-!p2@ZMAT1!0.85!6.68!ZMAT1;;chr1:40105299..40105326,-!p1@HEYL!0.85!6.07!HEYL;;chr4:111544219..111544240,-!p1@PITX2!0.85!6.07!PITX2;;chr10:43134047..43134079,-!p3@ZNF33B!0.84!8.50!ZNF33B;;chr2:113057415..113057477,+!p3@ZC3H6!0.84!7.89!ZC3H6;;chr19:45260775..45260838,+!p5@BCL3!0.84!7.89!BCL3;;chr19:44764031..44764072,+!p1@ZNF233!0.84!7.28!ZNF233;;chr15:77197655..77197716,-!p1@SCAPER!0.83!55.23!SCAPER;;chr5:88178983..88179012,-!p1@MEF2C!0.83!47.95!MEF2C;;chr7:21467674..21467727,+!p1@SP4!0.83!24.28!SP4;;chr1:47903709..47903764,+!p1@BC169308!0.83!6.68!FOXD2;;chr19:58220517..58220583,-!p1@ZNF154!0.82!18.82!ZNF154;;chr12:125003087..125003141,-!p4@NCOR2!0.82!7.28!NCOR2;;chr18:22932080..22932170,-!p1@ZNF521!0.81!24.89!ZNF521;;chr19:58238958..58239000,-!p1@ZNF671!0.81!23.67!ZNF671;;chr6:152011654..152011682,+!p1@ESR1!0.81!5.46!ESR1;;chr6:152126830..152126847,+!p4@ESR1!0.81!5.46!ESR1;;chr4:106068026..106068084,+!p1@TET2!0.80!51.59!TET2;;chr2:178128199..178128245,-!p3@NFE2L2!0.80!30.96!NFE2L2;;chr3:114866084..114866118,-!p2@ZBTB20!0.80!20.64!ZBTB20;;chr2:157198916..157198978,-!p2@NR4A2!0.80!20.03!NR4A2;;chr15:37390850..37390909,-!p3@MEIS2!0.80!10.93!MEIS2;;chr18:52989031..52989079,-!p2@TCF4!0.79!12.75!TCF4;;chr14:64970361..64970389,-!p4@ZBTB25!0.79!10.93!ZBTB25;;chr9:102584159..102584174,+!p2@NR4A3!0.79!9.71!NR4A3;;chrX:84498989..84499003,+!p1@ZNF711!0.79!7.28!ZNF711;;chr4:81105027..81105039,+!p3@PRDM8!0.79!6.07!PRDM8;;chr19:9434841..9434886,+!p1@ZNF559!0.78!27.92!ZNF559;;chr6:56954830..56954845,+!p3@ZNF451!0.78!11.53!ZNF451;;chr3:126076264..126076305,-!p2@KLF15!0.78!7.28!KLF15;;chr11:8102846..8102892,+!p1@TUB!0.78!7.28!TUB;;chr4:81104865..81104886,+!p6@PRDM8!0.78!5.46!PRDM8;;chr2:113033164..113033219,+!p1@ZC3H6!0.77!45.52!ZC3H6;;chr19:52674696..52674758,-!p1@ZNF836!0.77!15.78!ZNF836;;chr20:42136308..42136358,+!p2@L3MBTL1!0.77!6.68!L3MBTL;;chr10:64134120..64134183,+!p1@ZNF365!0.77!6.07!ZNF365;;chr11:125034605..125034636,+!p2@PKNOX2!0.77!4.86!PKNOX2;;chr11:47400078..47400106,-!p1@SPI1!0.77!4.86!SPI1;;chr2:45168959..45168990,+!p6@SIX3!0.77!4.86!SIX3;;chr3:138665937..138665968,-!p1@FOXL2!0.77!4.86!FOXL2;;chr3:24206934..24206942,-!p24@THRB!0.77!4.86!THRB;;chr15:31658288..31658338,+!p4@KLF13!0.77!4.86!KLF13;;chr17:80797863..80797874,-!p2@ZNF750!0.77!4.86!ZNF750;;chr19:37464453..37464515,+!p4@ZNF568!0.77!4.86!ZNF568;;chr19:54041574..54041589,+!p6@ZNF331!0.77!4.86!ZNF331;;chr21:39870339..39870443,-!p1@ERG!0.77!4.86!ERG;;chr5:71803177..71803255,-!p1@ZNF366!0.77!4.86!ZNF366;;chr6:152129265..152129276,+!p13@ESR1!0.77!4.86!ESR1;;chr7:100065686..100065701,-!p2@TSC22D4!0.77!4.86!TSC22D4;;chr8:30890810..30890880,-!p1@PURG!0.77!4.86!PURG;;chr19:37958086..37958150,-!p1@ZNF569!0.76!20.03!ZNF569;;chr3:44626446..44626477,+!p1@ZNF660!0.76!9.10!ZNF660;;chr6:144329531..144329546,-!p5@PLAGL1!0.76!7.89!PLAGL1;;chr6:19837592..19837621,+!p1@ID4!0.75!30.96!ID4;;chr3:44626359..44626387,+!p4@ZNF197!0.75!6.07!ZNF197;;chr3:169381420..169381535,-!p1@MECOM!0.75!5.46!MECOM;;chr13:41240737..41240787,-!p1@FOXO1!0.74!59.48!FOXO1;;chr4:87928413..87928433,+!p3@AFF1!0.74!30.96!AFF1;;chr19:38085633..38085706,-!p1@ZNF571!0.74!12.75!ZNF571;;chr3:42947600..42947680,+!p1@ZNF662!0.74!6.68!ZNF662;;chr1:164528297..164528309,+!p9@PBX1!0.74!6.07!PBX1;;chr20:51588873..51588953,+!p1@TSHZ2!0.74!6.07!TSHZ2;;chr14:33408072..33408114,+!p2@NPAS3!0.74!5.46!NPAS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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000949;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001894;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002368;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0010133
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg38.nobarcode.ctss.bed.gz
 |id=FF:10180-103C9
-|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010162
+|is_a=EFO:0002091;;FF:0010162
+|is_obsolete=
+|library_id=CNhs13805
+|library_id_phase_based=2:CNhs13805
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10180
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10180
 |name=pituitary gland - adult, donor10196
 |namespace=FANTOM5
@@ Line 44: / Line 63: @@
 |profile_rnaseq=
 |profile_srnaseq=
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 |rna_box=103
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=130.08975
 |sample_age=60
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.97759043547019e-218!GO:0005737;cytoplasm;1.80919631317185e-158!GO:0043226;organelle;2.01975152912156e-148!GO:0043229;intracellular organelle;8.21459600810204e-148!GO:0043227;membrane-bound organelle;2.54586378866804e-144!GO:0043231;intracellular membrane-bound organelle;4.12908542807933e-144!GO:0044444;cytoplasmic part;4.17652474290633e-115!GO:0044422;organelle part;2.27491007641491e-94!GO:0044446;intracellular organelle part;1.23188975742895e-92!GO:0032991;macromolecular complex;2.95318402035261e-74!GO:0030529;ribonucleoprotein complex;5.74096737457026e-60!GO:0003723;RNA binding;2.59322075648768e-57!GO:0005515;protein binding;2.43374155002295e-55!GO:0044238;primary metabolic process;2.41314861395366e-52!GO:0044237;cellular metabolic process;3.26730066228276e-52!GO:0044428;nuclear part;3.748315453515e-52!GO:0015031;protein transport;7.82392356794596e-52!GO:0033036;macromolecule localization;9.03142896928466e-51!GO:0043170;macromolecule metabolic process;1.53841182101586e-50!GO:0043233;organelle lumen;2.8122785573553e-50!GO:0031974;membrane-enclosed lumen;2.8122785573553e-50!GO:0045184;establishment of protein localization;8.25311101963695e-48!GO:0008104;protein localization;5.53938192536908e-47!GO:0005739;mitochondrion;1.88590147505368e-46!GO:0005634;nucleus;4.00403295970247e-45!GO:0016043;cellular component organization and biogenesis;1.03233826162466e-44!GO:0031090;organelle membrane;1.43723022074424e-43!GO:0046907;intracellular transport;4.35710866252812e-40!GO:0006396;RNA processing;1.46222571973428e-38!GO:0043234;protein complex;3.00379707354623e-38!GO:0016071;mRNA metabolic process;4.99556512534425e-36!GO:0006886;intracellular protein transport;7.26991940436989e-34!GO:0005840;ribosome;9.78627181234038e-33!GO:0010467;gene expression;1.12178929016573e-32!GO:0019538;protein metabolic process;1.71243143723322e-32!GO:0008380;RNA splicing;3.54820749403171e-32!GO:0031981;nuclear lumen;1.11976186701794e-31!GO:0044429;mitochondrial part;2.87104790017462e-31!GO:0006397;mRNA processing;5.0205319578672e-31!GO:0051649;establishment of cellular localization;1.00433470038104e-30!GO:0031967;organelle envelope;5.1908552279385e-30!GO:0051641;cellular localization;7.65039460478624e-30!GO:0005829;cytosol;9.82342082024289e-30!GO:0031975;envelope;9.82342082024289e-30!GO:0006412;translation;1.18724246764668e-29!GO:0043283;biopolymer metabolic process;1.37283033727211e-29!GO:0044260;cellular macromolecule metabolic process;3.06592806616506e-28!GO:0044267;cellular protein metabolic process;1.03737248138449e-27!GO:0003735;structural constituent of ribosome;1.44421007672133e-27!GO:0033279;ribosomal subunit;3.34206884646124e-25!GO:0016192;vesicle-mediated transport;6.2293211652938e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.18428928992424e-22!GO:0005654;nucleoplasm;1.57624275187025e-22!GO:0005681;spliceosome;4.33603476783019e-22!GO:0006119;oxidative phosphorylation;9.5109065824473e-22!GO:0005794;Golgi apparatus;1.06204244563613e-21!GO:0065003;macromolecular complex assembly;4.63310784496058e-21!GO:0009059;macromolecule biosynthetic process;1.51668034334464e-20!GO:0019866;organelle inner membrane;2.30739857368517e-20!GO:0044451;nucleoplasm part;2.96968350054426e-20!GO:0005740;mitochondrial envelope;3.75682623846783e-20!GO:0031966;mitochondrial membrane;1.02292876233777e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.24980816255796e-19!GO:0005743;mitochondrial inner membrane;2.17508133554713e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.86725464403842e-19!GO:0009058;biosynthetic process;8.36364184802681e-19!GO:0044249;cellular biosynthetic process;8.94598229442628e-19!GO:0006457;protein folding;2.05150390134781e-18!GO:0012505;endomembrane system;4.28215763233118e-18!GO:0022607;cellular component assembly;7.25789115603277e-18!GO:0000166;nucleotide binding;2.63396880926662e-17!GO:0048193;Golgi vesicle transport;4.40409359918228e-17!GO:0044455;mitochondrial membrane part;6.44747253451775e-17!GO:0006512;ubiquitin cycle;9.60212523214873e-17!GO:0044445;cytosolic part;2.70198347757032e-16!GO:0006996;organelle organization and biogenesis;4.951708630503e-16!GO:0016070;RNA metabolic process;6.01025496479564e-16!GO:0003676;nucleic acid binding;2.23378826827006e-15!GO:0016874;ligase activity;2.72459144644838e-15!GO:0005746;mitochondrial respiratory chain;5.07338557702112e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.25628273721325e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;6.05362199986636e-15!GO:0016462;pyrophosphatase activity;6.3494368484195e-15!GO:0006511;ubiquitin-dependent protein catabolic process;7.32696236782109e-15!GO:0031982;vesicle;7.70594271226607e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.02944282720107e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.20734817647511e-14!GO:0022618;protein-RNA complex assembly;2.18274596872527e-14!GO:0019941;modification-dependent protein catabolic process;2.18274596872527e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.18274596872527e-14!GO:0048770;pigment granule;2.4185744584308e-14!GO:0042470;melanosome;2.4185744584308e-14!GO:0044257;cellular protein catabolic process;2.77777526217161e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.01718903919478e-14!GO:0003954;NADH dehydrogenase activity;3.01718903919478e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.01718903919478e-14!GO:0031410;cytoplasmic vesicle;3.34935698016169e-14!GO:0017111;nucleoside-triphosphatase activity;3.34935698016169e-14!GO:0044265;cellular macromolecule catabolic process;5.7927166351296e-14!GO:0051082;unfolded protein binding;8.6761718441336e-14!GO:0016604;nuclear body;9.20160060638035e-14!GO:0031980;mitochondrial lumen;1.41926093333649e-13!GO:0005759;mitochondrial matrix;1.41926093333649e-13!GO:0006605;protein targeting;1.92018526969185e-13!GO:0008135;translation factor activity, nucleic acid binding;2.49136128996193e-13!GO:0031988;membrane-bound vesicle;2.84891444618551e-13!GO:0008134;transcription factor binding;3.08540342708691e-13!GO:0015934;large ribosomal subunit;3.77526562437091e-13!GO:0015935;small ribosomal subunit;6.64486225779695e-13!GO:0008565;protein transporter activity;7.71074730995764e-13!GO:0043285;biopolymer catabolic process;8.0768217543296e-13!GO:0016023;cytoplasmic membrane-bound vesicle;1.54187943988769e-12!GO:0016607;nuclear speck;1.71958864371482e-12!GO:0005783;endoplasmic reticulum;1.94526786155497e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.2317630696463e-12!GO:0045271;respiratory chain complex I;2.2317630696463e-12!GO:0005747;mitochondrial respiratory chain complex I;2.2317630696463e-12!GO:0043228;non-membrane-bound organelle;2.27769425335683e-12!GO:0043232;intracellular non-membrane-bound organelle;2.27769425335683e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.23253299038622e-12!GO:0042773;ATP synthesis coupled electron transport;4.23253299038622e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.55224598253329e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.08270433599968e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.12192687365265e-11!GO:0000375;RNA splicing, via transesterification reactions;2.12192687365265e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.12192687365265e-11!GO:0031965;nuclear membrane;2.46909367422783e-11!GO:0009057;macromolecule catabolic process;3.59590285584704e-11!GO:0000502;proteasome complex (sensu Eukaryota);4.22752662691687e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.60311102748201e-11!GO:0044248;cellular catabolic process;5.43442941748034e-11!GO:0030163;protein catabolic process;6.82305346271716e-11!GO:0032553;ribonucleotide binding;8.70262089743987e-11!GO:0032555;purine ribonucleotide binding;8.70262089743987e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.39038047688159e-11!GO:0017076;purine nucleotide binding;1.06689402907317e-10!GO:0045045;secretory pathway;1.26118574186945e-10!GO:0043412;biopolymer modification;1.56021081657449e-10!GO:0005635;nuclear envelope;2.45534000479846e-10!GO:0003743;translation initiation factor activity;2.57449291273762e-10!GO:0043687;post-translational protein modification;9.32888796606723e-10!GO:0051169;nuclear transport;1.04960787544598e-09!GO:0006464;protein modification process;1.39784350052887e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.6650349103671e-09!GO:0005730;nucleolus;1.69129892260694e-09!GO:0048475;coated membrane;2.89186191410158e-09!GO:0030117;membrane coat;2.89186191410158e-09!GO:0044431;Golgi apparatus part;3.29475435534754e-09!GO:0006413;translational initiation;3.38224585720197e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.79391903895774e-09!GO:0006913;nucleocytoplasmic transport;4.35243851490036e-09!GO:0044432;endoplasmic reticulum part;6.02282704161846e-09!GO:0015986;ATP synthesis coupled proton transport;7.21388602140722e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.21388602140722e-09!GO:0008639;small protein conjugating enzyme activity;7.72201807265812e-09!GO:0006446;regulation of translational initiation;7.72201807265812e-09!GO:0006888;ER to Golgi vesicle-mediated transport;8.99051675681294e-09!GO:0004842;ubiquitin-protein ligase activity;9.03681847482111e-09!GO:0006259;DNA metabolic process;1.03836741285482e-08!GO:0019829;cation-transporting ATPase activity;1.12742879698376e-08!GO:0005761;mitochondrial ribosome;1.20591409289687e-08!GO:0000313;organellar ribosome;1.20591409289687e-08!GO:0005768;endosome;2.5944161924353e-08!GO:0044453;nuclear membrane part;3.0437307697861e-08!GO:0019787;small conjugating protein ligase activity;3.34349291058785e-08!GO:0051186;cofactor metabolic process;4.63616949828671e-08!GO:0003712;transcription cofactor activity;5.42799396605832e-08!GO:0030120;vesicle coat;6.13291468967213e-08!GO:0030662;coated vesicle membrane;6.13291468967213e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.61578406793487e-08!GO:0006461;protein complex assembly;8.64871091568942e-08!GO:0032940;secretion by cell;1.09108068455268e-07!GO:0005643;nuclear pore;1.13567065106402e-07!GO:0003924;GTPase activity;1.23384582659335e-07!GO:0005793;ER-Golgi intermediate compartment;1.55678019960707e-07!GO:0006164;purine nucleotide biosynthetic process;1.56828382215284e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.84560589291123e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.84560589291123e-07!GO:0006163;purine nucleotide metabolic process;1.88487073267627e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.2065313171373e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.2065313171373e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.3541283637527e-07!GO:0006754;ATP biosynthetic process;2.92898037579646e-07!GO:0006753;nucleoside phosphate metabolic process;2.92898037579646e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.9786820111625e-07!GO:0009150;purine ribonucleotide metabolic process;3.02351169270353e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.1457017418122e-07!GO:0016887;ATPase activity;3.25150370681564e-07!GO:0005798;Golgi-associated vesicle;3.61418704538558e-07!GO:0006403;RNA localization;3.69092872400721e-07!GO:0050657;nucleic acid transport;4.78224959860735e-07!GO:0051236;establishment of RNA localization;4.78224959860735e-07!GO:0050658;RNA transport;4.78224959860735e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.18988219210934e-07!GO:0016564;transcription repressor activity;5.27812059814838e-07!GO:0016881;acid-amino acid ligase activity;5.42710343596499e-07!GO:0009259;ribonucleotide metabolic process;5.98512539329879e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.45405716230953e-07!GO:0009144;purine nucleoside triphosphate metabolic process;6.45405716230953e-07!GO:0006732;coenzyme metabolic process;7.01037931663414e-07!GO:0009141;nucleoside triphosphate metabolic process;7.152423359097e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.2470821714489e-07!GO:0005525;GTP binding;1.04971208208197e-06!GO:0004386;helicase activity;1.08021287001921e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.33548081427848e-06!GO:0000139;Golgi membrane;1.34589448557386e-06!GO:0009260;ribonucleotide biosynthetic process;1.39857512412484e-06!GO:0032559;adenyl ribonucleotide binding;1.63039211277176e-06!GO:0046034;ATP metabolic process;1.66447674506966e-06!GO:0005524;ATP binding;1.67220698535973e-06!GO:0009055;electron carrier activity;1.88024292971499e-06!GO:0030133;transport vesicle;2.03014859983567e-06!GO:0030554;adenyl nucleotide binding;2.16004840518171e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;2.24737773157334e-06!GO:0005789;endoplasmic reticulum membrane;2.26969069267732e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.37893534967518e-06!GO:0042623;ATPase activity, coupled;2.67848862235848e-06!GO:0048471;perinuclear region of cytoplasm;2.67848862235848e-06!GO:0017038;protein import;2.94163219324117e-06!GO:0045333;cellular respiration;3.27322890357368e-06!GO:0009060;aerobic respiration;3.76400743221675e-06!GO:0065002;intracellular protein transport across a membrane;3.83681151526994e-06!GO:0016568;chromatin modification;4.0683223020854e-06!GO:0015630;microtubule cytoskeleton;4.51433789704847e-06!GO:0030135;coated vesicle;4.93222930596493e-06!GO:0006793;phosphorus metabolic process;5.18452252237995e-06!GO:0006796;phosphate metabolic process;5.18452252237995e-06!GO:0009056;catabolic process;5.3083340483782e-06!GO:0006323;DNA packaging;6.13158281743433e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.45817997821157e-06!GO:0006613;cotranslational protein targeting to membrane;6.67408312336223e-06!GO:0044440;endosomal part;6.67983208164339e-06!GO:0010008;endosome membrane;6.67983208164339e-06!GO:0048523;negative regulation of cellular process;7.40775228593469e-06!GO:0006366;transcription from RNA polymerase II promoter;7.50181679162718e-06!GO:0000245;spliceosome assembly;8.67833309864074e-06!GO:0045259;proton-transporting ATP synthase complex;8.72835608499048e-06!GO:0032561;guanyl ribonucleotide binding;9.13484917253546e-06!GO:0019001;guanyl nucleotide binding;9.13484917253546e-06!GO:0016044;membrane organization and biogenesis;9.38016723636093e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.29208674662303e-05!GO:0008026;ATP-dependent helicase activity;1.31051222267999e-05!GO:0051028;mRNA transport;1.37650157719491e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.39807646164902e-05!GO:0005770;late endosome;1.43198291789738e-05!GO:0042254;ribosome biogenesis and assembly;1.73148869972825e-05!GO:0005773;vacuole;1.94421183454797e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.18008605802021e-05!GO:0000151;ubiquitin ligase complex;2.18008605802021e-05!GO:0043566;structure-specific DNA binding;2.30605311460545e-05!GO:0032446;protein modification by small protein conjugation;2.50263055165144e-05!GO:0051188;cofactor biosynthetic process;2.75948645868601e-05!GO:0046930;pore complex;2.85411666033162e-05!GO:0003714;transcription corepressor activity;2.93838268440525e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.23941366637895e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.23941366637895e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.23941366637895e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.60203031418726e-05!GO:0031252;leading edge;3.89322501051793e-05!GO:0016567;protein ubiquitination;4.76746963152533e-05!GO:0006399;tRNA metabolic process;4.83492592644344e-05!GO:0006612;protein targeting to membrane;5.3851620153742e-05!GO:0043038;amino acid activation;5.81066080259006e-05!GO:0006418;tRNA aminoacylation for protein translation;5.81066080259006e-05!GO:0043039;tRNA aminoacylation;5.81066080259006e-05!GO:0009108;coenzyme biosynthetic process;7.31797804945239e-05!GO:0016859;cis-trans isomerase activity;7.84592102404608e-05!GO:0006752;group transfer coenzyme metabolic process;8.10774479347423e-05!GO:0006099;tricarboxylic acid cycle;8.50675896144627e-05!GO:0046356;acetyl-CoA catabolic process;8.50675896144627e-05!GO:0050794;regulation of cellular process;8.9037572440982e-05!GO:0003724;RNA helicase activity;0.000114409588729149!GO:0019899;enzyme binding;0.000122787815195922!GO:0051170;nuclear import;0.00012415052732264!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000133259517995075!GO:0015399;primary active transmembrane transporter activity;0.000133259517995075!GO:0012501;programmed cell death;0.000155813856029769!GO:0006891;intra-Golgi vesicle-mediated transport;0.000158184046688458!GO:0015631;tubulin binding;0.000158974219808148!GO:0048519;negative regulation of biological process;0.000178097741192549!GO:0008654;phospholipid biosynthetic process;0.000183357234634047!GO:0006606;protein import into nucleus;0.000183357234634047!GO:0006084;acetyl-CoA metabolic process;0.000190437342151902!GO:0006915;apoptosis;0.000200601859235038!GO:0003697;single-stranded DNA binding;0.000207044033479334!GO:0008092;cytoskeletal protein binding;0.000233664429741553!GO:0006974;response to DNA damage stimulus;0.000234990643511719!GO:0000323;lytic vacuole;0.000236085475492239!GO:0005764;lysosome;0.000236085475492239!GO:0051168;nuclear export;0.000250263409729088!GO:0051789;response to protein stimulus;0.000256522690139965!GO:0006986;response to unfolded protein;0.000256522690139965!GO:0016310;phosphorylation;0.000293390080069311!GO:0008219;cell death;0.000298436120982502!GO:0016265;death;0.000298436120982502!GO:0005048;signal sequence binding;0.000316839561990015!GO:0009109;coenzyme catabolic process;0.000342569584689649!GO:0031072;heat shock protein binding;0.000349260348935566!GO:0022406;membrane docking;0.000359391089212928!GO:0048278;vesicle docking;0.000359391089212928!GO:0050789;regulation of biological process;0.000393988823382613!GO:0030137;COPI-coated vesicle;0.000407906825661499!GO:0031324;negative regulation of cellular metabolic process;0.000412403178530108!GO:0006414;translational elongation;0.000424348568759312!GO:0005839;proteasome core complex (sensu Eukaryota);0.000439303529083192!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000456047583591893!GO:0030658;transport vesicle membrane;0.000474366906173403!GO:0006892;post-Golgi vesicle-mediated transport;0.000475651643444893!GO:0030118;clathrin coat;0.000506430659951561!GO:0051276;chromosome organization and biogenesis;0.000563812832189328!GO:0009892;negative regulation of metabolic process;0.000563812832189328!GO:0005667;transcription factor complex;0.000593144842812898!GO:0051246;regulation of protein metabolic process;0.000593679563373914!GO:0006904;vesicle docking during exocytosis;0.000616309408939465!GO:0005813;centrosome;0.000620497288414154!GO:0043623;cellular protein complex assembly;0.000647147522180378!GO:0008250;oligosaccharyl transferase complex;0.000676327103227288!GO:0006897;endocytosis;0.000684618270961623!GO:0010324;membrane invagination;0.000684618270961623!GO:0019222;regulation of metabolic process;0.000733245661073027!GO:0005874;microtubule;0.00075995005683219!GO:0004298;threonine endopeptidase activity;0.000782280524620472!GO:0048500;signal recognition particle;0.000795760441619683!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000840118046568527!GO:0008287;protein serine/threonine phosphatase complex;0.000891095241792149!GO:0043069;negative regulation of programmed cell death;0.000895416287585173!GO:0030663;COPI coated vesicle membrane;0.000976889253900651!GO:0030126;COPI vesicle coat;0.000976889253900651!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000988993998047944!GO:0008017;microtubule binding;0.000992573985025832!GO:0003713;transcription coactivator activity;0.00100985713300148!GO:0051187;cofactor catabolic process;0.0010115020290672!GO:0004576;oligosaccharyl transferase activity;0.00101577109154445!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00104708673386386!GO:0006281;DNA repair;0.001049090841889!GO:0005769;early endosome;0.00108182462729366!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00108185615135347!GO:0043021;ribonucleoprotein binding;0.00112677361440963!GO:0043066;negative regulation of apoptosis;0.00116371225528141!GO:0030127;COPII vesicle coat;0.00119217644655084!GO:0012507;ER to Golgi transport vesicle membrane;0.00119217644655084!GO:0022890;inorganic cation transmembrane transporter activity;0.00121652529483145!GO:0030134;ER to Golgi transport vesicle;0.00123278057236199!GO:0016853;isomerase activity;0.00127613817788556!GO:0005905;coated pit;0.00128310513887809!GO:0051920;peroxiredoxin activity;0.00132989082569785!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00140872162978094!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00140872162978094!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00140872162978094!GO:0008186;RNA-dependent ATPase activity;0.00147228622214341!GO:0006916;anti-apoptosis;0.00147228622214341!GO:0005788;endoplasmic reticulum lumen;0.00149394128547977!GO:0007264;small GTPase mediated signal transduction;0.00150841087679337!GO:0043492;ATPase activity, coupled to movement of substances;0.00166716313922107!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00167990790313415!GO:0008361;regulation of cell size;0.00183845802313734!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00185195624326954!GO:0030660;Golgi-associated vesicle membrane;0.0019493953344159!GO:0016481;negative regulation of transcription;0.00200070603886137!GO:0015980;energy derivation by oxidation of organic compounds;0.00210921157846932!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00214188478180396!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00217537094162039!GO:0045047;protein targeting to ER;0.00217537094162039!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00218436821337909!GO:0003729;mRNA binding;0.00218750033002932!GO:0033116;ER-Golgi intermediate compartment membrane;0.0022303192537999!GO:0005815;microtubule organizing center;0.00242190146872423!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00250069585942661!GO:0000314;organellar small ribosomal subunit;0.00251487632955151!GO:0005763;mitochondrial small ribosomal subunit;0.00251487632955151!GO:0016072;rRNA metabolic process;0.00254147253034703!GO:0006402;mRNA catabolic process;0.00256218662556174!GO:0006364;rRNA processing;0.00256221860673197!GO:0016791;phosphoric monoester hydrolase activity;0.00257573743930735!GO:0016197;endosome transport;0.00268759968065713!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00279358654420959!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00298614909565996!GO:0030867;rough endoplasmic reticulum membrane;0.00300361030053652!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00329260220298651!GO:0016049;cell growth;0.00331146530597826!GO:0012506;vesicle membrane;0.00334985392637405!GO:0051087;chaperone binding;0.00369243825251799!GO:0006333;chromatin assembly or disassembly;0.00371942054308046!GO:0031628;opioid receptor binding;0.00373451733125058!GO:0031852;mu-type opioid receptor binding;0.00373451733125058!GO:0003690;double-stranded DNA binding;0.00377461024263235!GO:0051427;hormone receptor binding;0.00401338963885144!GO:0004004;ATP-dependent RNA helicase activity;0.00415681079457592!GO:0005774;vacuolar membrane;0.00436864726314984!GO:0007005;mitochondrion organization and biogenesis;0.00437229628527648!GO:0006091;generation of precursor metabolites and energy;0.00443825063504378!GO:0008312;7S RNA binding;0.00457594091437619!GO:0001558;regulation of cell growth;0.0046627805036547!GO:0005083;small GTPase regulator activity;0.00471238736308287!GO:0003711;transcription elongation regulator activity;0.00486301780222158!GO:0016363;nuclear matrix;0.00501839066297609!GO:0005885;Arp2/3 protein complex;0.00509338804649724!GO:0006607;NLS-bearing substrate import into nucleus;0.00510952410809956!GO:0033673;negative regulation of kinase activity;0.00531832203303179!GO:0006469;negative regulation of protein kinase activity;0.00531832203303179!GO:0008180;signalosome;0.00548077955586026!GO:0051128;regulation of cellular component organization and biogenesis;0.00570815039102939!GO:0046489;phosphoinositide biosynthetic process;0.0057330872389645!GO:0045786;negative regulation of progression through cell cycle;0.00584471032557792!GO:0046467;membrane lipid biosynthetic process;0.00589931677614329!GO:0031124;mRNA 3'-end processing;0.00602890260724897!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00618985947656303!GO:0005762;mitochondrial large ribosomal subunit;0.00618985947656303!GO:0000315;organellar large ribosomal subunit;0.00618985947656303!GO:0018196;peptidyl-asparagine modification;0.00645108992076068!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00645108992076068!GO:0005791;rough endoplasmic reticulum;0.00662425271224653!GO:0031902;late endosome membrane;0.00679444377809604!GO:0050811;GABA receptor binding;0.00701856954641901!GO:0000059;protein import into nucleus, docking;0.00709727731220775!GO:0035257;nuclear hormone receptor binding;0.00723321632617278!GO:0004721;phosphoprotein phosphatase activity;0.0072411836614819!GO:0009719;response to endogenous stimulus;0.00733160062649777!GO:0046474;glycerophospholipid biosynthetic process;0.00802737517011734!GO:0006383;transcription from RNA polymerase III promoter;0.00802737517011734!GO:0065004;protein-DNA complex assembly;0.00831820079319515!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00840138329664055!GO:0004667;prostaglandin-D synthase activity;0.00840138329664055!GO:0050802;circadian sleep/wake cycle, sleep;0.00840138329664055!GO:0022410;circadian sleep/wake cycle process;0.00840138329664055!GO:0042749;regulation of circadian sleep/wake cycle;0.00840138329664055!GO:0019783;small conjugating protein-specific protease activity;0.00844992831251746!GO:0006818;hydrogen transport;0.00851382393643627!GO:0008139;nuclear localization sequence binding;0.00869363025027678!GO:0044433;cytoplasmic vesicle part;0.00874322906378516!GO:0006810;transport;0.00906016509202842!GO:0008320;protein transmembrane transporter activity;0.00962099592812885!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00972593022883136!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00972593022883136!GO:0048487;beta-tubulin binding;0.00990455998053997!GO:0008601;protein phosphatase type 2A regulator activity;0.0099655538108789!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0102412067769168!GO:0015992;proton transport;0.0102588790669567!GO:0031123;RNA 3'-end processing;0.0103543829269785!GO:0009117;nucleotide metabolic process;0.0104770098750801!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0105618591863623!GO:0004860;protein kinase inhibitor activity;0.0107617220139318!GO:0006350;transcription;0.0113166328329071!GO:0030384;phosphoinositide metabolic process;0.0114175866510994!GO:0051348;negative regulation of transferase activity;0.0120457361451152!GO:0004221;ubiquitin thiolesterase activity;0.0122112515128154!GO:0016740;transferase activity;0.0123822967711865!GO:0004843;ubiquitin-specific protease activity;0.0124207320930848!GO:0030659;cytoplasmic vesicle membrane;0.0130468488880216!GO:0031323;regulation of cellular metabolic process;0.0131171197498976!GO:0030027;lamellipodium;0.0131171197498976!GO:0003746;translation elongation factor activity;0.0138122646788248!GO:0044437;vacuolar part;0.0138219786874518!GO:0000159;protein phosphatase type 2A complex;0.0141300465036868!GO:0006611;protein export from nucleus;0.0142688147466222!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0143798430377079!GO:0006650;glycerophospholipid metabolic process;0.014793408204773!GO:0016563;transcription activator activity;0.0156600222181919!GO:0030695;GTPase regulator activity;0.0158155199089009!GO:0019867;outer membrane;0.0158280967550032!GO:0030036;actin cytoskeleton organization and biogenesis;0.0160281267214688!GO:0000209;protein polyubiquitination;0.0165989104103997!GO:0005869;dynactin complex;0.0170682932420739!GO:0016311;dephosphorylation;0.0171908447068052!GO:0006401;RNA catabolic process;0.0171975225350783!GO:0001726;ruffle;0.017228520362207!GO:0019887;protein kinase regulator activity;0.0174036695370114!GO:0010468;regulation of gene expression;0.0175290047570394!GO:0016585;chromatin remodeling complex;0.0177007422578501!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0177007422578501!GO:0015002;heme-copper terminal oxidase activity;0.0177007422578501!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0177007422578501!GO:0004129;cytochrome-c oxidase activity;0.0177007422578501!GO:0065007;biological regulation;0.0178340421213483!GO:0008270;zinc ion binding;0.017889981330874!GO:0007049;cell cycle;0.0179975519539722!GO:0031968;organelle outer membrane;0.0180292800420059!GO:0005741;mitochondrial outer membrane;0.0184770098229091!GO:0005938;cell cortex;0.0187054890819454!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0191595460895028!GO:0016615;malate dehydrogenase activity;0.0194432708967925!GO:0030176;integral to endoplasmic reticulum membrane;0.0195934365350271!GO:0046903;secretion;0.0195934365350271!GO:0016272;prefoldin complex;0.0201734651158159!GO:0045892;negative regulation of transcription, DNA-dependent;0.020497189172494!GO:0005875;microtubule associated complex;0.0205384374153119!GO:0043284;biopolymer biosynthetic process;0.0208775668040934!GO:0016050;vesicle organization and biogenesis;0.0209026519903398!GO:0006378;mRNA polyadenylation;0.0209895433119319!GO:0016913;follicle-stimulating hormone activity;0.0230573493581212!GO:0031901;early endosome membrane;0.0234356306438478!GO:0016779;nucleotidyltransferase activity;0.0234356306438478!GO:0016251;general RNA polymerase II transcription factor activity;0.0234356306438478!GO:0006405;RNA export from nucleus;0.0234824619227068!GO:0006376;mRNA splice site selection;0.0235061973280037!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0235061973280037!GO:0031625;ubiquitin protein ligase binding;0.0243656450943897!GO:0019843;rRNA binding;0.0246661875074055!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0250699494679097!GO:0007004;telomere maintenance via telomerase;0.0252666421086795!GO:0051252;regulation of RNA metabolic process;0.0253778042325471!GO:0008154;actin polymerization and/or depolymerization;0.0254584905091026!GO:0030119;AP-type membrane coat adaptor complex;0.0255304515847753!GO:0005765;lysosomal membrane;0.0257055201038685!GO:0008047;enzyme activator activity;0.0258308096786519!GO:0009081;branched chain family amino acid metabolic process;0.026248946896567!GO:0004674;protein serine/threonine kinase activity;0.0264613490123858!GO:0007030;Golgi organization and biogenesis;0.0264613490123858!GO:0048245;eosinophil chemotaxis;0.0265074168660064!GO:0006839;mitochondrial transport;0.0265450420313696!GO:0005868;cytoplasmic dynein complex;0.0267495720391901!GO:0003702;RNA polymerase II transcription factor activity;0.0270587466553097!GO:0006338;chromatin remodeling;0.0272665604329767!GO:0042802;identical protein binding;0.0281261349676266!GO:0045454;cell redox homeostasis;0.0283316651635703!GO:0000049;tRNA binding;0.0293788980093713!GO:0007010;cytoskeleton organization and biogenesis;0.0297599868373516!GO:0017166;vinculin binding;0.029798624302965!GO:0030132;clathrin coat of coated pit;0.0302520821817337!GO:0006352;transcription initiation;0.0315107237384684!GO:0030880;RNA polymerase complex;0.0317039595203498!GO:0051540;metal cluster binding;0.0318913189448645!GO:0051536;iron-sulfur cluster binding;0.0318913189448645!GO:0030521;androgen receptor signaling pathway;0.0322545854812177!GO:0030140;trans-Golgi network transport vesicle;0.0325264844870977!GO:0051287;NAD binding;0.0328377399306463!GO:0006108;malate metabolic process;0.0337241357210254!GO:0006497;protein amino acid lipidation;0.033779740376748!GO:0008286;insulin receptor signaling pathway;0.033779740376748!GO:0030125;clathrin vesicle coat;0.0350469024350561!GO:0030665;clathrin coated vesicle membrane;0.0350469024350561!GO:0030029;actin filament-based process;0.0361090549114195!GO:0030136;clathrin-coated vesicle;0.0361090549114195!GO:0040029;regulation of gene expression, epigenetic;0.0367111934123676!GO:0016787;hydrolase activity;0.0367935692162675!GO:0019210;kinase inhibitor activity;0.0369130593282437!GO:0005684;U2-dependent spliceosome;0.0371854082543982!GO:0043488;regulation of mRNA stability;0.0372779854530072!GO:0043487;regulation of RNA stability;0.0372779854530072!GO:0030131;clathrin adaptor complex;0.0382086868115753!GO:0043681;protein import into mitochondrion;0.0384414923019709!GO:0042158;lipoprotein biosynthetic process;0.0406278657054171!GO:0000339;RNA cap binding;0.0408756727020773!GO:0006470;protein amino acid dephosphorylation;0.0412788992153438!GO:0016790;thiolester hydrolase activity;0.0424463303639!GO:0008097;5S rRNA binding;0.0429428948666574!GO:0007243;protein kinase cascade;0.0432331048711084!GO:0016579;protein deubiquitination;0.0436054720830433!GO:0031371;ubiquitin conjugating enzyme complex;0.0448483144439416!GO:0005832;chaperonin-containing T-complex;0.0451485602730709!GO:0032200;telomere organization and biogenesis;0.0462651486006357!GO:0000723;telomere maintenance;0.0462651486006357!GO:0016301;kinase activity;0.0462651486006357!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0464381889359409!GO:0048489;synaptic vesicle transport;0.0468271760289776!GO:0009165;nucleotide biosynthetic process;0.0469287265550406!GO:0006595;polyamine metabolic process;0.0471135870325591!GO:0051539;4 iron, 4 sulfur cluster binding;0.0480496968538528!GO:0019207;kinase regulator activity;0.0480996830677395!GO:0008022;protein C-terminus binding;0.0493474772874802
 |sample_id=10180
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=pituitary gland
 |top_motifs=RFX1:3.50377996178;LHX3,4:3.44258808165;ALX1:3.33206867987;POU6F1:2.72396209933;RFX2..5_RFXANK_RFXAP:2.47661433186;ADNP_IRX_SIX_ZHX:2.37651977111;ATF6:2.33211812166;AIRE:2.257639025;FOXP3:2.05444961297;ATF2:2.04428374357;FOXN1:2.00936720316;POU1F1:1.95980234543;AR:1.89126607717;REST:1.83600135169;NRF1:1.8161414488;RREB1:1.65188367378;ONECUT1,2:1.64531052261;SNAI1..3:1.6442454742;MYOD1:1.61187214216;CREB1:1.51652948646;MYFfamily:1.50991523852;MAFB:1.50708077652;ZEB1:1.4513392871;GATA4:1.42193646257;CUX2:1.40975042612;FOXA2:1.40432624956;PAX1,9:1.40017817851;TGIF1:1.3830337221;HIF1A:1.38044843057;SREBF1,2:1.36823609707;LMO2:1.3452330938;AHR_ARNT_ARNT2:1.33590867249;JUN:1.30216753226;TEF:1.23369791128;XBP1:1.1893255708;NHLH1,2:1.17173189036;GCM1,2:1.1350271866;ATF4:1.10074114663;HMGA1,2:1.0842785572;ARID5B:1.07585207764;BPTF:1.06854352767;HOX{A6,A7,B6,B7}:1.05811866153;NKX3-2:1.03079159341;FOX{D1,D2}:1.00788179533;PRDM1:1.00262188064;HAND1,2:0.989538343004;EP300:0.970463524633;EGR1..3:0.961817557248;ZFP161:0.951109833056;TBX4,5:0.949989478782;NKX2-3_NKX2-5:0.923475336283;MTF1:0.918394745339;NANOG:0.915915221355;YY1:0.892954608045;MED-1{core}:0.880030127401;HMX1:0.87552963238;NKX6-1,2:0.863867148807;ESRRA:0.860461277868;PAX4:0.854475582291;PRRX1,2:0.843566373027;HIC1:0.807598500892;TLX2:0.79860127023;ZNF143:0.791778573801;GFI1B:0.773607404061;MAZ:0.702585492901;ATF5_CREB3:0.698672693604;PAX6:0.698286652533;GTF2I:0.678664046844;ELK1,4_GABP{A,B1}:0.669612353055;ZIC1..3:0.62518972214;SP1:0.614767576219;PATZ1:0.574533018068;ZBTB6:0.535631483464;HOX{A4,D4}:0.529312436539;HOXA9_MEIS1:0.508028105475;STAT1,3:0.503424579567;KLF4:0.503321507704;EVI1:0.497828361297;STAT2,4,6:0.49121125902;POU3F1..4:0.440068012145;SOX17:0.421883411121;MZF1:0.411015858123;IKZF2:0.409836500541;TBP:0.394667507573;GFI1:0.389390254944;VSX1,2:0.382243562035;IRF7:0.38015435168;PAX5:0.374159411024;SMAD1..7,9:0.371818612773;NFIX:0.352467535769;MTE{core}:0.321865150962;SOX5:0.288488041874;DBP:0.286329573724;ZBTB16:0.270565820216;CDC5L:0.270478943635;NFIL3:0.268926911697;NR3C1:0.265395963307;TFAP2B:0.249344266908;NR1H4:0.240684791173;LEF1_TCF7_TCF7L1,2:0.229471955144;MEF2{A,B,C,D}:0.19717909577;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.164798926515;PITX1..3:0.164721711609;RBPJ:0.138773385021;OCT4_SOX2{dimer}:0.114528701117;FOX{F1,F2,J1}:0.0990219424086;FOXQ1:0.0937497240633;BREu{core}:0.0797324268502;FOXP1:0.0721763467396;PDX1:0.055346484309;PAX8:0.0446773722261;CDX1,2,4:0.0421827605111;FOXM1:0.0295846423941;SOX{8,9,10}:0.018192872644;FOXD3:0.0175836585382;RORA:0.0151744045582;TOPORS:0.0145815728135;ZNF423:0.00860380520507;TAL1_TCF{3,4,12}:0.000585040423519;IKZF1:-0.0279924385538;CEBPA,B_DDIT3:-0.092784870159;MYBL2:-0.110143785234;NFE2L1:-0.114312059835;CRX:-0.125369878473;FOX{I1,J2}:-0.137812711883;PAX3,7:-0.158959077504;IRF1,2:-0.17651068925;GATA6:-0.202530406437;SPIB:-0.243108955523;PBX1:-0.254539354827;SOX2:-0.2647916932;EBF1:-0.272549014493;FOXO1,3,4:-0.282560407167;NKX2-1,4:-0.285088953466;ELF1,2,4:-0.285558631896;GLI1..3:-0.294801963204;SPZ1:-0.296400781818;NFY{A,B,C}:-0.297276226154;HBP1_HMGB_SSRP1_UBTF:-0.302028890332;HNF1A:-0.309091475641;ALX4:-0.309402933599;TLX1..3_NFIC{dimer}:-0.311814775691;ZNF238:-0.344167262978;NKX3-1:-0.404107854908;NFE2:-0.432718787838;TEAD1:-0.432864472777;FOSL2:-0.445601162515;NANOG{mouse}:-0.456987375562;PAX2:-0.491673202881;ZNF384:-0.502373011165;ETS1,2:-0.516072178541;UFEwm:-0.524217483303;DMAP1_NCOR{1,2}_SMARC:-0.537185180144;SPI1:-0.537374279364;TFAP4:-0.566663554275;BACH2:-0.568012726676;HSF1,2:-0.600044086855;PPARG:-0.618072127815;FOS_FOS{B,L1}_JUN{B,D}:-0.67887540972;NR6A1:-0.697561472751;HLF:-0.70531156432;GZF1:-0.718270434087;TP53:-0.723228306617;POU2F1..3:-0.748088855712;XCPE1{core}:-0.748635164746;RXRA_VDR{dimer}:-0.760479828445;GTF2A1,2:-0.760963458638;NR5A1,2:-0.778847774527;NFATC1..3:-0.819002832854;NFKB1_REL_RELA:-0.822910623893;NFE2L2:-0.857056491193;MYB:-0.863018937184;TFAP2{A,C}:-0.879886878058;HNF4A_NR2F1,2:-0.888338148401;RUNX1..3:-0.91725171879;HOX{A5,B5}:-0.938431525722;TFCP2:-1.03651592612;ESR1:-1.0368461614;TFDP1:-1.04054834926;FOXL1:-1.06981392956;T:-1.07164100554;bHLH_family:-1.07751983804;RXR{A,B,G}:-1.15771406362;POU5F1:-1.21897710659;E2F1..5:-1.32957529129;SRF:-1.35597912393;STAT5{A,B}:-1.39562832554;EN1,2:-1.43656120757;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.56640441235;ZNF148:-1.61245466233;NKX2-2,8:-1.80035370656;HES1:-2.24848063024
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10180-103C9;search_select_hide=table117:FF:10180-103C9
 }}

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FF:10180-103C9: Difference between revisions

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Latest revision as of 12:25, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0