FF:10202-103F4: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005592 | |||
|accession_numbers=CAGE;DRX008733;DRR009605;DRZ001030;DRZ002415;DRZ012380;DRZ013765 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001044,UBERON:0001736,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000161,UBERON:0001444,UBERON:0002553,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003293,UBERON:0003294,UBERON:0001829,UBERON:0002365,UBERON:0000464,UBERON:0002530,UBERON:0010047,UBERON:0003408,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0001041,UBERON:0000166,UBERON:0000167,UBERON:0002330 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001044,UBERON:0001736,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000161,UBERON:0001444,UBERON:0002553,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003293,UBERON:0003294,UBERON:0001829,UBERON:0002365,UBERON:0000464,UBERON:0002530,UBERON:0010047,UBERON:0003408,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0001041,UBERON:0000166,UBERON:0000167,UBERON:0002330 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.66!459.19!EHF;;chr2:122042770..122042785,-!p1@TFCP2L1!2.32!208.26!TFCP2L1;;chr7:97840743..97840786,+!p1@BHLHA15!2.26!182.12!BHLHA15;;chr22:38380543..38380569,-!p1@SOX10!2.22!165.60!SOX10;;chr11:129245526..129245553,+!p1@BARX2!2.06!112.85!BARX2;;chr11:34535297..34535317,-!p1@ELF5!2.04!109.64!ELF5;;chr14:37131058..37131139,+!p1@PAX9!2.00!98.17!PAX9;;chr6:34524093..34524135,-!p1@SPDEF!1.92!81.65!SPDEF;;chr11:34535332..34535347,-!p2@ELF5!1.91!80.28!ELF5;;chr6:34524049..34524089,-!p2@SPDEF!1.91!79.82!SPDEF;;chr11:34645791..34645836,+!p3@EHF!1.88!74.77!EHF;;chr17:80797886..80797906,-!p1@ZNF750!1.87!72.48!ZNF750;;chr1:151804244..151804310,-!p1@RORC!1.86!71.10!RORC;;chr22:29196433..29196445,-!p4@XBP1!1.80!68.81!XBP1;;chr7:14028488..14028516,-!p2@ETV1!1.72!56.88!ETV1;;chr1:201979743..201979762,+!p1@ELF3!1.70!49.08!ELF3;;chr5:134369879..134369898,-!p2@PITX1!1.70!48.63!PITX1;;chr6:391743..391759,+!p1@IRF4!1.69!48.17!IRF4;;chr11:34642656..34642667,+!p2@EHF!1.63!41.74!EHF;;chr5:2751762..2751784,-!p1@IRX2!1.63!41.29!IRX2;;chr22:29196492..29196503,-!p3@XBP1!1.59!58.26!XBP1;;chr6:1312325..1312340,+!p1@FOXQ1!1.50!48.63!FOXQ1;;chr16:85932760..85932775,+!p1@IRF8!1.47!28.44!IRF8;;chr2:19558373..19558392,-!p1@OSR1!1.46!74.77!OSR1;;chr14:61116183..61116208,-!p1@SIX1!1.45!100.00!SIX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.43!33.03!TFAP2C;;chr13:37446984..37446995,-!p13@SMAD9!1.43!25.69!SMAD9;;chr11:129245736..129245758,+!p2@BARX2!1.42!25.23!BARX2;;chr5:134369905..134369972,-!p1@PITX1!1.40!36.70!PITX1;;chr11:111249993..111250006,-!p1@POU2AF1!1.40!24.31!POU2AF1;;chr1:201979703..201979721,+!p2@ELF3!1.38!22.94!ELF3;;chr17:53342311..53342400,+!p1@HLF!1.37!25.69!HLF;;chr10:102891048..102891078,+!p1@TLX1!1.37!22.48!TLX1;;chr9:14180778..14180808,-!p15@NFIB!1.37!22.48!NFIB;;chr1:209979467..209979494,-!p1@IRF6!1.36!24.77!IRF6;;chrY:21906594..21906622,-!p1@KDM5D!1.34!21.10!KDM5D;;chr19:50922187..50922204,+!p1@SPIB!1.34!20.64!SPIB;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.34!20.64!PEG3;;chr20:62680984..62680999,-!p1@SOX18!1.33!26.61!SOX18;;chr8:102504651..102504683,+!p1@GRHL2!1.32!19.73!GRHL2;;chr10:8096631..8096660,+!p1@GATA3!1.28!21.56!GATA3;;chr13:37446840..37446847,-!p15@SMAD9!1.25!16.97!SMAD9;;chr20:50159198..50159299,-!p1@NFATC2!1.24!23.85!NFATC2;;chr12:52437488..52437507,+!p2@NR4A1!1.24!16.51!NR4A1;;chr1:10754477..10754517,-!p1@CASZ1!1.23!26.15!CASZ1;;chr4:149363494..149363543,-!p1@NR3C2!1.23!16.06!NR3C2;;chr6:34524025..34524045,-!p3@SPDEF!1.21!15.14!SPDEF;;chr1:217251619..217251658,-!p6@ESRRG!1.18!14.22!ESRRG;;chr19:13135582..13135600,+!p3@NFIX!1.18!14.22!NFIX;;chr12:52445218..52445237,+!p1@NR4A1!1.17!172.48!NR4A1;;chr17:70117153..70117174,+!p1@SOX9!1.17!139.45!SOX9;;chr15:42749722..42749739,-!p2@ZFP106!1.17!24.77!ZFP106;;chr11:113930425..113930471,+!p1@ZBTB16!1.17!19.73!ZBTB16;;chr16:1031762..1031781,+!p1@SOX8!1.17!13.76!SOX8;;chr9:129376201..129376225,+!p1@LMX1B!1.16!13.30!LMX1B;;chr22:41763452..41763466,+!p2@TEF!1.16!13.30!TEF;;chr3:71355163..71355209,-!p5@FOXP1!1.15!18.35!FOXP1;;chr1:170632285..170632309,+!p1@PRRX1!1.14!14.68!PRRX1;;chr1:153940716..153940739,+!p4@CREB3L4!1.14!12.84!CREB3L4;;chr19:46801639..46801699,+!p1@HIF3A!1.13!12.39!HIF3A;;chr1:10856639..10856662,-!p2@CASZ1!1.13!12.39!CASZ1;;chr2:231090433..231090469,+!p1@SP140!1.13!12.39!SP140;;chr5:2751785..2751808,-!p2@IRX2!1.13!12.39!IRX2;;chr9:129376233..129376251,+!p2@LMX1B!1.13!12.39!LMX1B;;chrY:2803415..2803468,+!p1@ZFY!1.11!11.93!ZFY;;chr1:217250308..217250349,-!p9@ESRRG!1.10!11.47!ESRRG;;chr9:22447422..22447483,+!p1@DMRTA1!1.08!11.01!DMRTA1;;chr2:68592406..68592424,+!p1@PLEK!1.08!11.01!PLEK;;chr4:149363475..149363492,-!p2@NR3C2!1.08!11.01!NR3C2;;chr14:38064429..38064486,-!p1@FOXA1!1.08!11.01!FOXA1;;chr3:114819124..114819200,-!p3@ZBTB20!1.07!25.23!ZBTB20;;chr6:10415276..10415341,-!p2@TFAP2A!1.06!12.84!TFAP2A;;chr6:1612300..1612324,+!p3@FOXC1!1.06!10.55!FOXC1;;chr7:14026022..14026044,-!p7@ETV1!1.06!10.55!ETV1;;chr21:39870339..39870443,-!p1@ERG!1.05!10.09!ERG;;chr22:29196547..29196563,-!p2@XBP1!1.02!355.97!XBP1;;chr1:164528410..164528428,+!p1@PBX1!1.01!70.64!PBX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.01!48.63!CREB3L1;;chr6:1610293..1610310,+!p1@FOXC1!1.01!15.60!FOXC1;;chr7:15726296..15726315,-!p1@MEOX2!1.01!9.17!MEOX2;;chrX:107018969..107019024,-!p6@TSC22D3!0.99!12.39!TSC22D3;;chr11:34654104..34654118,+!p5@EHF!0.99!8.72!EHF;;chr3:18466787..18466839,-!p1@SATB1!0.98!38.99!SATB1;;chr2:66662249..66662267,+!p2@MEIS1!0.98!33.49!MEIS1;;chr16:54320646..54320672,-!p2@IRX3!0.97!12.84!IRX3;;chr16:54320101..54320125,-!p4@IRX3!0.97!11.93!IRX3;;chr3:114819101..114819121,-!p7@ZBTB20!0.97!8.26!ZBTB20;;chr11:47400078..47400106,-!p1@SPI1!0.97!8.26!SPI1;;chr12:52449834..52449859,+!p16@NR4A1!0.97!8.26!NR4A1;;chr19:49140609..49140643,-!p1@DBP!0.96!46.79!DBP;;chr12:26277956..26277980,-!p1@BHLHE41!0.96!30.28!BHLHE41;;chr1:61547894..61547968,+!p2@NFIA!0.96!24.31!NFIA;;chr1:61548069..61548102,+!p3@NFIA!0.94!19.27!NFIA;;ch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OR3!0.33!35.32!RCOR3;;chr22:21356016..21356105,-!p1@THAP7!0.33!30.28!THAP7;;chr2:238536207..238536290,+!p2@LRRFIP1!0.33!18.35!LRRFIP1;;chr8:116681194..116681214,-!p1@TRPS1!0.33!17.43!TRPS1;;chr12:51566849..51566927,-!p1@TFCP2!0.33!16.06!TFCP2;;chr9:130186653..130186734,+!p1@ZNF79!0.33!13.76!ZNF79;;chr12:48744642..48744733,-!p1@ZNF641!0.33!12.39!ZNF641;;chr13:45151259..45151326,-!p2@TSC22D1!0.33!11.01!TSC22D1;;chr4:146859927..146860055,-!p1@ZNF827!0.33!11.01!ZNF827;;chr9:3525968..3526016,-!p1@RFX3!0.33!10.55!RFX3;;chr1:8763440..8763460,-!p2@RERE!0.33!9.17!RERE;;chr3:101395936..101395962,-!p2@ZBTB11!0.33!6.88!ZBTB11;;chr1:151043216..151043256,+!p1@GABPB2!0.33!5.96!GABPB2;;chr10:44070016..44070069,-!p1@ZNF239!0.33!5.05!ZNF239;;chr18:47808120..47808171,-!p2@MBD1!0.33!4.13!MBD1;;chr6:157098579..157098634,+!p4@ARID1B!0.33!3.67!ARID1B;;chr7:21467642..21467671,+!p2@SP4!0.33!3.67!SP4;;chr1:211432887..211432903,+!p4@RCOR3!0.33!3.67!RCOR3;;chr9:73028387..73028418,-!p4@KLF9!0.33!3.21!KLF9;;chr16:3185024..3185045,+!p2@ZNF213!0.33!2.75!ZNF213;;chr9:102584159..102584174,+!p2@NR4A3!0.33!2.75!NR4A3;;chr7:128577972..128578047,+!p1@IRF5!0.33!2.29!IRF5;;chr16:30582888..30582923,-!p3@ZNF688!0.33!2.29!ZNF688;;chr12:432372..432377,-!p3@KDM5A!0.33!2.29!KDM5A;;chr9:2017159..2017186,+!p12@SMARCA2!0.33!1.83!SMARCA2;;chr4:87968291..87968314,+!p14@AFF1!0.33!1.83!AFF1;;chr19:13136241..13136258,+!p7@NFIX!0.33!1.83!NFIX;;chr6:45390343..45390388,+!p10@RUNX2!0.33!1.83!RUNX2;;chr6:126240463..126240489,+!p6@NCOA7!0.33!1.38!NCOA7;;chr13:74708246..74708264,-!p8@KLF12!0.33!1.38!KLF12;;chr14:35872414..35872425,-!p7@NFKBIA!0.33!1.38!NFKBIA;;chr15:76629097..76629120,+!p2@ISL2!0.33!1.38!ISL2;;chr16:31454084..31454115,-!p1@ZNF843!0.33!1.38!ZNF843;;chr18:53068911..53068935,-!p4@TCF4!0.33!1.38!TCF4;;chr19:21579964..21579975,+!p2@ZNF493!0.33!1.38!ZNF493;;chr2:25565329..25565342,-!p6@DNMT3A!0.33!1.38!DNMT3A;;chr15:57025675..57025718,-!p1@ZNF280D!0.32!40.37!ZNF280D;;chr16:3930681..3930721,-!p1@CREBBP!0.32!33.03!CREBBP;;chr6:33168126..33168180,-!p2@RXRB!0.32!19.27!RXRB;;chr4:124374..124410,+!p2@ZNF718!0.32!19.27!ZNF718;;chr16:88519669..88519726,+!p1@ZFPM1!0.32!16.51!ZFPM1;;chr6:41514078..41514158,+!p1@FOXP4!0.32!16.51!FOXP4;;chr1:167190091..167190156,+!p1@POU2F1!0.32!14.22!POU2F1;;chr2:148778590..148778647,+!p2@MBD5!0.32!13.76!MBD5;;chr18:72265084..72265143,+!p1@ZNF407!0.32!13.76!ZNF407;;chr12:6798616..6798684,-!p2@ZNF384!0.32!12.39!ZNF384;;chr10:104154246..104154347,+!p3@NFKB2!0.32!11.01!NFKB2;;chr17:7382935..7382961,-!p2@ZBTB4!0.32!11.01!ZBTB4;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!0.32!10.09!ZNF10;;chr17:5015129..5015187,-!p1@ZNF232!0.32!9.63!ZNF232;;chr1:156470515..156470542,-!p2@MEF2D!0.32!9.17!MEF2D;;chr2:61108650..61108687,+!p2@REL!0.32!8.72!REL;;chr8:42698194..42698239,-!p2@THAP1!0.32!7.80!THAP1;;chr19:58962974..58963001,+!p1@ZNF324B!0.32!7.80!ZNF324B;;chr7:21467674..21467727,+!p1@SP4!0.32!6.88!SP4;;chr19:45252008..45252024,+!p2@BCL3!0.32!5.50!BCL3;;chr9:115818951..115819011,-!p1@ZFP37!0.32!5.05!ZFP37;;chr15:74833584..74833626,+!p1@ARID3B!0.32!3.67!ARID3B;;chr17:7492684..7492778,-!p2@SOX15!0.32!3.21!SOX15;;chr5:180288225..180288243,-!p3@ZFP62!0.32!3.21!ZFP62;;chr12:56575310..56575344,-!p3@SMARCC2!0.32!2.29!SMARCC2;;chr10:43134047..43134079,-!p3@ZNF33B!0.32!1.83!ZNF33B;;chr12:10865870..10865888,-!p6@CSDA!0.32!1.83!CSDA;;chr19:12444491..12444517,-!p4@ZNF563!0.32!1.83!ZNF563;;chr4:87857491..87857519,+!p10@AFF1!0.32!1.83!AFF1;;chr14:75894391..75894435,+!p2@JDP2!0.32!1.38!JDP2;;chr15:35280863..35280908,-!p3@ZNF770!0.32!1.38!ZNF770;;chr18:56530595..56530606,+!p11@ZNF532!0.32!1.38!ZNF532;;chr19:20844356..20844365,-!p3@ZNF626!0.32!1.38!ZNF626;;chr5:124082580..124082603,-!p4@ZNF608!0.32!1.38!ZNF608;;chr8:86089627..86089653,+!p3@E2F5!0.32!1.38!E2F5;;chr11:118307179..118307223,+!p1@MLL!0.31!55.96!MLL;;chr15:42783305..42783348,-!p1@ZFP106!0.31!28.90!ZFP106;;chrX:119384629..119384720,+!p1@ZBTB33!0.31!24.31!ZBTB33;;chr17:61920280..61920343,-!p2@SMARCD2!0.31!17.43!SMARCD2;;chr12:54020107..54020196,-!p1@ATF7!0.31!17.43!ATF7;;chr12:124873852..124873881,-!p3@NCOR2!0.31!10.55!NCOR2;;chr8:146228270..146228295,-!p1@ZNF252!0.31!9.63!ZNF252P;;chr6:12012170..12012245,+!p1@HIVEP1!0.31!8.72!HIVEP1;;chr6:143266297..143266356,-!p1@HIVEP2!0.31!8.26!HIVEP2;;chr10:97889784..97889827,+!p1@ZNF518A!0.31!8.26!ZNF518A;;chr19:11959532..11959593,+!p1@ZNF439!0.31!6.42!ZNF439;;chr19:53636125..53636178,-!p1@ZNF415!0.31!4.59!ZNF415;;chr21:34144115..34144138,-!p2@GCFC1!0.31!4.59!GCFC1;;chr19:59084872..59084920,-!p2@MZF1!0.31!4.13!MZF1;;chr19:9879350..9879419,-!p2@ZNF846!0.31!3.21!ZNF846;;chr7:150946015..150946070,-!p3@SMARCD3!0.31!3.21!SMARCD3;;chr8:60031619..60031676,-!p1@TOX!0.31!3.21!TOX;;chrX:134478026..134478052,-!p2@ZNF75D!0.31!3.21!ZNF75D;;chr14:64970670..64970712,-!p3@ZBTB25!0.31!3.21!ZBTB25;;chr12:53853054..53853092,+!p6@PCBP2!0.31!2.75!PCBP2;;chr9:102584128..102584144,+!p3@NR4A3!0.31!2.75!NR4A3;;chr8:71316428..71316459,-!p2@NCOA2!0.31!2.29!NCOA2;;chr9:14082760..14082775,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| 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OR3!0.33!35.32!RCOR3;;chr22:21356016..21356105,-!p1@THAP7!0.33!30.28!THAP7;;chr2:238536207..238536290,+!p2@LRRFIP1!0.33!18.35!LRRFIP1;;chr8:116681194..116681214,-!p1@TRPS1!0.33!17.43!TRPS1;;chr12:51566849..51566927,-!p1@TFCP2!0.33!16.06!TFCP2;;chr9:130186653..130186734,+!p1@ZNF79!0.33!13.76!ZNF79;;chr12:48744642..48744733,-!p1@ZNF641!0.33!12.39!ZNF641;;chr13:45151259..45151326,-!p2@TSC22D1!0.33!11.01!TSC22D1;;chr4:146859927..146860055,-!p1@ZNF827!0.33!11.01!ZNF827;;chr9:3525968..3526016,-!p1@RFX3!0.33!10.55!RFX3;;chr1:8763440..8763460,-!p2@RERE!0.33!9.17!RERE;;chr3:101395936..101395962,-!p2@ZBTB11!0.33!6.88!ZBTB11;;chr1:151043216..151043256,+!p1@GABPB2!0.33!5.96!GABPB2;;chr10:44070016..44070069,-!p1@ZNF239!0.33!5.05!ZNF239;;chr18:47808120..47808171,-!p2@MBD1!0.33!4.13!MBD1;;chr6:157098579..157098634,+!p4@ARID1B!0.33!3.67!ARID1B;;chr7:21467642..21467671,+!p2@SP4!0.33!3.67!SP4;;chr1:211432887..211432903,+!p4@RCOR3!0.33!3.67!RCOR3;;chr9:73028387..73028418,-!p4@KLF9!0.33!3.21!KLF9;;chr16:3185024..3185045,+!p2@ZNF213!0.33!2.75!ZNF213;;chr9:102584159..102584174,+!p2@NR4A3!0.33!2.75!NR4A3;;chr7:128577972..128578047,+!p1@IRF5!0.33!2.29!IRF5;;chr16:30582888..30582923,-!p3@ZNF688!0.33!2.29!ZNF688;;chr12:432372..432377,-!p3@KDM5A!0.33!2.29!KDM5A;;chr9:2017159..2017186,+!p12@SMARCA2!0.33!1.83!SMARCA2;;chr4:87968291..87968314,+!p14@AFF1!0.33!1.83!AFF1;;chr19:13136241..13136258,+!p7@NFIX!0.33!1.83!NFIX;;chr6:45390343..45390388,+!p10@RUNX2!0.33!1.83!RUNX2;;chr6:126240463..126240489,+!p6@NCOA7!0.33!1.38!NCOA7;;chr13:74708246..74708264,-!p8@KLF12!0.33!1.38!KLF12;;chr14:35872414..35872425,-!p7@NFKBIA!0.33!1.38!NFKBIA;;chr15:76629097..76629120,+!p2@ISL2!0.33!1.38!ISL2;;chr16:31454084..31454115,-!p1@ZNF843!0.33!1.38!ZNF843;;chr18:53068911..53068935,-!p4@TCF4!0.33!1.38!TCF4;;chr19:21579964..21579975,+!p2@ZNF493!0.33!1.38!ZNF493;;chr2:25565329..25565342,-!p6@DNMT3A!0.33!1.38!DNMT3A;;chr15:57025675..57025718,-!p1@ZNF280D!0.32!40.37!ZNF280D;;chr16:3930681..3930721,-!p1@CREBBP!0.32!33.03!CREBBP;;chr6:33168126..33168180,-!p2@RXRB!0.32!19.27!RXRB;;chr4:124374..124410,+!p2@ZNF718!0.32!19.27!ZNF718;;chr16:88519669..88519726,+!p1@ZFPM1!0.32!16.51!ZFPM1;;chr6:41514078..41514158,+!p1@FOXP4!0.32!16.51!FOXP4;;chr1:167190091..167190156,+!p1@POU2F1!0.32!14.22!POU2F1;;chr2:148778590..148778647,+!p2@MBD5!0.32!13.76!MBD5;;chr18:72265084..72265143,+!p1@ZNF407!0.32!13.76!ZNF407;;chr12:6798616..6798684,-!p2@ZNF384!0.32!12.39!ZNF384;;chr10:104154246..104154347,+!p3@NFKB2!0.32!11.01!NFKB2;;chr17:7382935..7382961,-!p2@ZBTB4!0.32!11.01!ZBTB4;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!0.32!10.09!ZNF10;;chr17:5015129..5015187,-!p1@ZNF232!0.32!9.63!ZNF232;;chr1:156470515..156470542,-!p2@MEF2D!0.32!9.17!MEF2D;;chr2:61108650..61108687,+!p2@REL!0.32!8.72!REL;;chr8:42698194..42698239,-!p2@THAP1!0.32!7.80!THAP1;;chr19:58962974..58963001,+!p1@ZNF324B!0.32!7.80!ZNF324B;;chr7:21467674..21467727,+!p1@SP4!0.32!6.88!SP4;;chr19:45252008..45252024,+!p2@BCL3!0.32!5.50!BCL3;;chr9:115818951..115819011,-!p1@ZFP37!0.32!5.05!ZFP37;;chr15:74833584..74833626,+!p1@ARID3B!0.32!3.67!ARID3B;;chr17:7492684..7492778,-!p2@SOX15!0.32!3.21!SOX15;;chr5:180288225..180288243,-!p3@ZFP62!0.32!3.21!ZFP62;;chr12:56575310..56575344,-!p3@SMARCC2!0.32!2.29!SMARCC2;;chr10:43134047..43134079,-!p3@ZNF33B!0.32!1.83!ZNF33B;;chr12:10865870..10865888,-!p6@CSDA!0.32!1.83!CSDA;;chr19:12444491..12444517,-!p4@ZNF563!0.32!1.83!ZNF563;;chr4:87857491..87857519,+!p10@AFF1!0.32!1.83!AFF1;;chr14:75894391..75894435,+!p2@JDP2!0.32!1.38!JDP2;;chr15:35280863..35280908,-!p3@ZNF770!0.32!1.38!ZNF770;;chr18:56530595..56530606,+!p11@ZNF532!0.32!1.38!ZNF532;;chr19:20844356..20844365,-!p3@ZNF626!0.32!1.38!ZNF626;;chr5:124082580..124082603,-!p4@ZNF608!0.32!1.38!ZNF608;;chr8:86089627..86089653,+!p3@E2F5!0.32!1.38!E2F5;;chr11:118307179..118307223,+!p1@MLL!0.31!55.96!MLL;;chr15:42783305..42783348,-!p1@ZFP106!0.31!28.90!ZFP106;;chrX:119384629..119384720,+!p1@ZBTB33!0.31!24.31!ZBTB33;;chr17:61920280..61920343,-!p2@SMARCD2!0.31!17.43!SMARCD2;;chr12:54020107..54020196,-!p1@ATF7!0.31!17.43!ATF7;;chr12:124873852..124873881,-!p3@NCOR2!0.31!10.55!NCOR2;;chr8:146228270..146228295,-!p1@ZNF252!0.31!9.63!ZNF252P;;chr6:12012170..12012245,+!p1@HIVEP1!0.31!8.72!HIVEP1;;chr6:143266297..143266356,-!p1@HIVEP2!0.31!8.26!HIVEP2;;chr10:97889784..97889827,+!p1@ZNF518A!0.31!8.26!ZNF518A;;chr19:11959532..11959593,+!p1@ZNF439!0.31!6.42!ZNF439;;chr19:53636125..53636178,-!p1@ZNF415!0.31!4.59!ZNF415;;chr21:34144115..34144138,-!p2@GCFC1!0.31!4.59!GCFC1;;chr19:59084872..59084920,-!p2@MZF1!0.31!4.13!MZF1;;chr19:9879350..9879419,-!p2@ZNF846!0.31!3.21!ZNF846;;chr7:150946015..150946070,-!p3@SMARCD3!0.31!3.21!SMARCD3;;chr8:60031619..60031676,-!p1@TOX!0.31!3.21!TOX;;chrX:134478026..134478052,-!p2@ZNF75D!0.31!3.21!ZNF75D;;chr14:64970670..64970712,-!p3@ZBTB25!0.31!3.21!ZBTB25;;chr12:53853054..53853092,+!p6@PCBP2!0.31!2.75!PCBP2;;chr9:102584128..102584144,+!p3@NR4A3!0.31!2.75!NR4A3;;chr8:71316428..71316459,-!p2@NCOA2!0.31!2.29!NCOA2;;chr9:14082760..14082775,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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000165;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000166;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001044;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001829;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002365 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006595,UBERON:0006298,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 37: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10202-103F4 | |id=FF:10202-103F4 | ||
|is_a=EFO:0002091;;FF:0010202 | |is_a=EFO:0002091;;FF:0010202 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs12852 | |||
|library_id_phase_based=2:CNhs12852 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10202 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10202 | |||
|name=submaxillary gland, adult | |name=submaxillary gland, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 45: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12852,LSID973,release012,COMPLETED | |profile_hcage=CNhs12852,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234165-10 | |rna_catalog_number=R1234165-10 | ||
Line 59: | Line 78: | ||
|rna_tube_id=103F4 | |rna_tube_id=103F4 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age=24 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 75: | Line 95: | ||
|sample_id=10202 | |sample_id=10202 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=M | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
Line 81: | Line 101: | ||
|top_motifs=TFAP4:3.93984428208;ALX1:3.0191642277;MYOD1:2.53524486399;ARID5B:2.29539250871;SNAI1..3:2.27740742538;SOX5:2.17802407016;ZEB1:1.89166260563;LMO2:1.7742131138;ATF6:1.75080377152;NR5A1,2:1.62885156402;NR6A1:1.56079506172;MEF2{A,B,C,D}:1.50349075105;FOXA2:1.45036208463;HMX1:1.43338670252;TFAP2{A,C}:1.42171420155;TLX2:1.41830660563;POU6F1:1.35985859714;AR:1.30410789668;XBP1:1.28136238936;PAX6:1.1562095142;IRF7:1.1444621135;TGIF1:1.08965875059;ESR1:1.0633126347;SP1:1.03073533417;T:0.946440145655;SPZ1:0.8996466276;TFCP2:0.828794513525;NKX6-1,2:0.82078258214;NFE2L1:0.807968590225;NR1H4:0.800918399145;MAZ:0.796973533081;TBX4,5:0.786662684048;HES1:0.782147090582;TBP:0.765967698317;POU2F1..3:0.744293402665;EP300:0.720376644599;IKZF1:0.713205605767;HIC1:0.700884882504;LHX3,4:0.694895805208;AIRE:0.685883655719;BREu{core}:0.670643488077;FOXO1,3,4:0.665591998279;MYFfamily:0.594714420808;RXRA_VDR{dimer}:0.59452283671;TLX1..3_NFIC{dimer}:0.569518116485;NKX2-3_NKX2-5:0.564133322731;ETS1,2:0.549499313099;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.548644109717;NFATC1..3:0.535374863706;GCM1,2:0.533994998968;IKZF2:0.533140470518;FOXN1:0.508742613454;FOXL1:0.508512607854;IRF1,2:0.47708216862;PATZ1:0.475089071071;ZBTB6:0.446905012259;NFIL3:0.444669937996;TFAP2B:0.44352052801;ESRRA:0.442171117263;MTF1:0.404627649929;ELF1,2,4:0.366182422034;DMAP1_NCOR{1,2}_SMARC:0.366112175456;MTE{core}:0.362997846925;NFIX:0.349209929113;HAND1,2:0.347273962793;CDC5L:0.343491025102;REST:0.342180453968;SRF:0.335485817238;MAFB:0.326313302317;GTF2I:0.320724683148;ZIC1..3:0.301813815601;HOX{A4,D4}:0.29552237641;HOX{A6,A7,B6,B7}:0.285475067974;GATA4:0.276970286289;SMAD1..7,9:0.254283664357;CRX:0.24290089504;TAL1_TCF{3,4,12}:0.227854523576;RUNX1..3:0.208199564175;SPI1:0.204885387386;GTF2A1,2:0.204877216191;FOX{D1,D2}:0.203022185286;POU5F1:0.189255709916;ATF2:0.142262764641;ZFP161:0.137142533098;BPTF:0.118722148728;HIF1A:0.102516136032;NKX2-1,4:0.100183361674;TEAD1:0.0949126427046;PBX1:0.0672275863886;XCPE1{core}:0.052749500028;NHLH1,2:0.0363571390006;FOXP1:0.0351547930709;MED-1{core}:0.0289028929349;SPIB:0.0118245050808;CUX2:0.00839501226487;VSX1,2:0.00396390409338;STAT1,3:-0.00234900572251;MZF1:-0.0133102265695;EBF1:-0.0206962375322;TOPORS:-0.0297391176958;EGR1..3:-0.0389506466226;PDX1:-0.0400838839632;FOX{F1,F2,J1}:-0.0409941445402;ZNF148:-0.048975449115;GATA6:-0.0893605790971;NANOG:-0.0936870196361;RREB1:-0.10497809543;UFEwm:-0.116838642457;PITX1..3:-0.158217203147;FOXP3:-0.186001524358;HNF4A_NR2F1,2:-0.197400517524;PRDM1:-0.219435192885;ZNF384:-0.220187510576;FOXQ1:-0.222661767794;CEBPA,B_DDIT3:-0.240223460226;ZNF143:-0.24996475893;MYBL2:-0.251325944127;KLF4:-0.257554931988;GLI1..3:-0.257751080725;HOXA9_MEIS1:-0.259148159612;NKX3-1:-0.274989901384;LEF1_TCF7_TCF7L1,2:-0.282105027514;GFI1B:-0.286351180615;SOX{8,9,10}:-0.286872599596;SOX2:-0.295913713528;RBPJ:-0.301888322323;SOX17:-0.30460838293;PAX5:-0.331840499385;NFKB1_REL_RELA:-0.337869943888;bHLH_family:-0.340879859443;SREBF1,2:-0.342920902249;FOXM1:-0.352218383294;PPARG:-0.370906988717;ZBTB16:-0.372882922022;NKX3-2:-0.389919797664;ZNF238:-0.427902662948;TEF:-0.432887461603;HNF1A:-0.460556582498;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.463761690237;ALX4:-0.516404349307;POU1F1:-0.518031157564;FOX{I1,J2}:-0.556534106087;YY1:-0.565134162303;DBP:-0.582233053829;ADNP_IRX_SIX_ZHX:-0.613796215612;STAT2,4,6:-0.621861734672;NRF1:-0.629375139263;ZNF423:-0.634130532945;ATF5_CREB3:-0.634296655363;GZF1:-0.638632147311;PAX1,9:-0.655817806831;CREB1:-0.707292360239;GFI1:-0.72476009991;NFY{A,B,C}:-0.726281274332;HBP1_HMGB_SSRP1_UBTF:-0.752181806999;TP53:-0.756337734949;RFX1:-0.756769133854;STAT5{A,B}:-0.759189240646;CDX1,2,4:-0.772321395078;FOS_FOS{B,L1}_JUN{B,D}:-0.787713583209;PAX3,7:-0.791206894797;FOSL2:-0.795927202034;POU3F1..4:-0.807507079403;RXR{A,B,G}:-0.80868205409;ELK1,4_GABP{A,B1}:-0.850927074315;HMGA1,2:-0.854080292213;HLF:-0.862915875652;JUN:-0.867854612622;ONECUT1,2:-0.877534955367;ATF4:-0.889243311125;BACH2:-0.952134072845;NANOG{mouse}:-0.987298952835;OCT4_SOX2{dimer}:-1.00877185443;AHR_ARNT_ARNT2:-1.01882633189;RFX2..5_RFXANK_RFXAP:-1.0688066658;NFE2L2:-1.11716217647;TFDP1:-1.20143401581;E2F1..5:-1.2263651997;NFE2:-1.23895046031;NKX2-2,8:-1.24655976556;EN1,2:-1.26047132036;PRRX1,2:-1.26474561216;PAX2:-1.29366990976;HSF1,2:-1.38810743412;EVI1:-1.40602284184;RORA:-1.47493427897;MYB:-1.52887397522;PAX4:-1.68487653837;NR3C1:-1.73749125934;HOX{A5,B5}:-1.94225616909;FOXD3:-2.23509671024;PAX8:-2.83642563567 | |top_motifs=TFAP4:3.93984428208;ALX1:3.0191642277;MYOD1:2.53524486399;ARID5B:2.29539250871;SNAI1..3:2.27740742538;SOX5:2.17802407016;ZEB1:1.89166260563;LMO2:1.7742131138;ATF6:1.75080377152;NR5A1,2:1.62885156402;NR6A1:1.56079506172;MEF2{A,B,C,D}:1.50349075105;FOXA2:1.45036208463;HMX1:1.43338670252;TFAP2{A,C}:1.42171420155;TLX2:1.41830660563;POU6F1:1.35985859714;AR:1.30410789668;XBP1:1.28136238936;PAX6:1.1562095142;IRF7:1.1444621135;TGIF1:1.08965875059;ESR1:1.0633126347;SP1:1.03073533417;T:0.946440145655;SPZ1:0.8996466276;TFCP2:0.828794513525;NKX6-1,2:0.82078258214;NFE2L1:0.807968590225;NR1H4:0.800918399145;MAZ:0.796973533081;TBX4,5:0.786662684048;HES1:0.782147090582;TBP:0.765967698317;POU2F1..3:0.744293402665;EP300:0.720376644599;IKZF1:0.713205605767;HIC1:0.700884882504;LHX3,4:0.694895805208;AIRE:0.685883655719;BREu{core}:0.670643488077;FOXO1,3,4:0.665591998279;MYFfamily:0.594714420808;RXRA_VDR{dimer}:0.59452283671;TLX1..3_NFIC{dimer}:0.569518116485;NKX2-3_NKX2-5:0.564133322731;ETS1,2:0.549499313099;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.548644109717;NFATC1..3:0.535374863706;GCM1,2:0.533994998968;IKZF2:0.533140470518;FOXN1:0.508742613454;FOXL1:0.508512607854;IRF1,2:0.47708216862;PATZ1:0.475089071071;ZBTB6:0.446905012259;NFIL3:0.444669937996;TFAP2B:0.44352052801;ESRRA:0.442171117263;MTF1:0.404627649929;ELF1,2,4:0.366182422034;DMAP1_NCOR{1,2}_SMARC:0.366112175456;MTE{core}:0.362997846925;NFIX:0.349209929113;HAND1,2:0.347273962793;CDC5L:0.343491025102;REST:0.342180453968;SRF:0.335485817238;MAFB:0.326313302317;GTF2I:0.320724683148;ZIC1..3:0.301813815601;HOX{A4,D4}:0.29552237641;HOX{A6,A7,B6,B7}:0.285475067974;GATA4:0.276970286289;SMAD1..7,9:0.254283664357;CRX:0.24290089504;TAL1_TCF{3,4,12}:0.227854523576;RUNX1..3:0.208199564175;SPI1:0.204885387386;GTF2A1,2:0.204877216191;FOX{D1,D2}:0.203022185286;POU5F1:0.189255709916;ATF2:0.142262764641;ZFP161:0.137142533098;BPTF:0.118722148728;HIF1A:0.102516136032;NKX2-1,4:0.100183361674;TEAD1:0.0949126427046;PBX1:0.0672275863886;XCPE1{core}:0.052749500028;NHLH1,2:0.0363571390006;FOXP1:0.0351547930709;MED-1{core}:0.0289028929349;SPIB:0.0118245050808;CUX2:0.00839501226487;VSX1,2:0.00396390409338;STAT1,3:-0.00234900572251;MZF1:-0.0133102265695;EBF1:-0.0206962375322;TOPORS:-0.0297391176958;EGR1..3:-0.0389506466226;PDX1:-0.0400838839632;FOX{F1,F2,J1}:-0.0409941445402;ZNF148:-0.048975449115;GATA6:-0.0893605790971;NANOG:-0.0936870196361;RREB1:-0.10497809543;UFEwm:-0.116838642457;PITX1..3:-0.158217203147;FOXP3:-0.186001524358;HNF4A_NR2F1,2:-0.197400517524;PRDM1:-0.219435192885;ZNF384:-0.220187510576;FOXQ1:-0.222661767794;CEBPA,B_DDIT3:-0.240223460226;ZNF143:-0.24996475893;MYBL2:-0.251325944127;KLF4:-0.257554931988;GLI1..3:-0.257751080725;HOXA9_MEIS1:-0.259148159612;NKX3-1:-0.274989901384;LEF1_TCF7_TCF7L1,2:-0.282105027514;GFI1B:-0.286351180615;SOX{8,9,10}:-0.286872599596;SOX2:-0.295913713528;RBPJ:-0.301888322323;SOX17:-0.30460838293;PAX5:-0.331840499385;NFKB1_REL_RELA:-0.337869943888;bHLH_family:-0.340879859443;SREBF1,2:-0.342920902249;FOXM1:-0.352218383294;PPARG:-0.370906988717;ZBTB16:-0.372882922022;NKX3-2:-0.389919797664;ZNF238:-0.427902662948;TEF:-0.432887461603;HNF1A:-0.460556582498;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.463761690237;ALX4:-0.516404349307;POU1F1:-0.518031157564;FOX{I1,J2}:-0.556534106087;YY1:-0.565134162303;DBP:-0.582233053829;ADNP_IRX_SIX_ZHX:-0.613796215612;STAT2,4,6:-0.621861734672;NRF1:-0.629375139263;ZNF423:-0.634130532945;ATF5_CREB3:-0.634296655363;GZF1:-0.638632147311;PAX1,9:-0.655817806831;CREB1:-0.707292360239;GFI1:-0.72476009991;NFY{A,B,C}:-0.726281274332;HBP1_HMGB_SSRP1_UBTF:-0.752181806999;TP53:-0.756337734949;RFX1:-0.756769133854;STAT5{A,B}:-0.759189240646;CDX1,2,4:-0.772321395078;FOS_FOS{B,L1}_JUN{B,D}:-0.787713583209;PAX3,7:-0.791206894797;FOSL2:-0.795927202034;POU3F1..4:-0.807507079403;RXR{A,B,G}:-0.80868205409;ELK1,4_GABP{A,B1}:-0.850927074315;HMGA1,2:-0.854080292213;HLF:-0.862915875652;JUN:-0.867854612622;ONECUT1,2:-0.877534955367;ATF4:-0.889243311125;BACH2:-0.952134072845;NANOG{mouse}:-0.987298952835;OCT4_SOX2{dimer}:-1.00877185443;AHR_ARNT_ARNT2:-1.01882633189;RFX2..5_RFXANK_RFXAP:-1.0688066658;NFE2L2:-1.11716217647;TFDP1:-1.20143401581;E2F1..5:-1.2263651997;NFE2:-1.23895046031;NKX2-2,8:-1.24655976556;EN1,2:-1.26047132036;PRRX1,2:-1.26474561216;PAX2:-1.29366990976;HSF1,2:-1.38810743412;EVI1:-1.40602284184;RORA:-1.47493427897;MYB:-1.52887397522;PAX4:-1.68487653837;NR3C1:-1.73749125934;HOX{A5,B5}:-1.94225616909;FOXD3:-2.23509671024;PAX8:-2.83642563567 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10202-103F4;search_select_hide=table117:FF:10202-103F4 | |||
}} | }} |
Latest revision as of 13:56, 3 June 2020
Name: | submaxillary gland, adult |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12852 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12852
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12852
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.873 |
10 | 10 | 0.0502 |
100 | 100 | 0.749 |
101 | 101 | 0.791 |
102 | 102 | 0.596 |
103 | 103 | 0.93 |
104 | 104 | 0.161 |
105 | 105 | 0.0546 |
106 | 106 | 0.41 |
107 | 107 | 0.0477 |
108 | 108 | 0.1 |
109 | 109 | 0.381 |
11 | 11 | 0.807 |
110 | 110 | 0.465 |
111 | 111 | 0.659 |
112 | 112 | 0.158 |
113 | 113 | 0.469 |
114 | 114 | 0.817 |
115 | 115 | 0.622 |
116 | 116 | 0.271 |
117 | 117 | 0.14 |
118 | 118 | 0.0843 |
119 | 119 | 0.159 |
12 | 12 | 0.316 |
120 | 120 | 0.068 |
121 | 121 | 0.994 |
122 | 122 | 0.51 |
123 | 123 | 0.545 |
124 | 124 | 0.521 |
125 | 125 | 0.788 |
126 | 126 | 0.0875 |
127 | 127 | 0.369 |
128 | 128 | 0.0691 |
129 | 129 | 0.616 |
13 | 13 | 0.461 |
130 | 130 | 0.445 |
131 | 131 | 0.866 |
132 | 132 | 0.0584 |
133 | 133 | 0.232 |
134 | 134 | 0.0156 |
135 | 135 | 0.867 |
136 | 136 | 0.81 |
137 | 137 | 0.509 |
138 | 138 | 0.343 |
139 | 139 | 0.212 |
14 | 14 | 0.446 |
140 | 140 | 0.4 |
141 | 141 | 0.431 |
142 | 142 | 0.978 |
143 | 143 | 0.419 |
144 | 144 | 0.569 |
145 | 145 | 0.314 |
146 | 146 | 0.0846 |
147 | 147 | 0.689 |
148 | 148 | 0.628 |
149 | 149 | 0.298 |
15 | 15 | 0.454 |
150 | 150 | 0.985 |
151 | 151 | 0.578 |
152 | 152 | 0.205 |
153 | 153 | 0.685 |
154 | 154 | 0.814 |
155 | 155 | 0.924 |
156 | 156 | 0.329 |
157 | 157 | 0.845 |
158 | 158 | 0.461 |
159 | 159 | 0.0285 |
16 | 16 | 0.619 |
160 | 160 | 0.666 |
161 | 161 | 0.637 |
162 | 162 | 0.214 |
163 | 163 | 0.257 |
164 | 164 | 0.277 |
165 | 165 | 0.719 |
166 | 166 | 0.673 |
167 | 167 | 0.0445 |
168 | 168 | 0.301 |
169 | 169 | 0.1 |
17 | 17 | 0.679 |
18 | 18 | 0.353 |
19 | 19 | 0.245 |
2 | 2 | 0.0149 |
20 | 20 | 0.0122 |
21 | 21 | 0.842 |
22 | 22 | 0.755 |
23 | 23 | 0.591 |
24 | 24 | 0.531 |
25 | 25 | 0.884 |
26 | 26 | 0.82 |
27 | 27 | 0.214 |
28 | 28 | 0.958 |
29 | 29 | 0.297 |
3 | 3 | 0.601 |
30 | 30 | 0.007 |
31 | 31 | 0.572 |
32 | 32 | 0.68 |
33 | 33 | 0.94 |
34 | 34 | 0.713 |
35 | 35 | 0.675 |
36 | 36 | 0.00384 |
37 | 37 | 0.487 |
38 | 38 | 0.524 |
39 | 39 | 0.413 |
4 | 4 | 0.575 |
40 | 40 | 0.153 |
41 | 41 | 0.0923 |
42 | 42 | 0.411 |
43 | 43 | 0.941 |
44 | 44 | 0.106 |
45 | 45 | 0.134 |
46 | 46 | 0.935 |
47 | 47 | 0.726 |
48 | 48 | 0.904 |
49 | 49 | 0.605 |
5 | 5 | 0.336 |
50 | 50 | 0.723 |
51 | 51 | 0.81 |
52 | 52 | 0.193 |
53 | 53 | 0.982 |
54 | 54 | 0.904 |
55 | 55 | 0.45 |
56 | 56 | 0.754 |
57 | 57 | 0.758 |
58 | 58 | 0.559 |
59 | 59 | 0.198 |
6 | 6 | 0.433 |
60 | 60 | 0.313 |
61 | 61 | 0.55 |
62 | 62 | 0.888 |
63 | 63 | 0.387 |
64 | 64 | 0.85 |
65 | 65 | 0.516 |
66 | 66 | 0.103 |
67 | 67 | 0.502 |
68 | 68 | 0.274 |
69 | 69 | 0.394 |
7 | 7 | 0.823 |
70 | 70 | 0.311 |
71 | 71 | 0.246 |
72 | 72 | 0.362 |
73 | 73 | 0.757 |
74 | 74 | 0.901 |
75 | 75 | 0.15 |
76 | 76 | 0.117 |
77 | 77 | 0.00191 |
78 | 78 | 0.277 |
79 | 79 | 0.66 |
8 | 8 | 0.667 |
80 | 80 | 0.956 |
81 | 81 | 0.0467 |
82 | 82 | 0.657 |
83 | 83 | 0.476 |
84 | 84 | 0.638 |
85 | 85 | 0.0536 |
86 | 86 | 0.693 |
87 | 87 | 0.973 |
88 | 88 | 0.704 |
89 | 89 | 0.181 |
9 | 9 | 0.912 |
90 | 90 | 0.892 |
91 | 91 | 0.668 |
92 | 92 | 0.395 |
93 | 93 | 0.204 |
94 | 94 | 0.0659 |
95 | 95 | 0.0342 |
96 | 96 | 0.283 |
97 | 97 | 0.218 |
98 | 98 | 0.593 |
99 | 99 | 0.234 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12852
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010202 human submaxillary gland - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001044 (saliva-secreting gland)
0001736 (submandibular gland)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000161 (orifice)
0001444 (subdivision of head)
0002553 (anatomical cavity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003293 (gland of oral region)
0003294 (gland of foregut)
0001829 (major salivary gland)
0002365 (exocrine gland)
0000464 (anatomical space)
0002530 (gland)
0010047 (oral gland)
0003408 (gland of gut)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0001041 (foregut)
0000166 (oral opening)
0000167 (oral cavity)
0002330 (exocrine system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010202 (human submaxillary gland - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006595 (presumptive endoderm)
UBERON:0006298 (submandibular gland primordium)
UBERON:0010316 (germ layer / neural crest)