FF:10410-106B5: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005690 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005690 | ||
|ancestors_in_disease_facet=DOID: | |HumanCAGEScanFiles=NCig10065;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep1.NCig10065.10410-106B5.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep1.NCig10065.10410-106B5.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep1.NCig10065.10410-106B5.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep1.NCig10065.10410-106B5.hg19.GCTATA.pairs.bed.gz!NCig10129;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep2.NCig10129.10410-106B5.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep2.NCig10129.10410-106B5.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep2.NCig10129.10410-106B5.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS%252c%2520tech_rep2.NCig10129.10410-106B5.hg19.GCTATA.pairs.bed.gz | ||
|accession_numbers=CAGE;DRX007885;DRR008757;DRZ000182;DRZ001567;DRZ011532;DRZ012917 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057118;DRR062877;DRZ007953 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001474,UBERON:0002384,UBERON:0002418,UBERON:0000479,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0004755,UBERON:0002204,UBERON:0001434 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0002320,CL:0002371,CL:0000499,CL:0000153,CL:0000667,CL:0000327,CL:0000447,CL:0000255,CL:0000138 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:201,DOID:0060100,DOID:1115,DOID:3371,DOID:4549,DOID:5861,DOID:6496 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100385,FF:0101574 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100385 | |fonse_cell_line=FF:0100385 | ||
|fonse_cell_line_closure=FF:0100385 | |fonse_cell_line_closure=FF:0100385 | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS.CNhs10728.10410-106B5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS.CNhs10728.10410-106B5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS.CNhs10728.10410-106B5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS.CNhs10728.10410-106B5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/extraskeletal%2520myxoid%2520chondrosarcoma%2520cell%2520line%253aH-EMC-SS.CNhs10728.10410-106B5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10410-106B5 | |id=FF:10410-106B5 | ||
|is_a=DOID:6496;;EFO:0002091;;FF: | |is_a=DOID:6496;;EFO:0002091;;FF:0000210;;FF:0101574 | ||
|is_obsolete= | |||
|library_id=CNhs10728 | |||
|library_id_phase_based=2:CNhs10728 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10410 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10410 | |||
|name=extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS | |name=extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 63: | ||
|profile_cagescan=NCig10065,,, | |profile_cagescan=NCig10065,,, | ||
|profile_hcage=CNhs10728,LSID691,release008,COMPLETED | |profile_hcage=CNhs10728,LSID691,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=106 | |rna_box=106 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 56: | Line 80: | ||
|rna_tube_id=106B5 | |rna_tube_id=106B5 | ||
|rna_weight_ug=92.2235 | |rna_weight_ug=92.2235 | ||
|rnaseq_library_id=RDhi10061 | |||
|sample_age=77 | |sample_age=77 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB0508 | |sample_cell_catalog=RCB0508 | ||
|sample_cell_line=H-EMC-SS | |sample_cell_line=H-EMC-SS | ||
| Line 69: | Line 95: | ||
|sample_ethnicity=J | |sample_ethnicity=J | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.6940332848657e-268!GO:0043231;intracellular membrane-bound organelle;3.32133464112457e-246!GO:0043227;membrane-bound organelle;5.29938845198754e-246!GO:0043226;organelle;6.73994450767813e-235!GO:0043229;intracellular organelle;2.11749472942628e-234!GO:0005737;cytoplasm;3.74586574183697e-147!GO:0044422;organelle part;1.64281695597329e-128!GO:0044446;intracellular organelle part;3.86099370619729e-127!GO:0005634;nucleus;1.54338576902677e-125!GO:0044444;cytoplasmic part;6.16859456754867e-113!GO:0044238;primary metabolic process;2.04997305926528e-109!GO:0044237;cellular metabolic process;2.35294121237504e-108!GO:0043170;macromolecule metabolic process;3.81080098025285e-107!GO:0032991;macromolecular complex;7.33088017383317e-92!GO:0010467;gene expression;5.67889860514591e-83!GO:0030529;ribonucleoprotein complex;5.74253206867345e-82!GO:0044428;nuclear part;9.83072365346881e-82!GO:0003723;RNA binding;1.89939145416854e-79!GO:0043283;biopolymer metabolic process;1.43781135169811e-78!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.53933601216144e-77!GO:0043233;organelle lumen;3.81663781195512e-77!GO:0031974;membrane-enclosed lumen;3.81663781195512e-77!GO:0003676;nucleic acid binding;7.00857935897717e-65!GO:0005739;mitochondrion;1.00777987127632e-57!GO:0006396;RNA processing;9.41047108536213e-56!GO:0005515;protein binding;4.53613899968209e-54!GO:0016070;RNA metabolic process;1.95868799828219e-53!GO:0031981;nuclear lumen;2.54470647379854e-51!GO:0015031;protein transport;5.01048031432667e-48!GO:0033036;macromolecule localization;1.79309481114852e-47!GO:0016043;cellular component organization and biogenesis;4.51093003861617e-46!GO:0031090;organelle membrane;1.0203110782026e-45!GO:0043234;protein complex;1.16506912712859e-44!GO:0016071;mRNA metabolic process;1.20279920979308e-44!GO:0005840;ribosome;2.15787293281856e-44!GO:0006412;translation;4.19942730466917e-43!GO:0008104;protein localization;8.32148970009113e-43!GO:0045184;establishment of protein localization;1.07042844366111e-42!GO:0008380;RNA splicing;3.2598618980384e-40!GO:0019538;protein metabolic process;7.06858688909337e-38!GO:0006397;mRNA processing;1.34378590883588e-37!GO:0003735;structural constituent of ribosome;7.84969371660813e-37!GO:0044429;mitochondrial part;1.01866268416153e-35!GO:0046907;intracellular transport;2.04872750032213e-35!GO:0044267;cellular protein metabolic process;3.76810546647934e-34!GO:0044260;cellular macromolecule metabolic process;6.37912397799357e-34!GO:0031967;organelle envelope;8.98380223683132e-34!GO:0031975;envelope;1.16530306082366e-33!GO:0033279;ribosomal subunit;1.16530306082366e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.12731735458502e-32!GO:0044249;cellular biosynthetic process;2.27365451412669e-32!GO:0005654;nucleoplasm;2.27365451412669e-32!GO:0009058;biosynthetic process;2.3344851327788e-31!GO:0006886;intracellular protein transport;3.78320279336333e-31!GO:0006996;organelle organization and biogenesis;5.14363350106921e-31!GO:0009059;macromolecule biosynthetic process;7.39699230644521e-31!GO:0005829;cytosol;2.5562147447236e-30!GO:0006259;DNA metabolic process;1.34063207347426e-28!GO:0005681;spliceosome;4.37519984045117e-28!GO:0065003;macromolecular complex assembly;1.13164611264507e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.43438090720723e-27!GO:0044451;nucleoplasm part;1.1268216980468e-25!GO:0022607;cellular component assembly;4.82396512227902e-24!GO:0051649;establishment of cellular localization;8.87818307761689e-24!GO:0051641;cellular localization;3.24366148089114e-23!GO:0000166;nucleotide binding;7.93243671898978e-23!GO:0005740;mitochondrial envelope;2.80039477003931e-22!GO:0006512;ubiquitin cycle;3.05354344908067e-21!GO:0019866;organelle inner membrane;4.77517329205061e-21!GO:0019222;regulation of metabolic process;5.71680152251129e-21!GO:0031966;mitochondrial membrane;5.99314801663348e-21!GO:0044445;cytosolic part;7.32345356413473e-21!GO:0006457;protein folding;9.3781423431835e-21!GO:0005730;nucleolus;1.96961993782517e-20!GO:0043228;non-membrane-bound organelle;5.07217184691446e-20!GO:0043232;intracellular non-membrane-bound organelle;5.07217184691446e-20!GO:0022618;protein-RNA complex assembly;1.94443379768189e-19!GO:0006350;transcription;2.57221594047988e-19!GO:0005743;mitochondrial inner membrane;5.91598407878294e-19!GO:0008135;translation factor activity, nucleic acid binding;1.42469270247675e-18!GO:0044265;cellular macromolecule catabolic process;1.55178223083189e-18!GO:0050794;regulation of cellular process;1.96631529160304e-18!GO:0031323;regulation of cellular metabolic process;2.75555051457565e-18!GO:0012505;endomembrane system;4.63388232368651e-18!GO:0017111;nucleoside-triphosphatase activity;5.68340893865748e-18!GO:0016874;ligase activity;7.3641166601602e-18!GO:0016462;pyrophosphatase activity;7.42771329993448e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.17354208483405e-17!GO:0006119;oxidative phosphorylation;1.26789252131234e-17!GO:0015934;large ribosomal subunit;1.27992994390518e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;1.63607868440871e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.15496617011458e-17!GO:0019941;modification-dependent protein catabolic process;3.21760800238457e-17!GO:0043632;modification-dependent macromolecule catabolic process;3.21760800238457e-17!GO:0010468;regulation of gene expression;4.6606026131653e-17!GO:0015935;small ribosomal subunit;5.00437965558994e-17!GO:0006605;protein targeting;5.23240634568963e-17!GO:0006511;ubiquitin-dependent protein catabolic process;6.03372727302583e-17!GO:0032774;RNA biosynthetic process;8.09668415130914e-17!GO:0008134;transcription factor binding;8.77739435942846e-17!GO:0044257;cellular protein catabolic process;8.77739435942846e-17!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.07419591937403e-16!GO:0006351;transcription, DNA-dependent;1.07419591937403e-16!GO:0043285;biopolymer catabolic process;1.1263056766648e-16!GO:0044455;mitochondrial membrane part;8.13406306730619e-16!GO:0009057;macromolecule catabolic process;1.76140810251828e-15!GO:0032553;ribonucleotide binding;1.77859106731849e-15!GO:0032555;purine ribonucleotide binding;1.77859106731849e-15!GO:0051276;chromosome organization and biogenesis;1.95884291223839e-15!GO:0031980;mitochondrial lumen;2.16008609940214e-15!GO:0005759;mitochondrial matrix;2.16008609940214e-15!GO:0006974;response to DNA damage stimulus;2.388104838823e-15!GO:0048770;pigment granule;4.15211974654367e-15!GO:0042470;melanosome;4.15211974654367e-15!GO:0031965;nuclear membrane;5.3227507839894e-15!GO:0005783;endoplasmic reticulum;5.87177748014309e-15!GO:0007049;cell cycle;7.43371830342292e-15!GO:0045449;regulation of transcription;8.93879616670688e-15!GO:0016604;nuclear body;1.4569944909488e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;1.71841643081737e-14!GO:0003677;DNA binding;1.91437530625407e-14!GO:0017076;purine nucleotide binding;2.85745218421718e-14!GO:0043412;biopolymer modification;2.86002952675714e-14!GO:0044432;endoplasmic reticulum part;3.05494389303836e-14!GO:0048193;Golgi vesicle transport;3.25846189557498e-14!GO:0044248;cellular catabolic process;3.9037740586378e-14!GO:0006355;regulation of transcription, DNA-dependent;4.77381268090817e-14!GO:0030163;protein catabolic process;5.72782946583832e-14!GO:0050789;regulation of biological process;6.11331547616447e-14!GO:0042254;ribosome biogenesis and assembly;6.22315890681415e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;6.22315890681415e-14!GO:0000375;RNA splicing, via transesterification reactions;6.22315890681415e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.22315890681415e-14!GO:0006323;DNA packaging;7.31292212589998e-14!GO:0051082;unfolded protein binding;8.0070001319846e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.02359068731575e-13!GO:0006366;transcription from RNA polymerase II promoter;1.29868450392871e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.75073509713402e-13!GO:0005794;Golgi apparatus;4.44216711265918e-13!GO:0006281;DNA repair;4.95318018233174e-13!GO:0016607;nuclear speck;6.30891122546543e-13!GO:0044453;nuclear membrane part;7.5311431317578e-13!GO:0005524;ATP binding;1.06740257315338e-12!GO:0005635;nuclear envelope;1.15764974234326e-12!GO:0003743;translation initiation factor activity;1.69454210873286e-12!GO:0032559;adenyl ribonucleotide binding;1.81876998643654e-12!GO:0016192;vesicle-mediated transport;1.88116722394997e-12!GO:0006913;nucleocytoplasmic transport;2.34931616723575e-12!GO:0016887;ATPase activity;3.55861375768867e-12!GO:0006413;translational initiation;3.93917737347136e-12!GO:0016568;chromatin modification;4.05896197104279e-12!GO:0004386;helicase activity;4.18240441177581e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.9530504718874e-12!GO:0051169;nuclear transport;5.01058752114034e-12!GO:0006403;RNA localization;5.50176694609089e-12!GO:0050657;nucleic acid transport;5.50176694609089e-12!GO:0051236;establishment of RNA localization;5.50176694609089e-12!GO:0050658;RNA transport;5.50176694609089e-12!GO:0005746;mitochondrial respiratory chain;5.6121137057732e-12!GO:0006464;protein modification process;5.9550856903311e-12!GO:0003712;transcription cofactor activity;8.71626285744912e-12!GO:0000502;proteasome complex (sensu Eukaryota);2.06354927822332e-11!GO:0005643;nuclear pore;2.52381767177946e-11!GO:0050136;NADH dehydrogenase (quinone) activity;3.02906926501728e-11!GO:0003954;NADH dehydrogenase activity;3.02906926501728e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.02906926501728e-11!GO:0030554;adenyl nucleotide binding;3.57175224621666e-11!GO:0006446;regulation of translational initiation;3.65938038128413e-11!GO:0043687;post-translational protein modification;4.02440175386067e-11!GO:0008565;protein transporter activity;4.02440175386067e-11!GO:0006399;tRNA metabolic process;5.09153274382339e-11!GO:0022402;cell cycle process;6.31892738580202e-11!GO:0005761;mitochondrial ribosome;9.3566993185519e-11!GO:0000313;organellar ribosome;9.3566993185519e-11!GO:0042623;ATPase activity, coupled;1.83298188160864e-10!GO:0008026;ATP-dependent helicase activity;2.30906924038883e-10!GO:0065002;intracellular protein transport across a membrane;2.35884524254944e-10!GO:0005694;chromosome;3.79454935293333e-10!GO:0017038;protein import;4.80610660208538e-10!GO:0042775;organelle ATP synthesis coupled electron transport;5.66885318316358e-10!GO:0042773;ATP synthesis coupled electron transport;5.66885318316358e-10!GO:0046930;pore complex;6.59127643281157e-10!GO:0051028;mRNA transport;7.96678964387595e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.77932663508176e-10!GO:0051186;cofactor metabolic process;9.03528967968242e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.11590041358624e-09!GO:0005789;endoplasmic reticulum membrane;1.41518881047039e-09!GO:0006260;DNA replication;1.42141817088845e-09!GO:0030964;NADH dehydrogenase complex (quinone);1.50175794412921e-09!GO:0045271;respiratory chain complex I;1.50175794412921e-09!GO:0005747;mitochondrial respiratory chain complex I;1.50175794412921e-09!GO:0008270;zinc ion binding;2.7926716991311e-09!GO:0009719;response to endogenous stimulus;2.96197514391996e-09!GO:0006364;rRNA processing;3.38327813548595e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.82258612296549e-09!GO:0000278;mitotic cell cycle;3.93475196365986e-09!GO:0016072;rRNA metabolic process;5.51075135101513e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.75076224541082e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.82441934055109e-09!GO:0004812;aminoacyl-tRNA ligase activity;8.82441934055109e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.82441934055109e-09!GO:0008639;small protein conjugating enzyme activity;1.15882895089981e-08!GO:0044427;chromosomal part;1.56704923221089e-08!GO:0004842;ubiquitin-protein ligase activity;1.72579394642232e-08!GO:0005768;endosome;2.0222454453047e-08!GO:0065007;biological regulation;2.05220328697091e-08!GO:0043038;amino acid activation;2.15564202260682e-08!GO:0006418;tRNA aminoacylation for protein translation;2.15564202260682e-08!GO:0043039;tRNA aminoacylation;2.15564202260682e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.85562776431533e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.46198040486351e-08!GO:0043566;structure-specific DNA binding;3.82275821702814e-08!GO:0019787;small conjugating protein ligase activity;5.43783479015592e-08!GO:0006732;coenzyme metabolic process;5.73772105239679e-08!GO:0005793;ER-Golgi intermediate compartment;6.87837954476512e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.11999610381578e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.14954361509747e-08!GO:0006163;purine nucleotide metabolic process;8.44883328851027e-08!GO:0009259;ribonucleotide metabolic process;9.32384046695352e-08!GO:0005667;transcription factor complex;9.82025870600722e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.01567944824689e-07!GO:0051726;regulation of cell cycle;1.24939299751644e-07!GO:0016564;transcription repressor activity;1.28040405925776e-07!GO:0000074;regulation of progression through cell cycle;1.33350913745555e-07!GO:0009056;catabolic process;1.4944893956906e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.54439379897032e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.60392346182446e-07!GO:0006164;purine nucleotide biosynthetic process;1.61974443662063e-07!GO:0031324;negative regulation of cellular metabolic process;2.39388295003062e-07!GO:0044431;Golgi apparatus part;2.70074559354643e-07!GO:0065004;protein-DNA complex assembly;2.75576760142595e-07!GO:0051301;cell division;2.77938461125557e-07!GO:0016881;acid-amino acid ligase activity;3.16807492001713e-07!GO:0015986;ATP synthesis coupled proton transport;3.44136394389117e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.44136394389117e-07!GO:0009150;purine ribonucleotide metabolic process;3.49281106915226e-07!GO:0005788;endoplasmic reticulum lumen;3.72418935799849e-07!GO:0009260;ribonucleotide biosynthetic process;4.15950479943959e-07!GO:0003697;single-stranded DNA binding;4.70337070778921e-07!GO:0006333;chromatin assembly or disassembly;4.78719807705417e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.43142066140498e-07!GO:0009152;purine ribonucleotide biosynthetic process;6.79985360609541e-07!GO:0006606;protein import into nucleus;6.89507706733171e-07!GO:0016563;transcription activator activity;8.11864041917826e-07!GO:0006461;protein complex assembly;8.88243459878545e-07!GO:0000245;spliceosome assembly;9.36024716359844e-07!GO:0019829;cation-transporting ATPase activity;9.53110918269029e-07!GO:0046914;transition metal ion binding;9.73603944967658e-07!GO:0048523;negative regulation of cellular process;9.99703215592994e-07!GO:0032446;protein modification by small protein conjugation;1.00476142832261e-06!GO:0051170;nuclear import;1.05418001300213e-06!GO:0009892;negative regulation of metabolic process;1.45271175910756e-06!GO:0009060;aerobic respiration;1.51507957575785e-06!GO:0000151;ubiquitin ligase complex;1.57220646783882e-06!GO:0016481;negative regulation of transcription;1.6631631673789e-06!GO:0044440;endosomal part;1.80037654774994e-06!GO:0010008;endosome membrane;1.80037654774994e-06!GO:0012501;programmed cell death;2.01509527254901e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.12273585647529e-06!GO:0048475;coated membrane;2.16963154459532e-06!GO:0030117;membrane coat;2.16963154459532e-06!GO:0016779;nucleotidyltransferase activity;2.21600403764975e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.48163883050379e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.56517695823645e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.56517695823645e-06!GO:0006915;apoptosis;2.76313843057912e-06!GO:0006754;ATP biosynthetic process;3.05651195759582e-06!GO:0006753;nucleoside phosphate metabolic process;3.05651195759582e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.11995635666061e-06!GO:0016567;protein ubiquitination;3.18270784818368e-06!GO:0000785;chromatin;3.34946363204494e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.59668964900993e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.59668964900993e-06!GO:0045333;cellular respiration;3.64043852137049e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.0100831916755e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.33562078610439e-06!GO:0009144;purine nucleoside triphosphate metabolic process;4.33562078610439e-06!GO:0022403;cell cycle phase;4.45901760937805e-06!GO:0003713;transcription coactivator activity;4.57456825844361e-06!GO:0000087;M phase of mitotic cell cycle;4.66568445384273e-06!GO:0009141;nucleoside triphosphate metabolic process;5.2790386574123e-06!GO:0046034;ATP metabolic process;5.40529359537755e-06!GO:0051188;cofactor biosynthetic process;5.6683124884746e-06!GO:0045892;negative regulation of transcription, DNA-dependent;5.6683124884746e-06!GO:0015078;hydrogen ion transmembrane transporter activity;7.42614669025736e-06!GO:0007067;mitosis;7.71049243859417e-06!GO:0007005;mitochondrion organization and biogenesis;8.94271124302989e-06!GO:0051427;hormone receptor binding;9.11965162646979e-06!GO:0030120;vesicle coat;9.18752478880362e-06!GO:0030662;coated vesicle membrane;9.18752478880362e-06!GO:0003714;transcription corepressor activity;9.35919736808007e-06!GO:0008654;phospholipid biosynthetic process;1.17880741184896e-05!GO:0006613;cotranslational protein targeting to membrane;1.22846992280966e-05!GO:0005770;late endosome;1.36991278959523e-05!GO:0003702;RNA polymerase II transcription factor activity;1.40618880978376e-05!GO:0008219;cell death;1.47072179666836e-05!GO:0016265;death;1.47072179666836e-05!GO:0003924;GTPase activity;1.55929610550197e-05!GO:0003724;RNA helicase activity;1.70776160094228e-05!GO:0035257;nuclear hormone receptor binding;1.85493218224018e-05!GO:0016740;transferase activity;2.26622901172046e-05!GO:0048519;negative regulation of biological process;2.59185571937743e-05!GO:0005798;Golgi-associated vesicle;2.60143278796523e-05!GO:0045259;proton-transporting ATP synthase complex;2.65599051628309e-05!GO:0005769;early endosome;2.9183745860331e-05!GO:0015630;microtubule cytoskeleton;3.11999429208759e-05!GO:0016363;nuclear matrix;3.45492408780498e-05!GO:0045786;negative regulation of progression through cell cycle;3.66659990412604e-05!GO:0000139;Golgi membrane;3.95208915490735e-05!GO:0009117;nucleotide metabolic process;4.16666444749177e-05!GO:0005525;GTP binding;4.55972981374526e-05!GO:0003729;mRNA binding;4.68528813673425e-05!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;5.06415480667859e-05!GO:0031982;vesicle;5.21144989818514e-05!GO:0006402;mRNA catabolic process;5.28139661495623e-05!GO:0006752;group transfer coenzyme metabolic process;5.33826375971606e-05!GO:0009108;coenzyme biosynthetic process;6.06860965701758e-05!GO:0006099;tricarboxylic acid cycle;6.23765746678024e-05!GO:0046356;acetyl-CoA catabolic process;6.23765746678024e-05!GO:0031988;membrane-bound vesicle;6.6435295660818e-05!GO:0043623;cellular protein complex assembly;7.24185508713775e-05!GO:0031410;cytoplasmic vesicle;7.43046663645813e-05!GO:0051168;nuclear export;7.43054973731539e-05!GO:0048471;perinuclear region of cytoplasm;8.07069448032904e-05!GO:0003899;DNA-directed RNA polymerase activity;8.14977826569172e-05!GO:0006352;transcription initiation;8.93369897252983e-05!GO:0016023;cytoplasmic membrane-bound vesicle;9.27891314057768e-05!GO:0003690;double-stranded DNA binding;0.000126576985074357!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000129601004575329!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000149311148248652!GO:0045454;cell redox homeostasis;0.00015269472732271!GO:0043021;ribonucleoprotein binding;0.000152967030998843!GO:0006261;DNA-dependent DNA replication;0.000155363044322439!GO:0016859;cis-trans isomerase activity;0.000158502151634032!GO:0005048;signal sequence binding;0.000158502151634032!GO:0006084;acetyl-CoA metabolic process;0.000159748706059358!GO:0003746;translation elongation factor activity;0.000215438530388001!GO:0051789;response to protein stimulus;0.000224224999101409!GO:0006986;response to unfolded protein;0.000224224999101409!GO:0005773;vacuole;0.00023652317532919!GO:0006793;phosphorus metabolic process;0.000251921385352243!GO:0006796;phosphate metabolic process;0.000251921385352243!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000278181182409011!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000288237572269367!GO:0045045;secretory pathway;0.000300097121663047!GO:0043069;negative regulation of programmed cell death;0.000302399234677183!GO:0008250;oligosaccharyl transferase complex;0.000309147642612057!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000309694847282102!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000317221040858247!GO:0000279;M phase;0.000317221040858247!GO:0006401;RNA catabolic process;0.000318132295842741!GO:0051246;regulation of protein metabolic process;0.000323646590116865!GO:0005813;centrosome;0.000330460627616903!GO:0046489;phosphoinositide biosynthetic process;0.000345146482730135!GO:0016853;isomerase activity;0.000352490362710955!GO:0043066;negative regulation of apoptosis;0.000355396246567674!GO:0009109;coenzyme catabolic process;0.000360319906864827!GO:0008033;tRNA processing;0.000362311880440045!GO:0000059;protein import into nucleus, docking;0.000374359806190572!GO:0006414;translational elongation;0.000389775252109145!GO:0006916;anti-apoptosis;0.000416643199612131!GO:0030867;rough endoplasmic reticulum membrane;0.000428061610311213!GO:0042981;regulation of apoptosis;0.00042883393436768!GO:0016251;general RNA polymerase II transcription factor activity;0.000432299074261638!GO:0008186;RNA-dependent ATPase activity;0.000445639292441674!GO:0004576;oligosaccharyl transferase activity;0.000461150374988705!GO:0006839;mitochondrial transport;0.000461906976967107!GO:0043067;regulation of programmed cell death;0.000498928584552667!GO:0006338;chromatin remodeling;0.000520792937664848!GO:0006612;protein targeting to membrane;0.000530065042144694!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000533277812841931!GO:0006891;intra-Golgi vesicle-mediated transport;0.000550434360646704!GO:0005762;mitochondrial large ribosomal subunit;0.00057084887070516!GO:0000315;organellar large ribosomal subunit;0.00057084887070516!GO:0005815;microtubule organizing center;0.000573576444399262!GO:0016787;hydrolase activity;0.000576672817819554!GO:0000049;tRNA binding;0.000582523103365962!GO:0046474;glycerophospholipid biosynthetic process;0.000589606095918594!GO:0031497;chromatin assembly;0.000638246650713584!GO:0032561;guanyl ribonucleotide binding;0.000659712399752684!GO:0019001;guanyl nucleotide binding;0.000659712399752684!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00071640354936953!GO:0044452;nucleolar part;0.00072723247253849!GO:0019899;enzyme binding;0.000734758411334116!GO:0009055;electron carrier activity;0.000802528194834345!GO:0051187;cofactor catabolic process;0.000812505075689081!GO:0046519;sphingoid metabolic process;0.000893693078873703!GO:0006383;transcription from RNA polymerase III promoter;0.000924939522553795!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000928704905768352!GO:0009165;nucleotide biosynthetic process;0.000939825738286798!GO:0031072;heat shock protein binding;0.00096704919523381!GO:0016741;transferase activity, transferring one-carbon groups;0.000985196174919097!GO:0008168;methyltransferase activity;0.00106295009081935!GO:0051087;chaperone binding;0.00107336965544814!GO:0043681;protein import into mitochondrion;0.00109136845286375!GO:0051329;interphase of mitotic cell cycle;0.00113450940798673!GO:0018196;peptidyl-asparagine modification;0.00119013969055752!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00119013969055752!GO:0051325;interphase;0.00130128980538049!GO:0007006;mitochondrial membrane organization and biogenesis;0.00130128980538049!GO:0004004;ATP-dependent RNA helicase activity;0.00130128980538049!GO:0000323;lytic vacuole;0.0013616363419597!GO:0005764;lysosome;0.0013616363419597!GO:0003682;chromatin binding;0.00138043732825621!GO:0005839;proteasome core complex (sensu Eukaryota);0.00138887998811933!GO:0006611;protein export from nucleus;0.00146479472659125!GO:0046467;membrane lipid biosynthetic process;0.00146988982530412!GO:0006672;ceramide metabolic process;0.00150717776050491!GO:0006334;nucleosome assembly;0.00164764092864418!GO:0006497;protein amino acid lipidation;0.00165059370482959!GO:0051920;peroxiredoxin activity;0.00165570927962031!GO:0005905;coated pit;0.00167502382900664!GO:0033116;ER-Golgi intermediate compartment membrane;0.00170434032601693!GO:0048500;signal recognition particle;0.00176366022606684!GO:0006626;protein targeting to mitochondrion;0.00177780530775411!GO:0051252;regulation of RNA metabolic process;0.00177780530775411!GO:0019783;small conjugating protein-specific protease activity;0.00197799660137569!GO:0000314;organellar small ribosomal subunit;0.00198596022094777!GO:0005763;mitochondrial small ribosomal subunit;0.00198596022094777!GO:0030134;ER to Golgi transport vesicle;0.00209492196159987!GO:0003711;transcription elongation regulator activity;0.00213474883502969!GO:0015631;tubulin binding;0.00217955866080084!GO:0019843;rRNA binding;0.00218285472017804!GO:0005885;Arp2/3 protein complex;0.00228337140807739!GO:0004843;ubiquitin-specific protease activity;0.00252671260943468!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00252736289453331!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00252736289453331!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00252736289453331!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00270702498004871!GO:0032200;telomere organization and biogenesis;0.00274011270781609!GO:0000723;telomere maintenance;0.00274011270781609!GO:0007050;cell cycle arrest;0.00282594455929701!GO:0007004;telomere maintenance via telomerase;0.0029112362251886!GO:0030384;phosphoinositide metabolic process;0.00297987241737411!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00301718155967224!GO:0043488;regulation of mRNA stability;0.00301718155967224!GO:0043487;regulation of RNA stability;0.00301718155967224!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00307539947834251!GO:0016310;phosphorylation;0.0031135460615022!GO:0005637;nuclear inner membrane;0.00332168670834388!GO:0030518;steroid hormone receptor signaling pathway;0.00334413522607338!GO:0003684;damaged DNA binding;0.00340352315967129!GO:0004221;ubiquitin thiolesterase activity;0.00362562507029329!GO:0008312;7S RNA binding;0.00363903665566041!GO:0006506;GPI anchor biosynthetic process;0.00367013648388671!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00368981696377047!GO:0031124;mRNA 3'-end processing;0.00369594592880989!GO:0048487;beta-tubulin binding;0.00386908872756805!GO:0031252;leading edge;0.00386908872756805!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00387848128838918!GO:0045047;protein targeting to ER;0.00387848128838918!GO:0015980;energy derivation by oxidation of organic compounds;0.00387848128838918!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00388141527488141!GO:0007033;vacuole organization and biogenesis;0.00393142922315999!GO:0006405;RNA export from nucleus;0.0039409367023559!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00404246501792437!GO:0015399;primary active transmembrane transporter activity;0.00404246501792437!GO:0046983;protein dimerization activity;0.00406431474177203!GO:0030127;COPII vesicle coat;0.00413780146202214!GO:0012507;ER to Golgi transport vesicle membrane;0.00413780146202214!GO:0031902;late endosome membrane;0.00426853165176054!GO:0030658;transport vesicle membrane;0.00429879506862544!GO:0008287;protein serine/threonine phosphatase complex;0.00440216998675765!GO:0003678;DNA helicase activity;0.00440216998675765!GO:0016790;thiolester hydrolase activity;0.00445148264226285!GO:0006505;GPI anchor metabolic process;0.00445825987232477!GO:0045941;positive regulation of transcription;0.00448063406537263!GO:0005819;spindle;0.0046539669696381!GO:0004298;threonine endopeptidase activity;0.00476206221082916!GO:0045893;positive regulation of transcription, DNA-dependent;0.00479018946364284!GO:0006650;glycerophospholipid metabolic process;0.00482708241372776!GO:0030521;androgen receptor signaling pathway;0.00485653590808404!GO:0008022;protein C-terminus binding;0.00522936881356462!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00542974541431911!GO:0046966;thyroid hormone receptor binding;0.00550866259704332!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00550866259704332!GO:0006289;nucleotide-excision repair;0.00557596368862336!GO:0030027;lamellipodium;0.00567267179586832!GO:0006509;membrane protein ectodomain proteolysis;0.0057160395729571!GO:0033619;membrane protein proteolysis;0.0057160395729571!GO:0008601;protein phosphatase type 2A regulator activity;0.00579345295199931!GO:0045879;negative regulation of smoothened signaling pathway;0.00581910539026219!GO:0019867;outer membrane;0.00586640759698295!GO:0000781;chromosome, telomeric region;0.00593418603790886!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00607182782484897!GO:0005774;vacuolar membrane;0.00619902637653821!GO:0051287;NAD binding;0.0062374317078896!GO:0042158;lipoprotein biosynthetic process;0.00626524915882334!GO:0033673;negative regulation of kinase activity;0.00647101289609152!GO:0006469;negative regulation of protein kinase activity;0.00647101289609152!GO:0005684;U2-dependent spliceosome;0.00664632784214614!GO:0031968;organelle outer membrane;0.00693865804122449!GO:0000096;sulfur amino acid metabolic process;0.00709384490213506!GO:0007051;spindle organization and biogenesis;0.00733744730391529!GO:0030660;Golgi-associated vesicle membrane;0.00742029890996574!GO:0007264;small GTPase mediated signal transduction;0.00759619682432443!GO:0005669;transcription factor TFIID complex;0.00770108798610732!GO:0005741;mitochondrial outer membrane;0.00780727058850174!GO:0031123;RNA 3'-end processing;0.0081439841425151!GO:0030133;transport vesicle;0.00826906292643677!GO:0016197;endosome transport;0.0083118456541665!GO:0009451;RNA modification;0.00847796521418277!GO:0006278;RNA-dependent DNA replication;0.00848816803010293!GO:0007052;mitotic spindle organization and biogenesis;0.00864039227654549!GO:0006984;ER-nuclear signaling pathway;0.00950271409953452!GO:0009116;nucleoside metabolic process;0.00951087120825119!GO:0016584;nucleosome positioning;0.00956665959673503!GO:0006818;hydrogen transport;0.00962517073252572!GO:0006378;mRNA polyadenylation;0.00966271352006349!GO:0051348;negative regulation of transferase activity;0.00966271352006349!GO:0009303;rRNA transcription;0.00967445868203692!GO:0000339;RNA cap binding;0.00970397871446692!GO:0030137;COPI-coated vesicle;0.0105640513118758!GO:0015992;proton transport;0.0110599411772953!GO:0006144;purine base metabolic process;0.0111456618472205!GO:0008276;protein methyltransferase activity;0.0111900608000378!GO:0008139;nuclear localization sequence binding;0.0112309443976216!GO:0006302;double-strand break repair;0.0113676519778912!GO:0030663;COPI coated vesicle membrane;0.0120790206876007!GO:0030126;COPI vesicle coat;0.0120790206876007!GO:0032508;DNA duplex unwinding;0.0122568539983122!GO:0032392;DNA geometric change;0.0122568539983122!GO:0000159;protein phosphatase type 2A complex;0.0123124808773424!GO:0016272;prefoldin complex;0.0123124808773424!GO:0051098;regulation of binding;0.0124662381708165!GO:0006400;tRNA modification;0.0126212848219259!GO:0000075;cell cycle checkpoint;0.0126619067447158!GO:0040029;regulation of gene expression, epigenetic;0.0129416939877402!GO:0004674;protein serine/threonine kinase activity;0.0130722877761327!GO:0006607;NLS-bearing substrate import into nucleus;0.0131188414663081!GO:0005657;replication fork;0.0132414463449696!GO:0016407;acetyltransferase activity;0.0132517280582752!GO:0007040;lysosome organization and biogenesis;0.0133259020538239!GO:0016311;dephosphorylation;0.0133259020538239!GO:0016569;covalent chromatin modification;0.0135819662010869!GO:0035258;steroid hormone receptor binding;0.0138314786134712!GO:0030118;clathrin coat;0.0139398580173231!GO:0030880;RNA polymerase complex;0.0140518871159544!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0140518871159544!GO:0044437;vacuolar part;0.0141239282862256!GO:0043022;ribosome binding;0.014287334809091!GO:0006376;mRNA splice site selection;0.0147960406627839!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0147960406627839!GO:0008097;5S rRNA binding;0.0152638216155787!GO:0008652;amino acid biosynthetic process;0.0154444390132396!GO:0005832;chaperonin-containing T-complex;0.0155076052954835!GO:0031625;ubiquitin protein ligase binding;0.015588818996298!GO:0000775;chromosome, pericentric region;0.0156970724527446!GO:0016585;chromatin remodeling complex;0.0163112598496453!GO:0000082;G1/S transition of mitotic cell cycle;0.0164478547396013!GO:0051052;regulation of DNA metabolic process;0.0166867571533644!GO:0005765;lysosomal membrane;0.0166959795951105!GO:0030176;integral to endoplasmic reticulum membrane;0.0169115614061818!GO:0006892;post-Golgi vesicle-mediated transport;0.0170175147797939!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0170947913872696!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0171963130318065!GO:0032259;methylation;0.0171968205542166!GO:0005791;rough endoplasmic reticulum;0.0176158839405822!GO:0030508;thiol-disulfide exchange intermediate activity;0.0176326645147202!GO:0032940;secretion by cell;0.0176516521444238!GO:0043624;cellular protein complex disassembly;0.0178542587822507!GO:0046982;protein heterodimerization activity;0.0182559537734979!GO:0000097;sulfur amino acid biosynthetic process;0.0184934358635193!GO:0009112;nucleobase metabolic process;0.0185390249923052!GO:0003756;protein disulfide isomerase activity;0.0187750198102501!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0187750198102501!GO:0008094;DNA-dependent ATPase activity;0.018805495124222!GO:0016044;membrane organization and biogenesis;0.019054300791025!GO:0005869;dynactin complex;0.0193487491075021!GO:0000118;histone deacetylase complex;0.0198370922723818!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0198617122661533!GO:0007030;Golgi organization and biogenesis;0.0202601433381383!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0212749153732284!GO:0006310;DNA recombination;0.0212749153732284!GO:0000776;kinetochore;0.02132939458821!GO:0031901;early endosome membrane;0.0213719431176951!GO:0030149;sphingolipid catabolic process;0.0216965764824729!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0217443712346912!GO:0000209;protein polyubiquitination;0.0217444792202903!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0219066352622545!GO:0005874;microtubule;0.0219655877493296!GO:0006595;polyamine metabolic process;0.0224388142805555!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0227156595080093!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0227156595080093!GO:0006268;DNA unwinding during replication;0.0235499843775567!GO:0045947;negative regulation of translational initiation;0.0236639402856207!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0237584258578169!GO:0000428;DNA-directed RNA polymerase complex;0.0237584258578169!GO:0016791;phosphoric monoester hydrolase activity;0.0238141904856633!GO:0009067;aspartate family amino acid biosynthetic process;0.0240196384163703!GO:0046128;purine ribonucleoside metabolic process;0.024220606880909!GO:0042278;purine nucleoside metabolic process;0.024220606880909!GO:0032507;maintenance of cellular protein localization;0.0244005965278154!GO:0030522;intracellular receptor-mediated signaling pathway;0.0253198522372397!GO:0030132;clathrin coat of coated pit;0.0256629529349179!GO:0043492;ATPase activity, coupled to movement of substances;0.0256629529349179!GO:0032984;macromolecular complex disassembly;0.0258507650734849!GO:0030036;actin cytoskeleton organization and biogenesis;0.0267719422055781!GO:0050435;beta-amyloid metabolic process;0.0275934525343246!GO:0051452;cellular pH reduction;0.0278267416891562!GO:0051453;regulation of cellular pH;0.0278267416891562!GO:0045851;pH reduction;0.0278267416891562!GO:0008180;signalosome;0.027990691290072!GO:0004527;exonuclease activity;0.0288455851406515!GO:0007021;tubulin folding;0.0289548681102844!GO:0031461;cullin-RING ubiquitin ligase complex;0.0290191111998637!GO:0008017;microtubule binding;0.0290823892104473!GO:0000792;heterochromatin;0.0298222592295358!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0298222592295358!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0298222592295358!GO:0007034;vacuolar transport;0.0302948279438794!GO:0016570;histone modification;0.030314843368479!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0308526989352321!GO:0043414;biopolymer methylation;0.0309862921768926!GO:0016126;sterol biosynthetic process;0.0312244924333539!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0313474156260114!GO:0009066;aspartate family amino acid metabolic process;0.031375727861317!GO:0051101;regulation of DNA binding;0.0313942420839177!GO:0000123;histone acetyltransferase complex;0.0313942420839177!GO:0065009;regulation of a molecular function;0.0334011384291741!GO:0006564;L-serine biosynthetic process;0.0334011384291741!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0334590563243023!GO:0006516;glycoprotein catabolic process;0.0339373325460471!GO:0017134;fibroblast growth factor binding;0.0340750140060683!GO:0006284;base-excision repair;0.0341015360515672!GO:0042026;protein refolding;0.034203746866323!GO:0050811;GABA receptor binding;0.0343011928837867!GO:0051059;NF-kappaB binding;0.0350905730269943!GO:0022406;membrane docking;0.0356832591917154!GO:0048278;vesicle docking;0.0356832591917154!GO:0009956;radial pattern formation;0.0360895470347543!GO:0004722;protein serine/threonine phosphatase activity;0.0361139552577805!GO:0043284;biopolymer biosynthetic process;0.0372556644582791!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0373184992612345!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0373184992612345!GO:0030503;regulation of cell redox homeostasis;0.0383873965796668!GO:0006695;cholesterol biosynthetic process;0.0383873965796668!GO:0042802;identical protein binding;0.0386099893800955!GO:0004680;casein kinase activity;0.038794562253848!GO:0043631;RNA polyadenylation;0.0409366593527484!GO:0022890;inorganic cation transmembrane transporter activity;0.0422926010476984!GO:0008629;induction of apoptosis by intracellular signals;0.0422975618300098!GO:0008632;apoptotic program;0.0423285041097581!GO:0000922;spindle pole;0.0423438323630738!GO:0043241;protein complex disassembly;0.0427741657873661!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0431893865495562!GO:0004563;beta-N-acetylhexosaminidase activity;0.0432832698443488!GO:0051651;maintenance of cellular localization;0.0441630238469283!GO:0051539;4 iron, 4 sulfur cluster binding;0.0441690781239976!GO:0004532;exoribonuclease activity;0.0442218381489828!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0442218381489828!GO:0046483;heterocycle metabolic process;0.0446334521351376!GO:0008361;regulation of cell size;0.04491189327223!GO:0006643;membrane lipid metabolic process;0.0453943931087866!GO:0006354;RNA elongation;0.0469086051776618!GO:0000178;exosome (RNase complex);0.0488121834953172!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0488121834953172!GO:0000287;magnesium ion binding;0.0488121834953172!GO:0042393;histone binding;0.0494022154478776!GO:0004402;histone acetyltransferase activity;0.0495469739076476!GO:0004468;lysine N-acetyltransferase activity;0.0495469739076476!GO:0008408;3'-5' exonuclease activity;0.0496966211783799!GO:0005758;mitochondrial intermembrane space;0.0498237399108626 | |||
|sample_id=10410 | |sample_id=10410 | ||
|sample_note=machine failed, remainder reloaded, low amount | |sample_note=machine failed, remainder reloaded, low amount | ||
| Line 76: | Line 103: | ||
|sample_tissue=ANATOMICAL SYSTEM | |sample_tissue=ANATOMICAL SYSTEM | ||
|top_motifs=ONECUT1,2:2.80650326457;VSX1,2:2.03809659805;RORA:1.84989885395;NKX6-1,2:1.60990352387;SREBF1,2:1.58100135205;GATA4:1.51752165667;PAX4:1.48298420948;PAX8:1.37438939458;bHLH_family:1.35334578099;YY1:1.28959092358;EGR1..3:1.22660705012;ATF2:1.19517187566;HOX{A5,B5}:1.18577327131;SOX17:1.17747365904;AIRE:1.1724009245;CRX:1.12385765279;STAT1,3:1.10413157469;FOXN1:1.08509211841;FOXQ1:1.0189048147;NRF1:0.967927620957;TEF:0.937939067239;RREB1:0.935079061692;EVI1:0.92077056794;ATF4:0.902040241137;NANOG:0.899841882325;STAT5{A,B}:0.883450856431;TOPORS:0.876920324572;POU1F1:0.874302498575;ZNF143:0.85390929594;HIF1A:0.826099383512;NFIL3:0.810050084497;MZF1:0.806745354389;FOX{F1,F2,J1}:0.786269276416;LMO2:0.767987532211;CDX1,2,4:0.685018379215;RFX1:0.62734971104;JUN:0.571888973899;CUX2:0.571312239313;ADNP_IRX_SIX_ZHX:0.560832832364;ELK1,4_GABP{A,B1}:0.551716042906;HOX{A4,D4}:0.547705264644;TAL1_TCF{3,4,12}:0.546636043023;BREu{core}:0.540776599074;PATZ1:0.540332747701;HBP1_HMGB_SSRP1_UBTF:0.509795414911;MYB:0.485870125552;TLX2:0.480377500757;RFX2..5_RFXANK_RFXAP:0.4753743552;FOXD3:0.463764693731;ESR1:0.445404797094;GZF1:0.428862399102;AHR_ARNT_ARNT2:0.422042483316;ZNF384:0.417345974173;GATA6:0.41208894663;PRRX1,2:0.410149590092;NKX2-1,4:0.396920490296;SOX{8,9,10}:0.394326621353;TFAP2B:0.373491916358;FOXA2:0.370865235386;ZBTB6:0.367880002642;REST:0.352997874707;GTF2I:0.322031834104;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.3102354529;PAX1,9:0.302877896498;FOXP1:0.284516347135;GTF2A1,2:0.283203839373;RBPJ:0.259340868553;PITX1..3:0.23675044312;ZFP161:0.232819477682;GFI1:0.211192659662;SOX2:0.208940751739;ALX1:0.197094292868;MEF2{A,B,C,D}:0.191785804411;DMAP1_NCOR{1,2}_SMARC:0.184335925822;TFDP1:0.183391782254;NR5A1,2:0.182682947168;CEBPA,B_DDIT3:0.16629929968;ATF5_CREB3:0.152074204826;EP300:0.131963975723;CREB1:0.130353571668;FOX{D1,D2}:0.123541397607;LEF1_TCF7_TCF7L1,2:0.112575568123;HSF1,2:0.111786922473;SP1:0.103319002543;NR6A1:0.102176091445;PAX2:0.0744446618951;LHX3,4:0.0696794522246;HNF4A_NR2F1,2:0.0676492088504;HAND1,2:0.0552103053577;GFI1B:0.027884103909;FOXP3:0.0194682239709;HOXA9_MEIS1:0.00603684771303;MAZ:0.00330492352286;E2F1..5:-0.0121272727208;ATF6:-0.0150369276617;NKX2-2,8:-0.0327043423946;DBP:-0.0350327636125;TGIF1:-0.0527349363668;HLF:-0.0533448688157;TEAD1:-0.0855379162993;MED-1{core}:-0.0905989816386;PRDM1:-0.102612401693;ZBTB16:-0.103261089436;NFATC1..3:-0.123340982897;T:-0.131145432701;SOX5:-0.138462883795;ARID5B:-0.140557089069;SPZ1:-0.147921167578;TP53:-0.162564285399;NKX2-3_NKX2-5:-0.184712330797;NANOG{mouse}:-0.198491775071;NFY{A,B,C}:-0.200208536351;ZNF423:-0.216543136856;NKX3-2:-0.23041066355;ZNF148:-0.238305137998;FOS_FOS{B,L1}_JUN{B,D}:-0.240858323522;ELF1,2,4:-0.260398141372;MYOD1:-0.261680731267;IKZF1:-0.263371915387;NKX3-1:-0.27262303517;FOXM1:-0.273030591194;PPARG:-0.280853485164;OCT4_SOX2{dimer}:-0.283843588233;HNF1A:-0.319568924381;POU2F1..3:-0.321080244586;HMGA1,2:-0.332705960824;HIC1:-0.332830352791;TFAP4:-0.335402864872;SNAI1..3:-0.344047825589;TBX4,5:-0.347174107675;NR3C1:-0.361157110523;UFEwm:-0.362175804931;BACH2:-0.367577995918;MYBL2:-0.379954751684;EN1,2:-0.386775255307;SPI1:-0.391485622171;ZIC1..3:-0.411975620089;IKZF2:-0.41242750308;ZEB1:-0.41794950545;NFKB1_REL_RELA:-0.42313671439;MYFfamily:-0.440523439592;EBF1:-0.441446164998;SPIB:-0.467493365544;FOSL2:-0.482257984582;RUNX1..3:-0.491487415626;PAX5:-0.493418545585;MTF1:-0.51090545315;ZNF238:-0.524316436292;HMX1:-0.526036740274;KLF4:-0.536529022619;PAX3,7:-0.541961058427;NFE2:-0.559127000691;PBX1:-0.563894452679;IRF7:-0.57943999923;FOXL1:-0.596159061321;SRF:-0.630247760635;FOX{I1,J2}:-0.63059139382;CDC5L:-0.638083918803;BPTF:-0.644448228045;NR1H4:-0.700581967357;NHLH1,2:-0.706164447884;STAT2,4,6:-0.724806261529;ESRRA:-0.743240657305;TLX1..3_NFIC{dimer}:-0.7687107389;XCPE1{core}:-0.785243233115;GCM1,2:-0.793010266623;NFIX:-0.811658466452;POU6F1:-0.820010613508;TFCP2:-0.866164492062;XBP1:-0.881806711284;HOX{A6,A7,B6,B7}:-0.928587394076;TFAP2{A,C}:-0.935469686738;POU3F1..4:-0.939153456374;RXR{A,B,G}:-0.957742216546;ETS1,2:-0.967835541381;IRF1,2:-0.973372226602;MTE{core}:-0.989499021612;NFE2L2:-1.02234299004;AR:-1.03555222806;POU5F1:-1.03594277858;PAX6:-1.09464294228;FOXO1,3,4:-1.11582401486;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.16537604193;NFE2L1:-1.17517212606;ALX4:-1.20011151886;SMAD1..7,9:-1.33191905354;GLI1..3:-1.36891965131;PDX1:-1.41622340109;HES1:-1.42546211973;MAFB:-1.58491836973;TBP:-1.70612212965;RXRA_VDR{dimer}:-1.87743329322 | |top_motifs=ONECUT1,2:2.80650326457;VSX1,2:2.03809659805;RORA:1.84989885395;NKX6-1,2:1.60990352387;SREBF1,2:1.58100135205;GATA4:1.51752165667;PAX4:1.48298420948;PAX8:1.37438939458;bHLH_family:1.35334578099;YY1:1.28959092358;EGR1..3:1.22660705012;ATF2:1.19517187566;HOX{A5,B5}:1.18577327131;SOX17:1.17747365904;AIRE:1.1724009245;CRX:1.12385765279;STAT1,3:1.10413157469;FOXN1:1.08509211841;FOXQ1:1.0189048147;NRF1:0.967927620957;TEF:0.937939067239;RREB1:0.935079061692;EVI1:0.92077056794;ATF4:0.902040241137;NANOG:0.899841882325;STAT5{A,B}:0.883450856431;TOPORS:0.876920324572;POU1F1:0.874302498575;ZNF143:0.85390929594;HIF1A:0.826099383512;NFIL3:0.810050084497;MZF1:0.806745354389;FOX{F1,F2,J1}:0.786269276416;LMO2:0.767987532211;CDX1,2,4:0.685018379215;RFX1:0.62734971104;JUN:0.571888973899;CUX2:0.571312239313;ADNP_IRX_SIX_ZHX:0.560832832364;ELK1,4_GABP{A,B1}:0.551716042906;HOX{A4,D4}:0.547705264644;TAL1_TCF{3,4,12}:0.546636043023;BREu{core}:0.540776599074;PATZ1:0.540332747701;HBP1_HMGB_SSRP1_UBTF:0.509795414911;MYB:0.485870125552;TLX2:0.480377500757;RFX2..5_RFXANK_RFXAP:0.4753743552;FOXD3:0.463764693731;ESR1:0.445404797094;GZF1:0.428862399102;AHR_ARNT_ARNT2:0.422042483316;ZNF384:0.417345974173;GATA6:0.41208894663;PRRX1,2:0.410149590092;NKX2-1,4:0.396920490296;SOX{8,9,10}:0.394326621353;TFAP2B:0.373491916358;FOXA2:0.370865235386;ZBTB6:0.367880002642;REST:0.352997874707;GTF2I:0.322031834104;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.3102354529;PAX1,9:0.302877896498;FOXP1:0.284516347135;GTF2A1,2:0.283203839373;RBPJ:0.259340868553;PITX1..3:0.23675044312;ZFP161:0.232819477682;GFI1:0.211192659662;SOX2:0.208940751739;ALX1:0.197094292868;MEF2{A,B,C,D}:0.191785804411;DMAP1_NCOR{1,2}_SMARC:0.184335925822;TFDP1:0.183391782254;NR5A1,2:0.182682947168;CEBPA,B_DDIT3:0.16629929968;ATF5_CREB3:0.152074204826;EP300:0.131963975723;CREB1:0.130353571668;FOX{D1,D2}:0.123541397607;LEF1_TCF7_TCF7L1,2:0.112575568123;HSF1,2:0.111786922473;SP1:0.103319002543;NR6A1:0.102176091445;PAX2:0.0744446618951;LHX3,4:0.0696794522246;HNF4A_NR2F1,2:0.0676492088504;HAND1,2:0.0552103053577;GFI1B:0.027884103909;FOXP3:0.0194682239709;HOXA9_MEIS1:0.00603684771303;MAZ:0.00330492352286;E2F1..5:-0.0121272727208;ATF6:-0.0150369276617;NKX2-2,8:-0.0327043423946;DBP:-0.0350327636125;TGIF1:-0.0527349363668;HLF:-0.0533448688157;TEAD1:-0.0855379162993;MED-1{core}:-0.0905989816386;PRDM1:-0.102612401693;ZBTB16:-0.103261089436;NFATC1..3:-0.123340982897;T:-0.131145432701;SOX5:-0.138462883795;ARID5B:-0.140557089069;SPZ1:-0.147921167578;TP53:-0.162564285399;NKX2-3_NKX2-5:-0.184712330797;NANOG{mouse}:-0.198491775071;NFY{A,B,C}:-0.200208536351;ZNF423:-0.216543136856;NKX3-2:-0.23041066355;ZNF148:-0.238305137998;FOS_FOS{B,L1}_JUN{B,D}:-0.240858323522;ELF1,2,4:-0.260398141372;MYOD1:-0.261680731267;IKZF1:-0.263371915387;NKX3-1:-0.27262303517;FOXM1:-0.273030591194;PPARG:-0.280853485164;OCT4_SOX2{dimer}:-0.283843588233;HNF1A:-0.319568924381;POU2F1..3:-0.321080244586;HMGA1,2:-0.332705960824;HIC1:-0.332830352791;TFAP4:-0.335402864872;SNAI1..3:-0.344047825589;TBX4,5:-0.347174107675;NR3C1:-0.361157110523;UFEwm:-0.362175804931;BACH2:-0.367577995918;MYBL2:-0.379954751684;EN1,2:-0.386775255307;SPI1:-0.391485622171;ZIC1..3:-0.411975620089;IKZF2:-0.41242750308;ZEB1:-0.41794950545;NFKB1_REL_RELA:-0.42313671439;MYFfamily:-0.440523439592;EBF1:-0.441446164998;SPIB:-0.467493365544;FOSL2:-0.482257984582;RUNX1..3:-0.491487415626;PAX5:-0.493418545585;MTF1:-0.51090545315;ZNF238:-0.524316436292;HMX1:-0.526036740274;KLF4:-0.536529022619;PAX3,7:-0.541961058427;NFE2:-0.559127000691;PBX1:-0.563894452679;IRF7:-0.57943999923;FOXL1:-0.596159061321;SRF:-0.630247760635;FOX{I1,J2}:-0.63059139382;CDC5L:-0.638083918803;BPTF:-0.644448228045;NR1H4:-0.700581967357;NHLH1,2:-0.706164447884;STAT2,4,6:-0.724806261529;ESRRA:-0.743240657305;TLX1..3_NFIC{dimer}:-0.7687107389;XCPE1{core}:-0.785243233115;GCM1,2:-0.793010266623;NFIX:-0.811658466452;POU6F1:-0.820010613508;TFCP2:-0.866164492062;XBP1:-0.881806711284;HOX{A6,A7,B6,B7}:-0.928587394076;TFAP2{A,C}:-0.935469686738;POU3F1..4:-0.939153456374;RXR{A,B,G}:-0.957742216546;ETS1,2:-0.967835541381;IRF1,2:-0.973372226602;MTE{core}:-0.989499021612;NFE2L2:-1.02234299004;AR:-1.03555222806;POU5F1:-1.03594277858;PAX6:-1.09464294228;FOXO1,3,4:-1.11582401486;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.16537604193;NFE2L1:-1.17517212606;ALX4:-1.20011151886;SMAD1..7,9:-1.33191905354;GLI1..3:-1.36891965131;PDX1:-1.41622340109;HES1:-1.42546211973;MAFB:-1.58491836973;TBP:-1.70612212965;RXRA_VDR{dimer}:-1.87743329322 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10410-106B5;search_select_hide=table117:FF:10410-106B5 | |||
}} | }} | ||
Latest revision as of 13:59, 3 June 2020
| Name: | extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10728 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| HumanCAGEScan Download raw sequence, BAM & CTSS | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10728
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10728
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.623 |
| 10 | 10 | 0.296 |
| 100 | 100 | 0.92 |
| 101 | 101 | 0.593 |
| 102 | 102 | 0.722 |
| 103 | 103 | 0.0231 |
| 104 | 104 | 0.741 |
| 105 | 105 | 0.864 |
| 106 | 106 | 0.00123 |
| 107 | 107 | 0.00518 |
| 108 | 108 | 0.19 |
| 109 | 109 | 0.305 |
| 11 | 11 | 0.124 |
| 110 | 110 | 0.869 |
| 111 | 111 | 0.41 |
| 112 | 112 | 0.0583 |
| 113 | 113 | 0.263 |
| 114 | 114 | 0.339 |
| 115 | 115 | 0.522 |
| 116 | 116 | 0.667 |
| 117 | 117 | 0.708 |
| 118 | 118 | 0.348 |
| 119 | 119 | 0.341 |
| 12 | 12 | 0.323 |
| 120 | 120 | 0.907 |
| 121 | 121 | 0.181 |
| 122 | 122 | 0.222 |
| 123 | 123 | 0.104 |
| 124 | 124 | 0.917 |
| 125 | 125 | 0.341 |
| 126 | 126 | 0.322 |
| 127 | 127 | 0.0655 |
| 128 | 128 | 0.056 |
| 129 | 129 | 0.828 |
| 13 | 13 | 0.542 |
| 130 | 130 | 0.373 |
| 131 | 131 | 0.99 |
| 132 | 132 | 0.851 |
| 133 | 133 | 0.961 |
| 134 | 134 | 0.871 |
| 135 | 135 | 0.176 |
| 136 | 136 | 0.785 |
| 137 | 137 | 0.27 |
| 138 | 138 | 0.909 |
| 139 | 139 | 0.997 |
| 14 | 14 | 0.451 |
| 140 | 140 | 2.76837e-6 |
| 141 | 141 | 0.968 |
| 142 | 142 | 0.897 |
| 143 | 143 | 0.00623 |
| 144 | 144 | 0.887 |
| 145 | 145 | 0.196 |
| 146 | 146 | 0.501 |
| 147 | 147 | 0.802 |
| 148 | 148 | 0.00224 |
| 149 | 149 | 0.265 |
| 15 | 15 | 0.511 |
| 150 | 150 | 0.354 |
| 151 | 151 | 0.803 |
| 152 | 152 | 0.14 |
| 153 | 153 | 0.648 |
| 154 | 154 | 0.693 |
| 155 | 155 | 0.43 |
| 156 | 156 | 0.534 |
| 157 | 157 | 0.0555 |
| 158 | 158 | 0.754 |
| 159 | 159 | 0.878 |
| 16 | 16 | 0.3 |
| 160 | 160 | 0.0415 |
| 161 | 161 | 0.439 |
| 162 | 162 | 0.484 |
| 163 | 163 | 0.214 |
| 164 | 164 | 0.94 |
| 165 | 165 | 0.246 |
| 166 | 166 | 0.373 |
| 167 | 167 | 0.438 |
| 168 | 168 | 0.0959 |
| 169 | 169 | 0.0773 |
| 17 | 17 | 0.131 |
| 18 | 18 | 0.212 |
| 19 | 19 | 0.143 |
| 2 | 2 | 0.226 |
| 20 | 20 | 0.491 |
| 21 | 21 | 0.394 |
| 22 | 22 | 0.32 |
| 23 | 23 | 0.00861 |
| 24 | 24 | 0.912 |
| 25 | 25 | 0.331 |
| 26 | 26 | 0.793 |
| 27 | 27 | 0.13 |
| 28 | 28 | 0.796 |
| 29 | 29 | 0.396 |
| 3 | 3 | 0.44 |
| 30 | 30 | 0.414 |
| 31 | 31 | 0.989 |
| 32 | 32 | 0.00411 |
| 33 | 33 | 0.542 |
| 34 | 34 | 0.421 |
| 35 | 35 | 0.644 |
| 36 | 36 | 0.116 |
| 37 | 37 | 0.381 |
| 38 | 38 | 0.378 |
| 39 | 39 | 0.117 |
| 4 | 4 | 0.771 |
| 40 | 40 | 0.0364 |
| 41 | 41 | 0.0174 |
| 42 | 42 | 0.719 |
| 43 | 43 | 0.149 |
| 44 | 44 | 0.02 |
| 45 | 45 | 0.33 |
| 46 | 46 | 0.273 |
| 47 | 47 | 0.698 |
| 48 | 48 | 0.404 |
| 49 | 49 | 0.433 |
| 5 | 5 | 0.538 |
| 50 | 50 | 0.82 |
| 51 | 51 | 0.488 |
| 52 | 52 | 0.17 |
| 53 | 53 | 0.908 |
| 54 | 54 | 0.648 |
| 55 | 55 | 0.689 |
| 56 | 56 | 0.828 |
| 57 | 57 | 0.809 |
| 58 | 58 | 0.0792 |
| 59 | 59 | 0.0168 |
| 6 | 6 | 0.256 |
| 60 | 60 | 0.0333 |
| 61 | 61 | 0.95 |
| 62 | 62 | 0.0388 |
| 63 | 63 | 0.149 |
| 64 | 64 | 0.446 |
| 65 | 65 | 0.107 |
| 66 | 66 | 0.781 |
| 67 | 67 | 0.707 |
| 68 | 68 | 0.428 |
| 69 | 69 | 0.594 |
| 7 | 7 | 0.368 |
| 70 | 70 | 0.369 |
| 71 | 71 | 0.175 |
| 72 | 72 | 0.347 |
| 73 | 73 | 0.0912 |
| 74 | 74 | 0.466 |
| 75 | 75 | 0.822 |
| 76 | 76 | 0.483 |
| 77 | 77 | 0.0893 |
| 78 | 78 | 0.319 |
| 79 | 79 | 0.0173 |
| 8 | 8 | 0.319 |
| 80 | 80 | 0.967 |
| 81 | 81 | 0.309 |
| 82 | 82 | 0.0501 |
| 83 | 83 | 0.105 |
| 84 | 84 | 0.847 |
| 85 | 85 | 0.19 |
| 86 | 86 | 0.886 |
| 87 | 87 | 0.56 |
| 88 | 88 | 0.416 |
| 89 | 89 | 0.186 |
| 9 | 9 | 0.0398 |
| 90 | 90 | 0.938 |
| 91 | 91 | 0.0141 |
| 92 | 92 | 0.375 |
| 93 | 93 | 0.0806 |
| 94 | 94 | 0.301 |
| 95 | 95 | 0.367 |
| 96 | 96 | 0.259 |
| 97 | 97 | 0.981 |
| 98 | 98 | 0.612 |
| 99 | 99 | 0.584 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10728
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:6496 extraskeletal myxoid chondrosarcoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0101574 chondrosarcoma cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000153 (GAG secreting cell)
0000667 (collagen secreting cell)
0000327 (extracellular matrix secreting cell)
0000447 (carbohydrate secreting cell)
0000255 (eukaryotic cell)
0000138 (chondrocyte)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
201 (connective tissue cancer)
0060100 (musculoskeletal system cancer)
1115 (sarcoma)
3371 (chondrosarcoma)
4549 (extraosseous chondrosarcoma)
5861 (myxoid chondrosarcoma)
6496 (extraskeletal myxoid chondrosarcoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001474 (bone element)
0002384 (connective tissue)
0002418 (cartilage tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0004755 (skeletal tissue)
0002204 (musculoskeletal system)
0001434 (skeletal system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100385 (bone cancer cell line sample)
0101574 (chondrosarcoma cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
