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{{f5samples
{{f5samples
|id=FF:10470-106I2
|DRA_sample_Accession=CAGE@SAMD00005108
|name=gall bladder carcinoma cell line:TGBC14TKB
|accession_numbers=CAGE;DRX007888;DRR008760;DRZ000185;DRZ001570;DRZ011535;DRZ012920
|sample_id=10470
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002110,UBERON:0002100,UBERON:0001007,UBERON:0004119,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0005177,UBERON:0005172,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0002294,UBERON:0001173,UBERON:0000916,UBERON:0002423
|rna_tube_id=106I2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:1000415
|rna_box=106
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305
|rna_position=I2
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120
|sample_cell_lot=
|comment=
|sample_cell_catalog=RCB1186
|created_by=
|sample_company=RIKEN Bioresource centre
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.10!123.98!EHF;;chr1:201979743..201979762,+!p1@ELF3!2.02!103.25!ELF3;;chr1:201979703..201979721,+!p2@ELF3!1.95!87.80!ELF3;;chr17:7493405..7493419,-!p1@SOX15!1.95!87.22!SOX15;;chr20:55204351..55204377,+!p1@TFAP2C!1.91!100.51!TFAP2C;;chr17:46682321..46682362,-!p1@HOXB6!1.91!80.76!HOXB6;;chr6:10415484..10415508,-!p3@TFAP2A!1.74!54.56!TFAP2A;;chr17:74137321..74137337,-!p1@FOXJ1!1.68!46.54!FOXJ1;;chr6:126240442..126240459,+!p4@NCOA7!1.64!53.97!NCOA7;;chr2:16080659..16080685,+!p1@MYCN!1.64!43.02!MYCN;;chr3:12330560..12330579,+!p1@PPARG!1.58!42.24!PPARG;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.53!33.24!ZBED1;;chr14:38064429..38064486,-!p1@FOXA1!1.51!31.09!FOXA1;;chr8:102504651..102504683,+!p1@GRHL2!1.45!27.38!GRHL2;;chr19:22193731..22193751,-!p1@ZNF208!1.42!25.23!ZNF208;;chr6:126240380..126240430,+!p2@NCOA7!1.40!61.79!NCOA7;;chr11:34642656..34642667,+!p2@EHF!1.40!24.05!EHF;;chr13:73633131..73633149,+!p1@KLF5!1.39!240.72!KLF5;;chr1:209979467..209979494,-!p1@IRF6!1.38!25.62!IRF6;;chr6:10412600..10412637,-!p1@TFAP2A!1.37!36.57!TFAP2A;;chr6:126240463..126240489,+!p6@NCOA7!1.37!25.03!NCOA7;;chr5:149546334..149546364,+!p1@CDX1!1.32!19.75!CDX1;;chr19:45971246..45971265,+!p1@FOSB!1.30!345.73!FOSB;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.29!18.58!HOXC5;;chr17:48072574..48072597,-!p1@DLX3!1.28!18.19!DLX3;;chr2:176969228..176969260,+!p1@HOXD11!1.26!17.01!HOXD11;;chr2:231084639..231084654,-!p2@SP110!1.25!27.96!SP110;;chr11:34645791..34645836,+!p3@EHF!1.25!16.82!EHF;;chr6:28321909..28321965,-!p3@ZNF323!1.25!16.82!ZNF323;;chr6:10419768..10419819,-!p6@TFAP2A!1.25!16.62!TFAP2A;;chr2:176969179..176969226,+!p2@HOXD11!1.24!16.43!HOXD11;;chr6:1312325..1312340,+!p1@FOXQ1!1.21!24.84!FOXQ1;;chr9:96717629..96717644,-!p1@BARX1!1.20!14.86!BARX1;;chr12:52445218..52445237,+!p1@NR4A1!1.18!176.78!NR4A1;;chr15:96869511..96869525,+!p16@NR2F2!1.18!15.64!NR2F2;;chr19:20278043..20278054,+!p2@ZNF486!1.15!13.10!ZNF486;;chr14:75988771..75988826,+!p1@BATF!1.12!16.43!BATF;;chr6:10415276..10415341,-!p2@TFAP2A!1.12!15.06!TFAP2A;;chr11:129245526..129245553,+!p1@BARX2!1.12!12.32!BARX2;;chr20:45087928..45087965,-!p1@ENST00000400371,p1@uc002xry.2!1.12!12.12!ZNF663;;chr5:134369905..134369972,-!p1@PITX1!1.10!17.99!PITX1;;chr6:28321971..28321995,-!p1@ZNF323!1.10!11.73!ZNF323;;chr12:54378923..54378966,+!p1@HOXC10!1.08!11.15!HOXC10;;chr1:164528410..164528428,+!p1@PBX1!1.07!82.13!PBX1;;chr9:100615499..100615519,+!p1@FOXE1!1.07!10.76!FOXE1;;chrX:129244655..129244697,-!p4@ELF4!1.06!18.77!ELF4;;chr12:54785074..54785122,-!p2@ZNF385A!1.06!16.04!ZNF385A;;chr5:134369879..134369898,-!p2@PITX1!1.06!10.56!PITX1;;chr3:128206762..128206781,-!p2@GATA2!1.04!62.58!GATA2;;chr16:54320675..54320715,-!p1@IRX3!1.04!21.71!IRX3;;chr11:615570..615721,-!p2@IRF7!1.04!19.95!IRF7;;chr8:102504690..102504704,+!p3@GRHL2!1.04!9.97!GRHL2;;chr11:615942..615957,-!p1@IRF7!1.03!94.26!IRF7;;chr17:7492684..7492778,-!p2@SOX15!1.03!20.92!SOX15;;chr2:10091815..10091864,+!p1@GRHL1!1.03!13.10!GRHL1;;chr19:20278012..20278034,+!p1@ZNF486!1.02!81.35!ZNF486;;chr3:32023232..32023273,+!p1@ZNF860!1.02!13.49!ZNF860;;chrX:24169518..24169522,+!p8@ZFX!1.02!9.58!ZFX;;chr12:54348655..54348693,+!p1@HOXC12!1.02!9.39!HOXC12;;chr1:24645921..24645973,+!p2@GRHL3!1.02!9.39!GRHL3;;chr16:54320646..54320672,-!p2@IRX3!1.01!14.28!IRX3;;chr16:54320617..54320643,-!p3@IRX3!1.01!11.93!IRX3;;chr19:52956798..52956843,+!p1@ZNF578!1.00!18.19!ZNF578;;chr1:164528445..164528459,+!p2@PBX1!0.99!28.16!PBX1;;chr6:126240356..126240379,+!p7@NCOA7!0.99!10.95!NCOA7;;chr7:73038839..73038862,-!p1@MLXIPL!0.99!8.80!MLXIPL;;chr1:935398..935465,-!p2@HES4!0.98!18.19!HES4;;chr2:25475120..25475176,-!p2@DNMT3A!0.98!11.73!DNMT3A;;chr12:54785054..54785072,-!p4@ZNF385A!0.98!9.78!ZNF385A;;chr17:45928521..45928539,-!p1@SP6!0.98!8.60!SP6;;chr17:41739283..41739297,-!p1@MEOX1!0.97!8.41!MEOX1;;chr17:46688334..46688385,-!p1@HOXB7!0.96!11.93!HOXB7;;chr6:28048343..28048354,+!p1@ZNF165!0.96!8.21!ZNF165;;chr10:97889464..97889494,+!p3@ZNF518A!0.95!15.25!ZNF518A;;chr13:73636252..73636307,+!p2@KLF5!0.95!9.39!KLF5;;chr1:6479968..6479986,-!p1@HES2!0.95!7.82!HES2;;chr14:75745523..75745537,+!p1@FOS!0.94!955.66!FOS;;chr17:4981745..4981810,+!p1@ZFP3!0.94!39.50!ZFP3;;chr19:20188776..20188826,+!p1@ZNF90!0.92!20.34!ZNF90;;chr2:231084820..231084836,-!p5@SP110!0.92!8.41!SP110;;chr9:126774018..126774055,+!p1@LHX2!0.92!7.24!LHX2;;chr1:164528384..164528409,+!p3@PBX1!0.91!23.27!PBX1;;chr1:41827095..41827155,+!p1@FOXO6!0.91!9.78!FOXO6;;chr6:85473156..85473210,-!p2@TBX18!0.91!8.80!TBX18;;chr5:142780189..142780223,-!p6@NR3C1!0.91!7.04!NR3C1;;chr2:214015343..214015366,-!p3@IKZF2!0.91!7.04!IKZF2;;chr14:37131058..37131139,+!p1@PAX9!0.91!7.04!PAX9;;chr20:50159198..50159299,-!p1@NFATC2!0.89!9.97!NFATC2;;chr19:24097706..24097731,+!p2@ZNF726!0.88!12.91!ZNF726;;chr20:18038521..18038571,-!p1@OVOL2!0.88!6.65!OVOL2;;chr5:142780237..142780261,-!p7@NR3C1!0.88!6.65!NR3C1;;chr3:101575889..101575903,+!p3@NFKBIZ!0.88!6.65!NFKBIZ;;chr3:181429704..181429722,+!p1@SOX2!0.88!6.65!SOX2;;chr19:57183114..57183145,-!p1@ZNF835!0.87!7.24!ZNF835;;chr20:50418128..50418147,-!p2@SALL4!0.87!6.45!SALL4;;chr3:147111198..147111225,+!p4@ZIC1!0.87!6.45!ZIC1;;chrX:131623044..131623089,-!p1@MBNL3!0.86!27.38!MBNL3;;chr19:52839515..52839572,+!p1@ZNF610!0.86!14.08!ZNF610;;chr2:121493492..121493537,+!p2@GLI2!0.86!10.56!GLI2;;chr17:46667594..46667619,-!p1@HOXB3!0.86!6.26!HOXB3;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.86!6.26!ZNF676;;chr11:65554528..65554546,+!p1@OVOL1!0.86!6.26!OVOL1;;chr14:24630902..24630948,+!p2@IRF9!0.85!7.43!IRF9;;chr14:38064590..38064606,-!p2@FOXA1!0.85!6.06!FOXA1;;chr3:101575172..101575195,+!p5@NFKBIZ!0.85!6.06!NFKBIZ;;chr12:53625966..53626012,-!p2@RARG!0.84!16.43!RARG;;chr1:164528687..164528711,+!p6@PBX1!0.84!7.04!PBX1;;chr1:24646002..24646013,+!p3@GRHL3!0.84!5.87!GRHL3;;chr20:42295745..42295765,+!p1@MYBL2!0.83!100.90!MYBL2;;chr2:71127699..71127744,+!p1@VAX2!0.83!12.32!VAX2;;chr10:8096631..8096660,+!p1@GATA3!0.83!7.04!GATA3;;chr3:169381420..169381535,-!p1@MECOM!0.83!6.84!MECOM;;chr19:53758058..53758088,-!p2@ZNF677!0.82!19.56!ZNF677;;chr13:73636516..73636532,+!p3@KLF5!0.82!6.45!KLF5;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.82!5.67!HOXC5;;chr2:16080635..16080650,+!p4@MYCN!0.82!5.67!MYCN;;chr17:46687959..46688007,-!p2@HOXB7!0.81!7.82!HOXB7;;chr6:36355513..36355578,-!p2@ETV7!0.81!7.04!ETV7;;chr7:27192185..27192209,-!p1@HOXA3!0.81!5.48!HOXA3;;chr14:37051798..37051831,-!p1@NKX2-8!0.81!5.48!NKX2-8;;chr3:128207349..128207386,-!p3@GATA2!0.81!5.48!GATA2;;chr12:80084737..80084763,-!p3@PAWR!0.80!21.12!PAWR;;chr19:48774586..48774670,+!p1@ZNF114!0.80!6.84!ZNF114;;chr1:42801540..42801562,-!p4@FOXJ3!0.80!5.28!FOXJ3;;chr20:55205825..55205847,+!p2@TFAP2C!0.80!5.28!TFAP2C;;chr6:126240490..126240501,+!p11@NCOA7!0.80!5.28!NCOA7;;chr3:181429741..181429767,+!p2@SOX2!0.80!5.28!SOX2;;chr19:24097675..24097699,+!p1@ZNF726!0.79!18.38!ZNF726;;chr15:41913690..41913753,+!p2@MGA!0.79!13.30!MGA;;chr3:170076314..170076334,+!p2@SKIL!0.79!6.84!SKIL;;chr19:58326246..58326262,-!p2@ZNF552!0.78!12.71!ZNF552;;chr2:121493425..121493474,+!p1@GLI2!0.78!11.73!GLI2;;chr1:164528588..164528610,+!p8@PBX1!0.78!8.02!PBX1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.77!281.40!NFKBIZ;;chr9:99180617..99180658,-!p1@ZNF367!0.77!11.34!ZNF367;;chrX:107018969..107019024,-!p6@TSC22D3!0.77!7.04!TSC22D3;;chr21:38071430..38071456,+!p1@SIM2!0.77!4.89!SIM2;;chr8:11561684..11561751,+!p1@GATA4!0.77!4.89!GATA4;;chr1:153939955..153940009,+!p2@CREB3L4!0.76!11.73!CREB3L4;;chr3:24536253..24536328,-!p1@THRB!0.76!9.39!THRB;;chr2:122042770..122042785,-!p1@TFCP2L1!0.76!4.69!TFCP2L1;;chr2:238592039..238592054,+!p4@LRRFIP1!0.76!4.69!LRRFIP1;;chr3:147111231..147111281,+!p3@ZIC1!0.76!4.69!ZIC1;;chr1:50889103..50889145,-!p1@DMRTA2!0.76!4.69!DMRTA2;;chr11:31832658..31832681,-!p1@PAX6!0.76!4.69!PAX6;;chr12:54332652..54332671,+!p2@HOXC13!0.76!4.69!HOXC13;;chr6:126240542..126240553,+!p14@NCOA7!0.76!4.69!NCOA7;;chr1:164528340..164528379,+!p4@PBX1!0.75!12.32!PBX1;;chr20:45142154..45142227,-!p1@ZNF334!0.75!9.78!ZNF334;;chr19:22235279..22235301,+!p1@ZNF257!0.75!9.19!ZNF257;;chr19:38042240..38042309,+!p2@ZNF540!0.75!7.43!ZNF540;;chr20:42295713..42295738,+!p2@MYBL2!0.74!29.72!MYBL2;;chr1:247171316..247171336,-!p3@ZNF695!0.74!7.04!ZNF695;;chr1:151804244..151804310,-!p1@RORC!0.74!4.50!RORC;;chr16:85932760..85932775,+!p1@IRF8!0.74!4.50!IRF8;;chr19:44952635..44952668,-!p1@ZNF229!0.72!23.47!ZNF229;;chr19:53360870..53360873,-!p1@ZNF468!0.72!17.40!ZNF468;;chr20:50721803..50721857,-!p2@ZFP64!0.72!7.04!ZFP64;;chr1:2461692..2461710,-!p1@HES5!0.72!4.30!HES5;;chr1:24645832..24645853,+!p1@GRHL3!0.72!4.30!GRHL3;;chr1:3569072..3569093,+!p1@TP73!0.72!4.30!TP73;;chr5:172662197..172662216,-!p1@NKX2-5!0.72!4.30!NKX2-5;;chr6:10419824..10419840,-!p9@TFAP2A!0.72!4.30!TFAP2A;;chr3:40547564..40547616,+!p1@ZNF620!0.71!6.06!ZNF620;;chr11:62369806..62369837,-!p8@MTA2!0.71!5.48!MTA2;;chr10:23481233..23481249,+!p1@PTF1A!0.71!4.11!PTF1A;;chr11:65554563..65554576,+!p2@OVOL1!0.71!4.11!OVOL1;;chr12:54348702..54348715,+!p2@HOXC12!0.71!4.11!HOXC12;;chr14:36989940..36989957,-!p2@NKX2-1!0.71!4.11!NKX2-1;;chr4:8873545..8873583,-!p1@HMX1!0.71!4.11!HMX1;;chr8:102504979..102505010,+!p2@GRHL2!0.71!4.11!GRHL2;;chr2:45236540..45236577,-!p1@SIX2!0.71!4.11!SIX2;;chr6:31126291..31126399,+!p1@TCF19!0.70!43.41!TCF19;;chr6:21597514..21597578,+!p4@SOX4!0.70!7.24!SOX4;;chrX:129244840..129244881,-!p2@ELF4!0.69!16.82!ELF4;;chr19:53636125..53636178,-!p1@ZNF415!0.69!12.12!ZNF415;;chr19:20150268..20150298,-!p2@ZNF682!0.69!8.02!ZNF682;;chr19:37997812..37997866,+!p1@ZNF793!0.69!7.04!ZNF793;;chr16:54320158..54320200,-!p5@IRX3!0.69!5.87!IRX3;;chr2:191878812..191878823,-!p2@STAT1!0.69!5.08!STAT1;;chr22:24093154..24093183,-!p2@ZNF70!0.69!3.91!ZNF70;;chr2:63277948..63277974,+!p1@OTX1!0.69!3.91!OTX1;;chr9:100616439..100616476,+!p3@FOXE1!0.69!3.91!FOXE1;;chr12:54332608..54332636,+!p1@HOXC13!0.69!3.91!HOXC13;;chr13:73636310..73636330,+!p5@KLF5!0.69!3.91!KLF5;;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|sample_dev_stage=
|sample_tissue=gall bladder
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=unknown
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=1.54
|rna_od260/280=2.06
|sample_cell_type=unclassifiable
|sample_cell_line=TGBC14TKB
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=gall bladder carcinoma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=59.78775
|rna_concentration=2.39151
|sample_note=
|profile_hcage=CNhs11256,LSID757,release008,COMPLETED
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|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0001007,UBERON:0001041,UBERON:0001062,UBERON:0001173,UBERON:0001555,UBERON:0002050,UBERON:0002075,UBERON:0002100,UBERON:0002110,UBERON:0002294,UBERON:0002323,UBERON:0002417,UBERON:0002423,UBERON:0002532,UBERON:0002553,UBERON:0003104,UBERON:0003914,UBERON:0004119,UBERON:0004120,UBERON:0004161,UBERON:0004185,UBERON:0004458,UBERON:0004912,UBERON:0004921,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005423,UBERON:0005911,UBERON:0007026,UBERON:0009142
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:305,DOID:4
|sample_description=
|fonse_cell_line=FF:0101120
|fonse_cell_line=FF:0101120
|fonse_cell_line_closure=FF:0101120
|fonse_cell_line_closure=FF:0101120
Line 66: Line 39:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
|created_by=
|creation_date=
|def=
|has_quality=
|has_quality=
|is_a=CL:1000415;;EFO:0002091;;FF:0000003;;FF:0000210;;FF:0100297
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/gall%2520bladder%2520carcinoma%2520cell%2520line%253aTGBC14TKB.CNhs11256.10470-106I2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/gall%2520bladder%2520carcinoma%2520cell%2520line%253aTGBC14TKB.CNhs11256.10470-106I2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/gall%2520bladder%2520carcinoma%2520cell%2520line%253aTGBC14TKB.CNhs11256.10470-106I2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/gall%2520bladder%2520carcinoma%2520cell%2520line%253aTGBC14TKB.CNhs11256.10470-106I2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/gall%2520bladder%2520carcinoma%2520cell%2520line%253aTGBC14TKB.CNhs11256.10470-106I2.hg38.nobarcode.ctss.bed.gz
|id=FF:10470-106I2
|is_a=CL:1000415;;EFO:0002091;;FF:0000210;;FF:0100297
|is_obsolete=
|library_id=CNhs11256
|library_id_phase_based=2:CNhs11256
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10470
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10470
|name=gall bladder carcinoma cell line:TGBC14TKB
|namespace=FANTOM5
|namespace=FANTOM5
|part_of=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=106
|rna_catalog_number=
|rna_concentration=2.39151
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.54
|rna_od260/280=2.06
|rna_position=I2
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=106I2
|rna_weight_ug=59.78775
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=RCB1186
|sample_cell_line=TGBC14TKB
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=gall bladder carcinoma
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.77784268578694e-296!GO:0043226;organelle;2.90680798291055e-244!GO:0043229;intracellular organelle;9.15753002137992e-244!GO:0043231;intracellular membrane-bound organelle;1.96706401814195e-240!GO:0043227;membrane-bound organelle;3.53128752327524e-240!GO:0005737;cytoplasm;1.92982715191735e-177!GO:0044422;organelle part;1.19064657067328e-152!GO:0044446;intracellular organelle part;2.67687043085119e-151!GO:0005634;nucleus;1.7102688278382e-127!GO:0044444;cytoplasmic part;3.97588616781966e-111!GO:0044237;cellular metabolic process;3.52841268399434e-102!GO:0044238;primary metabolic process;1.21581014575475e-101!GO:0043170;macromolecule metabolic process;3.57129662755738e-95!GO:0032991;macromolecular complex;5.18112940744522e-95!GO:0044428;nuclear part;2.79371457440122e-85!GO:0030529;ribonucleoprotein complex;2.30491443858557e-81!GO:0003723;RNA binding;2.30491443858557e-81!GO:0043233;organelle lumen;7.75771853860387e-77!GO:0031974;membrane-enclosed lumen;7.75771853860387e-77!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.38706198494844e-68!GO:0043283;biopolymer metabolic process;4.09429974495012e-68!GO:0010467;gene expression;6.30336858521551e-65!GO:0005515;protein binding;4.80950725143366e-63!GO:0005739;mitochondrion;8.68282543466832e-60!GO:0006396;RNA processing;9.66234789834431e-54!GO:0031981;nuclear lumen;1.29582891035975e-49!GO:0003676;nucleic acid binding;4.93115354030807e-49!GO:0043234;protein complex;2.8982564101861e-47!GO:0006412;translation;1.48731224286558e-46!GO:0016043;cellular component organization and biogenesis;3.83761817084703e-46!GO:0033036;macromolecule localization;2.78257902797611e-45!GO:0043228;non-membrane-bound organelle;2.78257902797611e-45!GO:0043232;intracellular non-membrane-bound organelle;2.78257902797611e-45!GO:0005840;ribosome;2.12364267738195e-44!GO:0016071;mRNA metabolic process;2.31322988037454e-44!GO:0015031;protein transport;8.70961558415759e-44!GO:0031090;organelle membrane;8.50841698352043e-43!GO:0008380;RNA splicing;4.63323102875303e-41!GO:0008104;protein localization;2.41525091228921e-40!GO:0006259;DNA metabolic process;2.92964841354771e-39!GO:0045184;establishment of protein localization;4.88629284539231e-39!GO:0044429;mitochondrial part;1.92623660804753e-38!GO:0006397;mRNA processing;3.16908720184401e-38!GO:0016070;RNA metabolic process;1.29538186531986e-37!GO:0003735;structural constituent of ribosome;2.05798849301733e-37!GO:0031967;organelle envelope;3.33937132835345e-37!GO:0031975;envelope;5.52654162694778e-37!GO:0019538;protein metabolic process;4.34961180312651e-36!GO:0006996;organelle organization and biogenesis;2.72393748172933e-35!GO:0046907;intracellular transport;1.01224275007342e-34!GO:0009058;biosynthetic process;4.11695511857995e-34!GO:0044249;cellular biosynthetic process;5.45084359086477e-34!GO:0065003;macromolecular complex assembly;9.30473520924434e-34!GO:0044267;cellular protein metabolic process;9.70313978682871e-33!GO:0009059;macromolecule biosynthetic process;1.42575532396935e-32!GO:0044260;cellular macromolecule metabolic process;5.91903359740574e-32!GO:0033279;ribosomal subunit;6.337705334983e-32!GO:0005654;nucleoplasm;5.85866083070593e-31!GO:0007049;cell cycle;1.17767006202481e-30!GO:0005829;cytosol;2.08574030557142e-30!GO:0022607;cellular component assembly;1.16524843999045e-29!GO:0006886;intracellular protein transport;2.17746339200596e-29!GO:0005681;spliceosome;6.68954217916956e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.8539991548976e-28!GO:0005694;chromosome;9.07482625822759e-27!GO:0000166;nucleotide binding;1.01271989103036e-26!GO:0006974;response to DNA damage stimulus;3.70957487551649e-25!GO:0044451;nucleoplasm part;1.10156276954977e-24!GO:0019866;organelle inner membrane;2.63268168062236e-23!GO:0044427;chromosomal part;3.93377594130757e-23!GO:0051649;establishment of cellular localization;4.44079998206492e-23!GO:0051641;cellular localization;9.64671013293871e-23!GO:0005740;mitochondrial envelope;5.79436934331239e-22!GO:0022402;cell cycle process;6.74089578631114e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.18452022956677e-21!GO:0005743;mitochondrial inner membrane;4.01079462030478e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.62967477784285e-21!GO:0016462;pyrophosphatase activity;5.17489795822048e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;5.48448937847371e-21!GO:0031966;mitochondrial membrane;1.02368741445481e-20!GO:0017111;nucleoside-triphosphatase activity;1.78935953793113e-20!GO:0005730;nucleolus;2.03230250699062e-20!GO:0016874;ligase activity;3.37593105289947e-20!GO:0006119;oxidative phosphorylation;6.07945244186085e-20!GO:0006281;DNA repair;6.81244234681992e-20!GO:0031980;mitochondrial lumen;9.91807716495071e-20!GO:0005759;mitochondrial matrix;9.91807716495071e-20!GO:0000278;mitotic cell cycle;3.54717653879626e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;5.20440739187527e-19!GO:0019941;modification-dependent protein catabolic process;9.86081000734527e-19!GO:0043632;modification-dependent macromolecule catabolic process;9.86081000734527e-19!GO:0051276;chromosome organization and biogenesis;1.48042371111514e-18!GO:0032553;ribonucleotide binding;1.8780672276119e-18!GO:0032555;purine ribonucleotide binding;1.8780672276119e-18!GO:0044257;cellular protein catabolic process;2.5042805092326e-18!GO:0006511;ubiquitin-dependent protein catabolic process;2.64566533380269e-18!GO:0044445;cytosolic part;3.37487327047568e-18!GO:0012505;endomembrane system;5.71953514568263e-18!GO:0006512;ubiquitin cycle;7.99876522533928e-18!GO:0022618;protein-RNA complex assembly;8.60538342033324e-18!GO:0044265;cellular macromolecule catabolic process;9.17546945212661e-18!GO:0017076;purine nucleotide binding;1.13318974791809e-17!GO:0050794;regulation of cellular process;2.5519165066877e-17!GO:0008134;transcription factor binding;3.81021298098725e-17!GO:0000502;proteasome complex (sensu Eukaryota);8.86909457751445e-17!GO:0043285;biopolymer catabolic process;1.0226368916513e-16!GO:0006260;DNA replication;1.45661572610279e-16!GO:0015935;small ribosomal subunit;1.76813666141195e-16!GO:0015934;large ribosomal subunit;2.0912037754222e-16!GO:0044455;mitochondrial membrane part;2.12464538244601e-16!GO:0048770;pigment granule;2.26220833448047e-16!GO:0042470;melanosome;2.26220833448047e-16!GO:0022403;cell cycle phase;3.37511085317988e-16!GO:0009719;response to endogenous stimulus;3.46727947561307e-16!GO:0051301;cell division;4.22315404779356e-16!GO:0031965;nuclear membrane;6.93650196346387e-16!GO:0005635;nuclear envelope;8.68704886806893e-16!GO:0000087;M phase of mitotic cell cycle;9.28761981665213e-16!GO:0007067;mitosis;1.30051689974514e-15!GO:0005524;ATP binding;2.21431597356977e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;4.01742106671957e-15!GO:0030163;protein catabolic process;4.72221805424745e-15!GO:0006457;protein folding;6.02625731683568e-15!GO:0032559;adenyl ribonucleotide binding;6.11580970488176e-15!GO:0008135;translation factor activity, nucleic acid binding;9.24998990053561e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;9.72180820951693e-15!GO:0000375;RNA splicing, via transesterification reactions;9.72180820951693e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.72180820951693e-15!GO:0019222;regulation of metabolic process;9.90463279026573e-15!GO:0000785;chromatin;1.19633367889802e-14!GO:0009057;macromolecule catabolic process;1.59320322043285e-14!GO:0044453;nuclear membrane part;2.01826346829375e-14!GO:0006323;DNA packaging;2.22301149328195e-14!GO:0006605;protein targeting;3.66964702701174e-14!GO:0005761;mitochondrial ribosome;4.05075675206901e-14!GO:0000313;organellar ribosome;4.05075675206901e-14!GO:0030554;adenyl nucleotide binding;4.83752143745559e-14!GO:0004386;helicase activity;5.47621173454983e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.51824349143109e-14!GO:0005746;mitochondrial respiratory chain;7.66809713746402e-14!GO:0000279;M phase;7.84319514061155e-14!GO:0042623;ATPase activity, coupled;1.30678036693976e-13!GO:0005783;endoplasmic reticulum;1.32755740621263e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.33868927863231e-13!GO:0003954;NADH dehydrogenase activity;1.33868927863231e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.33868927863231e-13!GO:0016887;ATPase activity;1.43546183918505e-13!GO:0016604;nuclear body;1.62365572599338e-13!GO:0006403;RNA localization;2.26127392379101e-13!GO:0006366;transcription from RNA polymerase II promoter;2.53646993741097e-13!GO:0050657;nucleic acid transport;2.64226587691525e-13!GO:0051236;establishment of RNA localization;2.64226587691525e-13!GO:0050658;RNA transport;2.64226587691525e-13!GO:0005643;nuclear pore;5.77048137388952e-13!GO:0048193;Golgi vesicle transport;7.3964813491891e-13!GO:0006333;chromatin assembly or disassembly;1.00642083984625e-12!GO:0005794;Golgi apparatus;1.11934336898872e-12!GO:0051082;unfolded protein binding;1.44671326667075e-12!GO:0065004;protein-DNA complex assembly;2.13042265164204e-12!GO:0044432;endoplasmic reticulum part;2.24709139038008e-12!GO:0031323;regulation of cellular metabolic process;3.39085995482231e-12!GO:0044248;cellular catabolic process;7.7206970333912e-12!GO:0006913;nucleocytoplasmic transport;9.97599959580419e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.01875941234177e-11!GO:0051186;cofactor metabolic process;1.26980106217021e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.60931035319732e-11!GO:0045271;respiratory chain complex I;1.60931035319732e-11!GO:0005747;mitochondrial respiratory chain complex I;1.60931035319732e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.04015044258381e-11!GO:0042773;ATP synthesis coupled electron transport;2.04015044258381e-11!GO:0043412;biopolymer modification;2.08872650195343e-11!GO:0050789;regulation of biological process;2.2876015517557e-11!GO:0051169;nuclear transport;2.2876015517557e-11!GO:0051726;regulation of cell cycle;2.31949042246023e-11!GO:0000074;regulation of progression through cell cycle;2.41977938926175e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.61439691054534e-11!GO:0051028;mRNA transport;2.88134937690079e-11!GO:0006446;regulation of translational initiation;3.71290848177661e-11!GO:0065002;intracellular protein transport across a membrane;3.99043752198584e-11!GO:0042254;ribosome biogenesis and assembly;4.2855769567684e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.40824066494699e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.77244586446854e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.29986330422421e-11!GO:0008026;ATP-dependent helicase activity;5.40917286366191e-11!GO:0006350;transcription;6.69361733758536e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;7.05071968781826e-11!GO:0008639;small protein conjugating enzyme activity;7.52930823749065e-11!GO:0010468;regulation of gene expression;1.20003763941738e-10!GO:0006413;translational initiation;1.25452734092089e-10!GO:0016607;nuclear speck;1.4111341600302e-10!GO:0004842;ubiquitin-protein ligase activity;1.98627119050306e-10!GO:0016192;vesicle-mediated transport;2.04168830904972e-10!GO:0015630;microtubule cytoskeleton;2.2606433135696e-10!GO:0008565;protein transporter activity;2.48375993165381e-10!GO:0019787;small conjugating protein ligase activity;2.51378146169454e-10!GO:0003743;translation initiation factor activity;2.62218239439055e-10!GO:0003712;transcription cofactor activity;4.54729565328082e-10!GO:0046930;pore complex;5.60789022240324e-10!GO:0006732;coenzyme metabolic process;6.00458603804964e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.1590828028825e-10!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.1074860747585e-10!GO:0006399;tRNA metabolic process;7.4198719185641e-10!GO:0012501;programmed cell death;7.62786940626169e-10!GO:0006334;nucleosome assembly;8.2004928471153e-10!GO:0006915;apoptosis;1.09464642515731e-09!GO:0005789;endoplasmic reticulum membrane;1.16867316230687e-09!GO:0006464;protein modification process;1.83410908370444e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.27795495764011e-09!GO:0031497;chromatin assembly;3.09023981071299e-09!GO:0006261;DNA-dependent DNA replication;4.35918498651393e-09!GO:0016881;acid-amino acid ligase activity;5.75008059888802e-09!GO:0008219;cell death;5.97539059400921e-09!GO:0016265;death;5.97539059400921e-09!GO:0000775;chromosome, pericentric region;6.49210849567423e-09!GO:0032774;RNA biosynthetic process;6.62922547313633e-09!GO:0043687;post-translational protein modification;6.97449742677758e-09!GO:0030532;small nuclear ribonucleoprotein complex;7.39778038943318e-09!GO:0006351;transcription, DNA-dependent;9.44344184516614e-09!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.1440674463469e-08!GO:0005819;spindle;1.36778188991281e-08!GO:0006461;protein complex assembly;1.52445486554874e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.55794233800744e-08!GO:0043566;structure-specific DNA binding;1.65797058753795e-08!GO:0016779;nucleotidyltransferase activity;3.72848477976462e-08!GO:0009060;aerobic respiration;3.85103147742057e-08!GO:0045449;regulation of transcription;6.44686649804844e-08!GO:0015986;ATP synthesis coupled proton transport;6.47984527066309e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.47984527066309e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.06981797065806e-08!GO:0004812;aminoacyl-tRNA ligase activity;7.06981797065806e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.06981797065806e-08!GO:0016568;chromatin modification;7.06981797065806e-08!GO:0009055;electron carrier activity;7.65110041805958e-08!GO:0005768;endosome;7.83309703305158e-08!GO:0005667;transcription factor complex;9.08984812463676e-08!GO:0019829;cation-transporting ATPase activity;9.67940778067652e-08!GO:0009259;ribonucleotide metabolic process;9.73048576748925e-08!GO:0017038;protein import;1.16880150321605e-07!GO:0043038;amino acid activation;1.2365157480946e-07!GO:0006418;tRNA aminoacylation for protein translation;1.2365157480946e-07!GO:0043039;tRNA aminoacylation;1.2365157480946e-07!GO:0016072;rRNA metabolic process;1.31091783595528e-07!GO:0003677;DNA binding;1.31091783595528e-07!GO:0006364;rRNA processing;1.35535963113644e-07!GO:0051188;cofactor biosynthetic process;1.38038386290245e-07!GO:0003697;single-stranded DNA binding;1.53119885846535e-07!GO:0032446;protein modification by small protein conjugation;1.57139535004095e-07!GO:0045333;cellular respiration;1.60146195789297e-07!GO:0005813;centrosome;1.81769780673424e-07!GO:0016567;protein ubiquitination;2.43949246151176e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.96264504730731e-07!GO:0006163;purine nucleotide metabolic process;3.12259394445323e-07!GO:0005815;microtubule organizing center;3.24265763890197e-07!GO:0000245;spliceosome assembly;3.89058621391562e-07!GO:0051246;regulation of protein metabolic process;4.05356541571272e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.08324956071381e-07!GO:0007051;spindle organization and biogenesis;4.74021911273749e-07!GO:0009260;ribonucleotide biosynthetic process;5.10943077635568e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.53178492708597e-07!GO:0006164;purine nucleotide biosynthetic process;5.93249665696262e-07!GO:0006355;regulation of transcription, DNA-dependent;7.38743807163483e-07!GO:0048523;negative regulation of cellular process;8.44841219537137e-07!GO:0005657;replication fork;9.48268065777239e-07!GO:0005793;ER-Golgi intermediate compartment;9.70172776423192e-07!GO:0009108;coenzyme biosynthetic process;9.85869360260975e-07!GO:0004298;threonine endopeptidase activity;1.07865179998073e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.11696165254655e-06!GO:0043623;cellular protein complex assembly;1.19489525531941e-06!GO:0031324;negative regulation of cellular metabolic process;1.2288847585655e-06!GO:0009150;purine ribonucleotide metabolic process;1.2983316701228e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.37626249748413e-06!GO:0007005;mitochondrion organization and biogenesis;1.43443642432585e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.54139633058264e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.64742391650343e-06!GO:0006754;ATP biosynthetic process;1.67037918709639e-06!GO:0006753;nucleoside phosphate metabolic process;1.67037918709639e-06!GO:0000151;ubiquitin ligase complex;1.74426249342005e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.86250069892539e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.86250069892539e-06!GO:0009152;purine ribonucleotide biosynthetic process;2.46003565734423e-06!GO:0006099;tricarboxylic acid cycle;2.72572267368156e-06!GO:0046356;acetyl-CoA catabolic process;2.72572267368156e-06!GO:0003724;RNA helicase activity;2.76040531991661e-06!GO:0048475;coated membrane;2.76591602272076e-06!GO:0030117;membrane coat;2.76591602272076e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.0581328166232e-06!GO:0042981;regulation of apoptosis;3.5754653246748e-06!GO:0003682;chromatin binding;3.82068536144146e-06!GO:0009056;catabolic process;3.8213784753531e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.90935684635892e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.90935684635892e-06!GO:0051427;hormone receptor binding;3.93399510857212e-06!GO:0043067;regulation of programmed cell death;4.02381418589826e-06!GO:0009141;nucleoside triphosphate metabolic process;4.30784408486832e-06!GO:0046034;ATP metabolic process;4.31991208413795e-06!GO:0009892;negative regulation of metabolic process;4.37975815416308e-06!GO:0006613;cotranslational protein targeting to membrane;4.52999920208455e-06!GO:0051325;interphase;4.66015490264089e-06!GO:0051329;interphase of mitotic cell cycle;5.00980744916686e-06!GO:0008094;DNA-dependent ATPase activity;5.13987798791145e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.04541203225666e-06!GO:0009144;purine nucleoside triphosphate metabolic process;6.04541203225666e-06!GO:0016787;hydrolase activity;6.29399035086564e-06!GO:0045259;proton-transporting ATP synthase complex;7.37425924278725e-06!GO:0005525;GTP binding;7.6826546825937e-06!GO:0000786;nucleosome;8.0068847916276e-06!GO:0051170;nuclear import;8.17978476322502e-06!GO:0051168;nuclear export;8.32506876746763e-06!GO:0065007;biological regulation;8.37356295311525e-06!GO:0003713;transcription coactivator activity;8.41628952138329e-06!GO:0035257;nuclear hormone receptor binding;8.62415505869825e-06!GO:0016740;transferase activity;9.06286509678466e-06!GO:0006084;acetyl-CoA metabolic process;1.09407162979091e-05!GO:0006916;anti-apoptosis;1.21003731512494e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.22134610381497e-05!GO:0016564;transcription repressor activity;1.24359502485324e-05!GO:0003924;GTPase activity;1.4558970856363e-05!GO:0030120;vesicle coat;1.45667086764824e-05!GO:0030662;coated vesicle membrane;1.45667086764824e-05!GO:0043069;negative regulation of programmed cell death;1.45847426912389e-05!GO:0006752;group transfer coenzyme metabolic process;1.59749124228481e-05!GO:0016563;transcription activator activity;1.68765552721344e-05!GO:0044440;endosomal part;1.75072756413939e-05!GO:0010008;endosome membrane;1.75072756413939e-05!GO:0009117;nucleotide metabolic process;1.83116180492435e-05!GO:0006612;protein targeting to membrane;1.99683586278872e-05!GO:0048519;negative regulation of biological process;2.12962602218707e-05!GO:0003690;double-stranded DNA binding;2.39372949557745e-05!GO:0006606;protein import into nucleus;2.57549122601353e-05!GO:0043066;negative regulation of apoptosis;2.6034330376925e-05!GO:0000075;cell cycle checkpoint;2.62300146352041e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.64825510365414e-05!GO:0009109;coenzyme catabolic process;3.49531853007535e-05!GO:0006414;translational elongation;3.87770572587401e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;3.98597493033504e-05!GO:0044431;Golgi apparatus part;4.88040091682905e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.54325565813297e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.74663658232512e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.80219601799973e-05!GO:0005762;mitochondrial large ribosomal subunit;6.85439621889543e-05!GO:0000315;organellar large ribosomal subunit;6.85439621889543e-05!GO:0016363;nuclear matrix;6.88329796181552e-05!GO:0045786;negative regulation of progression through cell cycle;7.13883045640076e-05!GO:0051052;regulation of DNA metabolic process;8.36030150847045e-05!GO:0005798;Golgi-associated vesicle;8.57135861261983e-05!GO:0008186;RNA-dependent ATPase activity;9.12471252418803e-05!GO:0008654;phospholipid biosynthetic process;9.26431089931067e-05!GO:0051187;cofactor catabolic process;9.54624783607612e-05!GO:0032561;guanyl ribonucleotide binding;9.91043601077028e-05!GO:0019001;guanyl nucleotide binding;9.91043601077028e-05!GO:0006302;double-strand break repair;0.000100246695854274!GO:0006793;phosphorus metabolic process;0.000104092411036663!GO:0006796;phosphate metabolic process;0.000104092411036663!GO:0043021;ribonucleoprotein binding;0.000126053642653739!GO:0006402;mRNA catabolic process;0.000136745349404053!GO:0000776;kinetochore;0.000137099970373871!GO:0007264;small GTPase mediated signal transduction;0.000138372273349164!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000138541565414787!GO:0042802;identical protein binding;0.000146643373207483!GO:0003684;damaged DNA binding;0.000152412091156914!GO:0048471;perinuclear region of cytoplasm;0.000152620209273718!GO:0007010;cytoskeleton organization and biogenesis;0.000167647716964284!GO:0000314;organellar small ribosomal subunit;0.000167647716964284!GO:0005763;mitochondrial small ribosomal subunit;0.000167647716964284!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000169787193480625!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0001891289489212!GO:0005773;vacuole;0.00020601465742801!GO:0003714;transcription corepressor activity;0.000222172862365122!GO:0003729;mRNA binding;0.00022248802857181!GO:0031988;membrane-bound vesicle;0.000243287169787005!GO:0016481;negative regulation of transcription;0.00026186183493898!GO:0005770;late endosome;0.00027698448900639!GO:0004004;ATP-dependent RNA helicase activity;0.00028954614336003!GO:0016023;cytoplasmic membrane-bound vesicle;0.000291048748126913!GO:0005874;microtubule;0.000303870768710447!GO:0031252;leading edge;0.000331492429409968!GO:0031982;vesicle;0.000331492429409968!GO:0003702;RNA polymerase II transcription factor activity;0.000400849081858862!GO:0031410;cytoplasmic vesicle;0.00041784695250221!GO:0006401;RNA catabolic process;0.000426835713940217!GO:0007088;regulation of mitosis;0.00050625929387706!GO:0051789;response to protein stimulus;0.000506479393876347!GO:0006986;response to unfolded protein;0.000506479393876347!GO:0003899;DNA-directed RNA polymerase activity;0.000538403615889681!GO:0006839;mitochondrial transport;0.000669300288996825!GO:0007059;chromosome segregation;0.000704842335305099!GO:0005885;Arp2/3 protein complex;0.000711211391354376!GO:0007017;microtubule-based process;0.000720447486255371!GO:0005048;signal sequence binding;0.000726185778296947!GO:0005876;spindle microtubule;0.000732698300471933!GO:0007052;mitotic spindle organization and biogenesis;0.000747137649004273!GO:0003746;translation elongation factor activity;0.000749767519094007!GO:0000323;lytic vacuole;0.000799616966184683!GO:0005764;lysosome;0.000799616966184683!GO:0005788;endoplasmic reticulum lumen;0.00084544403250287!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00085447354010925!GO:0006611;protein export from nucleus;0.0008750542906128!GO:0003678;DNA helicase activity;0.000916633655364384!GO:0016310;phosphorylation;0.000992288352332271!GO:0005769;early endosome;0.00100811083114701!GO:0000228;nuclear chromosome;0.0010523489384837!GO:0045893;positive regulation of transcription, DNA-dependent;0.0010584795782481!GO:0042770;DNA damage response, signal transduction;0.00106471719708229!GO:0000049;tRNA binding;0.00111966175888907!GO:0045941;positive regulation of transcription;0.00116378074283618!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00116928324861222!GO:0006417;regulation of translation;0.00117934852976574!GO:0048500;signal recognition particle;0.00120299234876682!GO:0044452;nucleolar part;0.00128160349815364!GO:0019899;enzyme binding;0.00131534826539972!GO:0000059;protein import into nucleus, docking;0.00132423961627259!GO:0032508;DNA duplex unwinding;0.00135702325957519!GO:0032392;DNA geometric change;0.00135702325957519!GO:0051920;peroxiredoxin activity;0.00136514865196341!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00137706174391083!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00137706174391083!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00137706174391083!GO:0030867;rough endoplasmic reticulum membrane;0.00137706174391083!GO:0046474;glycerophospholipid biosynthetic process;0.00137978682120524!GO:0008033;tRNA processing;0.00138127663172454!GO:0051287;NAD binding;0.00140135401464551!GO:0006405;RNA export from nucleus;0.00140401657925583!GO:0051252;regulation of RNA metabolic process;0.00141987967374366!GO:0000139;Golgi membrane;0.00147093515884722!GO:0005684;U2-dependent spliceosome;0.00147332857690146!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00155426189720993!GO:0006268;DNA unwinding during replication;0.00155588191512615!GO:0000086;G2/M transition of mitotic cell cycle;0.00158049978222249!GO:0043681;protein import into mitochondrion;0.00167626398241878!GO:0006352;transcription initiation;0.00168299695275482!GO:0030118;clathrin coat;0.00172176923442885!GO:0016251;general RNA polymerase II transcription factor activity;0.00173296607028603!GO:0009165;nucleotide biosynthetic process;0.0018113179432573!GO:0031124;mRNA 3'-end processing;0.00187789702576726!GO:0008312;7S RNA binding;0.00195048306204299!GO:0006891;intra-Golgi vesicle-mediated transport;0.00198630039016741!GO:0008601;protein phosphatase type 2A regulator activity;0.00205251346865192!GO:0008234;cysteine-type peptidase activity;0.00209807802347853!GO:0046489;phosphoinositide biosynthetic process;0.00227814353891944!GO:0016741;transferase activity, transferring one-carbon groups;0.00229425226435885!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00230586889531243!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00232531735828157!GO:0045892;negative regulation of transcription, DNA-dependent;0.00232531735828157!GO:0019783;small conjugating protein-specific protease activity;0.00244691360874446!GO:0008139;nuclear localization sequence binding;0.00245125161218397!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00257204682991011!GO:0045047;protein targeting to ER;0.00257204682991011!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00260797829035676!GO:0046966;thyroid hormone receptor binding;0.00261647037360131!GO:0000792;heterochromatin;0.00268531180507158!GO:0004527;exonuclease activity;0.00270546942603573!GO:0005637;nuclear inner membrane;0.00277439221703708!GO:0007093;mitotic cell cycle checkpoint;0.00287569459865724!GO:0008022;protein C-terminus binding;0.00288708278715798!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00297032860015977!GO:0015631;tubulin binding;0.00305308060916136!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00324470996798492!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00328410910214906!GO:0008168;methyltransferase activity;0.00335879969794513!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00346026243179702!GO:0043488;regulation of mRNA stability;0.00362869229252018!GO:0043487;regulation of RNA stability;0.00362869229252018!GO:0030132;clathrin coat of coated pit;0.00363642993073354!GO:0015980;energy derivation by oxidation of organic compounds;0.0036457042822356!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00368593410741958!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00368593410741958!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00369960041345223!GO:0004843;ubiquitin-specific protease activity;0.0037341546268684!GO:0016859;cis-trans isomerase activity;0.00380411213322001!GO:0016853;isomerase activity;0.0040500886770382!GO:0045045;secretory pathway;0.00413536088066198!GO:0006626;protein targeting to mitochondrion;0.00424720283393731!GO:0031123;RNA 3'-end processing;0.00427012001473408!GO:0043596;nuclear replication fork;0.00436178810943687!GO:0006275;regulation of DNA replication;0.0045473829669518!GO:0050662;coenzyme binding;0.00469870792966026!GO:0006310;DNA recombination;0.00473893119444321!GO:0000922;spindle pole;0.00480100929854731!GO:0048522;positive regulation of cellular process;0.00489567981817619!GO:0006284;base-excision repair;0.00490340508404825!GO:0006541;glutamine metabolic process;0.00492301740334899!GO:0033116;ER-Golgi intermediate compartment membrane;0.00494366149053638!GO:0035258;steroid hormone receptor binding;0.00505677946054841!GO:0006270;DNA replication initiation;0.00509478033153095!GO:0030131;clathrin adaptor complex;0.00515402758328815!GO:0008270;zinc ion binding;0.00554395056959941!GO:0031072;heat shock protein binding;0.00564053885678935!GO:0015992;proton transport;0.00571898881817275!GO:0042393;histone binding;0.00589296493395612!GO:0006818;hydrogen transport;0.00591445591401993!GO:0009112;nucleobase metabolic process;0.00597695801063675!GO:0000725;recombinational repair;0.00609518199250661!GO:0000724;double-strand break repair via homologous recombination;0.00609518199250661!GO:0005791;rough endoplasmic reticulum;0.00610771706984354!GO:0046983;protein dimerization activity;0.00613102156408479!GO:0004221;ubiquitin thiolesterase activity;0.00626446822200185!GO:0031326;regulation of cellular biosynthetic process;0.00634056083858494!GO:0030521;androgen receptor signaling pathway;0.00652782293844819!GO:0006144;purine base metabolic process;0.00661061431666829!GO:0006650;glycerophospholipid metabolic process;0.00661492310482622!GO:0016197;endosome transport;0.00693127644998266!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00693127644998266!GO:0015399;primary active transmembrane transporter activity;0.00693127644998266!GO:0030119;AP-type membrane coat adaptor complex;0.00695445601474013!GO:0030036;actin cytoskeleton organization and biogenesis;0.00697518484597763!GO:0043284;biopolymer biosynthetic process;0.00703833866055519!GO:0045454;cell redox homeostasis;0.00726044183818352!GO:0030663;COPI coated vesicle membrane;0.00726044183818352!GO:0030126;COPI vesicle coat;0.00726044183818352!GO:0016491;oxidoreductase activity;0.00726949526445936!GO:0030658;transport vesicle membrane;0.00751242800610193!GO:0006383;transcription from RNA polymerase III promoter;0.00753027139987394!GO:0030027;lamellipodium;0.00764395747494977!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00766077630061713!GO:0016584;nucleosome positioning;0.00768907265735221!GO:0007006;mitochondrial membrane organization and biogenesis;0.0076951006289757!GO:0048487;beta-tubulin binding;0.00788927215689803!GO:0016272;prefoldin complex;0.00795895474959029!GO:0040029;regulation of gene expression, epigenetic;0.00809753906993765!GO:0004674;protein serine/threonine kinase activity;0.00830984772655519!GO:0044454;nuclear chromosome part;0.0083113229669709!GO:0004518;nuclease activity;0.0083197118140315!GO:0009116;nucleoside metabolic process;0.00839783672163392!GO:0016126;sterol biosynthetic process;0.0086496655699093!GO:0051101;regulation of DNA binding;0.00896256492762504!GO:0003711;transcription elongation regulator activity;0.00896256492762504!GO:0006338;chromatin remodeling;0.00913894539116743!GO:0000152;nuclear ubiquitin ligase complex;0.00944001449479523!GO:0009615;response to virus;0.00945696198041952!GO:0001726;ruffle;0.00945801808708014!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00955842105209448!GO:0005905;coated pit;0.00961998916275819!GO:0019843;rRNA binding;0.00982144249782354!GO:0006091;generation of precursor metabolites and energy;0.00982805240409019!GO:0051087;chaperone binding;0.0101625980870376!GO:0006979;response to oxidative stress;0.0102441062025757!GO:0030384;phosphoinositide metabolic process;0.0102444045483376!GO:0006378;mRNA polyadenylation;0.010480307121396!GO:0043433;negative regulation of transcription factor activity;0.0107126963989083!GO:0000159;protein phosphatase type 2A complex;0.010713045225878!GO:0030518;steroid hormone receptor signaling pathway;0.0113064354539871!GO:0032259;methylation;0.0116102256102584!GO:0043022;ribosome binding;0.0119276352607845!GO:0001558;regulation of cell growth;0.0119424350737874!GO:0046467;membrane lipid biosynthetic process;0.0121385641636641!GO:0008629;induction of apoptosis by intracellular signals;0.0122841792684207!GO:0022890;inorganic cation transmembrane transporter activity;0.0123173799444652!GO:0030133;transport vesicle;0.012362899043978!GO:0016791;phosphoric monoester hydrolase activity;0.0128088325210421!GO:0000339;RNA cap binding;0.0132305751827677!GO:0051098;regulation of binding;0.0136875432764393!GO:0003725;double-stranded RNA binding;0.0137366391019406!GO:0043601;nuclear replisome;0.0138605091359548!GO:0030894;replisome;0.0138605091359548!GO:0051540;metal cluster binding;0.013892439862837!GO:0051536;iron-sulfur cluster binding;0.013892439862837!GO:0006509;membrane protein ectodomain proteolysis;0.0140350003373797!GO:0033619;membrane protein proteolysis;0.0140350003373797!GO:0005832;chaperonin-containing T-complex;0.0140350003373797!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0140445326646352!GO:0008287;protein serine/threonine phosphatase complex;0.0140445326646352!GO:0032984;macromolecular complex disassembly;0.014118037713836!GO:0000910;cytokinesis;0.0147564904493707!GO:0043624;cellular protein complex disassembly;0.0150533941506!GO:0006376;mRNA splice site selection;0.0150948734772858!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0150948734772858!GO:0006289;nucleotide-excision repair;0.0151953751361796!GO:0006767;water-soluble vitamin metabolic process;0.0154793881121484!GO:0016790;thiolester hydrolase activity;0.0157144818196593!GO:0043130;ubiquitin binding;0.0163526850972206!GO:0032182;small conjugating protein binding;0.0163526850972206!GO:0030660;Golgi-associated vesicle membrane;0.0166254012170197!GO:0000819;sister chromatid segregation;0.0176563632164581!GO:0008610;lipid biosynthetic process;0.0176775351288217!GO:0006506;GPI anchor biosynthetic process;0.0178199398551834!GO:0000790;nuclear chromatin;0.0178199398551834!GO:0005663;DNA replication factor C complex;0.0178460337404615!GO:0043241;protein complex disassembly;0.0180650447956556!GO:0004003;ATP-dependent DNA helicase activity;0.0182111591302608!GO:0046483;heterocycle metabolic process;0.0184009962203303!GO:0045947;negative regulation of translational initiation;0.0184527544414589!GO:0030880;RNA polymerase complex;0.0185051491107888!GO:0008250;oligosaccharyl transferase complex;0.0185089944773664!GO:0030137;COPI-coated vesicle;0.0186295038324177!GO:0043414;biopolymer methylation;0.0186694303200112!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0186963827081708!GO:0043189;H4/H2A histone acetyltransferase complex;0.018858059784799!GO:0030134;ER to Golgi transport vesicle;0.0189103867683542!GO:0009119;ribonucleoside metabolic process;0.0193049854378449!GO:0016044;membrane organization and biogenesis;0.0194173478285314!GO:0031902;late endosome membrane;0.0194648308890146!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0199414793839929!GO:0009889;regulation of biosynthetic process;0.0199414793839929!GO:0030029;actin filament-based process;0.0200784059532049!GO:0005669;transcription factor TFIID complex;0.0203279159038611!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0203279159038611!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.0204988152946312!GO:0000070;mitotic sister chromatid segregation;0.0207456623384626!GO:0008538;proteasome activator activity;0.0208922355031629!GO:0004576;oligosaccharyl transferase activity;0.0210958849716897!GO:0046128;purine ribonucleoside metabolic process;0.0216704487524032!GO:0042278;purine nucleoside metabolic process;0.0216704487524032!GO:0050681;androgen receptor binding;0.0220627207317408!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0222455961988776!GO:0035267;NuA4 histone acetyltransferase complex;0.0223977471530208!GO:0043492;ATPase activity, coupled to movement of substances;0.0225588465175492!GO:0008092;cytoskeletal protein binding;0.0225588465175492!GO:0005938;cell cortex;0.0226460808755096!GO:0007265;Ras protein signal transduction;0.0228791577259411!GO:0016408;C-acyltransferase activity;0.0236156920993545!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0236292616885455!GO:0007243;protein kinase cascade;0.0237551529143282!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0237613423247415!GO:0065009;regulation of a molecular function;0.0240545777952473!GO:0008632;apoptotic program;0.0240816045298847!GO:0006892;post-Golgi vesicle-mediated transport;0.0247515880681546!GO:0043065;positive regulation of apoptosis;0.025154117597135!GO:0019752;carboxylic acid metabolic process;0.026021503560683!GO:0000096;sulfur amino acid metabolic process;0.026021503560683!GO:0030176;integral to endoplasmic reticulum membrane;0.0266406036208388!GO:0046914;transition metal ion binding;0.0267769915086858!GO:0017166;vinculin binding;0.0270017610573291!GO:0008017;microtubule binding;0.0271528440080574!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0274861241951799!GO:0005758;mitochondrial intermembrane space;0.0275323803307977!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0278046465652217!GO:0000123;histone acetyltransferase complex;0.0278125618717125!GO:0006505;GPI anchor metabolic process;0.0281140797776966!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.028197657947881!GO:0031529;ruffle organization and biogenesis;0.0288875658400013!GO:0005869;dynactin complex;0.0288875658400013!GO:0000082;G1/S transition of mitotic cell cycle;0.0294149780727473!GO:0006082;organic acid metabolic process;0.0295406287162012!GO:0030031;cell projection biogenesis;0.0295656539628972!GO:0033673;negative regulation of kinase activity;0.0298974752462637!GO:0006469;negative regulation of protein kinase activity;0.0298974752462637!GO:0030522;intracellular receptor-mediated signaling pathway;0.0301380919527395!GO:0008361;regulation of cell size;0.0302277831131431!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0307193015789659!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0307193015789659!GO:0045936;negative regulation of phosphate metabolic process;0.0308836868235508!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0310476326870389!GO:0000428;DNA-directed RNA polymerase complex;0.0310476326870389!GO:0008630;DNA damage response, signal transduction resulting in induction of apoptosis;0.0314176632642015!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.031663591161709!GO:0015002;heme-copper terminal oxidase activity;0.031663591161709!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.031663591161709!GO:0004129;cytochrome-c oxidase activity;0.031663591161709!GO:0031968;organelle outer membrane;0.031663591161709!GO:0043068;positive regulation of programmed cell death;0.0317558454316562!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0318049872282374!GO:0051053;negative regulation of DNA metabolic process;0.0319008315986932!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0321287017347427!GO:0019867;outer membrane;0.0323679587041108!GO:0042769;DNA damage response, detection of DNA damage;0.0325501021898029!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0326783319690345!GO:0000209;protein polyubiquitination;0.0327003180092523!GO:0006301;postreplication repair;0.03375134577064!GO:0006984;ER-nuclear signaling pathway;0.0342059797235945!GO:0005862;muscle thin filament tropomyosin;0.0344936477719492!GO:0005784;translocon complex;0.0344936477719492!GO:0022406;membrane docking;0.034737896989131!GO:0048278;vesicle docking;0.034737896989131!GO:0042026;protein refolding;0.0349832594604246!GO:0031647;regulation of protein stability;0.0349832594604246!GO:0031570;DNA integrity checkpoint;0.0354794382744335!GO:0008408;3'-5' exonuclease activity;0.0370469164584727!GO:0004860;protein kinase inhibitor activity;0.0371265118686765!GO:0004532;exoribonuclease activity;0.0372668039758598!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0372668039758598!GO:0016049;cell growth;0.0379595756663838!GO:0006695;cholesterol biosynthetic process;0.0379700821219869!GO:0006733;oxidoreduction coenzyme metabolic process;0.0395144925170915!GO:0030127;COPII vesicle coat;0.0396551135164774!GO:0012507;ER to Golgi transport vesicle membrane;0.0396551135164774!GO:0005774;vacuolar membrane;0.0401445604770679!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0405902995188522!GO:0051059;NF-kappaB binding;0.0406711142511383!GO:0051348;negative regulation of transferase activity;0.0425831923838067!GO:0046519;sphingoid metabolic process;0.0425908147858506!GO:0031970;organelle envelope lumen;0.0426784680678693!GO:0004300;enoyl-CoA hydratase activity;0.0437117227287984!GO:0031628;opioid receptor binding;0.0437117227287984!GO:0031852;mu-type opioid receptor binding;0.0437117227287984!GO:0043631;RNA polyadenylation;0.0437157848191054!GO:0032405;MutLalpha complex binding;0.0443016821116064!GO:0006643;membrane lipid metabolic process;0.0443576594846412!GO:0005680;anaphase-promoting complex;0.044361134083816!GO:0006769;nicotinamide metabolic process;0.0447533030851458!GO:0008536;Ran GTPase binding;0.0448163277255254!GO:0006672;ceramide metabolic process;0.0450412708811842!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0453141870962253!GO:0046822;regulation of nucleocytoplasmic transport;0.0458689874512331!GO:0008537;proteasome activator complex;0.0462327724899004!GO:0007050;cell cycle arrest;0.0462574325752946!GO:0005741;mitochondrial outer membrane;0.0468508988828223!GO:0016615;malate dehydrogenase activity;0.0473548177981737!GO:0005720;nuclear heterochromatin;0.0474566867069359!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0483993520097389!GO:0005856;cytoskeleton;0.0486903643684794!GO:0007021;tubulin folding;0.0492313256922746!GO:0003923;GPI-anchor transamidase activity;0.049443561681741!GO:0016255;attachment of GPI anchor to protein;0.049443561681741!GO:0042765;GPI-anchor transamidase complex;0.049443561681741!GO:0006904;vesicle docking during exocytosis;0.0496664644868416
|sample_id=10470
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=gall bladder
|top_motifs=SNAI1..3:2.22120353154;ZEB1:1.86001396966;LMO2:1.79188260922;PITX1..3:1.79019404893;FOXQ1:1.70907573582;HOX{A6,A7,B6,B7}:1.68003878907;STAT1,3:1.6273791309;IRF7:1.60474538523;ZNF384:1.49226191444;E2F1..5:1.47558735266;FOXL1:1.45662552213;NKX2-3_NKX2-5:1.40482923189;NFY{A,B,C}:1.35887815356;XCPE1{core}:1.29917739316;TEF:1.28226466195;ZBTB16:1.26883090327;CDC5L:1.24588938401;TFDP1:1.14586032772;POU2F1..3:1.03488356771;SP1:1.01682452928;MYOD1:1.0067427355;TEAD1:1.00168584339;NKX6-1,2:0.989903751639;PAX1,9:0.988270872125;FOXD3:0.969478246211;NKX2-1,4:0.904749658281;FOXM1:0.903774436216;EVI1:0.891103334038;LHX3,4:0.871884211067;STAT5{A,B}:0.858344501973;RBPJ:0.851017270892;EP300:0.847721252816;NRF1:0.831195752007;PAX4:0.830651591536;RORA:0.82790415798;FOXP1:0.827506908906;FOXN1:0.819951556065;LEF1_TCF7_TCF7L1,2:0.778754444596;ELK1,4_GABP{A,B1}:0.758342252481;IRF1,2:0.753091972984;ZNF148:0.752888746689;PDX1:0.667270811225;ONECUT1,2:0.633478667769;GFI1:0.586233421427;ZNF143:0.578029735917;RFX2..5_RFXANK_RFXAP:0.530205173176;IKZF2:0.518203123452;FOX{I1,J2}:0.512277101966;HMGA1,2:0.511932698033;RFX1:0.505618388898;CDX1,2,4:0.462238103157;SOX{8,9,10}:0.460493785471;NR6A1:0.44761727899;AIRE:0.447140403288;HOXA9_MEIS1:0.422265812071;DBP:0.413892601168;TBX4,5:0.37847097059;VSX1,2:0.367765350128;HNF1A:0.344552083323;ADNP_IRX_SIX_ZHX:0.306534434155;FOXO1,3,4:0.298605823724;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.282209057789;FOX{D1,D2}:0.280849134512;PAX8:0.274146220429;RREB1:0.265616375823;TAL1_TCF{3,4,12}:0.245677807756;PAX5:0.205649363392;PBX1:0.19701514668;MTF1:0.195326531332;TFAP2{A,C}:0.130222891213;MED-1{core}:0.127282391168;TOPORS:0.124811240292;GZF1:0.11939590837;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.107173953635;BREu{core}:0.102153752525;HOX{A4,D4}:0.100580868638;ZNF423:0.096422288613;MTE{core}:0.0949548458551;HNF4A_NR2F1,2:0.0801982488239;ARID5B:0.0516888797497;ZFP161:0.0365888444006;MYB:0.0320930767077;TFAP2B:0.00706132942081;ATF4:0.0037897731093;BPTF:0.00117242841381;NKX3-1:-0.0315615209672;POU1F1:-0.039083088081;CUX2:-0.0675889736445;HBP1_HMGB_SSRP1_UBTF:-0.0708899075429;PAX3,7:-0.0730258742859;NFE2L2:-0.0737783806579;FOXA2:-0.088553760859;OCT4_SOX2{dimer}:-0.098194003611;PRRX1,2:-0.115158531196;IKZF1:-0.156579762819;MEF2{A,B,C,D}:-0.161107730942;ATF2:-0.168230192766;TP53:-0.171264145619;TBP:-0.172474089474;YY1:-0.177093504251;SOX5:-0.179544413917;HIF1A:-0.179570217296;T:-0.181512206751;ALX4:-0.192201642312;TLX1..3_NFIC{dimer}:-0.193378546636;STAT2,4,6:-0.196646078762;KLF4:-0.204723203457;bHLH_family:-0.20899979715;UFEwm:-0.218570054634;FOS_FOS{B,L1}_JUN{B,D}:-0.221297640762;ZBTB6:-0.226474836958;SOX2:-0.226756069413;HSF1,2:-0.234536595581;PRDM1:-0.245705363886;ATF5_CREB3:-0.251328576492;FOXP3:-0.262347793027;PATZ1:-0.262491884265;EBF1:-0.265969022878;ESR1:-0.278584462699;POU5F1:-0.282125017381;MYBL2:-0.291406246342;NKX3-2:-0.291791625368;JUN:-0.306982274885;FOSL2:-0.308213613408;NFKB1_REL_RELA:-0.318351527615;REST:-0.322240118323;NFIX:-0.333718741561;ELF1,2,4:-0.334490772659;HIC1:-0.357549941556;GATA4:-0.35926125027;MAZ:-0.366639166119;ESRRA:-0.37097540886;HAND1,2:-0.378244075014;BACH2:-0.379232470467;EN1,2:-0.391352806334;TFAP4:-0.393963558033;CREB1:-0.426723692931;NR1H4:-0.448687595049;GTF2I:-0.460083186138;GLI1..3:-0.469096697959;GCM1,2:-0.487865545387;GATA6:-0.52453158627;PPARG:-0.541616549906;NFIL3:-0.562983035943;DMAP1_NCOR{1,2}_SMARC:-0.571011534276;ZIC1..3:-0.57147076715;HLF:-0.578908329348;CEBPA,B_DDIT3:-0.579648499782;SPIB:-0.583732674113;NR5A1,2:-0.586372038117;NFE2:-0.58981526833;ALX1:-0.600678922106;AR:-0.615031228207;TFCP2:-0.615555738216;SREBF1,2:-0.619248590516;RXRA_VDR{dimer}:-0.62744170939;HOX{A5,B5}:-0.633323821004;HES1:-0.639819333418;CRX:-0.666171825536;SRF:-0.669526506705;TLX2:-0.673392940566;PAX2:-0.680091826182;EGR1..3:-0.730371462997;SOX17:-0.734952112022;NANOG:-0.741562719041;SPI1:-0.74686620387;ETS1,2:-0.75596835585;TGIF1:-0.794862028964;MZF1:-0.803767064998;FOX{F1,F2,J1}:-0.848766476443;MYFfamily:-0.870840505459;SPZ1:-0.887243619195;NHLH1,2:-0.893119929448;RUNX1..3:-0.909653565417;GFI1B:-0.914267766526;MAFB:-0.965144749969;POU6F1:-1.01001029466;NFE2L1:-1.0100633765;AHR_ARNT_ARNT2:-1.01477418024;GTF2A1,2:-1.02051304809;ATF6:-1.1402303813;RXR{A,B,G}:-1.17230778248;POU3F1..4:-1.18070064095;NR3C1:-1.19243993398;NKX2-2,8:-1.33016381443;PAX6:-1.35082586387;XBP1:-1.41814537024;ZNF238:-1.66861534056;HMX1:-2.01018337396;NFATC1..3:-2.04340242309;NANOG{mouse}:-2.24697790537;SMAD1..7,9:-2.51377167375
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10470-106I2;search_select_hide=table117:FF:10470-106I2
}}
}}

Latest revision as of 14:25, 3 June 2020

Name:gall bladder carcinoma cell line:TGBC14TKB
Species:Human (Homo sapiens)
Library ID:CNhs11256
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuegall bladder
dev stageNA
sexfemale
ageunknown
cell typeunclassifiable
cell lineTGBC14TKB
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005108
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11256 CAGE DRX007888 DRR008760
Accession ID Hg19

Library idBAMCTSS
CNhs11256 DRZ000185 DRZ001570
Accession ID Hg38

Library idBAMCTSS
CNhs11256 DRZ011535 DRZ012920
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0699
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.529
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.0776
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0458
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0291
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0699
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.316
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0886
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0791
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.441
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.0776
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.435
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.143
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.107
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0486
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.483
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed1.077
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11256

Jaspar motifP-value
MA0002.21.75861e-5
MA0003.10.941
MA0004.10.821
MA0006.10.341
MA0007.10.554
MA0009.10.736
MA0014.10.155
MA0017.10.519
MA0018.20.44
MA0019.10.929
MA0024.12.10024e-6
MA0025.10.998
MA0027.10.441
MA0028.10.00222
MA0029.10.895
MA0030.10.127
MA0031.10.501
MA0035.20.97
MA0038.10.0135
MA0039.27.42152e-4
MA0040.10.00823
MA0041.10.183
MA0042.10.19
MA0043.10.336
MA0046.10.23
MA0047.20.547
MA0048.10.856
MA0050.19.0097e-7
MA0051.14.78796e-5
MA0052.10.221
MA0055.10.00463
MA0057.10.941
MA0058.10.552
MA0059.10.154
MA0060.17.00746e-10
MA0061.18.93618e-4
MA0062.20.00509
MA0065.20.42
MA0066.10.258
MA0067.10.143
MA0068.10.0522
MA0069.10.408
MA0070.10.24
MA0071.10.699
MA0072.10.695
MA0073.10.77
MA0074.10.806
MA0076.10.00228
MA0077.10.65
MA0078.10.444
MA0079.20.88
MA0080.21.02071e-6
MA0081.10.0105
MA0083.10.117
MA0084.10.036
MA0087.10.373
MA0088.10.547
MA0090.10.0416
MA0091.10.00187
MA0092.10.232
MA0093.10.845
MA0099.29.2937e-7
MA0100.10.922
MA0101.10.0557
MA0102.20.815
MA0103.14.53539e-6
MA0104.20.684
MA0105.16.74548e-6
MA0106.10.837
MA0107.10.0229
MA0108.20.317
MA0111.10.75
MA0112.20.102
MA0113.10.199
MA0114.10.288
MA0115.10.0932
MA0116.10.0115
MA0117.10.16
MA0119.10.578
MA0122.10.691
MA0124.10.943
MA0125.10.0326
MA0131.10.825
MA0135.10.0242
MA0136.11.09066e-4
MA0137.20.171
MA0138.20.00166
MA0139.10.401
MA0140.10.362
MA0141.10.131
MA0142.10.348
MA0143.10.0801
MA0144.10.88
MA0145.10.746
MA0146.10.0604
MA0147.10.508
MA0148.10.279
MA0149.10.41
MA0150.10.00375
MA0152.10.173
MA0153.10.0358
MA0154.10.00784
MA0155.10.593
MA0156.10.0832
MA0157.10.151
MA0159.10.677
MA0160.10.695
MA0162.10.352
MA0163.10.195
MA0164.10.265
MA0258.10.216
MA0259.10.895



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11256

Novel motifP-value
10.419
100.677
1000.43
1010.785
1020.796
1030.062
1040.61
1050.738
1060.0467
1070.183
1080.711
1090.451
110.0928
1100.811
1110.264
1120.219
1130.28
1140.0219
1150.999
1160.561
1170.412
1180.85
1190.429
120.343
1200.33
1210.366
1220.807
1230.193
1240.114
1250.573
1260.755
1270.369
1280.0127
1290.998
130.0715
1300.613
1310.313
1320.474
1330.00822
1340.334
1350.00902
1360.0255
1370.216
1380.0625
1390.0117
140.754
1400.735
1410.822
1420.995
1430.00352
1440.193
1450.48
1460.552
1470.884
1480.078
1490.144
150.25
1500.402
1510.297
1520.915
1530.111
1540.671
1550.182
1560.612
1570.93
1580.712
1590.133
160.593
1600.242
1610.418
1620.369
1630.607
1640.957
1650.567
1660.663
1670.653
1680.589
1690.966
170.72
180.032
190.142
20.608
200.349
210.903
220.724
230.0611
240.599
250.831
260.662
270.644
280.836
290.711
30.292
300.711
310.185
320.0182
330.256
340.402
350.0409
360.941
370.327
380.851
390.601
40.866
400.325
410.00856
420.553
430.159
440.948
450.81
460.107
470.938
480.946
490.0967
50.33
500.381
510.544
520.915
530.544
540.597
550.999
560.664
570.796
580.464
590.113
60.458
600.292
610.594
620.105
630.643
640.549
650.0558
660.221
670.35
680.129
690.47
70.579
700.264
710.522
720.826
730.983
740.0374
750.935
760.644
770.655
780.659
790.133
80.0874
800.0343
810.0748
820.00109
830.594
840.589
850.00516
860.403
870.508
880.716
890.0741
90.187
900.0593
910.24
920.16
930.409
940.257
950.826
960.151
970.65
980.0575
990.621



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11256


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
1000415 (epithelial cell of gall bladder)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002110 (gallbladder)
0002100 (trunk)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0005177 (trunk region element)
0005172 (abdomen element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0002294 (biliary system)
0001173 (biliary tree)
0000916 (abdomen)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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