FF:10663-109C6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005477 | ||
|accession_numbers=CAGE;DRX007965;DRR008837;DRZ000262;DRZ001647;DRZ011612;DRZ012997 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000479,UBERON:0002346,UBERON:0004121,UBERON:0000061,UBERON:0000465,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0001062,UBERON:0010316,UBERON:0005291,UBERON:0010317 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:171,DOID:3095,DOID:2994 | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:10663-109C6 | |fonse_cell_line=FF:10663-109C6 | ||
|fonse_cell_line_closure=FF:10663-109C6 | |fonse_cell_line_closure=FF:10663-109C6 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroectodermal%2520tumor%2520cell%2520line%253aFU-RPNT-2.CNhs11753.10663-109C6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroectodermal%2520tumor%2520cell%2520line%253aFU-RPNT-2.CNhs11753.10663-109C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroectodermal%2520tumor%2520cell%2520line%253aFU-RPNT-2.CNhs11753.10663-109C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroectodermal%2520tumor%2520cell%2520line%253aFU-RPNT-2.CNhs11753.10663-109C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroectodermal%2520tumor%2520cell%2520line%253aFU-RPNT-2.CNhs11753.10663-109C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10663-109C6 | |id=FF:10663-109C6 | ||
|is_a=DOID:171;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0002346 | |is_a=DOID:171;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0002346 | ||
|is_obsolete= | |||
|library_id=CNhs11753 | |||
|library_id_phase_based=2:CNhs11753 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10663 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10663 | |||
|name=neuroectodermal tumor cell line:FU-RPNT-2 | |name=neuroectodermal tumor cell line:FU-RPNT-2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11753,LSID820,release009,COMPLETED | |profile_hcage=CNhs11753,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=109 | |rna_box=109 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=93.84913 | |rna_weight_ug=93.84913 | ||
|sample_age=10 | |sample_age=10 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB2078 | |sample_cell_catalog=RCB2078 | ||
|sample_cell_line=FU-RPNT-2 | |sample_cell_line=FU-RPNT-2 | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=J | |sample_ethnicity=J | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.42328122190251e-291!GO:0043231;intracellular membrane-bound organelle;7.52729515591266e-263!GO:0043227;membrane-bound organelle;1.88105342540643e-262!GO:0043226;organelle;7.80507821402945e-254!GO:0043229;intracellular organelle;1.77423369405309e-253!GO:0005737;cytoplasm;7.3706688157857e-154!GO:0044422;organelle part;1.8835144490192e-151!GO:0044446;intracellular organelle part;3.42876599149918e-150!GO:0005634;nucleus;5.1648740435792e-144!GO:0043170;macromolecule metabolic process;6.57851020876185e-117!GO:0044238;primary metabolic process;1.29642576805229e-116!GO:0044237;cellular metabolic process;6.28117123322733e-116!GO:0044444;cytoplasmic part;6.61318551588339e-113!GO:0032991;macromolecular complex;2.5716714248181e-107!GO:0030529;ribonucleoprotein complex;4.3477834096538e-99!GO:0044428;nuclear part;2.56943896509302e-93!GO:0003723;RNA binding;6.18817204967535e-90!GO:0043233;organelle lumen;9.56866145994673e-88!GO:0031974;membrane-enclosed lumen;9.56866145994673e-88!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.61424385725159e-87!GO:0010467;gene expression;1.53533834283141e-86!GO:0043283;biopolymer metabolic process;7.11149424366898e-84!GO:0005515;protein binding;2.65802082116849e-68!GO:0003676;nucleic acid binding;5.42267326285031e-67!GO:0005739;mitochondrion;1.64030051159572e-64!GO:0006396;RNA processing;3.08268867732336e-60!GO:0005840;ribosome;1.79612781721535e-58!GO:0031981;nuclear lumen;1.08216317661582e-57!GO:0006412;translation;1.06034348907401e-52!GO:0016070;RNA metabolic process;1.29094191444617e-52!GO:0043234;protein complex;9.78344764444848e-52!GO:0016043;cellular component organization and biogenesis;1.22386646031645e-50!GO:0006259;DNA metabolic process;4.83249042019252e-50!GO:0003735;structural constituent of ribosome;1.56931386474086e-49!GO:0016071;mRNA metabolic process;1.68494155000086e-46!GO:0033279;ribosomal subunit;3.82050187087851e-43!GO:0008380;RNA splicing;1.00194362630394e-42!GO:0044429;mitochondrial part;1.00194362630394e-42!GO:0033036;macromolecule localization;7.14656478123347e-42!GO:0031090;organelle membrane;6.27444290118236e-41!GO:0006996;organelle organization and biogenesis;2.9142363181606e-40!GO:0019538;protein metabolic process;7.38536520334464e-40!GO:0015031;protein transport;9.89474914851895e-40!GO:0031967;organelle envelope;9.89474914851895e-40!GO:0031975;envelope;2.59907427377267e-39!GO:0006397;mRNA processing;2.93876949841498e-39!GO:0008104;protein localization;1.89813734278181e-37!GO:0065003;macromolecular complex assembly;2.24295306938432e-37!GO:0005654;nucleoplasm;5.10591780260793e-37!GO:0044249;cellular biosynthetic process;6.66710623529959e-37!GO:0045184;establishment of protein localization;3.50185684208664e-36!GO:0009059;macromolecule biosynthetic process;1.12658214913338e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.31306679360029e-35!GO:0044267;cellular protein metabolic process;6.41747049701748e-35!GO:0043228;non-membrane-bound organelle;1.79202614770805e-34!GO:0043232;intracellular non-membrane-bound organelle;1.79202614770805e-34!GO:0044260;cellular macromolecule metabolic process;2.1157188336518e-34!GO:0009058;biosynthetic process;1.7123142981205e-33!GO:0005829;cytosol;2.93808258934956e-33!GO:0022607;cellular component assembly;7.93437921364485e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.90466831503318e-32!GO:0046907;intracellular transport;1.39702328182333e-31!GO:0005681;spliceosome;6.5557185911086e-31!GO:0007049;cell cycle;1.56181499053115e-29!GO:0044451;nucleoplasm part;8.53032180811478e-29!GO:0006886;intracellular protein transport;3.2811813280134e-26!GO:0005740;mitochondrial envelope;4.81603850465479e-26!GO:0006974;response to DNA damage stimulus;1.17835204097749e-25!GO:0019866;organelle inner membrane;1.62629416506888e-25!GO:0031966;mitochondrial membrane;3.572308693096e-25!GO:0051276;chromosome organization and biogenesis;4.57152799632064e-25!GO:0044445;cytosolic part;6.8814397467461e-25!GO:0000166;nucleotide binding;1.29634114364088e-24!GO:0005694;chromosome;1.15078848568993e-23!GO:0005743;mitochondrial inner membrane;1.02816260566296e-22!GO:0015935;small ribosomal subunit;2.01847087381774e-22!GO:0006119;oxidative phosphorylation;2.53756431482998e-22!GO:0005730;nucleolus;3.17072580920732e-22!GO:0006281;DNA repair;3.56857248544821e-22!GO:0051649;establishment of cellular localization;4.07545251679634e-22!GO:0051641;cellular localization;7.57179502040023e-22!GO:0015934;large ribosomal subunit;7.95212201355803e-22!GO:0022402;cell cycle process;1.20344708985038e-21!GO:0006325;establishment and/or maintenance of chromatin architecture;2.63156735950327e-21!GO:0044455;mitochondrial membrane part;2.74871863036792e-21!GO:0044427;chromosomal part;6.20452036381256e-21!GO:0006323;DNA packaging;1.98419205111112e-20!GO:0022618;protein-RNA complex assembly;2.49105042284785e-20!GO:0031980;mitochondrial lumen;5.37651911518323e-20!GO:0005759;mitochondrial matrix;5.37651911518323e-20!GO:0019222;regulation of metabolic process;5.41883480655713e-20!GO:0000278;mitotic cell cycle;2.94150572091454e-19!GO:0016462;pyrophosphatase activity;3.06688848561526e-19!GO:0006260;DNA replication;3.11927384513373e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.92130325072172e-19!GO:0009719;response to endogenous stimulus;4.16421123821398e-19!GO:0006512;ubiquitin cycle;5.0829176658103e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;5.73862576938669e-19!GO:0008134;transcription factor binding;7.78964453784535e-19!GO:0050794;regulation of cellular process;1.27651178936868e-18!GO:0016874;ligase activity;1.50467978645547e-18!GO:0006457;protein folding;3.03428703877311e-18!GO:0006350;transcription;4.38790147722591e-18!GO:0017111;nucleoside-triphosphatase activity;5.97681518258197e-18!GO:0044265;cellular macromolecule catabolic process;2.36699658037064e-17!GO:0008135;translation factor activity, nucleic acid binding;2.46703556034239e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.73153202537237e-17!GO:0043285;biopolymer catabolic process;4.2704420061665e-17!GO:0005746;mitochondrial respiratory chain;4.80901379823838e-17!GO:0019941;modification-dependent protein catabolic process;5.56869879530515e-17!GO:0043632;modification-dependent macromolecule catabolic process;5.56869879530515e-17!GO:0006511;ubiquitin-dependent protein catabolic process;5.7616315215618e-17!GO:0044257;cellular protein catabolic process;9.37858695595832e-17!GO:0031323;regulation of cellular metabolic process;1.09590408782065e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.68730172916054e-16!GO:0042254;ribosome biogenesis and assembly;5.17789021506109e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.35600199318866e-16!GO:0048770;pigment granule;1.36282851598411e-15!GO:0042470;melanosome;1.36282851598411e-15!GO:0032553;ribonucleotide binding;1.53157709483776e-15!GO:0032555;purine ribonucleotide binding;1.53157709483776e-15!GO:0022403;cell cycle phase;1.58126795237032e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.62092196788188e-15!GO:0003954;NADH dehydrogenase activity;1.62092196788188e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.62092196788188e-15!GO:0006366;transcription from RNA polymerase II promoter;1.661629256104e-15!GO:0009057;macromolecule catabolic process;2.4610490940257e-15!GO:0012505;endomembrane system;2.73274909797892e-15!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.8726504260341e-15!GO:0032774;RNA biosynthetic process;3.28781957361034e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;3.39822199880812e-15!GO:0000375;RNA splicing, via transesterification reactions;3.39822199880812e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.39822199880812e-15!GO:0005761;mitochondrial ribosome;3.63267908204988e-15!GO:0000313;organellar ribosome;3.63267908204988e-15!GO:0017076;purine nucleotide binding;3.92407176785997e-15!GO:0010468;regulation of gene expression;3.94637316187432e-15!GO:0006351;transcription, DNA-dependent;4.77265478696419e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.28251190909365e-15!GO:0005524;ATP binding;1.05374456722105e-14!GO:0000087;M phase of mitotic cell cycle;1.21806306187392e-14!GO:0032559;adenyl ribonucleotide binding;1.37653709241141e-14!GO:0003677;DNA binding;1.63000489881348e-14!GO:0030163;protein catabolic process;2.34379420974096e-14!GO:0005635;nuclear envelope;2.62772291488755e-14!GO:0007067;mitosis;2.87692952202914e-14!GO:0030554;adenyl nucleotide binding;6.30710975021716e-14!GO:0050789;regulation of biological process;8.28529381244209e-14!GO:0031965;nuclear membrane;8.5539494953101e-14!GO:0042775;organelle ATP synthesis coupled electron transport;9.09769817806046e-14!GO:0042773;ATP synthesis coupled electron transport;9.09769817806046e-14!GO:0051082;unfolded protein binding;1.20670745084575e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.3211488777142e-13!GO:0045271;respiratory chain complex I;1.3211488777142e-13!GO:0005747;mitochondrial respiratory chain complex I;1.3211488777142e-13!GO:0006605;protein targeting;1.32912033758253e-13!GO:0006333;chromatin assembly or disassembly;1.41771914313434e-13!GO:0016887;ATPase activity;1.81422921011287e-13!GO:0042623;ATPase activity, coupled;2.17192455118116e-13!GO:0016604;nuclear body;2.30431368437397e-13!GO:0045449;regulation of transcription;3.04834150118066e-13!GO:0065004;protein-DNA complex assembly;4.2665178873862e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.2665178873862e-13!GO:0003743;translation initiation factor activity;5.01060089908212e-13!GO:0051301;cell division;5.29202789205504e-13!GO:0000502;proteasome complex (sensu Eukaryota);6.07529557631258e-13!GO:0004386;helicase activity;7.90293363878261e-13!GO:0006413;translational initiation;8.15599367957904e-13!GO:0016568;chromatin modification;8.61043310412918e-13!GO:0000785;chromatin;1.08009576024129e-12!GO:0003712;transcription cofactor activity;1.15442828381587e-12!GO:0000279;M phase;1.17170607915528e-12!GO:0006399;tRNA metabolic process;1.17934237552675e-12!GO:0044453;nuclear membrane part;1.33046756661567e-12!GO:0044248;cellular catabolic process;3.67728493415252e-12!GO:0000074;regulation of progression through cell cycle;3.78195439109434e-12!GO:0051726;regulation of cell cycle;3.93088733190177e-12!GO:0006355;regulation of transcription, DNA-dependent;6.80857840971628e-12!GO:0043566;structure-specific DNA binding;6.91779484476942e-12!GO:0048193;Golgi vesicle transport;6.91779484476942e-12!GO:0051186;cofactor metabolic process;7.26979032022122e-12!GO:0016607;nuclear speck;9.9529805514095e-12!GO:0006446;regulation of translational initiation;1.00784110135101e-11!GO:0006913;nucleocytoplasmic transport;1.30603704254028e-11!GO:0051169;nuclear transport;1.82196035088054e-11!GO:0043412;biopolymer modification;2.53318076322345e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.15644290096223e-11!GO:0008026;ATP-dependent helicase activity;4.51382996996125e-11!GO:0005643;nuclear pore;5.45229556362224e-11!GO:0006364;rRNA processing;7.09714654812785e-11!GO:0044432;endoplasmic reticulum part;8.17766952320675e-11!GO:0008565;protein transporter activity;9.41959946941781e-11!GO:0005794;Golgi apparatus;1.44264391736774e-10!GO:0016072;rRNA metabolic process;1.48781071537791e-10!GO:0050657;nucleic acid transport;1.5247635248123e-10!GO:0051236;establishment of RNA localization;1.5247635248123e-10!GO:0050658;RNA transport;1.5247635248123e-10!GO:0006403;RNA localization;1.92810347482447e-10!GO:0006732;coenzyme metabolic process;2.45486510014394e-10!GO:0005783;endoplasmic reticulum;2.57406736909892e-10!GO:0006261;DNA-dependent DNA replication;6.17445429227315e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.68788889668313e-10!GO:0003697;single-stranded DNA binding;9.97498479411661e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.04285861733913e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.04285861733913e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.04285861733913e-09!GO:0006334;nucleosome assembly;1.12376678963454e-09!GO:0015630;microtubule cytoskeleton;1.29998781069464e-09!GO:0031497;chromatin assembly;1.57158889195324e-09!GO:0009055;electron carrier activity;1.57158889195324e-09!GO:0005667;transcription factor complex;1.76181423258404e-09!GO:0006464;protein modification process;2.07169517550756e-09!GO:0030532;small nuclear ribonucleoprotein complex;2.45927837845555e-09!GO:0006461;protein complex assembly;4.09934646055567e-09!GO:0043038;amino acid activation;4.22442147257366e-09!GO:0006418;tRNA aminoacylation for protein translation;4.22442147257366e-09!GO:0043039;tRNA aminoacylation;4.22442147257366e-09!GO:0065002;intracellular protein transport across a membrane;4.76691880037058e-09!GO:0043687;post-translational protein modification;5.30209365952926e-09!GO:0017038;protein import;5.43324664080808e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.89131250672396e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.08199718016008e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.85526776572364e-09!GO:0016192;vesicle-mediated transport;9.7087513938805e-09!GO:0051028;mRNA transport;9.97284464023364e-09!GO:0046930;pore complex;9.97877444888622e-09!GO:0008639;small protein conjugating enzyme activity;1.03532829555511e-08!GO:0006163;purine nucleotide metabolic process;1.04979556863473e-08!GO:0016564;transcription repressor activity;1.08840982175866e-08!GO:0009259;ribonucleotide metabolic process;1.28857321280946e-08!GO:0012501;programmed cell death;1.43725541395905e-08!GO:0019787;small conjugating protein ligase activity;1.49390762793842e-08!GO:0004842;ubiquitin-protein ligase activity;1.59888855596202e-08!GO:0006915;apoptosis;2.80316271734051e-08!GO:0006164;purine nucleotide biosynthetic process;2.80316271734051e-08!GO:0009150;purine ribonucleotide metabolic process;3.32352863234722e-08!GO:0008219;cell death;3.84319835442362e-08!GO:0016265;death;3.84319835442362e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.93335733063376e-08!GO:0015986;ATP synthesis coupled proton transport;5.18589915283507e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.18589915283507e-08!GO:0051188;cofactor biosynthetic process;6.01800186270206e-08!GO:0009260;ribonucleotide biosynthetic process;8.61891890142739e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.70805159100618e-08!GO:0005768;endosome;1.34410810959903e-07!GO:0016881;acid-amino acid ligase activity;1.61914500627607e-07!GO:0016779;nucleotidyltransferase activity;1.80165109356144e-07!GO:0003714;transcription corepressor activity;2.17428433759086e-07!GO:0009141;nucleoside triphosphate metabolic process;2.40360686195448e-07!GO:0065007;biological regulation;2.45586349202259e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.74516323430061e-07!GO:0000245;spliceosome assembly;2.93660497179194e-07!GO:0032446;protein modification by small protein conjugation;2.94003913051997e-07!GO:0009199;ribonucleoside triphosphate metabolic process;3.11453329289139e-07!GO:0009142;nucleoside triphosphate biosynthetic process;3.33616771470635e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.33616771470635e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.84484806639068e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.85935742652929e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.85935742652929e-07!GO:0005793;ER-Golgi intermediate compartment;5.05572114159955e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.27172818352794e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.27172818352794e-07!GO:0019829;cation-transporting ATPase activity;5.32772801648891e-07!GO:0016567;protein ubiquitination;5.35750322796139e-07!GO:0009108;coenzyme biosynthetic process;5.60234201842777e-07!GO:0000151;ubiquitin ligase complex;5.68935623733851e-07!GO:0009060;aerobic respiration;5.81977343468068e-07!GO:0009056;catabolic process;6.95738669865205e-07!GO:0005789;endoplasmic reticulum membrane;6.95738669865205e-07!GO:0048523;negative regulation of cellular process;8.13771437025014e-07!GO:0006754;ATP biosynthetic process;1.02336631296748e-06!GO:0006753;nucleoside phosphate metabolic process;1.02336631296748e-06!GO:0007005;mitochondrion organization and biogenesis;1.14301874252886e-06!GO:0046034;ATP metabolic process;1.28166083588214e-06!GO:0051329;interphase of mitotic cell cycle;1.31626178432506e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.34738191875005e-06!GO:0043623;cellular protein complex assembly;1.38636098923572e-06!GO:0045333;cellular respiration;1.42288732882038e-06!GO:0045786;negative regulation of progression through cell cycle;1.55295066547599e-06!GO:0031324;negative regulation of cellular metabolic process;1.61858089785829e-06!GO:0045259;proton-transporting ATP synthase complex;1.62524878502335e-06!GO:0000775;chromosome, pericentric region;1.65786459552077e-06!GO:0031988;membrane-bound vesicle;1.65786459552077e-06!GO:0005819;spindle;1.67711865951767e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.79725778933973e-06!GO:0051246;regulation of protein metabolic process;1.84594460759969e-06!GO:0006752;group transfer coenzyme metabolic process;1.88703883220273e-06!GO:0005657;replication fork;1.88703883220273e-06!GO:0005788;endoplasmic reticulum lumen;1.90295098487781e-06!GO:0008094;DNA-dependent ATPase activity;1.99391407083932e-06!GO:0003690;double-stranded DNA binding;2.00960246249818e-06!GO:0003899;DNA-directed RNA polymerase activity;2.00960246249818e-06!GO:0009892;negative regulation of metabolic process;2.23501412214712e-06!GO:0016853;isomerase activity;2.46520800643421e-06!GO:0044440;endosomal part;2.90626977858759e-06!GO:0010008;endosome membrane;2.90626977858759e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.1154522030011e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.17253970420853e-06!GO:0009109;coenzyme catabolic process;3.45731194610502e-06!GO:0003682;chromatin binding;4.06634517079086e-06!GO:0006606;protein import into nucleus;4.26554694231956e-06!GO:0051170;nuclear import;4.28143668397918e-06!GO:0005813;centrosome;4.53824045645295e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.86973656417049e-06!GO:0006099;tricarboxylic acid cycle;6.11413070262575e-06!GO:0046356;acetyl-CoA catabolic process;6.11413070262575e-06!GO:0031982;vesicle;6.64081193019951e-06!GO:0016563;transcription activator activity;6.99234348108092e-06!GO:0015078;hydrogen ion transmembrane transporter activity;7.35619043047567e-06!GO:0003724;RNA helicase activity;7.77389867143309e-06!GO:0031410;cytoplasmic vesicle;7.97123889866256e-06!GO:0006888;ER to Golgi vesicle-mediated transport;8.15715535277898e-06!GO:0005815;microtubule organizing center;9.39145813886283e-06!GO:0048519;negative regulation of biological process;1.11650247174761e-05!GO:0048475;coated membrane;1.38059680279514e-05!GO:0030117;membrane coat;1.38059680279514e-05!GO:0016481;negative regulation of transcription;1.45626605314282e-05!GO:0007051;spindle organization and biogenesis;1.4710959541031e-05!GO:0005770;late endosome;1.48991366770345e-05!GO:0051325;interphase;1.5826765164528e-05!GO:0015631;tubulin binding;1.60980607824835e-05!GO:0005762;mitochondrial large ribosomal subunit;1.60980607824835e-05!GO:0000315;organellar large ribosomal subunit;1.60980607824835e-05!GO:0003729;mRNA binding;1.71722227756524e-05!GO:0006613;cotranslational protein targeting to membrane;1.74026486795042e-05!GO:0051187;cofactor catabolic process;1.92262801855222e-05!GO:0051168;nuclear export;1.92262801855222e-05!GO:0006084;acetyl-CoA metabolic process;1.98659937501551e-05!GO:0016740;transferase activity;2.03068079516683e-05!GO:0000314;organellar small ribosomal subunit;2.03068079516683e-05!GO:0005763;mitochondrial small ribosomal subunit;2.03068079516683e-05!GO:0003713;transcription coactivator activity;2.57201205576218e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.08035475768794e-05!GO:0003684;damaged DNA binding;3.28894580817909e-05!GO:0016363;nuclear matrix;3.34973891733143e-05!GO:0008168;methyltransferase activity;3.65989733593422e-05!GO:0030120;vesicle coat;3.772734259989e-05!GO:0030662;coated vesicle membrane;3.772734259989e-05!GO:0006302;double-strand break repair;4.36444733700842e-05!GO:0008033;tRNA processing;4.51691386489868e-05!GO:0009117;nucleotide metabolic process;4.76104607131034e-05!GO:0051427;hormone receptor binding;5.92958704790939e-05!GO:0005798;Golgi-associated vesicle;6.93162560271353e-05!GO:0000786;nucleosome;7.02217321353544e-05!GO:0004527;exonuclease activity;7.60285458044052e-05!GO:0000776;kinetochore;7.87337428811813e-05!GO:0006793;phosphorus metabolic process;7.99377028969322e-05!GO:0006796;phosphate metabolic process;7.99377028969322e-05!GO:0007017;microtubule-based process;7.99377028969322e-05!GO:0005874;microtubule;8.2687894070619e-05!GO:0044431;Golgi apparatus part;8.82066265767982e-05!GO:0000075;cell cycle checkpoint;8.82888733112195e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;9.20889701366046e-05!GO:0003678;DNA helicase activity;9.59483279080042e-05!GO:0016310;phosphorylation;0.000103220569854274!GO:0005769;early endosome;0.000104849653914044!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000108494072688146!GO:0051052;regulation of DNA metabolic process;0.000114003337253014!GO:0035257;nuclear hormone receptor binding;0.000117065931912657!GO:0006414;translational elongation;0.000119642608576473!GO:0006338;chromatin remodeling;0.000120838098491294!GO:0006310;DNA recombination;0.000124327609207038!GO:0005839;proteasome core complex (sensu Eukaryota);0.000125884365737781!GO:0008654;phospholipid biosynthetic process;0.000136701041863476!GO:0006402;mRNA catabolic process;0.000146210627656851!GO:0006916;anti-apoptosis;0.000163935129338665!GO:0043069;negative regulation of programmed cell death;0.000171062408819875!GO:0006401;RNA catabolic process;0.000173530741587963!GO:0019843;rRNA binding;0.000182865687027544!GO:0043021;ribonucleoprotein binding;0.000191533700559262!GO:0019899;enzyme binding;0.000196466120183468!GO:0008186;RNA-dependent ATPase activity;0.000198748925364885!GO:0043066;negative regulation of apoptosis;0.000215991182135982!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000215991182135982!GO:0043681;protein import into mitochondrion;0.000245374348053657!GO:0006383;transcription from RNA polymerase III promoter;0.000282786574866604!GO:0006352;transcription initiation;0.000294594003737091!GO:0006626;protein targeting to mitochondrion;0.000311323045412576!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00032705340866167!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000327458245118403!GO:0048471;perinuclear region of cytoplasm;0.000351100706639817!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000367702800066124!GO:0004576;oligosaccharyl transferase activity;0.000367776174562554!GO:0004298;threonine endopeptidase activity;0.000375746053801207!GO:0016859;cis-trans isomerase activity;0.000387202865040545!GO:0044452;nucleolar part;0.000388523886722405!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000396469826268875!GO:0003746;translation elongation factor activity;0.000413239246741305!GO:0032508;DNA duplex unwinding;0.000433221711445536!GO:0032392;DNA geometric change;0.000433221711445536!GO:0008250;oligosaccharyl transferase complex;0.000460864203632423!GO:0004518;nuclease activity;0.000464763024151318!GO:0051789;response to protein stimulus;0.000485042590071264!GO:0006986;response to unfolded protein;0.000485042590071264!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000537259370204064!GO:0007006;mitochondrial membrane organization and biogenesis;0.000542778113192857!GO:0045454;cell redox homeostasis;0.000556557782661935!GO:0003702;RNA polymerase II transcription factor activity;0.000562394341220862!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000564401126631815!GO:0004004;ATP-dependent RNA helicase activity;0.000617261877930547!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00062956011798523!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00062956011798523!GO:0006612;protein targeting to membrane;0.000694252912324735!GO:0000049;tRNA binding;0.000705361241502433!GO:0006405;RNA export from nucleus;0.00071540787470379!GO:0003924;GTPase activity;0.000776249946878238!GO:0042981;regulation of apoptosis;0.000781331079027951!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000872771375733692!GO:0043067;regulation of programmed cell death;0.000927639139235431!GO:0000059;protein import into nucleus, docking;0.000928881348802563!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000932724083643971!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000932724083643971!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000932724083643971!GO:0033116;ER-Golgi intermediate compartment membrane;0.000951856794099913!GO:0007088;regulation of mitosis;0.000977287991520439!GO:0006268;DNA unwinding during replication;0.0010176406168985!GO:0006839;mitochondrial transport;0.00102394035591824!GO:0005684;U2-dependent spliceosome;0.00102651684023433!GO:0008270;zinc ion binding;0.00108782024121106!GO:0008017;microtubule binding;0.00114173280767864!GO:0032200;telomere organization and biogenesis;0.0011484411557232!GO:0000723;telomere maintenance;0.0011484411557232!GO:0006284;base-excision repair;0.00115352437939536!GO:0051920;peroxiredoxin activity;0.00133182960622596!GO:0005637;nuclear inner membrane;0.00141456191967847!GO:0007052;mitotic spindle organization and biogenesis;0.00149745619619858!GO:0030867;rough endoplasmic reticulum membrane;0.00160397285133973!GO:0045045;secretory pathway;0.00161960850794225!GO:0005048;signal sequence binding;0.00162995693276228!GO:0045893;positive regulation of transcription, DNA-dependent;0.0017599784190139!GO:0000139;Golgi membrane;0.00184687398443867!GO:0006289;nucleotide-excision repair;0.00196663434779049!GO:0005773;vacuole;0.00210639265442926!GO:0016251;general RNA polymerase II transcription factor activity;0.00227867657154045!GO:0031072;heat shock protein binding;0.00229102357844063!GO:0005741;mitochondrial outer membrane;0.00229265226841106!GO:0031124;mRNA 3'-end processing;0.00235086464581299!GO:0005791;rough endoplasmic reticulum;0.00236456485997344!GO:0009165;nucleotide biosynthetic process;0.00236663862961753!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00244375385587392!GO:0046489;phosphoinositide biosynthetic process;0.0024944650411991!GO:0031968;organelle outer membrane;0.00258815597179393!GO:0045892;negative regulation of transcription, DNA-dependent;0.00267686800916981!GO:0007093;mitotic cell cycle checkpoint;0.00274108996387198!GO:0051087;chaperone binding;0.00280406572040045!GO:0045941;positive regulation of transcription;0.00304609224579266!GO:0000792;heterochromatin;0.00304689601440769!GO:0048500;signal recognition particle;0.00305861150028959!GO:0005876;spindle microtubule;0.00308067203663189!GO:0019867;outer membrane;0.00308067203663189!GO:0005905;coated pit;0.00314339546811135!GO:0046474;glycerophospholipid biosynthetic process;0.00315210957132775!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00315711811402407!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00315711811402407!GO:0007050;cell cycle arrest;0.00343070636030248!GO:0040029;regulation of gene expression, epigenetic;0.00344037531399667!GO:0003711;transcription elongation regulator activity;0.00344248474697742!GO:0000082;G1/S transition of mitotic cell cycle;0.00353741834929841!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00355732978048555!GO:0048487;beta-tubulin binding;0.00361904689545243!GO:0018196;peptidyl-asparagine modification;0.00367424208034944!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00367424208034944!GO:0031902;late endosome membrane;0.0036766374554497!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0036766374554497!GO:0015399;primary active transmembrane transporter activity;0.0036766374554497!GO:0015980;energy derivation by oxidation of organic compounds;0.00370356884295962!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0037447927060504!GO:0006275;regulation of DNA replication;0.0037624848800901!GO:0030133;transport vesicle;0.00378561383985728!GO:0030880;RNA polymerase complex;0.00381842066703291!GO:0016787;hydrolase activity;0.00386406270066725!GO:0005525;GTP binding;0.0039710097062324!GO:0008312;7S RNA binding;0.00409856385356365!GO:0000178;exosome (RNase complex);0.00427053571303395!GO:0007059;chromosome segregation;0.00447013406259387!GO:0046966;thyroid hormone receptor binding;0.00447013406259387!GO:0000781;chromosome, telomeric region;0.00466335945942112!GO:0006091;generation of precursor metabolites and energy;0.00466703473937558!GO:0008180;signalosome;0.00588680437828313!GO:0051252;regulation of RNA metabolic process;0.00618128831204274!GO:0048468;cell development;0.00618128831204274!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00618128831204274!GO:0007010;cytoskeleton organization and biogenesis;0.00638043518393432!GO:0000323;lytic vacuole;0.00665855291550008!GO:0005764;lysosome;0.00665855291550008!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00680993797510325!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00684085179231175!GO:0045047;protein targeting to ER;0.00684085179231175!GO:0000339;RNA cap binding;0.00708176595750997!GO:0005869;dynactin complex;0.00727201011061111!GO:0043596;nuclear replication fork;0.00727201011061111!GO:0030663;COPI coated vesicle membrane;0.00727201011061111!GO:0030126;COPI vesicle coat;0.00727201011061111!GO:0000228;nuclear chromosome;0.00727201011061111!GO:0005885;Arp2/3 protein complex;0.00731316506722419!GO:0006891;intra-Golgi vesicle-mediated transport;0.00747320625414597!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00758491823357093!GO:0000428;DNA-directed RNA polymerase complex;0.00758491823357093!GO:0046914;transition metal ion binding;0.00778192745500542!GO:0043414;biopolymer methylation;0.00778205717298776!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00806771346585897!GO:0008139;nuclear localization sequence binding;0.00836581405028695!GO:0008022;protein C-terminus binding;0.00852402006632248!GO:0007004;telomere maintenance via telomerase;0.00924315917545054!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00944776279857038!GO:0006378;mRNA polyadenylation;0.00967867841832503!GO:0004003;ATP-dependent DNA helicase activity;0.00970474751046588!GO:0030518;steroid hormone receptor signaling pathway;0.00971778711641963!GO:0006270;DNA replication initiation;0.0101810320602237!GO:0016584;nucleosome positioning;0.0102389297155365!GO:0005832;chaperonin-containing T-complex;0.01025557668042!GO:0043284;biopolymer biosynthetic process;0.0102583751027338!GO:0019783;small conjugating protein-specific protease activity;0.0103588367145602!GO:0046467;membrane lipid biosynthetic process;0.0103958881153863!GO:0000922;spindle pole;0.0107764332998253!GO:0032259;methylation;0.0109209033298421!GO:0006818;hydrogen transport;0.0109987877517306!GO:0043488;regulation of mRNA stability;0.0110973866723149!GO:0043487;regulation of RNA stability;0.0110973866723149!GO:0051128;regulation of cellular component organization and biogenesis;0.0112258872767305!GO:0008276;protein methyltransferase activity;0.0113146219148141!GO:0016272;prefoldin complex;0.0113260045619168!GO:0031123;RNA 3'-end processing;0.0113465340848564!GO:0051540;metal cluster binding;0.0114603748116213!GO:0051536;iron-sulfur cluster binding;0.0114603748116213!GO:0006611;protein export from nucleus;0.0115351593620226!GO:0016585;chromatin remodeling complex;0.0115832914324533!GO:0006376;mRNA splice site selection;0.0118511973590874!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0118511973590874!GO:0030521;androgen receptor signaling pathway;0.0118545362271356!GO:0008408;3'-5' exonuclease activity;0.0120400611575412!GO:0004843;ubiquitin-specific protease activity;0.0123270938734054!GO:0043022;ribosome binding;0.0127906745920427!GO:0000084;S phase of mitotic cell cycle;0.012846365311451!GO:0030384;phosphoinositide metabolic process;0.0130585513812824!GO:0004532;exoribonuclease activity;0.0134027006429653!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0134027006429653!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0136044793091779!GO:0015002;heme-copper terminal oxidase activity;0.0136044793091779!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0136044793091779!GO:0004129;cytochrome-c oxidase activity;0.0136044793091779!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0138746664852578!GO:0006595;polyamine metabolic process;0.0139934598776221!GO:0030137;COPI-coated vesicle;0.0143389555822181!GO:0006505;GPI anchor metabolic process;0.0144211445083419!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0146672961253655!GO:0006892;post-Golgi vesicle-mediated transport;0.0151903592461089!GO:0051539;4 iron, 4 sulfur cluster binding;0.0153224247385692!GO:0030118;clathrin coat;0.01539350792565!GO:0035258;steroid hormone receptor binding;0.0154718050294824!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0154805393308956!GO:0031252;leading edge;0.0156098883855093!GO:0000910;cytokinesis;0.0156141453594612!GO:0015992;proton transport;0.0156514336436805!GO:0000725;recombinational repair;0.0157337918769891!GO:0000724;double-strand break repair via homologous recombination;0.0157337918769891!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0157596263281053!GO:0006733;oxidoreduction coenzyme metabolic process;0.0159192980679396!GO:0042802;identical protein binding;0.0164454026093745!GO:0006506;GPI anchor biosynthetic process;0.0167722632508126!GO:0051101;regulation of DNA binding;0.0167992539107705!GO:0005669;transcription factor TFIID complex;0.0171919047575955!GO:0004221;ubiquitin thiolesterase activity;0.0176651262752547!GO:0031901;early endosome membrane;0.0178524836594053!GO:0000118;histone deacetylase complex;0.0180006644675313!GO:0016407;acetyltransferase activity;0.0180264090676563!GO:0007021;tubulin folding;0.0186975733920844!GO:0006730;one-carbon compound metabolic process;0.0188936374183533!GO:0047485;protein N-terminus binding;0.0193768168988718!GO:0006650;glycerophospholipid metabolic process;0.0194720793441043!GO:0042393;histone binding;0.0194720793441043!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0201127994481043!GO:0006278;RNA-dependent DNA replication;0.0202590794980648!GO:0006144;purine base metabolic process;0.0203930662308166!GO:0006509;membrane protein ectodomain proteolysis;0.0204814134838013!GO:0033619;membrane protein proteolysis;0.0204814134838013!GO:0006984;ER-nuclear signaling pathway;0.020653838521818!GO:0032561;guanyl ribonucleotide binding;0.0207939289616463!GO:0019001;guanyl nucleotide binding;0.0207939289616463!GO:0042158;lipoprotein biosynthetic process;0.0220049695326892!GO:0008097;5S rRNA binding;0.0223140095957369!GO:0000152;nuclear ubiquitin ligase complex;0.0225852725307049!GO:0016491;oxidoreductase activity;0.0229755613708311!GO:0044454;nuclear chromosome part;0.0230693839313576!GO:0031529;ruffle organization and biogenesis;0.0231165867701767!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0234387212225753!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0236469155502323!GO:0030522;intracellular receptor-mediated signaling pathway;0.0242070324851969!GO:0007346;regulation of progression through mitotic cell cycle;0.0242070324851969!GO:0006400;tRNA modification;0.0251696070149193!GO:0030134;ER to Golgi transport vesicle;0.025905104725485!GO:0009451;RNA modification;0.026116248059956!GO:0030132;clathrin coat of coated pit;0.0265384065454246!GO:0000123;histone acetyltransferase complex;0.0268038476964784!GO:0046128;purine ribonucleoside metabolic process;0.0268038476964784!GO:0042278;purine nucleoside metabolic process;0.0268038476964784!GO:0031625;ubiquitin protein ligase binding;0.0272083167972358!GO:0005680;anaphase-promoting complex;0.02731927034957!GO:0006497;protein amino acid lipidation;0.0279555713294519!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0280459172727292!GO:0031970;organelle envelope lumen;0.0281482669296401!GO:0030041;actin filament polymerization;0.0282183505948577!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0283825418876599!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0284691514993295!GO:0043624;cellular protein complex disassembly;0.0289702862525113!GO:0009303;rRNA transcription;0.0291631040168397!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0294502803184362!GO:0043601;nuclear replisome;0.0296689380653352!GO:0030894;replisome;0.0296689380653352!GO:0005663;DNA replication factor C complex;0.0299983809529359!GO:0043492;ATPase activity, coupled to movement of substances;0.0300014787790668!GO:0031371;ubiquitin conjugating enzyme complex;0.0300104133851089!GO:0007090;regulation of S phase of mitotic cell cycle;0.0301387270581326!GO:0051320;S phase;0.0302763390345968!GO:0000096;sulfur amino acid metabolic process;0.0315550994559656!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0318019058682682!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0318019058682682!GO:0065009;regulation of a molecular function;0.0325173466940206!GO:0000790;nuclear chromatin;0.0325719046233459!GO:0008320;protein transmembrane transporter activity;0.0326795332237314!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0327945910816086!GO:0043189;H4/H2A histone acetyltransferase complex;0.0333361659988739!GO:0022411;cellular component disassembly;0.0335852117902782!GO:0030176;integral to endoplasmic reticulum membrane;0.0335852117902782!GO:0051098;regulation of binding;0.0335852117902782!GO:0045947;negative regulation of translational initiation;0.0338570914938245!GO:0009112;nucleobase metabolic process;0.0340828489010644!GO:0050811;GABA receptor binding;0.0347909597196402!GO:0006406;mRNA export from nucleus;0.0348909703575874!GO:0033559;unsaturated fatty acid metabolic process;0.0351260131090902!GO:0006636;unsaturated fatty acid biosynthetic process;0.0351260131090902!GO:0004674;protein serine/threonine kinase activity;0.0351633220866741!GO:0005784;translocon complex;0.0359947158567837!GO:0044450;microtubule organizing center part;0.036307766758609!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0364838871951655!GO:0035267;NuA4 histone acetyltransferase complex;0.0367786215360092!GO:0000209;protein polyubiquitination;0.0370101761032816!GO:0003725;double-stranded RNA binding;0.0370101761032816!GO:0016790;thiolester hydrolase activity;0.037144473535115!GO:0008632;apoptotic program;0.0371646186463712!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0371646186463712!GO:0046483;heterocycle metabolic process;0.037429718866977!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0377467486176661!GO:0045926;negative regulation of growth;0.0377945516865702!GO:0017134;fibroblast growth factor binding;0.0378237508305209!GO:0032984;macromolecular complex disassembly;0.0382781728824608!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0388054272620558!GO:0016197;endosome transport;0.0388054272620558!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0389019910538069!GO:0045039;protein import into mitochondrial inner membrane;0.0389019910538069!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0389539304505324!GO:0050178;phenylpyruvate tautomerase activity;0.0391334055195889!GO:0006354;RNA elongation;0.0392499388149229!GO:0030911;TPR domain binding;0.0396358116914326!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0396521673576884!GO:0051287;NAD binding;0.0401117553563589!GO:0016579;protein deubiquitination;0.0401117553563589!GO:0005652;nuclear lamina;0.0408751958722207!GO:0005844;polysome;0.0411523878884599!GO:0032940;secretion by cell;0.0420046018412393!GO:0005521;lamin binding;0.0421605476202874!GO:0022884;macromolecule transmembrane transporter activity;0.0421605476202874!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0421605476202874!GO:0030262;apoptotic nuclear changes;0.0421605476202874!GO:0030658;transport vesicle membrane;0.042808956771825!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0430196489825624!GO:0031369;translation initiation factor binding;0.0430419403652773!GO:0030135;coated vesicle;0.0436905092154694!GO:0003756;protein disulfide isomerase activity;0.044132794425113!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.044132794425113!GO:0030127;COPII vesicle coat;0.04457752534236!GO:0012507;ER to Golgi transport vesicle membrane;0.04457752534236!GO:0006007;glucose catabolic process;0.04457752534236!GO:0042770;DNA damage response, signal transduction;0.0453075046166977!GO:0030508;thiol-disulfide exchange intermediate activity;0.0464411793419567!GO:0000726;non-recombinational repair;0.0473060150747891!GO:0030119;AP-type membrane coat adaptor complex;0.0475023192493368!GO:0032507;maintenance of cellular protein localization;0.0476873765895842!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0476873765895842!GO:0010257;NADH dehydrogenase complex assembly;0.0476873765895842!GO:0033108;mitochondrial respiratory chain complex assembly;0.0476873765895842!GO:0003887;DNA-directed DNA polymerase activity;0.0476873765895842!GO:0003923;GPI-anchor transamidase activity;0.0476873765895842!GO:0016255;attachment of GPI anchor to protein;0.0476873765895842!GO:0042765;GPI-anchor transamidase complex;0.0476873765895842!GO:0031570;DNA integrity checkpoint;0.0479306904455098!GO:0045792;negative regulation of cell size;0.0493385418399402!GO:0009116;nucleoside metabolic process;0.0496622632595576!GO:0016860;intramolecular oxidoreductase activity;0.0497471453611388 | |||
|sample_id=10663 | |sample_id=10663 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=kidney | |sample_tissue=kidney | ||
|top_motifs=TOPORS:4.28708651435;PITX1..3:4.10554169973;FOXP1:3.91252758068;PAX4:3.23293686208;ALX1:3.1595784344;AIRE:2.62620344742;ZBTB16:2.19014776549;CDX1,2,4:2.16851063033;POU1F1:1.94991437435;FOXD3:1.89284913102;POU3F1..4:1.428417362;PRRX1,2:1.42047896505;ARID5B:1.33040395342;STAT5{A,B}:1.31122686624;PBX1:1.25236894232;HOXA9_MEIS1:1.23113285029;POU2F1..3:1.21162951698;GATA4:1.20587732193;LHX3,4:1.20283262918;DBP:1.16755421189;IKZF2:1.16704663582;OCT4_SOX2{dimer}:1.11224612899;E2F1..5:1.0650869204;FOXL1:1.01831699331;POU6F1:1.00962970603;FOXM1:0.971881575305;BREu{core}:0.960543990279;ZNF143:0.955909660247;NRF1:0.946100071114;GTF2A1,2:0.930954265512;YY1:0.904225701666;bHLH_family:0.897914121777;ATF4:0.890923878997;NKX6-1,2:0.890860062408;EGR1..3:0.872868333643;SOX{8,9,10}:0.853675659394;ATF5_CREB3:0.852442499938;T:0.851483528515;POU5F1:0.825488574021;PAX3,7:0.811157796855;PRDM1:0.795247588841;GFI1:0.785442502873;CUX2:0.77357141769;HOX{A5,B5}:0.760659508098;NKX3-1:0.735040933985;FOXQ1:0.717722318239;CRX:0.716776185181;ZIC1..3:0.698685143751;DMAP1_NCOR{1,2}_SMARC:0.693401947675;RFX1:0.670149405162;ZNF384:0.670001672158;HOX{A6,A7,B6,B7}:0.63667189593;NR6A1:0.629760274873;TFDP1:0.623509608485;UFEwm:0.615994744082;NFY{A,B,C}:0.597211138322;ELK1,4_GABP{A,B1}:0.587349329435;FOX{D1,D2}:0.572214406963;REST:0.542239948355;ZNF423:0.500574739434;ATF6:0.493738031145;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.472762251233;RFX2..5_RFXANK_RFXAP:0.429937272715;TEF:0.390683020294;GTF2I:0.357866835346;ZBTB6:0.331585075629;AHR_ARNT_ARNT2:0.312381854086;BPTF:0.301882050731;MZF1:0.290373376251;MTE{core}:0.277854104316;PATZ1:0.273671804639;SOX17:0.270798527285;FOXN1:0.265548819956;SOX5:0.26005895125;STAT1,3:0.246028537711;TLX1..3_NFIC{dimer}:0.240760450747;KLF4:0.221798165056;RORA:0.213068201388;HMGA1,2:0.205016104808;RBPJ:0.196383991467;HOX{A4,D4}:0.180366591597;EVI1:0.165008486029;RXR{A,B,G}:0.153083958166;ONECUT1,2:0.150618907396;MYB:0.106491564503;ZFP161:0.101115851218;FOXP3:0.080929302599;CDC5L:0.0682928076445;PAX1,9:0.0583801119655;PAX8:0.0321502442075;CREB1:0.0149642468047;NHLH1,2:0.0100354468635;PDX1:-0.00413069588585;SREBF1,2:-0.0188535150433;MED-1{core}:-0.023628653039;NFE2L1:-0.0658157046;TBP:-0.0912980753635;NKX2-1,4:-0.107530122676;PAX2:-0.115140036721;ATF2:-0.131572777871;MEF2{A,B,C,D}:-0.143284832999;RREB1:-0.169131804949;PAX5:-0.192809140033;EN1,2:-0.209430633413;GZF1:-0.224965481141;MAZ:-0.225984888685;FOX{I1,J2}:-0.226935990638;ADNP_IRX_SIX_ZHX:-0.233425172143;NKX2-2,8:-0.233911207316;NKX2-3_NKX2-5:-0.23403881967;SP1:-0.253363249001;TFAP2B:-0.280800340622;JUN:-0.284123812175;XBP1:-0.293920412606;NFIX:-0.319269583175;GFI1B:-0.348614215783;SPIB:-0.352536260487;CEBPA,B_DDIT3:-0.360153184307;ALX4:-0.361933693215;XCPE1{core}:-0.380446765549;HNF1A:-0.383787664034;NANOG:-0.385364542078;PAX6:-0.388994760632;GATA6:-0.416749624415;MYFfamily:-0.450917473887;FOXO1,3,4:-0.460556071515;NFIL3:-0.473031795392;NKX3-2:-0.474217119734;NFE2L2:-0.493799066673;RUNX1..3:-0.494301318914;TLX2:-0.500540499191;MTF1:-0.504903551592;NFKB1_REL_RELA:-0.50795941823;TAL1_TCF{3,4,12}:-0.521848785092;FOXA2:-0.534888329017;EBF1:-0.57131422961;TEAD1:-0.574172381404;HIC1:-0.59468816737;IRF1,2:-0.599600122574;HES1:-0.642005863741;ZNF238:-0.642722935946;HNF4A_NR2F1,2:-0.644864579266;SPI1:-0.673847509637;EP300:-0.676519292458;IRF7:-0.676531315097;SRF:-0.696501713941;MAFB:-0.713793839853;TFAP2{A,C}:-0.716136612568;SOX2:-0.717274366863;LMO2:-0.729108902667;NFE2:-0.73143370006;STAT2,4,6:-0.735011912376;TP53:-0.741984286029;AR:-0.75444688592;ELF1,2,4:-0.759466970008;FOS_FOS{B,L1}_JUN{B,D}:-0.766082922391;NANOG{mouse}:-0.773836554888;SNAI1..3:-0.778560796942;HLF:-0.785275154744;ZEB1:-0.81109435967;HBP1_HMGB_SSRP1_UBTF:-0.818093358351;HMX1:-0.85295447092;FOSL2:-0.880942142748;MYOD1:-0.897924152322;SPZ1:-0.902574261879;MYBL2:-0.91407707129;BACH2:-0.927860891287;ETS1,2:-0.931669344735;NR1H4:-0.977957660531;TBX4,5:-0.992779540648;LEF1_TCF7_TCF7L1,2:-1.06206063657;TGIF1:-1.10292293193;HSF1,2:-1.12863038597;GLI1..3:-1.15118102103;ESRRA:-1.19844932787;GCM1,2:-1.20292859407;HIF1A:-1.21133811494;SMAD1..7,9:-1.23029076256;NR3C1:-1.23417167821;HAND1,2:-1.28989515865;PPARG:-1.30946425009;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.36292223969;NR5A1,2:-1.39442946492;IKZF1:-1.45382574991;NFATC1..3:-1.48337395688;FOX{F1,F2,J1}:-1.49365836515;VSX1,2:-1.56133730371;RXRA_VDR{dimer}:-1.63774155407;TFAP4:-1.63869669236;ZNF148:-1.9270647122;TFCP2:-1.93321115773;ESR1:-2.07261836761 | |top_motifs=TOPORS:4.28708651435;PITX1..3:4.10554169973;FOXP1:3.91252758068;PAX4:3.23293686208;ALX1:3.1595784344;AIRE:2.62620344742;ZBTB16:2.19014776549;CDX1,2,4:2.16851063033;POU1F1:1.94991437435;FOXD3:1.89284913102;POU3F1..4:1.428417362;PRRX1,2:1.42047896505;ARID5B:1.33040395342;STAT5{A,B}:1.31122686624;PBX1:1.25236894232;HOXA9_MEIS1:1.23113285029;POU2F1..3:1.21162951698;GATA4:1.20587732193;LHX3,4:1.20283262918;DBP:1.16755421189;IKZF2:1.16704663582;OCT4_SOX2{dimer}:1.11224612899;E2F1..5:1.0650869204;FOXL1:1.01831699331;POU6F1:1.00962970603;FOXM1:0.971881575305;BREu{core}:0.960543990279;ZNF143:0.955909660247;NRF1:0.946100071114;GTF2A1,2:0.930954265512;YY1:0.904225701666;bHLH_family:0.897914121777;ATF4:0.890923878997;NKX6-1,2:0.890860062408;EGR1..3:0.872868333643;SOX{8,9,10}:0.853675659394;ATF5_CREB3:0.852442499938;T:0.851483528515;POU5F1:0.825488574021;PAX3,7:0.811157796855;PRDM1:0.795247588841;GFI1:0.785442502873;CUX2:0.77357141769;HOX{A5,B5}:0.760659508098;NKX3-1:0.735040933985;FOXQ1:0.717722318239;CRX:0.716776185181;ZIC1..3:0.698685143751;DMAP1_NCOR{1,2}_SMARC:0.693401947675;RFX1:0.670149405162;ZNF384:0.670001672158;HOX{A6,A7,B6,B7}:0.63667189593;NR6A1:0.629760274873;TFDP1:0.623509608485;UFEwm:0.615994744082;NFY{A,B,C}:0.597211138322;ELK1,4_GABP{A,B1}:0.587349329435;FOX{D1,D2}:0.572214406963;REST:0.542239948355;ZNF423:0.500574739434;ATF6:0.493738031145;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.472762251233;RFX2..5_RFXANK_RFXAP:0.429937272715;TEF:0.390683020294;GTF2I:0.357866835346;ZBTB6:0.331585075629;AHR_ARNT_ARNT2:0.312381854086;BPTF:0.301882050731;MZF1:0.290373376251;MTE{core}:0.277854104316;PATZ1:0.273671804639;SOX17:0.270798527285;FOXN1:0.265548819956;SOX5:0.26005895125;STAT1,3:0.246028537711;TLX1..3_NFIC{dimer}:0.240760450747;KLF4:0.221798165056;RORA:0.213068201388;HMGA1,2:0.205016104808;RBPJ:0.196383991467;HOX{A4,D4}:0.180366591597;EVI1:0.165008486029;RXR{A,B,G}:0.153083958166;ONECUT1,2:0.150618907396;MYB:0.106491564503;ZFP161:0.101115851218;FOXP3:0.080929302599;CDC5L:0.0682928076445;PAX1,9:0.0583801119655;PAX8:0.0321502442075;CREB1:0.0149642468047;NHLH1,2:0.0100354468635;PDX1:-0.00413069588585;SREBF1,2:-0.0188535150433;MED-1{core}:-0.023628653039;NFE2L1:-0.0658157046;TBP:-0.0912980753635;NKX2-1,4:-0.107530122676;PAX2:-0.115140036721;ATF2:-0.131572777871;MEF2{A,B,C,D}:-0.143284832999;RREB1:-0.169131804949;PAX5:-0.192809140033;EN1,2:-0.209430633413;GZF1:-0.224965481141;MAZ:-0.225984888685;FOX{I1,J2}:-0.226935990638;ADNP_IRX_SIX_ZHX:-0.233425172143;NKX2-2,8:-0.233911207316;NKX2-3_NKX2-5:-0.23403881967;SP1:-0.253363249001;TFAP2B:-0.280800340622;JUN:-0.284123812175;XBP1:-0.293920412606;NFIX:-0.319269583175;GFI1B:-0.348614215783;SPIB:-0.352536260487;CEBPA,B_DDIT3:-0.360153184307;ALX4:-0.361933693215;XCPE1{core}:-0.380446765549;HNF1A:-0.383787664034;NANOG:-0.385364542078;PAX6:-0.388994760632;GATA6:-0.416749624415;MYFfamily:-0.450917473887;FOXO1,3,4:-0.460556071515;NFIL3:-0.473031795392;NKX3-2:-0.474217119734;NFE2L2:-0.493799066673;RUNX1..3:-0.494301318914;TLX2:-0.500540499191;MTF1:-0.504903551592;NFKB1_REL_RELA:-0.50795941823;TAL1_TCF{3,4,12}:-0.521848785092;FOXA2:-0.534888329017;EBF1:-0.57131422961;TEAD1:-0.574172381404;HIC1:-0.59468816737;IRF1,2:-0.599600122574;HES1:-0.642005863741;ZNF238:-0.642722935946;HNF4A_NR2F1,2:-0.644864579266;SPI1:-0.673847509637;EP300:-0.676519292458;IRF7:-0.676531315097;SRF:-0.696501713941;MAFB:-0.713793839853;TFAP2{A,C}:-0.716136612568;SOX2:-0.717274366863;LMO2:-0.729108902667;NFE2:-0.73143370006;STAT2,4,6:-0.735011912376;TP53:-0.741984286029;AR:-0.75444688592;ELF1,2,4:-0.759466970008;FOS_FOS{B,L1}_JUN{B,D}:-0.766082922391;NANOG{mouse}:-0.773836554888;SNAI1..3:-0.778560796942;HLF:-0.785275154744;ZEB1:-0.81109435967;HBP1_HMGB_SSRP1_UBTF:-0.818093358351;HMX1:-0.85295447092;FOSL2:-0.880942142748;MYOD1:-0.897924152322;SPZ1:-0.902574261879;MYBL2:-0.91407707129;BACH2:-0.927860891287;ETS1,2:-0.931669344735;NR1H4:-0.977957660531;TBX4,5:-0.992779540648;LEF1_TCF7_TCF7L1,2:-1.06206063657;TGIF1:-1.10292293193;HSF1,2:-1.12863038597;GLI1..3:-1.15118102103;ESRRA:-1.19844932787;GCM1,2:-1.20292859407;HIF1A:-1.21133811494;SMAD1..7,9:-1.23029076256;NR3C1:-1.23417167821;HAND1,2:-1.28989515865;PPARG:-1.30946425009;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.36292223969;NR5A1,2:-1.39442946492;IKZF1:-1.45382574991;NFATC1..3:-1.48337395688;FOX{F1,F2,J1}:-1.49365836515;VSX1,2:-1.56133730371;RXRA_VDR{dimer}:-1.63774155407;TFAP4:-1.63869669236;ZNF148:-1.9270647122;TFCP2:-1.93321115773;ESR1:-2.07261836761 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10663-109C6;search_select_hide=table117:FF:10663-109C6 | |||
}} | }} | ||
Latest revision as of 14:32, 3 June 2020
| Name: | neuroectodermal tumor cell line:FU-RPNT-2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11753 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11753
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11753
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.718 |
| 10 | 10 | 0.98 |
| 100 | 100 | 0.418 |
| 101 | 101 | 0.606 |
| 102 | 102 | 0.814 |
| 103 | 103 | 0.0021 |
| 104 | 104 | 0.686 |
| 105 | 105 | 0.36 |
| 106 | 106 | 0.0356 |
| 107 | 107 | 0.0759 |
| 108 | 108 | 0.7 |
| 109 | 109 | 0.125 |
| 11 | 11 | 0.673 |
| 110 | 110 | 0.697 |
| 111 | 111 | 0.912 |
| 112 | 112 | 0.648 |
| 113 | 113 | 0.997 |
| 114 | 114 | 0.068 |
| 115 | 115 | 0.304 |
| 116 | 116 | 0.508 |
| 117 | 117 | 0.953 |
| 118 | 118 | 0.591 |
| 119 | 119 | 0.732 |
| 12 | 12 | 0.55 |
| 120 | 120 | 0.391 |
| 121 | 121 | 0.353 |
| 122 | 122 | 0.121 |
| 123 | 123 | 4.31211e-5 |
| 124 | 124 | 0.499 |
| 125 | 125 | 0.813 |
| 126 | 126 | 0.119 |
| 127 | 127 | 0.127 |
| 128 | 128 | 0.436 |
| 129 | 129 | 0.456 |
| 13 | 13 | 0.289 |
| 130 | 130 | 0.938 |
| 131 | 131 | 0.706 |
| 132 | 132 | 0.379 |
| 133 | 133 | 0.717 |
| 134 | 134 | 0.931 |
| 135 | 135 | 0.0866 |
| 136 | 136 | 0.208 |
| 137 | 137 | 0.21 |
| 138 | 138 | 0.521 |
| 139 | 139 | 0.764 |
| 14 | 14 | 0.688 |
| 140 | 140 | 0.874 |
| 141 | 141 | 0.863 |
| 142 | 142 | 0.535 |
| 143 | 143 | 0.00229 |
| 144 | 144 | 0.481 |
| 145 | 145 | 0.878 |
| 146 | 146 | 0.965 |
| 147 | 147 | 0.574 |
| 148 | 148 | 0.0674 |
| 149 | 149 | 0.124 |
| 15 | 15 | 0.455 |
| 150 | 150 | 0.364 |
| 151 | 151 | 0.365 |
| 152 | 152 | 0.00809 |
| 153 | 153 | 0.391 |
| 154 | 154 | 0.165 |
| 155 | 155 | 0.618 |
| 156 | 156 | 0.491 |
| 157 | 157 | 0.82 |
| 158 | 158 | 0.267 |
| 159 | 159 | 0.298 |
| 16 | 16 | 0.26 |
| 160 | 160 | 0.901 |
| 161 | 161 | 0.259 |
| 162 | 162 | 0.547 |
| 163 | 163 | 0.794 |
| 164 | 164 | 0.479 |
| 165 | 165 | 0.546 |
| 166 | 166 | 0.701 |
| 167 | 167 | 0.542 |
| 168 | 168 | 0.62 |
| 169 | 169 | 0.0101 |
| 17 | 17 | 0.268 |
| 18 | 18 | 0.168 |
| 19 | 19 | 0.139 |
| 2 | 2 | 0.0808 |
| 20 | 20 | 0.257 |
| 21 | 21 | 0.138 |
| 22 | 22 | 0.0578 |
| 23 | 23 | 0.0101 |
| 24 | 24 | 0.192 |
| 25 | 25 | 0.467 |
| 26 | 26 | 0.813 |
| 27 | 27 | 0.112 |
| 28 | 28 | 0.632 |
| 29 | 29 | 0.845 |
| 3 | 3 | 0.746 |
| 30 | 30 | 0.0893 |
| 31 | 31 | 0.221 |
| 32 | 32 | 0.0653 |
| 33 | 33 | 0.788 |
| 34 | 34 | 0.11 |
| 35 | 35 | 0.982 |
| 36 | 36 | 0.348 |
| 37 | 37 | 0.309 |
| 38 | 38 | 0.465 |
| 39 | 39 | 0.833 |
| 4 | 4 | 0.554 |
| 40 | 40 | 0.755 |
| 41 | 41 | 0.0552 |
| 42 | 42 | 0.58 |
| 43 | 43 | 0.338 |
| 44 | 44 | 0.307 |
| 45 | 45 | 0.152 |
| 46 | 46 | 0.451 |
| 47 | 47 | 0.872 |
| 48 | 48 | 0.915 |
| 49 | 49 | 0.951 |
| 5 | 5 | 0.454 |
| 50 | 50 | 0.845 |
| 51 | 51 | 0.775 |
| 52 | 52 | 0.308 |
| 53 | 53 | 0.148 |
| 54 | 54 | 0.517 |
| 55 | 55 | 0.623 |
| 56 | 56 | 0.752 |
| 57 | 57 | 0.349 |
| 58 | 58 | 0.563 |
| 59 | 59 | 0.0257 |
| 6 | 6 | 0.0783 |
| 60 | 60 | 0.114 |
| 61 | 61 | 0.325 |
| 62 | 62 | 0.205 |
| 63 | 63 | 0.96 |
| 64 | 64 | 0.776 |
| 65 | 65 | 0.286 |
| 66 | 66 | 0.574 |
| 67 | 67 | 0.918 |
| 68 | 68 | 0.714 |
| 69 | 69 | 0.478 |
| 7 | 7 | 0.869 |
| 70 | 70 | 0.35 |
| 71 | 71 | 0.612 |
| 72 | 72 | 0.323 |
| 73 | 73 | 0.0488 |
| 74 | 74 | 0.0854 |
| 75 | 75 | 0.873 |
| 76 | 76 | 0.197 |
| 77 | 77 | 0.132 |
| 78 | 78 | 0.718 |
| 79 | 79 | 0.545 |
| 8 | 8 | 0.706 |
| 80 | 80 | 0.0437 |
| 81 | 81 | 0.844 |
| 82 | 82 | 0.826 |
| 83 | 83 | 0.727 |
| 84 | 84 | 0.281 |
| 85 | 85 | 0.133 |
| 86 | 86 | 0.722 |
| 87 | 87 | 0.453 |
| 88 | 88 | 0.442 |
| 89 | 89 | 0.0195 |
| 9 | 9 | 0.032 |
| 90 | 90 | 0.274 |
| 91 | 91 | 0.671 |
| 92 | 92 | 0.373 |
| 93 | 93 | 0.406 |
| 94 | 94 | 0.587 |
| 95 | 95 | 0.378 |
| 96 | 96 | 0.747 |
| 97 | 97 | 0.822 |
| 98 | 98 | 0.567 |
| 99 | 99 | 0.705 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11753
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:171 neuroectodermal tumor
EFO:0002091 biological replicate
FF:0000003 cell line sample
FF:0000210 human sample
UBERON:0002346 neurectoderm
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
2994 (germ cell cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000479 (tissue)
0002346 (neurectoderm)
0004121 (ectoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0001062 (anatomical entity)
0010316 (germ layer / neural crest)
0005291 (embryonic tissue)
0010317 (germ layer / neural crest derived structure)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
