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{{f5samples
{{f5samples
|F5samples=
|DRA_sample_Accession=CAGE@SAMD00004689
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000079,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000473,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000991,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003101,UBERON:0003133,UBERON:0003135,UBERON:0004120,UBERON:0004176,UBERON:0004458,UBERON:0005156,UBERON:0005423,UBERON:0005564,UBERON:0009117,UBERON:0009196
|accession_numbers=CAGE;DRX008022;DRR008894;DRZ000319;DRZ001704;DRZ011669;DRZ013054
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000039,CL:0000063,CL:0000066,CL:0000144,CL:0000255,CL:0000548,CL:0000586
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000473,UBERON:0000991,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003101,UBERON:0000079
|ancestors_in_disease_facet=DOID:0050686,DOID:0050687,DOID:14566,DOID:162,DOID:193,DOID:2994,DOID:305,DOID:3095,DOID:4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255,CL:0000039,CL:0000586
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:193,DOID:3095,DOID:305,DOID:2994
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0101560
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr8:145701192..145701241,-!p1@FOXH1!2.35!222.13!FOXH1;;chr20:31350184..31350200,+!p1@DNMT3B!2.34!437.33!DNMT3B;;chr10:135043702..135043729,+!p1@UTF1!2.30!197.55!UTF1;;chr4:188916918..188916942,+!p1@ZFP42!2.01!101.38!ZFP42;;chr3:181429704..181429722,+!p1@SOX2!1.98!94.75!SOX2;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.98!93.73!ZNF676;;chr19:22469236..22469266,+!p1@ZNF729!1.97!92.40!ZNF729;;chr19:22193731..22193751,-!p1@ZNF208!1.96!90.87!ZNF208;;chr21:45681774..45681821,-!p1@DNMT3L!1.96!90.87!DNMT3L;;chr17:7493405..7493419,-!p1@SOX15!1.93!84.55!SOX15;;chr19:20278043..20278054,+!p2@ZNF486!1.91!80.47!ZNF486;;chr6:29648890..29648944,-!p1@ZFP57!1.89!76.19!ZFP57;;chr16:3149278..3149305,-!p1@ZSCAN10!1.86!72.21!ZSCAN10;;chr6:31138439..31138475,-!p1@POU5F1!1.86!71.39!POU5F1;;chr12:19556998..19557013,+!p6@AEBP2!1.82!64.97!AEBP2;;chr10:70320074..70320106,+!p1@TET1!1.77!113.62!TET1;;chr8:73921136..73921151,+!p2@TERF1!1.73!78.43!TERF1;;chr19:20188776..20188826,+!p1@ZNF90!1.72!132.89!ZNF90;;chr2:122042770..122042785,-!p1@TFCP2L1!1.72!51.20!TFCP2L1;;chr21:45681737..45681760,-!p2@DNMT3L!1.71!50.69!DNMT3L;;chr10:126138597..126138612,-!p1@NKX1-2!1.70!49.36!NKX1-2;;chr8:70983476..70983493,-!p1@PRDM14!1.68!46.81!PRDM14;;chrX:136648279..136648295,+!p1@ZIC3!1.68!46.71!ZIC3;;chr2:25475094..25475112,-!p3@DNMT3A!1.68!46.40!DNMT3A;;chr1:44584485..44584512,+!p2@KLF17!1.66!45.18!KLF17;;chr7:63505799..63505904,+!p1@ZNF727!1.63!41.41!ZNF727;;chr10:135043493..135043510,+!p2@UTF1!1.61!39.88!UTF1;;chr8:145701166..145701187,-!p2@FOXH1!1.60!38.96!FOXH1;;chr19:20278012..20278034,+!p1@ZNF486!1.58!299.34!ZNF486;;chr17:41622765..41622821,-!p2@ETV4!1.57!54.67!ETV4;;chr17:41622925..41622976,-!p3@ETV4!1.57!53.65!ETV4;;chr3:181429741..181429767,+!p2@SOX2!1.52!31.82!SOX2;;chr20:55204351..55204377,+!p1@TFAP2C!1.50!39.06!TFAP2C;;chr17:46622205..46622218,-!p3@HOXB2!1.50!34.88!HOXB2;;chr20:55205825..55205847,+!p2@TFAP2C!1.50!30.80!TFAP2C;;chr9:127358120..127358170,-!p3@NR6A1!1.50!30.60!NR6A1;;chr8:37963466..37963506,+!p3@ASH2L!1.49!37.43!ASH2L;;chr17:41622834..41622883,-!p6@ETV4!1.47!33.96!ETV4;;chr1:164528687..164528711,+!p6@PBX1!1.46!32.64!PBX1;;chr2:88752207..88752218,-!p1@FOXI3!1.44!26.42!FOXI3;;chrX:136648643..136648711,+!p2@ZIC3!1.43!25.91!ZIC3;;chr19:22605097..22605121,-!p2@ZNF98!1.43!25.70!ZNF98;;chr12:7941989..7942014,+!p1@NANOG!1.42!25.40!NANOG;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.41!24.89!PEG3;;chr7:57509877..57509895,+!p1@ZNF716!1.41!24.89!ZNF716;;chr19:12163769..12163798,-!p1@ZNF878!1.40!30.90!ZNF878;;chr10:135051353..135051367,+!p1@VENTX!1.40!24.17!VENTX;;chr2:25475120..25475176,-!p2@DNMT3A!1.39!31.82!DNMT3A;;chr8:70983443..70983460,-!p2@PRDM14!1.38!23.15!PRDM14;;chr2:16080659..16080685,+!p1@MYCN!1.37!22.64!MYCN;;chr9:114287433..114287513,+!p1@ZNF483!1.36!55.99!ZNF483;;chr5:149546334..149546364,+!p1@CDX1!1.35!21.42!CDX1;;chr19:22235279..22235301,+!p1@ZNF257!1.33!37.74!ZNF257;;chr20:50418972..50419029,-!p1@SALL4!1.33!20.50!SALL4;;chr19:20188831..20188844,+!p2@ZNF90!1.32!19.79!ZNF90;;chr20:20348740..20348757,+!p1@INSM1!1.32!19.68!INSM1;;chr19:22469215..22469229,+!p2@ZNF729!1.31!19.48!ZNF729;;chr1:6304233..6304243,+!p1@HES3!1.30!18.77!HES3;;chr7:14028743..14028799,-!p3@ETV1!1.29!23.25!ETV1;;chr4:299227..299272,-!p1@ZNF732!1.28!17.95!ZNF732;;chr20:42295745..42295765,+!p1@MYBL2!1.27!281.49!MYBL2;;chr7:20826504..20826526,-!p1@SP8!1.27!17.75!SP8;;chrX:139587228..139587234,-!p1@SOX3!1.27!17.54!SOX3;;chr19:22817119..22817145,+!p1@ZNF492!1.26!28.66!ZNF492;;chr12:19556960..19556982,+!p10@AEBP2!1.26!17.24!AEBP2;;chrX:136648297..136648319,+!p3@ZIC3!1.26!17.03!ZIC3;;chr6:15246200..15246214,+!p2@JARID2!1.25!46.20!JARID2;;chr20:55205791..55205817,+!p3@TFAP2C!1.25!16.83!TFAP2C;;chr14:57272369..57272391,-!p2@OTX2!1.25!16.62!OTX2;;chr3:185797712..185797746,-!p6@ETV5!1.24!16.42!ETV5;;chr5:2751762..2751784,-!p1@IRX2!1.24!16.32!IRX2;;chr12:3068544..3068597,+!p1@TEAD4!1.23!94.65!TEAD4;;chr1:201979703..201979721,+!p2@ELF3!1.23!16.11!ELF3;;chr19:22605136..22605154,-!p1@ZNF98!1.23!15.91!ZNF98;;chr1:247171316..247171336,-!p3@ZNF695!1.22!23.25!ZNF695;;chr1:63788229..63788250,+!p1@FOXD3!1.22!15.60!FOXD3;;chr20:50419055..50419066,-!p3@SALL4!1.21!15.20!SALL4;;chr19:9609272..9609297,-!p1@ZNF560!1.19!14.58!ZNF560;;chr1:40367668..40367684,-!p2@MYCL1!1.18!14.07!MYCL1;;chr19:20011775..20011800,+!p2@ZNF93!1.17!24.48!ZNF93;;chr1:6479968..6479986,-!p1@HES2!1.17!13.67!HES2;;chr19:22193706..22193717,-!p2@ZNF208!1.16!13.56!ZNF208;;chr19:20150268..20150298,-!p2@ZNF682!1.15!24.58!ZNF682;;chr1:247171347..247171366,-!p2@ZNF695!1.15!23.76!ZNF695;;chr19:21950332..21950356,-!p2@ZNF100!1.14!26.93!ZNF100;;chr2:16081912..16081931,+!p2@MYCN!1.13!12.54!MYCN;;chr8:37963407..37963454,+!p2@ASH2L!1.12!36.41!ASH2L;;chr17:41622731..41622764,-!p5@ETV4!1.12!12.24!ETV4;;chr1:44584568..44584585,+!p3@KLF17!1.12!12.24!KLF17;;chr6:15246261..15246312,+!p1@JARID2!1.10!278.43!JARID2;;chr19:23433144..23433204,-!p1@ZNF724P!1.10!51.91!ZNF724P;;chr15:74833584..74833626,+!p1@ARID3B!1.10!27.43!ARID3B;;chr20:42295713..42295738,+!p2@MYBL2!1.08!66.29!MYBL2;;chr1:201979743..201979762,+!p1@ELF3!1.08!11.12!ELF3;;chr9:96717629..96717644,-!p1@BARX1!1.08!10.91!BARX1;;chr6:43337180..43337244,-!p1@ZNF318!1.06!40.59!ZNF318;;chr17:41623009..41623053,-!p4@ETV4!1.06!17.03!ETV4;;chr17:46608354..46608385,-!p1@HOXB1!1.05!10.20!HOXB1;;chr11:63684602..63684664,-!p1@RCOR2!1.03!19.38!RCOR2;;chr19:20011744..20011770,+!p1@ZNF93!1.02!37.33!ZNF93;;chr19:22398533..22398542,-!p@chr19:22398533..22398542,-!1.02!9.48!ZNF676;;chr5:172662197..172662216,-!p1@NKX2-5!1.02!9.48!NKX2-5;;chr19:52932395..52932413,+!p1@ZNF534!1.02!9.38!ZNF534;;chr19:23869970..23869991,-!p1@ZNF675!1.01!35.59!ZNF675;;chr10:135044123..135044144,+!p5@UTF1!1.01!9.28!UTF1;;chr10:70320041..70320065,+!p2@TET1!1.01!9.28!TET1;;chr19:52932444..52932455,+!p2@ZNF534!1.00!9.08!ZNF534;;chr17:41623692..41623715,-!p1@ETV4!0.99!38.35!ETV4;;chr19:22966893..22966924,-!p2@ZNF99!0.99!8.87!ZNF99;;chr12:3068634..3068656,+!p5@TEAD4!0.99!8.77!TEAD4;;chr3:48282587..48282603,+!p1@ZNF589!0.98!39.27!ZNF589;;chr19:53289995..53290050,-!p1@ZNF600!0.98!36.21!ZNF600;;chr7:64023410..64023428,-!p2@ZNF680!0.98!13.67!ZNF680;;chr22:19748231..19748317,+!p1@TBX1!0.96!8.16!TBX1;;chr10:70320115..70320126,+!p3@TET1!0.96!8.16!TET1;;chr17:46132044..46132080,+!p4@NFE2L1!0.96!8.06!NFE2L1;;chr19:45579725..45579743,-!p1@ZNF296!0.95!36.72!ZNF296;;chr7:64254834..64254854,+!p2@ZNF138!0.95!14.69!ZNF138;;chr6:15246217..15246228,+!p3@JARID2!0.95!14.38!JARID2;;chr1:209979467..209979494,-!p1@IRF6!0.94!8.67!IRF6;;chr8:70983506..70983522,-!p3@PRDM14!0.94!7.65!PRDM14;;chr6:34204672..34204692,+!p1@HMGA1!0.93!871.60!HMGA1;;chr9:132427972..132428056,+!p1@PRRX2!0.93!9.89!PRRX2;;chr10:126138622..126138638,-!p2@NKX1-2!0.93!7.55!NKX1-2;;chr3:57234000..57234014,-!p1@HESX1!0.93!7.45!HESX1;;chr8:86089627..86089653,+!p3@E2F5!0.92!8.26!E2F5;;chr7:14028488..14028516,-!p2@ETV1!0.92!8.06!ETV1;;chr7:20826426..20826432,-!p2@SP8!0.92!7.34!SP8;;chr2:237077022..237077038,-!p1@GBX2!0.92!7.34!GBX2;;chr19:22966925..22966958,-!p1@ZNF99!0.92!7.24!ZNF99;;chr12:80084167..80084197,-!p5@PAWR!0.91!17.13!PAWR;;chr19:23299814..23299844,+!p1@ZNF730!0.91!8.87!ZNF730;;chr15:85147079..85147099,+!p4@ZSCAN2!0.91!7.04!ZSCAN2;;chr19:23941647..23941672,-!p2@ZNF681!0.90!11.83!ZNF681;;chr19:47523058..47523114,+!p1@NPAS1!0.90!6.94!NPAS1;;chr4:26322267..26322334,+!p3@RBPJ!0.89!16.83!RBPJ;;chr12:80084137..80084165,-!p10@PAWR!0.88!8.57!PAWR;;chr1:52902618..52902666,-!p11@ZCCHC11!0.88!6.63!ZCCHC11;;chr7:57509910..57509917,+!p2@ZNF716!0.88!6.63!ZNF716;;chr8:128428066..128428078,+!p1@POU5F1B!0.88!6.53!POU5F1B;;chr3:121286771..121286805,+!p1@ARGFX!0.88!6.53!ARGFX;;chr17:41622982..41623001,-!p11@ETV4!0.87!6.43!ETV4;;chr14:21994337..21994442,-!p1@SALL2!0.86!18.05!SALL2;;chr4:206390..206444,+!p1@ZNF876P!0.86!11.42!ZNF876P;;chr8:73921067..73921078,+!p3@TERF1!0.86!10.10!TERF1;;chr17:46622229..46622257,-!p6@HOXB2!0.86!7.34!HOXB2;;chr16:3149266..3149277,-!p2@ZSCAN10!0.86!6.32!ZSCAN10;;chr2:237076992..237077008,-!p2@GBX2!0.86!6.32!GBX2;;chr2:88752231..88752245,-!p2@FOXI3!0.86!6.32!FOXI3;;chr8:102504651..102504683,+!p1@GRHL2!0.86!6.22!GRHL2;;chr10:135043690..135043701,+!p4@UTF1!0.86!6.22!UTF1;;chr2:42795745..42795824,+!p1@MTA3!0.85!59.36!MTA3;;chr12:19592405..19592492,+!p2@AEBP2!0.85!55.07!AEBP2;;chr14:55493763..55493824,-!p1@WDHD1!0.85!48.24!WDHD1;;chr12:7079780..7079791,-!p2@PHB2!0.85!34.06!PHB2;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.85!29.58!TAL1;;chr19:20959098..20959117,+!p1@ZNF66P!0.85!26.82!ZNF66P;;chr17:41623667..41623682,-!p8@ETV4!0.85!6.63!ETV4;;chr21:45705752..45705767,+!p1@AIRE!0.85!6.02!AIRE;;chr12:6798692..6798723,-!p5@ZNF384!0.84!10.10!ZNF384;;chr3:71355163..71355209,-!p5@FOXP1!0.84!8.47!FOXP1;;chr19:52956798..52956843,+!p1@ZNF578!0.83!12.03!ZNF578;;chr1:40367530..40367597,-!p1@MYCL1!0.83!10.91!MYCL1;;chr12:6798731..6798751,-!p4@ZNF384!0.83!9.08!ZNF384;;chr9:132427883..132427951,+!p2@PRRX2!0.83!5.71!PRRX2;;chr1:204042233..204042249,+!p1@SOX13!0.82!38.25!SOX13;;chr12:3069037..3069119,+!p2@TEAD4!0.82!20.81!TEAD4;;chr21:45681768..45681773,-!p4@DNMT3L!0.82!5.61!DNMT3L;;chr19:19976683..19976709,+!p1@ZNF253!0.81!25.70!ZNF253;;chr19:12203100..12203132,+!p1@ZNF788!0.81!11.52!ZNF788;;chr11:65554528..65554546,+!p1@OVOL1!0.81!5.51!OVOL1;;chr8:86089417..86089440,+!p2@E2F5!0.80!11.01!E2F5;;chr7:28725715..28725727,+!p3@CREB5!0.80!6.43!CREB5;;chr10:8096772..8096787,+!p2@GATA3!0.80!6.32!GATA3;;chr14:22005197..22005261,-!p3@SALL2!0.80!5.30!SALL2;;chr19:23299851..23299880,+!p2@ZNF730!0.80!5.30!ZNF730;;chr10:97889464..97889494,+!p3@ZNF518A!0.79!10.10!ZNF518A;;chr15:74833547..74833567,+!p2@ARID3B!0.79!7.45!ARID3B;;chr10:48355030..48355090,+!p1@ZNF488!0.79!6.83!ZNF488;;chr19:38720294..38720348,-!p1@DPF1!0.79!6.53!DPF1;;chr1:40367692..40367703,-!p3@MYCL1!0.79!5.20!MYCL1;;chr12:54694653..54694672,-!p2@NFE2!0.79!5.20!NFE2;;chr19:21264991..21265026,+!p1@ZNF714!0.78!35.90!ZNF714;;chr7:148844205..148844236,+!p5@ZNF398!0.78!6.22!ZNF398;;chr8:144512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|ffid_belonging_in_development=UBERON:0009117,UBERON:0002532,UBERON:0006603,UBERON:0005564,UBERON:0010316
|fonse_cell_line=FF:0101120,FF:0101560
|fonse_cell_line=FF:0101120,FF:0101560
|fonse_cell_line_closure=FF:0101120,FF:0101560
|fonse_cell_line_closure=FF:0101120,FF:0101560
Line 35: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/testicular%2520germ%2520cell%2520embryonal%2520carcinoma%2520cell%2520line%253aITO-II.CNhs11876.10786-110H3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/testicular%2520germ%2520cell%2520embryonal%2520carcinoma%2520cell%2520line%253aITO-II.CNhs11876.10786-110H3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/testicular%2520germ%2520cell%2520embryonal%2520carcinoma%2520cell%2520line%253aITO-II.CNhs11876.10786-110H3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/testicular%2520germ%2520cell%2520embryonal%2520carcinoma%2520cell%2520line%253aITO-II.CNhs11876.10786-110H3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/testicular%2520germ%2520cell%2520embryonal%2520carcinoma%2520cell%2520line%253aITO-II.CNhs11876.10786-110H3.hg38.nobarcode.ctss.bed.gz
|id=FF:10786-110H3
|id=FF:10786-110H3
|is_a=CL:0000586;;DOID:3095;;EFO:0002091;;FF:0000003;;FF:0000210;;FF:0100297;;FF:0101560;;UBERON:0000922
|is_a=CL:0000586;;DOID:3095;;EFO:0002091;;FF:0000210;;FF:0100297;;FF:0101560;;UBERON:0000922
|is_obsolete=
|library_id=CNhs11876
|library_id_phase_based=2:CNhs11876
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10786
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10786
|name=testicular germ cell embryonal carcinoma cell line:ITO-II
|name=testicular germ cell embryonal carcinoma cell line:ITO-II
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11876,LSID830,release010,COMPLETED
|profile_hcage=CNhs11876,LSID830,release010,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=110
|rna_box=110
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=32.62329
|rna_weight_ug=32.62329
|sample_age=unknown
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=jcrb0613
|sample_cell_catalog=jcrb0613
|sample_cell_line=ITO-II
|sample_cell_line=ITO-II
Line 69: Line 91:
|sample_ethnicity=unknown
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.8001985947893e-285!GO:0043226;organelle;2.62906325153412e-241!GO:0043229;intracellular organelle;6.12895607490871e-241!GO:0043231;intracellular membrane-bound organelle;2.48551766535701e-233!GO:0043227;membrane-bound organelle;3.66403092933134e-233!GO:0005737;cytoplasm;9.17667147118397e-182!GO:0044422;organelle part;6.00844661256755e-162!GO:0044446;intracellular organelle part;2.04958184000106e-160!GO:0044444;cytoplasmic part;4.04805177393086e-122!GO:0005634;nucleus;7.84134264928312e-113!GO:0032991;macromolecular complex;2.41782737494885e-107!GO:0044237;cellular metabolic process;7.58766766943318e-107!GO:0044238;primary metabolic process;1.24896095848902e-106!GO:0043170;macromolecule metabolic process;3.05724628741355e-104!GO:0030529;ribonucleoprotein complex;2.36154721285953e-95!GO:0044428;nuclear part;2.50162780289223e-86!GO:0003723;RNA binding;2.02899865388162e-84!GO:0043233;organelle lumen;4.40311968891335e-76!GO:0031974;membrane-enclosed lumen;4.40311968891335e-76!GO:0043283;biopolymer metabolic process;8.82382988887916e-71!GO:0005515;protein binding;2.3071827165795e-69!GO:0010467;gene expression;7.01662749665191e-65!GO:0005739;mitochondrion;3.69621803871577e-64!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.10274895716195e-63!GO:0005840;ribosome;2.17975816356968e-57!GO:0006396;RNA processing;5.65451102512374e-57!GO:0006412;translation;6.46318193427531e-55!GO:0016043;cellular component organization and biogenesis;5.19302910336845e-53!GO:0043234;protein complex;6.45920274806805e-53!GO:0003735;structural constituent of ribosome;2.14289080426227e-50!GO:0031981;nuclear lumen;1.01764705693543e-49!GO:0031090;organelle membrane;1.17314458592469e-49!GO:0043228;non-membrane-bound organelle;6.42600532770415e-48!GO:0043232;intracellular non-membrane-bound organelle;6.42600532770415e-48!GO:0006996;organelle organization and biogenesis;3.10259901311973e-45!GO:0019538;protein metabolic process;5.20831181763127e-45!GO:0003676;nucleic acid binding;1.01740106045097e-44!GO:0033279;ribosomal subunit;9.98698082083884e-44!GO:0016071;mRNA metabolic process;1.08871090463973e-43!GO:0044429;mitochondrial part;1.84369309635564e-43!GO:0009058;biosynthetic process;2.39446960061101e-43!GO:0031967;organelle envelope;9.03109130707508e-43!GO:0044249;cellular biosynthetic process;1.2919653598807e-42!GO:0031975;envelope;1.77045267813685e-42!GO:0009059;macromolecule biosynthetic process;1.54836470110984e-40!GO:0008380;RNA splicing;1.75341971999466e-40!GO:0044267;cellular protein metabolic process;3.84849945273406e-40!GO:0044260;cellular macromolecule metabolic process;1.07763461387766e-39!GO:0033036;macromolecule localization;6.98978148702197e-39!GO:0015031;protein transport;7.953744900826e-39!GO:0006259;DNA metabolic process;1.15667312564178e-36!GO:0006397;mRNA processing;2.03841239759053e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.67379880308028e-36!GO:0046907;intracellular transport;3.28291527695955e-35!GO:0065003;macromolecular complex assembly;8.17846447729846e-35!GO:0016070;RNA metabolic process;1.43676216058499e-34!GO:0008104;protein localization;3.80541596714773e-34!GO:0045184;establishment of protein localization;1.41290548370441e-33!GO:0022607;cellular component assembly;6.38806378077344e-33!GO:0005829;cytosol;4.93653532801165e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.40462389860928e-31!GO:0000166;nucleotide binding;3.08478639720224e-30!GO:0005654;nucleoplasm;3.08939289658394e-29!GO:0007049;cell cycle;3.60655923988044e-29!GO:0005681;spliceosome;7.26365516613365e-29!GO:0019866;organelle inner membrane;4.16916451153717e-28!GO:0005740;mitochondrial envelope;8.23496389889258e-28!GO:0006886;intracellular protein transport;8.25602481046777e-27!GO:0031966;mitochondrial membrane;5.97214470050066e-26!GO:0005743;mitochondrial inner membrane;2.31331994933969e-25!GO:0044445;cytosolic part;5.6254303277797e-24!GO:0051649;establishment of cellular localization;1.31742283945274e-23!GO:0006119;oxidative phosphorylation;2.14029053529237e-23!GO:0051641;cellular localization;2.50733155055494e-23!GO:0015934;large ribosomal subunit;4.09750248910852e-23!GO:0005694;chromosome;4.74603269165645e-23!GO:0044451;nucleoplasm part;7.26852385334403e-23!GO:0016462;pyrophosphatase activity;4.36341969673911e-22!GO:0005730;nucleolus;4.92644909542023e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;8.43935357309921e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.8362997452715e-22!GO:0015935;small ribosomal subunit;1.01077569000266e-21!GO:0022402;cell cycle process;1.06723500345413e-21!GO:0032553;ribonucleotide binding;1.50174593081593e-21!GO:0032555;purine ribonucleotide binding;1.50174593081593e-21!GO:0017111;nucleoside-triphosphatase activity;1.90916823996497e-21!GO:0000278;mitotic cell cycle;3.8772920706213e-21!GO:0006974;response to DNA damage stimulus;5.02573445876448e-21!GO:0012505;endomembrane system;6.94494371565947e-21!GO:0017076;purine nucleotide binding;2.46254721002197e-20!GO:0044455;mitochondrial membrane part;3.04805822820371e-20!GO:0022618;protein-RNA complex assembly;3.6293364103426e-20!GO:0044427;chromosomal part;1.03595442110261e-19!GO:0016874;ligase activity;1.63577737632526e-19!GO:0044265;cellular macromolecule catabolic process;3.60029453540536e-19!GO:0022403;cell cycle phase;4.38140629407303e-19!GO:0005524;ATP binding;4.44749731964724e-19!GO:0006512;ubiquitin cycle;8.02000374701281e-19!GO:0032559;adenyl ribonucleotide binding;1.18188916027583e-18!GO:0051276;chromosome organization and biogenesis;1.25069517602163e-18!GO:0031980;mitochondrial lumen;1.74252408903923e-18!GO:0005759;mitochondrial matrix;1.74252408903923e-18!GO:0000087;M phase of mitotic cell cycle;2.91038396305149e-18!GO:0007067;mitosis;4.35268414956018e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;8.63462073851439e-18!GO:0019941;modification-dependent protein catabolic process;1.81068647024177e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.81068647024177e-17!GO:0044257;cellular protein catabolic process;2.49495281958623e-17!GO:0030554;adenyl nucleotide binding;2.86645419471492e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.36877145507918e-17!GO:0048770;pigment granule;3.5888802134075e-17!GO:0042470;melanosome;3.5888802134075e-17!GO:0006281;DNA repair;5.63796433140046e-17!GO:0043285;biopolymer catabolic process;6.01794903559565e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.81401750955805e-17!GO:0051301;cell division;8.1510341295721e-17!GO:0006457;protein folding;1.1266383470101e-16!GO:0042254;ribosome biogenesis and assembly;1.28683700104682e-16!GO:0005746;mitochondrial respiratory chain;1.72294473447697e-16!GO:0009057;macromolecule catabolic process;1.76617039200068e-16!GO:0044453;nuclear membrane part;1.91589323675509e-16!GO:0000279;M phase;2.00713429321412e-16!GO:0008135;translation factor activity, nucleic acid binding;2.62645250994024e-16!GO:0043412;biopolymer modification;2.65084343566032e-16!GO:0031965;nuclear membrane;3.38431943446678e-16!GO:0006260;DNA replication;5.32949400498127e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.67025648751301e-16!GO:0005761;mitochondrial ribosome;7.67025648751301e-16!GO:0000313;organellar ribosome;7.67025648751301e-16!GO:0005635;nuclear envelope;8.71964745334479e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.61908302310062e-15!GO:0003954;NADH dehydrogenase activity;1.61908302310062e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.61908302310062e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;3.8507716841013e-15!GO:0000375;RNA splicing, via transesterification reactions;3.8507716841013e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.8507716841013e-15!GO:0030163;protein catabolic process;4.30306320735329e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.50948282695908e-15!GO:0005794;Golgi apparatus;1.21667916427055e-14!GO:0005643;nuclear pore;2.74083676605044e-14!GO:0009719;response to endogenous stimulus;2.86176036941555e-14!GO:0006605;protein targeting;3.27017542737575e-14!GO:0042623;ATPase activity, coupled;3.28412363190938e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;3.47162017528883e-14!GO:0016887;ATPase activity;3.73329504337053e-14!GO:0005783;endoplasmic reticulum;6.29404482059283e-14!GO:0051186;cofactor metabolic process;6.29404482059283e-14!GO:0008134;transcription factor binding;6.65762350806175e-14!GO:0006403;RNA localization;1.01000979657763e-13!GO:0006323;DNA packaging;1.22051143657867e-13!GO:0006464;protein modification process;1.23286991778636e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.35850634494395e-13!GO:0042773;ATP synthesis coupled electron transport;1.35850634494395e-13!GO:0044248;cellular catabolic process;1.9641544881036e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.51479614315175e-13!GO:0045271;respiratory chain complex I;2.51479614315175e-13!GO:0005747;mitochondrial respiratory chain complex I;2.51479614315175e-13!GO:0050657;nucleic acid transport;2.78838022236955e-13!GO:0051236;establishment of RNA localization;2.78838022236955e-13!GO:0050658;RNA transport;2.78838022236955e-13!GO:0004386;helicase activity;4.13927661417323e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.8750507443198e-13!GO:0050794;regulation of cellular process;8.25253045966869e-13!GO:0051082;unfolded protein binding;1.22406915794639e-12!GO:0006413;translational initiation;1.42595266240803e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.42688324520031e-12!GO:0006399;tRNA metabolic process;1.42688324520031e-12!GO:0006732;coenzyme metabolic process;1.52508863452298e-12!GO:0065002;intracellular protein transport across a membrane;2.39307844368091e-12!GO:0006446;regulation of translational initiation;2.69389516099545e-12!GO:0043687;post-translational protein modification;2.887360235907e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.39310599475112e-12!GO:0006913;nucleocytoplasmic transport;3.45726603632655e-12!GO:0003743;translation initiation factor activity;4.59212768686358e-12!GO:0016604;nuclear body;4.76423948812491e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.75995886771956e-12!GO:0019222;regulation of metabolic process;9.44782516046219e-12!GO:0044432;endoplasmic reticulum part;1.22650635322723e-11!GO:0051028;mRNA transport;1.28825723171095e-11!GO:0051169;nuclear transport;1.40931514134875e-11!GO:0008026;ATP-dependent helicase activity;1.46718116768189e-11!GO:0048193;Golgi vesicle transport;3.00441191040069e-11!GO:0006364;rRNA processing;4.46115150253245e-11!GO:0046930;pore complex;5.00248976481749e-11!GO:0000785;chromatin;8.14714870927065e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.34109346646256e-10!GO:0015630;microtubule cytoskeleton;1.71699882602305e-10!GO:0016072;rRNA metabolic process;1.83244103851404e-10!GO:0016607;nuclear speck;2.90008886654004e-10!GO:0006461;protein complex assembly;3.2933567021827e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.79852381710666e-10!GO:0008565;protein transporter activity;5.08349793716132e-10!GO:0008639;small protein conjugating enzyme activity;6.14199538968796e-10!GO:0030532;small nuclear ribonucleoprotein complex;6.638131504167e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.3045394606814e-09!GO:0004842;ubiquitin-protein ligase activity;1.35834311455125e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.74178180463609e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.74178180463609e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.74178180463609e-09!GO:0019787;small conjugating protein ligase activity;2.14037061462231e-09!GO:0016192;vesicle-mediated transport;2.72178023390371e-09!GO:0015986;ATP synthesis coupled proton transport;3.19769512963379e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.19769512963379e-09!GO:0065004;protein-DNA complex assembly;3.29895564208571e-09!GO:0009259;ribonucleotide metabolic process;4.8384882938545e-09!GO:0000074;regulation of progression through cell cycle;4.93296222298602e-09!GO:0005793;ER-Golgi intermediate compartment;4.95333849229943e-09!GO:0050789;regulation of biological process;5.57507214038963e-09!GO:0043038;amino acid activation;5.67886729007958e-09!GO:0006418;tRNA aminoacylation for protein translation;5.67886729007958e-09!GO:0043039;tRNA aminoacylation;5.67886729007958e-09!GO:0016740;transferase activity;5.74488714462701e-09!GO:0031323;regulation of cellular metabolic process;5.95720240703172e-09!GO:0006366;transcription from RNA polymerase II promoter;5.98595052006548e-09!GO:0009055;electron carrier activity;6.05750902825088e-09!GO:0051726;regulation of cell cycle;6.24761224750508e-09!GO:0051188;cofactor biosynthetic process;7.69306549604284e-09!GO:0006163;purine nucleotide metabolic process;8.5749841933319e-09!GO:0017038;protein import;1.2260571421064e-08!GO:0006261;DNA-dependent DNA replication;1.24827071597696e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.49550484052839e-08!GO:0016568;chromatin modification;1.54572850142783e-08!GO:0019829;cation-transporting ATPase activity;1.56837141457521e-08!GO:0006164;purine nucleotide biosynthetic process;2.09822768421911e-08!GO:0005789;endoplasmic reticulum membrane;2.9287972331651e-08!GO:0012501;programmed cell death;2.96504080754109e-08!GO:0016469;proton-transporting two-sector ATPase complex;2.99590734226018e-08!GO:0007010;cytoskeleton organization and biogenesis;3.14895609199379e-08!GO:0006350;transcription;3.30498635476385e-08!GO:0006915;apoptosis;3.34676238034405e-08!GO:0006333;chromatin assembly or disassembly;3.37466713499074e-08!GO:0009260;ribonucleotide biosynthetic process;3.41323968270259e-08!GO:0009150;purine ribonucleotide metabolic process;3.45649323780533e-08!GO:0009108;coenzyme biosynthetic process;3.60287186415088e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.17656647737296e-08!GO:0003712;transcription cofactor activity;5.03275305069613e-08!GO:0016881;acid-amino acid ligase activity;5.55258956253413e-08!GO:0003697;single-stranded DNA binding;7.10305497881068e-08!GO:0044431;Golgi apparatus part;7.68487688105318e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.40815584188989e-08!GO:0009060;aerobic respiration;8.93327397165027e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.18058730741799e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.18058730741799e-07!GO:0006754;ATP biosynthetic process;1.2561104447978e-07!GO:0006753;nucleoside phosphate metabolic process;1.2561104447978e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.39920595333803e-07!GO:0010468;regulation of gene expression;1.53694600716184e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.58924576517435e-07!GO:0032446;protein modification by small protein conjugation;1.64006075616162e-07!GO:0006752;group transfer coenzyme metabolic process;1.83133389549634e-07!GO:0009141;nucleoside triphosphate metabolic process;1.87258442160673e-07!GO:0051246;regulation of protein metabolic process;1.91342577633767e-07!GO:0000245;spliceosome assembly;2.16613361746126e-07!GO:0043566;structure-specific DNA binding;2.23802632686708e-07!GO:0007005;mitochondrion organization and biogenesis;2.27647706999074e-07!GO:0016779;nucleotidyltransferase activity;2.33900358890071e-07!GO:0046034;ATP metabolic process;2.42221616764835e-07!GO:0006793;phosphorus metabolic process;2.8378988734549e-07!GO:0006796;phosphate metabolic process;2.8378988734549e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.91904305795115e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.91904305795115e-07!GO:0031988;membrane-bound vesicle;2.99301686260566e-07!GO:0000775;chromosome, pericentric region;3.14405939866474e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.28417901716609e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.28417901716609e-07!GO:0016023;cytoplasmic membrane-bound vesicle;3.47938214936391e-07!GO:0016567;protein ubiquitination;3.72976035458706e-07!GO:0005768;endosome;4.46847063032816e-07!GO:0005819;spindle;4.59411566100998e-07!GO:0045333;cellular respiration;4.8534474873079e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.9687926282827e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.03242197245752e-07!GO:0009056;catabolic process;7.67368461901241e-07!GO:0003724;RNA helicase activity;7.8627247606755e-07!GO:0008219;cell death;1.00467989330478e-06!GO:0016265;death;1.00467989330478e-06!GO:0045259;proton-transporting ATP synthase complex;1.02369896672194e-06!GO:0043623;cellular protein complex assembly;1.06285947757512e-06!GO:0032774;RNA biosynthetic process;1.51827755197274e-06!GO:0000139;Golgi membrane;1.53846516402948e-06!GO:0008094;DNA-dependent ATPase activity;1.74113704196602e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.77906429504755e-06!GO:0007051;spindle organization and biogenesis;1.82358454573924e-06!GO:0006099;tricarboxylic acid cycle;1.83997297999384e-06!GO:0046356;acetyl-CoA catabolic process;1.83997297999384e-06!GO:0031982;vesicle;1.87967969947709e-06!GO:0006351;transcription, DNA-dependent;1.91620093124537e-06!GO:0005667;transcription factor complex;1.97092352906985e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.32408656531163e-06!GO:0003899;DNA-directed RNA polymerase activity;2.32408656531163e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.45536461120321e-06!GO:0031410;cytoplasmic vesicle;2.45536461120321e-06!GO:0031497;chromatin assembly;2.51482938373896e-06!GO:0048475;coated membrane;2.55272000456058e-06!GO:0030117;membrane coat;2.55272000456058e-06!GO:0006084;acetyl-CoA metabolic process;3.05770082582888e-06!GO:0051170;nuclear import;3.17002481210363e-06!GO:0009117;nucleotide metabolic process;3.3198307779034e-06!GO:0006334;nucleosome assembly;3.33810324208451e-06!GO:0016310;phosphorylation;3.64093490394055e-06!GO:0000151;ubiquitin ligase complex;5.39384550022471e-06!GO:0005874;microtubule;5.777448642738e-06!GO:0051168;nuclear export;6.04306250859399e-06!GO:0005762;mitochondrial large ribosomal subunit;6.12186632733034e-06!GO:0000315;organellar large ribosomal subunit;6.12186632733034e-06!GO:0051325;interphase;6.93794581925458e-06!GO:0005657;replication fork;7.58329340785057e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.98296480997594e-06!GO:0006606;protein import into nucleus;9.02276569872745e-06!GO:0000314;organellar small ribosomal subunit;9.43739022420496e-06!GO:0005763;mitochondrial small ribosomal subunit;9.43739022420496e-06!GO:0009109;coenzyme catabolic process;1.06894440496631e-05!GO:0051329;interphase of mitotic cell cycle;1.09306089888462e-05!GO:0005813;centrosome;1.09306089888462e-05!GO:0031252;leading edge;1.13601984681574e-05!GO:0030120;vesicle coat;1.26962437312963e-05!GO:0030662;coated vesicle membrane;1.26962437312963e-05!GO:0007017;microtubule-based process;1.28264060557089e-05!GO:0007059;chromosome segregation;1.31397935286081e-05!GO:0051187;cofactor catabolic process;1.5650710751073e-05!GO:0003924;GTPase activity;1.82728890322693e-05!GO:0008186;RNA-dependent ATPase activity;2.08210037274313e-05!GO:0045449;regulation of transcription;2.21382952076148e-05!GO:0005815;microtubule organizing center;3.51065372975115e-05!GO:0005525;GTP binding;3.51065372975115e-05!GO:0043069;negative regulation of programmed cell death;3.56779846904767e-05!GO:0003729;mRNA binding;3.71914051798603e-05!GO:0045454;cell redox homeostasis;3.87021045587039e-05!GO:0043066;negative regulation of apoptosis;4.14370642766615e-05!GO:0006613;cotranslational protein targeting to membrane;4.18681693082079e-05!GO:0000075;cell cycle checkpoint;4.44601436777562e-05!GO:0008654;phospholipid biosynthetic process;4.50159018628029e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;5.32925038278799e-05!GO:0005770;late endosome;6.61211968149746e-05!GO:0003678;DNA helicase activity;6.81487756813686e-05!GO:0008033;tRNA processing;6.90762545705258e-05!GO:0004004;ATP-dependent RNA helicase activity;6.96559653073461e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.00061156014208e-05!GO:0016363;nuclear matrix;7.60417200410823e-05!GO:0016564;transcription repressor activity;7.61572718078485e-05!GO:0003690;double-stranded DNA binding;7.86623295891089e-05!GO:0005788;endoplasmic reticulum lumen;8.5089581225069e-05!GO:0003677;DNA binding;8.59519298267351e-05!GO:0006302;double-strand break repair;8.77006654436591e-05!GO:0005769;early endosome;9.4921324332547e-05!GO:0051052;regulation of DNA metabolic process;0.000100459358865092!GO:0048471;perinuclear region of cytoplasm;0.000100459358865092!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000103613760912361!GO:0042802;identical protein binding;0.000109490366490565!GO:0016853;isomerase activity;0.000123197535991194!GO:0006355;regulation of transcription, DNA-dependent;0.000132797497669094!GO:0042981;regulation of apoptosis;0.000134646129432155!GO:0000776;kinetochore;0.000134646129432155!GO:0008092;cytoskeletal protein binding;0.000134936237540438!GO:0032508;DNA duplex unwinding;0.00014511356922257!GO:0032392;DNA geometric change;0.00014511356922257!GO:0044452;nucleolar part;0.000147306951899696!GO:0043681;protein import into mitochondrion;0.000155805245756685!GO:0065007;biological regulation;0.000165458493896111!GO:0043067;regulation of programmed cell death;0.000170040440052538!GO:0019899;enzyme binding;0.000184755514960191!GO:0007006;mitochondrial membrane organization and biogenesis;0.00019528602712774!GO:0006916;anti-apoptosis;0.000208087673698246!GO:0006402;mRNA catabolic process;0.000221449877279733!GO:0043021;ribonucleoprotein binding;0.000221667565600871!GO:0051427;hormone receptor binding;0.000234049283410737!GO:0048523;negative regulation of cellular process;0.00023484683865413!GO:0000059;protein import into nucleus, docking;0.000254877749705946!GO:0032561;guanyl ribonucleotide binding;0.00025850158131735!GO:0019001;guanyl nucleotide binding;0.00025850158131735!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000275806665107109!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000275930890973271!GO:0030880;RNA polymerase complex;0.000278835624090734!GO:0031324;negative regulation of cellular metabolic process;0.000293902935496892!GO:0030036;actin cytoskeleton organization and biogenesis;0.000295647699183664!GO:0003714;transcription corepressor activity;0.000306915512374838!GO:0044440;endosomal part;0.000313123470519177!GO:0010008;endosome membrane;0.000313123470519177!GO:0006612;protein targeting to membrane;0.00036431196121784!GO:0006818;hydrogen transport;0.000368642203833778!GO:0016787;hydrolase activity;0.000372214696351235!GO:0006268;DNA unwinding during replication;0.000374254000558126!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000379801824405906!GO:0005798;Golgi-associated vesicle;0.000393393511364578!GO:0006401;RNA catabolic process;0.000424016051199363!GO:0003682;chromatin binding;0.000441295225008309!GO:0035257;nuclear hormone receptor binding;0.00045010983873478!GO:0007088;regulation of mitosis;0.000450828794161962!GO:0000228;nuclear chromosome;0.00046616563612949!GO:0006520;amino acid metabolic process;0.000469831418845926!GO:0005839;proteasome core complex (sensu Eukaryota);0.000500671264717702!GO:0007264;small GTPase mediated signal transduction;0.000519605228305546!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000521730864768349!GO:0005684;U2-dependent spliceosome;0.000536067063535516!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000538028673382293!GO:0005637;nuclear inner membrane;0.000546116453802812!GO:0009165;nucleotide biosynthetic process;0.000547993046749474!GO:0015992;proton transport;0.000547993046749474!GO:0051087;chaperone binding;0.000588122040720886!GO:0006383;transcription from RNA polymerase III promoter;0.000638817543338865!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000643936715662536!GO:0000428;DNA-directed RNA polymerase complex;0.000643936715662536!GO:0008250;oligosaccharyl transferase complex;0.000647515136942905!GO:0006414;translational elongation;0.000650368772628487!GO:0030029;actin filament-based process;0.000652363888425375!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000683299914774032!GO:0004298;threonine endopeptidase activity;0.000683299914774032!GO:0006839;mitochondrial transport;0.000724360864768467!GO:0004576;oligosaccharyl transferase activity;0.00073187948396184!GO:0009892;negative regulation of metabolic process;0.000731923724791595!GO:0051920;peroxiredoxin activity;0.000754494426833764!GO:0033116;ER-Golgi intermediate compartment membrane;0.000778273969562575!GO:0001726;ruffle;0.000829405496704981!GO:0005885;Arp2/3 protein complex;0.000846291897806625!GO:0046474;glycerophospholipid biosynthetic process;0.000897809014831026!GO:0007052;mitotic spindle organization and biogenesis;0.000904225063900385!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000912431170000236!GO:0016741;transferase activity, transferring one-carbon groups;0.000934474455343154!GO:0015631;tubulin binding;0.000946184345587867!GO:0031072;heat shock protein binding;0.000990746453821941!GO:0008168;methyltransferase activity;0.00103712503376784!GO:0006626;protein targeting to mitochondrion;0.00111677405896113!GO:0004674;protein serine/threonine kinase activity;0.00112846937476976!GO:0015980;energy derivation by oxidation of organic compounds;0.00116792811747736!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00118361842511648!GO:0000049;tRNA binding;0.00118361842511648!GO:0022890;inorganic cation transmembrane transporter activity;0.00118723456179613!GO:0030867;rough endoplasmic reticulum membrane;0.00122288618619069!GO:0016251;general RNA polymerase II transcription factor activity;0.00128984186929679!GO:0007093;mitotic cell cycle checkpoint;0.00134303320302902!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00136651876690103!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00136651876690103!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00136651876690103!GO:0005669;transcription factor TFIID complex;0.00138447859138851!GO:0005773;vacuole;0.00139744451915316!GO:0048519;negative regulation of biological process;0.0014110537696743!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00143964480728557!GO:0048487;beta-tubulin binding;0.00150497036988323!GO:0006611;protein export from nucleus;0.00150779301830218!GO:0006275;regulation of DNA replication;0.00162003626353132!GO:0003713;transcription coactivator activity;0.0017231064773672!GO:0051789;response to protein stimulus;0.00179864197029091!GO:0006986;response to unfolded protein;0.00179864197029091!GO:0006338;chromatin remodeling;0.00188023937138051!GO:0000725;recombinational repair;0.00188959920267849!GO:0000724;double-strand break repair via homologous recombination;0.00188959920267849!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00195430982766582!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00195430982766582!GO:0005048;signal sequence binding;0.00197130205719898!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00198493563727664!GO:0016563;transcription activator activity;0.00199053332194263!GO:0016126;sterol biosynthetic process;0.00207009046949009!GO:0006405;RNA export from nucleus;0.00212629963818982!GO:0003684;damaged DNA binding;0.00225312906630284!GO:0040029;regulation of gene expression, epigenetic;0.00226496784522042!GO:0004527;exonuclease activity;0.00232766212160058!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0023888381804151!GO:0044262;cellular carbohydrate metabolic process;0.00257678373642739!GO:0044454;nuclear chromosome part;0.00260122489589922!GO:0006310;DNA recombination;0.00262178289508667!GO:0006541;glutamine metabolic process;0.00272137209793279!GO:0043414;biopolymer methylation;0.00272506656808318!GO:0005905;coated pit;0.00276439830537359!GO:0000792;heterochromatin;0.0027829547263273!GO:0006352;transcription initiation;0.00279049588776628!GO:0046467;membrane lipid biosynthetic process;0.00285336555843218!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00292553695583743!GO:0006284;base-excision repair;0.00296164649090223!GO:0005791;rough endoplasmic reticulum;0.00306537898346849!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00319134287297487!GO:0045786;negative regulation of progression through cell cycle;0.00355307624217716!GO:0006144;purine base metabolic process;0.00360419327569698!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00362773058889804!GO:0015399;primary active transmembrane transporter activity;0.00362773058889804!GO:0008652;amino acid biosynthetic process;0.00367165984017433!GO:0031968;organelle outer membrane;0.00368054518299956!GO:0030118;clathrin coat;0.00374892498116974!GO:0009112;nucleobase metabolic process;0.00376500995653598!GO:0019867;outer membrane;0.00380713264755352!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00385979178760057!GO:0008270;zinc ion binding;0.00390732451470172!GO:0018196;peptidyl-asparagine modification;0.0043083890698221!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0043083890698221!GO:0031124;mRNA 3'-end processing;0.00444685096381595!GO:0000786;nucleosome;0.0044886780025304!GO:0008139;nuclear localization sequence binding;0.0045029644633409!GO:0016859;cis-trans isomerase activity;0.00458270466370448!GO:0032259;methylation;0.00460652285840447!GO:0004003;ATP-dependent DNA helicase activity;0.00471111969973829!GO:0000096;sulfur amino acid metabolic process;0.00483084798601963!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00493374967255957!GO:0051252;regulation of RNA metabolic process;0.00493374967255957!GO:0030134;ER to Golgi transport vesicle;0.0049400393370149!GO:0005741;mitochondrial outer membrane;0.00503651389370544!GO:0003746;translation elongation factor activity;0.00518912710997142!GO:0030433;ER-associated protein catabolic process;0.00564438542228744!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00564438542228744!GO:0000793;condensed chromosome;0.00565376623966904!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0058375033254849!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00588255692748125!GO:0030027;lamellipodium;0.00590957595644819!GO:0051053;negative regulation of DNA metabolic process;0.00609993543817534!GO:0006730;one-carbon compound metabolic process;0.0063926425419768!GO:0016272;prefoldin complex;0.00646352970926191!GO:0043022;ribosome binding;0.00655312193670587!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0069326210361932!GO:0015002;heme-copper terminal oxidase activity;0.0069326210361932!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0069326210361932!GO:0004129;cytochrome-c oxidase activity;0.0069326210361932!GO:0030658;transport vesicle membrane;0.00705357838229477!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00705357838229477!GO:0043596;nuclear replication fork;0.00741740113287664!GO:0000339;RNA cap binding;0.00744809755110823!GO:0030119;AP-type membrane coat adaptor complex;0.00779187449139731!GO:0016481;negative regulation of transcription;0.00779187449139731!GO:0048500;signal recognition particle;0.00791393444947245!GO:0007021;tubulin folding;0.00806625601631788!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00807793824363633!GO:0005876;spindle microtubule;0.00826738163481762!GO:0030133;transport vesicle;0.00838287870784747!GO:0006270;DNA replication initiation;0.00858122141351301!GO:0006650;glycerophospholipid metabolic process;0.00873561724148698!GO:0030127;COPII vesicle coat;0.00882081971717286!GO:0012507;ER to Golgi transport vesicle membrane;0.00882081971717286!GO:0006695;cholesterol biosynthetic process;0.00909067110403307!GO:0030176;integral to endoplasmic reticulum membrane;0.00918722306415308!GO:0051656;establishment of organelle localization;0.00919311791965432!GO:0006376;mRNA splice site selection;0.00936025876310722!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00936025876310722!GO:0006007;glucose catabolic process;0.00937192080460006!GO:0016044;membrane organization and biogenesis;0.00942610256100237!GO:0006595;polyamine metabolic process;0.00953556604441794!GO:0000178;exosome (RNase complex);0.0100096512558686!GO:0019843;rRNA binding;0.0101548143056569!GO:0005832;chaperonin-containing T-complex;0.0102056471361325!GO:0000922;spindle pole;0.0102056471361325!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0103027680431614!GO:0019783;small conjugating protein-specific protease activity;0.0105754368298113!GO:0030131;clathrin adaptor complex;0.0111114065461189!GO:0035258;steroid hormone receptor binding;0.01133910559129!GO:0008610;lipid biosynthetic process;0.0114720531640954!GO:0003756;protein disulfide isomerase activity;0.0116556813980905!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0116556813980905!GO:0003711;transcription elongation regulator activity;0.0118175165805084!GO:0016791;phosphoric monoester hydrolase activity;0.0119835231333077!GO:0045947;negative regulation of translational initiation;0.0120708716049528!GO:0000323;lytic vacuole;0.0124634777798784!GO:0005764;lysosome;0.0124634777798784!GO:0030132;clathrin coat of coated pit;0.0124674105654632!GO:0009116;nucleoside metabolic process;0.0125385474162537!GO:0032200;telomere organization and biogenesis;0.0127721736571994!GO:0000723;telomere maintenance;0.0127721736571994!GO:0016584;nucleosome positioning;0.0129282223685566!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0131604263806184!GO:0006519;amino acid and derivative metabolic process;0.013295775665061!GO:0005758;mitochondrial intermembrane space;0.0135679757773065!GO:0004532;exoribonuclease activity;0.0135679757773065!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0135679757773065!GO:0045045;secretory pathway;0.0136286203533889!GO:0006417;regulation of translation;0.0139980141958043!GO:0000082;G1/S transition of mitotic cell cycle;0.0140631737996722!GO:0030660;Golgi-associated vesicle membrane;0.0140683355503199!GO:0008312;7S RNA binding;0.0145170378312412!GO:0050178;phenylpyruvate tautomerase activity;0.0145535249661409!GO:0006984;ER-nuclear signaling pathway;0.0149197425737835!GO:0000097;sulfur amino acid biosynthetic process;0.015057269977733!GO:0031123;RNA 3'-end processing;0.0153505240861862!GO:0051287;NAD binding;0.01567664780726!GO:0019318;hexose metabolic process;0.0158250436712893!GO:0046483;heterocycle metabolic process;0.0162923502892326!GO:0004843;ubiquitin-specific protease activity;0.0167240874152275!GO:0009451;RNA modification;0.0167350405496106!GO:0008180;signalosome;0.0167368700707049!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0168791900452259!GO:0008156;negative regulation of DNA replication;0.0169742023580153!GO:0030031;cell projection biogenesis;0.0170109798008189!GO:0042393;histone binding;0.0171415524601383!GO:0046489;phosphoinositide biosynthetic process;0.017589253460117!GO:0006733;oxidoreduction coenzyme metabolic process;0.0176722000785603!GO:0016301;kinase activity;0.017773087425189!GO:0008629;induction of apoptosis by intracellular signals;0.0180752939647521!GO:0031901;early endosome membrane;0.0181945843281224!GO:0030663;COPI coated vesicle membrane;0.0181945843281224!GO:0030126;COPI vesicle coat;0.0181945843281224!GO:0016197;endosome transport;0.0181982522631332!GO:0005996;monosaccharide metabolic process;0.0182590849917458!GO:0043488;regulation of mRNA stability;0.0186180576144822!GO:0043487;regulation of RNA stability;0.0186180576144822!GO:0001725;stress fiber;0.0186809028674914!GO:0032432;actin filament bundle;0.0186809028674914!GO:0005774;vacuolar membrane;0.0188265389926538!GO:0008632;apoptotic program;0.0189000763617744!GO:0042770;DNA damage response, signal transduction;0.0190705244774383!GO:0000790;nuclear chromatin;0.0192224025786938!GO:0030659;cytoplasmic vesicle membrane;0.019234575215858!GO:0006378;mRNA polyadenylation;0.0193885398604363!GO:0065009;regulation of a molecular function;0.0196522991670705!GO:0044433;cytoplasmic vesicle part;0.0199622644561619!GO:0006607;NLS-bearing substrate import into nucleus;0.0203959124802081!GO:0006306;DNA methylation;0.0205939315727346!GO:0006305;DNA alkylation;0.0205939315727346!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0205970005476852!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0208488338943046!GO:0045047;protein targeting to ER;0.0208488338943046!GO:0000209;protein polyubiquitination;0.0209952635771859!GO:0045892;negative regulation of transcription, DNA-dependent;0.0210942022390665!GO:0043492;ATPase activity, coupled to movement of substances;0.0211006292353336!GO:0012506;vesicle membrane;0.021761233958427!GO:0030521;androgen receptor signaling pathway;0.0222630554120569!GO:0019752;carboxylic acid metabolic process;0.0223798814325863!GO:0001701;in utero embryonic development;0.0225667771088744!GO:0006790;sulfur metabolic process;0.0226924501479896!GO:0005862;muscle thin filament tropomyosin;0.0229992787808797!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0233349104178662!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0243235663549077!GO:0051128;regulation of cellular component organization and biogenesis;0.0248159149084171!GO:0008287;protein serine/threonine phosphatase complex;0.0248776383977954!GO:0016311;dephosphorylation;0.0248776383977954!GO:0046983;protein dimerization activity;0.0248776383977954!GO:0004518;nuclease activity;0.0250196149361908!GO:0005652;nuclear lamina;0.0251017843085164!GO:0000152;nuclear ubiquitin ligase complex;0.0252564527297885!GO:0006082;organic acid metabolic process;0.0252751992793747!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.025452285114593!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0257308924460473!GO:0045039;protein import into mitochondrial inner membrane;0.0257308924460473!GO:0046426;negative regulation of JAK-STAT cascade;0.0264869732044746!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.026556554517304!GO:0000819;sister chromatid segregation;0.0272325777302166!GO:0031570;DNA integrity checkpoint;0.0272893901206122!GO:0031577;spindle checkpoint;0.0274322773656027!GO:0031970;organelle envelope lumen;0.0276324207236123!GO:0007040;lysosome organization and biogenesis;0.0278962104452825!GO:0006643;membrane lipid metabolic process;0.0279747894479185!GO:0030496;midbody;0.0281865511238608!GO:0008536;Ran GTPase binding;0.0282746006263605!GO:0008017;microtubule binding;0.0286999651426311!GO:0005784;translocon complex;0.0298485508394797!GO:0006767;water-soluble vitamin metabolic process;0.0303566076432538!GO:0006891;intra-Golgi vesicle-mediated transport;0.0303594584413978!GO:0005663;DNA replication factor C complex;0.0308318900550399!GO:0051101;regulation of DNA binding;0.0322722912385966!GO:0050811;GABA receptor binding;0.0322722912385966!GO:0004221;ubiquitin thiolesterase activity;0.0324982170345942!GO:0043601;nuclear replisome;0.0327448741739316!GO:0030894;replisome;0.0327448741739316!GO:0006304;DNA modification;0.0331475493131714!GO:0008408;3'-5' exonuclease activity;0.033666025900113!GO:0000070;mitotic sister chromatid segregation;0.0346023175667033!GO:0000910;cytokinesis;0.0353602819117284!GO:0051539;4 iron, 4 sulfur cluster binding;0.03561571061436!GO:0019904;protein domain specific binding;0.0360342812284975!GO:0006301;postreplication repair;0.0363042576245144!GO:0046870;cadmium ion binding;0.0365704097952782!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0368095112028366!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0368095112028366!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0369156183870626!GO:0050662;coenzyme binding;0.0370876203931092!GO:0031529;ruffle organization and biogenesis;0.0371630213742509!GO:0006096;glycolysis;0.0374308913478705!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0374308913478705!GO:0010257;NADH dehydrogenase complex assembly;0.0374308913478705!GO:0033108;mitochondrial respiratory chain complex assembly;0.0374308913478705!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0378118082283085!GO:0030032;lamellipodium biogenesis;0.0383828514747007!GO:0017166;vinculin binding;0.0385594123403074!GO:0031625;ubiquitin protein ligase binding;0.039343991799524!GO:0005856;cytoskeleton;0.039343991799524!GO:0008361;regulation of cell size;0.0394853564372481!GO:0004448;isocitrate dehydrogenase activity;0.0395405487564318!GO:0008022;protein C-terminus binding;0.0396022455640303!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.040951525676306!GO:0006091;generation of precursor metabolites and energy;0.0413935606427667!GO:0046365;monosaccharide catabolic process;0.0413935606427667!GO:0006740;NADPH regeneration;0.0416424532171103!GO:0006098;pentose-phosphate shunt;0.0416424532171103!GO:0043624;cellular protein complex disassembly;0.0420554354522416!GO:0035267;NuA4 histone acetyltransferase complex;0.0420554354522416!GO:0030384;phosphoinositide metabolic process;0.0422737343082418!GO:0006400;tRNA modification;0.0426554536792881!GO:0000086;G2/M transition of mitotic cell cycle;0.0428495369279352!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.042928421114244!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0429752721855371!GO:0019362;pyridine nucleotide metabolic process;0.0429816548774107!GO:0006509;membrane protein ectodomain proteolysis;0.0429879481882387!GO:0033619;membrane protein proteolysis;0.0429879481882387!GO:0051348;negative regulation of transferase activity;0.0434810205922108!GO:0000123;histone acetyltransferase complex;0.0442743725210292!GO:0008097;5S rRNA binding;0.0443455155343995!GO:0030137;COPI-coated vesicle;0.045091526524006!GO:0008637;apoptotic mitochondrial changes;0.045091526524006!GO:0009308;amine metabolic process;0.0455694906791526!GO:0031371;ubiquitin conjugating enzyme complex;0.045625458241037!GO:0009113;purine base biosynthetic process;0.0458432817722435!GO:0016417;S-acyltransferase activity;0.0458432817722435!GO:0016790;thiolester hydrolase activity;0.0460489200699217!GO:0008143;poly(A) binding;0.0470156419666196!GO:0006516;glycoprotein catabolic process;0.0474200041976455!GO:0030911;TPR domain binding;0.0475712508079026!GO:0006289;nucleotide-excision repair;0.0475787042129552!GO:0005938;cell cortex;0.047893745192659!GO:0044437;vacuolar part;0.0482985479572617!GO:0008276;protein methyltransferase activity;0.0482985479572617!GO:0006672;ceramide metabolic process;0.0483293821924112!GO:0006644;phospholipid metabolic process;0.0483779153995992!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0485177120533827!GO:0007033;vacuole organization and biogenesis;0.0485655086260162!GO:0003702;RNA polymerase II transcription factor activity;0.0486228935209058!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0486228935209058!GO:0046813;virion attachment, binding of host cell surface receptor;0.0486228935209058!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0486228935209058!GO:0006563;L-serine metabolic process;0.0488794666579856!GO:0033559;unsaturated fatty acid metabolic process;0.0491749802599822!GO:0006636;unsaturated fatty acid biosynthetic process;0.0491749802599822!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0493050434516549!GO:0030518;steroid hormone receptor signaling pathway;0.0493666713282471!GO:0009303;rRNA transcription;0.0494706047070918
|sample_id=10786
|sample_id=10786
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=testis
|sample_tissue=testis
|top_motifs=OCT4_SOX2{dimer}:4.08901325988;TOPORS:2.74673017497;PITX1..3:2.46991706517;XCPE1{core}:1.6318108417;SNAI1..3:1.47812428263;SP1:1.33275462895;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.32195963567;NFY{A,B,C}:1.24202989944;ZEB1:1.15767912786;E2F1..5:1.14513840929;MTF1:1.09591821802;NKX2-3_NKX2-5:1.05377550659;CUX2:1.03553129018;SOX{8,9,10}:1.01985931506;VSX1,2:0.994657678989;TFDP1:0.957494910543;CRX:0.928400451217;SOX2:0.913074821485;RORA:0.902638655452;ONECUT1,2:0.845151028665;HIF1A:0.842315049308;AIRE:0.838879897177;MYOD1:0.79736904463;STAT1,3:0.771259941632;ATF4:0.751878712566;STAT5{A,B}:0.747846234965;ZNF143:0.725412776606;ELK1,4_GABP{A,B1}:0.688246015062;bHLH_family:0.669039493457;FOXP1:0.666944178646;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.653725114391;LEF1_TCF7_TCF7L1,2:0.653537781658;EBF1:0.641424347647;MAZ:0.626398008127;POU2F1..3:0.579211487673;POU5F1:0.566922732869;TFAP2B:0.54411499424;IKZF2:0.511280953256;LMO2:0.495943267835;GFI1:0.48221077496;SOX17:0.474356559652;PBX1:0.46045479573;TEAD1:0.443685573612;ALX1:0.442604213689;PATZ1:0.442566886894;ZNF384:0.441061589097;EVI1:0.433013631779;HOX{A5,B5}:0.429439391201;FOXQ1:0.425970052973;CDC5L:0.410911275695;NRF1:0.39733424794;SREBF1,2:0.3569905769;ESRRA:0.347867552714;NR5A1,2:0.335321133681;CDX1,2,4:0.334450871119;LHX3,4:0.279829119046;MYB:0.268832477795;NANOG:0.26510094533;ZIC1..3:0.261801217129;RBPJ:0.169063275093;GZF1:0.160109934027;TBX4,5:0.151054141344;CREB1:0.140698508786;PAX2:0.132467596548;FOXD3:0.131043699488;BREu{core}:0.115547451134;KLF4:0.113453282035;TBP:0.111638067236;TFAP2{A,C}:0.110776670746;TP53:0.107073593654;HNF4A_NR2F1,2:0.0964173395784;ZBTB16:0.0906797818058;PAX1,9:0.0659924136807;YY1:0.051211134208;TEF:0.02424256703;GATA4:0.0063719256066;IKZF1:-0.00611771466339;T:-0.0295406643001;GATA6:-0.0376542552952;ZFP161:-0.0620527518001;ZBTB6:-0.0825768839497;FOXM1:-0.0904766104449;NFE2L2:-0.0993294699199;FOXN1:-0.122579848564;ADNP_IRX_SIX_ZHX:-0.154819719374;FOX{F1,F2,J1}:-0.172413124724;MZF1:-0.173824927734;POU1F1:-0.177714067732;PPARG:-0.177874901597;FOXO1,3,4:-0.178005247314;ATF2:-0.178124742229;MYBL2:-0.189162809251;HNF1A:-0.190199159867;ATF5_CREB3:-0.190714085535;FOXA2:-0.211291807367;GTF2I:-0.221050995825;REST:-0.230929673629;UFEwm:-0.235555119789;NR6A1:-0.241627881549;SRF:-0.242301446978;EN1,2:-0.258158989699;HOX{A4,D4}:-0.27237860943;PRRX1,2:-0.276099212446;TFAP4:-0.285230038208;PAX8:-0.299344752577;FOS_FOS{B,L1}_JUN{B,D}:-0.302282351791;ZNF148:-0.308020144724;HAND1,2:-0.321329737922;BACH2:-0.332494245273;FOXL1:-0.334055267071;GCM1,2:-0.34257696577;GFI1B:-0.349239425699;EGR1..3:-0.366806036611;NFE2:-0.377390440705;FOX{I1,J2}:-0.382573072046;RREB1:-0.383323915952;ZNF423:-0.388239756559;SPZ1:-0.389156621568;POU3F1..4:-0.390874404266;HIC1:-0.408643523989;HOX{A6,A7,B6,B7}:-0.413266238891;MYFfamily:-0.445696575443;NFKB1_REL_RELA:-0.450120575037;ARID5B:-0.464841783202;NFE2L1:-0.467706934291;FOSL2:-0.475619812774;NKX2-1,4:-0.498317279455;CEBPA,B_DDIT3:-0.506759804437;MED-1{core}:-0.508329765679;TFCP2:-0.538380624966;SPI1:-0.545232042978;NANOG{mouse}:-0.564042125379;TLX2:-0.564196908412;FOX{D1,D2}:-0.569607206775;SOX5:-0.575936480827;MTE{core}:-0.580229115618;HSF1,2:-0.589972767965;PRDM1:-0.596450205878;HLF:-0.605218234584;XBP1:-0.622176506704;NHLH1,2:-0.657627639327;SPIB:-0.663737295476;ETS1,2:-0.691332039514;MEF2{A,B,C,D}:-0.695900212681;JUN:-0.721216318965;ATF6:-0.770597860093;PAX5:-0.813858132219;PDX1:-0.817892866303;PAX4:-0.835465106934;RUNX1..3:-0.837889869714;GTF2A1,2:-0.854103393985;RFX1:-0.892803779833;NR1H4:-0.901292931074;ELF1,2,4:-0.902245814212;POU6F1:-0.902314150408;NKX6-1,2:-0.925820676016;AR:-0.934459646668;RXR{A,B,G}:-0.935859893;NKX3-2:-0.94226273675;MAFB:-0.955490620888;DMAP1_NCOR{1,2}_SMARC:-0.978231347372;HMGA1,2:-0.983333550455;NFIX:-0.985301915242;ESR1:-0.997358336693;ZNF238:-1.00843042941;RFX2..5_RFXANK_RFXAP:-1.01057091741;TLX1..3_NFIC{dimer}:-1.02061124986;TGIF1:-1.02462510493;FOXP3:-1.03476225537;HOXA9_MEIS1:-1.04356897611;NR3C1:-1.07611313696;NFIL3:-1.08336800698;HES1:-1.08432838226;IRF7:-1.10435283413;AHR_ARNT_ARNT2:-1.14600521959;TAL1_TCF{3,4,12}:-1.20099105639;EP300:-1.20330568492;NFATC1..3:-1.24749797507;HMX1:-1.28482176142;BPTF:-1.34519526294;PAX6:-1.35412111025;ALX4:-1.3577427645;PAX3,7:-1.39974909163;NKX3-1:-1.40092543556;NKX2-2,8:-1.40491091647;IRF1,2:-1.40569341199;STAT2,4,6:-1.52984977573;HBP1_HMGB_SSRP1_UBTF:-1.55300863557;DBP:-1.55652963533;GLI1..3:-1.67394527985;RXRA_VDR{dimer}:-1.87221839751;SMAD1..7,9:-2.15354557404
|top_motifs=OCT4_SOX2{dimer}:4.08901325988;TOPORS:2.74673017497;PITX1..3:2.46991706517;XCPE1{core}:1.6318108417;SNAI1..3:1.47812428263;SP1:1.33275462895;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.32195963567;NFY{A,B,C}:1.24202989944;ZEB1:1.15767912786;E2F1..5:1.14513840929;MTF1:1.09591821802;NKX2-3_NKX2-5:1.05377550659;CUX2:1.03553129018;SOX{8,9,10}:1.01985931506;VSX1,2:0.994657678989;TFDP1:0.957494910543;CRX:0.928400451217;SOX2:0.913074821485;RORA:0.902638655452;ONECUT1,2:0.845151028665;HIF1A:0.842315049308;AIRE:0.838879897177;MYOD1:0.79736904463;STAT1,3:0.771259941632;ATF4:0.751878712566;STAT5{A,B}:0.747846234965;ZNF143:0.725412776606;ELK1,4_GABP{A,B1}:0.688246015062;bHLH_family:0.669039493457;FOXP1:0.666944178646;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.653725114391;LEF1_TCF7_TCF7L1,2:0.653537781658;EBF1:0.641424347647;MAZ:0.626398008127;POU2F1..3:0.579211487673;POU5F1:0.566922732869;TFAP2B:0.54411499424;IKZF2:0.511280953256;LMO2:0.495943267835;GFI1:0.48221077496;SOX17:0.474356559652;PBX1:0.46045479573;TEAD1:0.443685573612;ALX1:0.442604213689;PATZ1:0.442566886894;ZNF384:0.441061589097;EVI1:0.433013631779;HOX{A5,B5}:0.429439391201;FOXQ1:0.425970052973;CDC5L:0.410911275695;NRF1:0.39733424794;SREBF1,2:0.3569905769;ESRRA:0.347867552714;NR5A1,2:0.335321133681;CDX1,2,4:0.334450871119;LHX3,4:0.279829119046;MYB:0.268832477795;NANOG:0.26510094533;ZIC1..3:0.261801217129;RBPJ:0.169063275093;GZF1:0.160109934027;TBX4,5:0.151054141344;CREB1:0.140698508786;PAX2:0.132467596548;FOXD3:0.131043699488;BREu{core}:0.115547451134;KLF4:0.113453282035;TBP:0.111638067236;TFAP2{A,C}:0.110776670746;TP53:0.107073593654;HNF4A_NR2F1,2:0.0964173395784;ZBTB16:0.0906797818058;PAX1,9:0.0659924136807;YY1:0.051211134208;TEF:0.02424256703;GATA4:0.0063719256066;IKZF1:-0.00611771466339;T:-0.0295406643001;GATA6:-0.0376542552952;ZFP161:-0.0620527518001;ZBTB6:-0.0825768839497;FOXM1:-0.0904766104449;NFE2L2:-0.0993294699199;FOXN1:-0.122579848564;ADNP_IRX_SIX_ZHX:-0.154819719374;FOX{F1,F2,J1}:-0.172413124724;MZF1:-0.173824927734;POU1F1:-0.177714067732;PPARG:-0.177874901597;FOXO1,3,4:-0.178005247314;ATF2:-0.178124742229;MYBL2:-0.189162809251;HNF1A:-0.190199159867;ATF5_CREB3:-0.190714085535;FOXA2:-0.211291807367;GTF2I:-0.221050995825;REST:-0.230929673629;UFEwm:-0.235555119789;NR6A1:-0.241627881549;SRF:-0.242301446978;EN1,2:-0.258158989699;HOX{A4,D4}:-0.27237860943;PRRX1,2:-0.276099212446;TFAP4:-0.285230038208;PAX8:-0.299344752577;FOS_FOS{B,L1}_JUN{B,D}:-0.302282351791;ZNF148:-0.308020144724;HAND1,2:-0.321329737922;BACH2:-0.332494245273;FOXL1:-0.334055267071;GCM1,2:-0.34257696577;GFI1B:-0.349239425699;EGR1..3:-0.366806036611;NFE2:-0.377390440705;FOX{I1,J2}:-0.382573072046;RREB1:-0.383323915952;ZNF423:-0.388239756559;SPZ1:-0.389156621568;POU3F1..4:-0.390874404266;HIC1:-0.408643523989;HOX{A6,A7,B6,B7}:-0.413266238891;MYFfamily:-0.445696575443;NFKB1_REL_RELA:-0.450120575037;ARID5B:-0.464841783202;NFE2L1:-0.467706934291;FOSL2:-0.475619812774;NKX2-1,4:-0.498317279455;CEBPA,B_DDIT3:-0.506759804437;MED-1{core}:-0.508329765679;TFCP2:-0.538380624966;SPI1:-0.545232042978;NANOG{mouse}:-0.564042125379;TLX2:-0.564196908412;FOX{D1,D2}:-0.569607206775;SOX5:-0.575936480827;MTE{core}:-0.580229115618;HSF1,2:-0.589972767965;PRDM1:-0.596450205878;HLF:-0.605218234584;XBP1:-0.622176506704;NHLH1,2:-0.657627639327;SPIB:-0.663737295476;ETS1,2:-0.691332039514;MEF2{A,B,C,D}:-0.695900212681;JUN:-0.721216318965;ATF6:-0.770597860093;PAX5:-0.813858132219;PDX1:-0.817892866303;PAX4:-0.835465106934;RUNX1..3:-0.837889869714;GTF2A1,2:-0.854103393985;RFX1:-0.892803779833;NR1H4:-0.901292931074;ELF1,2,4:-0.902245814212;POU6F1:-0.902314150408;NKX6-1,2:-0.925820676016;AR:-0.934459646668;RXR{A,B,G}:-0.935859893;NKX3-2:-0.94226273675;MAFB:-0.955490620888;DMAP1_NCOR{1,2}_SMARC:-0.978231347372;HMGA1,2:-0.983333550455;NFIX:-0.985301915242;ESR1:-0.997358336693;ZNF238:-1.00843042941;RFX2..5_RFXANK_RFXAP:-1.01057091741;TLX1..3_NFIC{dimer}:-1.02061124986;TGIF1:-1.02462510493;FOXP3:-1.03476225537;HOXA9_MEIS1:-1.04356897611;NR3C1:-1.07611313696;NFIL3:-1.08336800698;HES1:-1.08432838226;IRF7:-1.10435283413;AHR_ARNT_ARNT2:-1.14600521959;TAL1_TCF{3,4,12}:-1.20099105639;EP300:-1.20330568492;NFATC1..3:-1.24749797507;HMX1:-1.28482176142;BPTF:-1.34519526294;PAX6:-1.35412111025;ALX4:-1.3577427645;PAX3,7:-1.39974909163;NKX3-1:-1.40092543556;NKX2-2,8:-1.40491091647;IRF1,2:-1.40569341199;STAT2,4,6:-1.52984977573;HBP1_HMGB_SSRP1_UBTF:-1.55300863557;DBP:-1.55652963533;GLI1..3:-1.67394527985;RXRA_VDR{dimer}:-1.87221839751;SMAD1..7,9:-2.15354557404
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10786-110H3;search_select_hide=table117:FF:10786-110H3
}}
}}

Latest revision as of 15:04, 3 June 2020

Name:testicular germ cell embryonal carcinoma cell line:ITO-II
Species:Human (Homo sapiens)
Library ID:CNhs11876
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuetestis
dev stageNA
sexmale
ageunknown
cell typeunclassifiable
cell lineITO-II
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004689
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11876 CAGE DRX008022 DRR008894
Accession ID Hg19

Library idBAMCTSS
CNhs11876 DRZ000319 DRZ001704
Accession ID Hg38

Library idBAMCTSS
CNhs11876 DRZ011669 DRZ013054
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0696
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.46
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0.674
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0.116
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.00291
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0.366
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0515
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0963
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0.747
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.132
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.156
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.243
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0422
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0.116
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.18
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.0422
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0102
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0.0422
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth2.024476e-4
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.534
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0806
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0422
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0.327
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0.453
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11876

Jaspar motifP-value
MA0002.20.00213
MA0003.10.808
MA0004.10.484
MA0006.10.126
MA0007.10.983
MA0009.10.76
MA0014.10.0752
MA0017.10.52
MA0018.20.0569
MA0019.10.218
MA0024.12.75422e-5
MA0025.10.299
MA0027.10.654
MA0028.10.0133
MA0029.10.55
MA0030.10.423
MA0031.10.291
MA0035.20.733
MA0038.10.0121
MA0039.20.00455
MA0040.10.695
MA0041.10.214
MA0042.10.485
MA0043.10.307
MA0046.10.935
MA0047.20.0854
MA0048.10.247
MA0050.11.25435e-8
MA0051.12.59534e-5
MA0052.10.0672
MA0055.10.0199
MA0057.10.907
MA0058.10.421
MA0059.10.841
MA0060.11.40345e-9
MA0061.13.84809e-4
MA0062.20.112
MA0065.20.442
MA0066.10.839
MA0067.10.368
MA0068.10.0148
MA0069.10.433
MA0070.10.835
MA0071.10.426
MA0072.10.824
MA0073.10.912
MA0074.10.175
MA0076.10.0478
MA0077.10.0902
MA0078.10.734
MA0079.20.385
MA0080.25.48466e-9
MA0081.10.0309
MA0083.10.364
MA0084.10.271
MA0087.10.866
MA0088.10.885
MA0090.10.264
MA0091.10.00635
MA0092.10.0497
MA0093.10.339
MA0099.23.48538e-5
MA0100.10.944
MA0101.10.0385
MA0102.20.0261
MA0103.13.31904e-4
MA0104.20.639
MA0105.14.41233e-6
MA0106.10.978
MA0107.10.00578
MA0108.29.24011e-5
MA0111.10.6
MA0112.20.0285
MA0113.10.0603
MA0114.10.552
MA0115.10.0807
MA0116.19.73271e-4
MA0117.10.745
MA0119.10.00149
MA0122.10.822
MA0124.10.881
MA0125.10.123
MA0131.10.566
MA0135.10.732
MA0136.16.1217e-7
MA0137.20.361
MA0138.20.192
MA0139.10.16
MA0140.10.438
MA0141.10.947
MA0142.16.36608e-24
MA0143.11.09778e-8
MA0144.10.13
MA0145.10.711
MA0146.10.386
MA0147.10.845
MA0148.10.114
MA0149.10.756
MA0150.10.0241
MA0152.10.655
MA0153.10.841
MA0154.10.0254
MA0155.10.998
MA0156.10.0022
MA0157.10.153
MA0159.10.526
MA0160.10.954
MA0162.10.791
MA0163.10.00145
MA0164.10.747
MA0258.10.545
MA0259.10.778



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11876

Novel motifP-value
10.127
100.164
1000.501
1010.842
1020.225
1030.0113
1040.791
1050.334
1060.0783
1070.736
1080.469
1090.437
110.31
1100.128
1110.0432
1120.345
1130.101
1140.0252
1150.979
1160.83
1170.426
1180.596
1190.257
120.833
1200.318
1210.847
1220.988
1230.281
1240.101
1250.906
1260.616
1270.213
1280.667
1290.345
130.749
1300.765
1310.732
1320.499
1335.95488e-4
1340.168
1355.12793e-4
1360.0427
1370.451
1380.0534
1390.0889
140.909
1400.363
1410.575
1420.534
1430.00353
1440.52
1450.178
1460.311
1470.661
1480.0312
1490.00289
150.0895
1500.946
1510.0708
1520.347
1530.528
1540.805
1550.389
1560.0459
1570.749
1580.656
1590.339
160.335
1600.319
1610.242
1620.437
1630.515
1640.787
1650.693
1660.19
1670.361
1680.522
1690.209
170.72
180.55
190.0939
20.741
200.965
210.759
220.253
230.0312
240.556
250.645
260.662
270.616
280.808
290.504
30.0689
300.751
310.553
320.0121
330.887
340.712
350.246
360.599
370.417
380.59
390.509
40.85
400.755
410.301
420.403
430.0932
440.837
450.833
460.119
470.387
480.962
490.146
50.0814
500.488
510.972
520.87
530.402
540.809
550.109
560.993
570.861
580.0668
590.359
60.721
600.262
610.402
620.0249
630.243
640.538
650.191
660.571
670.733
680.277
690.34
70.899
700.0295
710.0355
720.519
730.695
740.0914
750.302
760.936
770.39
780.994
790.0528
80.116
800.0714
810.177
820.0776
830.0919
840.932
850.21
860.689
870.0212
880.149
890.112
90.107
900.26
910.202
920.129
930.314
940.465
950.509
960.0438
970.953
980.265
990.435



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11876


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)
0000039 (germ line cell)
0000586 (germ cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
3095 (germ cell and embryonal cancer)
305 (carcinoma)
2994 (germ cell cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000473 (testis)
0000991 (gonad)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0101560 (testicular cancer cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)

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