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{{f5samples
{{f5samples
|id=10810
|DRA_sample_Accession=CAGE@SAMD00005708
|name=adrenal cortex adenocarcinoma cell line:SW-13
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005708
|sample_id=FF:10810-111A9
|accession_numbers=CAGE;DRX007823;DRR008695;DRZ000120;DRZ001505;DRZ011470;DRZ012855
|rna_tube_id=111A9
|accession_numbers_RNASeq=RNA-Seq;DRX057145;DRR062904;DRZ007980
|rna_box=111
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002369,UBERON:0002100,UBERON:0001851,UBERON:0001235,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0005172,UBERON:0002530,UBERON:0006858,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0000916
|rna_position=A9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
|sample_cell_lot=
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:7,DOID:305,DOID:299
|sample_cell_catalog=jcrb9069
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100167
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|comment=
|rna_lot_number=
|created_by=
|rna_catalog_number=
|creation_date=
|sample_species=Human (Homo sapiens)
|data_phase=2
|sample_strain=
|datafreeze_phase=2
|sample_dev_stage=
|def=
|sample_tissue=adrenal gland
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chr19:21688387..21688432,+!p1@ZNF429!0.21!8.25!ZNF429;;chr6:143266297..143266356,-!p1@HIVEP2!0.21!6.31!HIVEP2;;chr19:21512144..21512191,-!p2@ZNF708!0.21!6.07!ZNF708;;chr19:53289995..53290050,-!p1@ZNF600!0.21!5.34!ZNF600;;chr19:9785724..9785740,-!p2@ZNF562!0.21!5.10!ZNF562;;chr12:104531854..104531893,-!p2@NFYB!0.21!4.61!NFYB;;chr19:58326267..58326292,-!p1@ZNF552!0.21!4.49!ZNF552;;chr8:144373550..144373617,+!p1@ZNF696!0.21!4.49!ZNF696;;chr1:23694794..23694863,-!p1@ZNF436!0.21!4.25!ZNF436;;chr7:74072135..74072171,+!p2@GTF2I!0.21!3.76!GTF2I;;chr5:178157609..178157650,-!p2@ZNF354A!0.21!3.28!ZNF354A;;chr2:178128250..178128293,-!p6@NFE2L2!0.21!2.91!NFE2L2;;chr7:102985288..102985310,-!p2@DNAJC2!0.21!2.67!DNAJC2;;chr7:99102267..99102304,+!p2@ZKSCAN5!0.21!2.67!ZKSCAN5;;chr12:80084167..80084197,-!p5@PAWR!0.21!2.67!PAWR;;chr19:58570605..58570655,+!p1@ZNF135!0.21!1.82!ZNF135;;chr1:59165763..59165780,-!p2@MYSM1!0.21!1.82!MYSM1;;chr12:6798523..6798548,-!p6@ZNF384!0.21!1.70!ZNF384;;chr6:28303901..28303944,-!p2@ZNF323!0.21!1.58!ZNF323;;chr5:178322893..178322931,+!p1@ZFP2!0.21!1.33!ZFP2;;chr10:94449649..94449664,+!p3@HHEX!0.21!1.33!HHEX;;chr12:56401175..56401225,+!p3@IKZF4!0.21!1.33!IKZF4;;chr19:20011731..20011743,+!p3@ZNF93!0.21!1.09!ZNF93;;chr20:52210338..52210352,-!p4@ZNF217!0.21!0.97!ZNF217;;chr19:19303794..19303805,+!p5@RFXANK!0.21!0.85!RFXANK;;chr15:37391614..37391626,-!p18@MEIS2!0.21!0.61!MEIS2;;chr17:46655578..46655589,-!p4@HOXB4!0.21!0.61!HOXB4;;chr17:46703240..46703257,-!p6@HOXB9!0.21!0.61!HOXB9;;chr17:48045917..48045977,+!p1@DLX4!0.21!0.61!DLX4;;chr18:55102628..55102646,+!p2@ONECUT2!0.21!0.61!ONECUT2;;chr19:38720356..38720369,-!p4@DPF1!0.21!0.61!DPF1;;chr19:50529307..50529323,+!p3@ZNF473!0.21!0.61!ZNF473;;chr1:3569101..3569115,+!p2@TP73!0.21!0.61!TP73;;chr1:3569135..3569150,+!p3@TP73!0.21!0.61!TP73;;chr1:8763394..8763399,-!p34@RERE!0.21!0.61!RERE;;chr20:2673369..2673382,+!p2@EBF4!0.21!0.61!EBF4;;chr6:21597499..21597513,+!p16@SOX4!0.21!0.61!SOX4;;chr7:21468134..21468143,+!p6@SP4!0.21!0.61!SP4;;chr8:144512897..144512903,-!p1@MAFA!0.21!0.61!MAFA;;chr8:30891078..30891128,-!p2@PURG!0.21!0.61!PURG;;chr2:176987441..176987454,+!p1@HOXD9!0.21!0.61!HOXD9;;chr2:176995011..176995029,+!p6@HOXD8!0.21!0.61!HOXD8;;chr2:200322259..200322280,-!p5@SATB2!0.21!0.61!SATB2;;chr3:181430496..181430506,+!p6@SOX2!0.21!0.61!SOX2;;chr3:25469815..25469866,+!p3@RARB!0.21!0.61!RARB;;chr10:102505312..102505320,+!p6@PAX2!0.21!0.61!PAX2;;chr11:31832610..31832639,-!p5@PAX6!0.21!0.61!PAX6;;chr11:64764402..64764413,-!p2@BATF2!0.21!0.61!BATF2;;chr11:8040739..8040815,+!p4@TUB!0.21!0.61!TUB;;chr12:54332608..54332636,+!p1@HOXC13!0.21!0.61!HOXC13;;chr12:54379477..54379498,+!p5@HOXC5!0.21!0.61!HOXC5;;chr13:100633726..100633749,+!p6@ZIC2!0.21!0.61!ZIC2;;chr14:33408057..33408068,+!p9@NPAS3!0.21!0.61!NPAS3;;chr14:45722418..45722426,-!p6@MIS18BP1!0.21!0.61!MIS18BP1;;chr9:14308004..14308041,-!p14@NFIB!0.21!0.61!NFIB;;chr9:14314946..14314983,-!p8@NFIB!0.21!0.61!NFIB;;chr19:6424813..6424835,-!p1@KHSRP!0.20!88.47!KHSRP;;chr19:56154958..56155027,+!p1@ZNF581!0.20!47.33!ZNF581;;chr19:58331088..58331106,+!p1@ZNF587!0.20!19.66!ZNF587;;chr6:155635583..155635644,-!p1@TFB1M!0.20!18.08!TFB1M;;chr7:44925044..44925156,-!p1@PURB!0.20!10.80!PURB;;chr19:58740266..58740297,+!p1@ZNF544!0.20!9.71!ZNF544;;chr6:33422343..33422394,+!p1@ZBTB9!0.20!8.86!ZBTB9;;chr16:3450963..3451019,-!p1@ZNF434!0.20!8.13!ZNF434;;chr19:52511437..52511490,-!p1@ZNF615!0.20!7.65!ZNF615;;chr15:57025759..57025811,-!p2@ZNF280D!0.20!6.67!ZNF280D;;chr17:41322281..41322328,-!p2@BRCA1!0.20!3.40!BRCA1;;chr19:37341160..37341194,-!p2@ZNF790!0.20!2.31!ZNF790;;chr1:249153114..249153175,-!p3@ZNF692!0.20!1.94!ZNF692;;chr12:52430894..52430952,+!p3@NR4A1!0.20!1.94!NR4A1;;chr3:178789622..178789633,-!p3@ZMAT3!0.20!1.94!ZMAT3;;
|sample_donor(cell lot)=
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316
|sample_sex=female
|sample_age=unknown
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=2.18
|rna_od260/280=2.05
|sample_cell_type=adrenal cortex cell
|sample_cell_line=SW-13
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=adenocarcinoma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=145.82925
|rna_concentration=1.94439
|sample_note=
|profile_hcage=CNhs11893,LSID830,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000480,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000926,UBERON:0000949,UBERON:0001062,UBERON:0001235,UBERON:0001851,UBERON:0002050,UBERON:0002100,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002369,UBERON:0002417,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0004120,UBERON:0004121,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005423,UBERON:0006598,UBERON:0007284
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:299,DOID:305,DOID:4,DOID:7
|sample_description=
|fonse_cell_line=FF:0101120
|fonse_cell_line=FF:0101120
|fonse_cell_line_closure=FF:0101120
|fonse_cell_line_closure=FF:0101120
Line 66: Line 42:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/adrenal%2520cortex%2520adenocarcinoma%2520cell%2520line%253aSW-13.CNhs11893.10810-111A9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/adrenal%2520cortex%2520adenocarcinoma%2520cell%2520line%253aSW-13.CNhs11893.10810-111A9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/adrenal%2520cortex%2520adenocarcinoma%2520cell%2520line%253aSW-13.CNhs11893.10810-111A9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/adrenal%2520cortex%2520adenocarcinoma%2520cell%2520line%253aSW-13.CNhs11893.10810-111A9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/adrenal%2520cortex%2520adenocarcinoma%2520cell%2520line%253aSW-13.CNhs11893.10810-111A9.hg38.nobarcode.ctss.bed.gz
|id=FF:10810-111A9
|is_a=DOID:7;;EFO:0002091;;FF:0000210;;FF:0100167;;UBERON:0001235
|is_obsolete=
|library_id=CNhs11893
|library_id_phase_based=2:CNhs11893
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10810
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10810
|name=adrenal cortex adenocarcinoma cell line:SW-13
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11893,LSID830,release010,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0456444980788945,0,0.136396846467536,-7.4582782204957e-05,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.103577747945808,0,0.0248726312013101,0,0,0,0.13962683917274,0,0,0.0388991348310618,0,0,0,0,0,0,0,0,0,0,0,0,-0.0656317483601882,0.0806082056284404,0,0,0,0,0,0,0,0.00065761008847572,0,0,0,0,0,0.00815791425380266,0.134840339732678,0.0378479784900733,0,0,-0.00296997473024245,0,0,0,0,0,0,0,0,0.134840339732678,0,0,0,0,0,0,0,0,0,0,0,0,0.0094346331488722,0,0,-0.0932245680545911,0,0,0,0.00158661046145814,0.218832609774632,0,0,0,0,-0.0980353512377064,0.195920415033317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.071500962721151,0.0943736524828545,0,0,-0.00905928230713096,-0.216298547222791,0,0,0.0497452624026201,0,0,0
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|rna_box=111
|rna_catalog_number=
|rna_concentration=1.94439
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.18
|rna_od260/280=2.05
|rna_position=A9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=111A9
|rna_weight_ug=145.82925
|rnaseq_library_id=RDhi10088
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=jcrb9069
|sample_cell_line=SW-13
|sample_cell_lot=
|sample_cell_type=adrenal cortex cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|sample_description=
|sample_dev_stage=
|sample_disease=adenocarcinoma
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.72350304873894e-284!GO:0043231;intracellular membrane-bound organelle;1.21603043554772e-255!GO:0043227;membrane-bound organelle;2.5192603729145e-255!GO:0043226;organelle;1.99928635516904e-251!GO:0043229;intracellular organelle;5.2835231048157e-251!GO:0044422;organelle part;4.35414756249496e-179!GO:0044446;intracellular organelle part;6.41535218978251e-178!GO:0005737;cytoplasm;1.44649946892026e-168!GO:0044444;cytoplasmic part;1.53751878804819e-132!GO:0005634;nucleus;4.88210958304323e-121!GO:0032991;macromolecular complex;2.12833013505736e-118!GO:0044237;cellular metabolic process;5.58879092172616e-111!GO:0044238;primary metabolic process;1.90391942138728e-110!GO:0043170;macromolecule metabolic process;1.79927341947166e-106!GO:0030529;ribonucleoprotein complex;9.54535233858846e-97!GO:0044428;nuclear part;7.32953259393248e-95!GO:0043233;organelle lumen;9.70858682649935e-89!GO:0031974;membrane-enclosed lumen;9.70858682649935e-89!GO:0003723;RNA binding;5.99968851478755e-86!GO:0005739;mitochondrion;1.03400818158557e-76!GO:0043283;biopolymer metabolic process;6.86923349432806e-73!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.9889031205067e-69!GO:0006396;RNA processing;2.00737764964353e-63!GO:0010467;gene expression;1.17207469961246e-62!GO:0043234;protein complex;2.50638494512194e-60!GO:0031090;organelle membrane;6.4166693843526e-57!GO:0031981;nuclear lumen;1.71455390627703e-55!GO:0005840;ribosome;1.72882289810236e-53!GO:0044429;mitochondrial part;1.8693904527823e-53!GO:0005515;protein binding;2.92930001934536e-53!GO:0006259;DNA metabolic process;3.24607197987344e-52!GO:0016043;cellular component organization and biogenesis;4.18924810520208e-52!GO:0031967;organelle envelope;1.30999859473629e-49!GO:0031975;envelope;2.48162457542499e-49!GO:0006412;translation;2.67614024532305e-49!GO:0003676;nucleic acid binding;4.95045574477109e-49!GO:0016071;mRNA metabolic process;5.60566927043837e-47!GO:0003735;structural constituent of ribosome;3.11575062792353e-46!GO:0006996;organelle organization and biogenesis;6.71277717611402e-46!GO:0008380;RNA splicing;1.99330519475233e-44!GO:0033036;macromolecule localization;5.37401505001571e-44!GO:0015031;protein transport;1.41703990968984e-43!GO:0019538;protein metabolic process;9.59764382335378e-43!GO:0006397;mRNA processing;1.03678850043654e-40!GO:0033279;ribosomal subunit;3.03708136057332e-40!GO:0043228;non-membrane-bound organelle;6.17386014798851e-40!GO:0043232;intracellular non-membrane-bound organelle;6.17386014798851e-40!GO:0008104;protein localization;1.75801627957713e-39!GO:0045184;establishment of protein localization;1.10601011689502e-38!GO:0044260;cellular macromolecule metabolic process;2.45741479363913e-38!GO:0065003;macromolecular complex assembly;8.31921091200536e-38!GO:0044267;cellular protein metabolic process;1.09327883308868e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.10754193222065e-37!GO:0046907;intracellular transport;3.40205203815748e-36!GO:0044249;cellular biosynthetic process;7.23126856371849e-36!GO:0009058;biosynthetic process;8.90742937876372e-36!GO:0009059;macromolecule biosynthetic process;3.52380220968921e-35!GO:0005740;mitochondrial envelope;4.05199023944062e-35!GO:0005654;nucleoplasm;1.63404819707415e-34!GO:0005829;cytosol;2.29483291610502e-34!GO:0016070;RNA metabolic process;4.6024191752949e-34!GO:0019866;organelle inner membrane;1.03522666128405e-33!GO:0007049;cell cycle;2.60023944827055e-33!GO:0000166;nucleotide binding;2.90288125306442e-33!GO:0022607;cellular component assembly;6.12974695029573e-33!GO:0031966;mitochondrial membrane;1.60322259066296e-32!GO:0005681;spliceosome;3.44943467308711e-31!GO:0005743;mitochondrial inner membrane;1.72903168295282e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.50290922733381e-29!GO:0006886;intracellular protein transport;9.34051250325154e-29!GO:0044451;nucleoplasm part;4.2667754324812e-28!GO:0051276;chromosome organization and biogenesis;2.40888139382615e-27!GO:0022402;cell cycle process;6.22246826123115e-27!GO:0006974;response to DNA damage stimulus;1.66167286940999e-26!GO:0005694;chromosome;4.50826511071294e-26!GO:0000278;mitotic cell cycle;2.05568631038526e-25!GO:0044455;mitochondrial membrane part;5.88345380417126e-25!GO:0006281;DNA repair;8.11087536087875e-25!GO:0016462;pyrophosphatase activity;9.43878296245626e-25!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.83678414665248e-25!GO:0044445;cytosolic part;1.09661500463299e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;1.20150571544166e-24!GO:0051649;establishment of cellular localization;1.31843951964223e-24!GO:0044427;chromosomal part;4.59688087934336e-24!GO:0017111;nucleoside-triphosphatase activity;6.47829362513848e-24!GO:0051641;cellular localization;6.57957201461844e-24!GO:0006119;oxidative phosphorylation;1.11323220436863e-23!GO:0022403;cell cycle phase;2.5109046730562e-23!GO:0032553;ribonucleotide binding;1.4201986838717e-22!GO:0032555;purine ribonucleotide binding;1.4201986838717e-22!GO:0006260;DNA replication;2.86443792866829e-22!GO:0006457;protein folding;7.10942069240626e-22!GO:0017076;purine nucleotide binding;1.07585702420113e-21!GO:0015934;large ribosomal subunit;1.22280629029856e-21!GO:0005730;nucleolus;1.36471742874102e-21!GO:0006512;ubiquitin cycle;2.24826298896301e-21!GO:0051301;cell division;2.79234448828458e-21!GO:0012505;endomembrane system;3.04031098392862e-21!GO:0000087;M phase of mitotic cell cycle;4.07809576348265e-21!GO:0005524;ATP binding;4.88205625181399e-21!GO:0022618;protein-RNA complex assembly;8.29836218817211e-21!GO:0007067;mitosis;9.35988319036326e-21!GO:0000279;M phase;1.11615393145816e-20!GO:0031980;mitochondrial lumen;1.12081361689725e-20!GO:0005759;mitochondrial matrix;1.12081361689725e-20!GO:0043285;biopolymer catabolic process;1.24167627256622e-20!GO:0006325;establishment and/or maintenance of chromatin architecture;1.49823777291429e-20!GO:0032559;adenyl ribonucleotide binding;1.80540947011857e-20!GO:0016874;ligase activity;4.10773405015794e-20!GO:0044265;cellular macromolecule catabolic process;5.65628145901677e-20!GO:0015935;small ribosomal subunit;7.9889761626195e-20!GO:0006323;DNA packaging;8.69866996646257e-20!GO:0009057;macromolecule catabolic process;2.48713843730964e-19!GO:0030554;adenyl nucleotide binding;2.49069311664108e-19!GO:0005746;mitochondrial respiratory chain;6.88765730336203e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;8.09156487042518e-19!GO:0019941;modification-dependent protein catabolic process;1.74710363037708e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.74710363037708e-18!GO:0044257;cellular protein catabolic process;1.98402981415128e-18!GO:0006511;ubiquitin-dependent protein catabolic process;3.71767038022452e-18!GO:0031965;nuclear membrane;7.8853409391023e-18!GO:0030163;protein catabolic process;9.80176039747198e-18!GO:0016887;ATPase activity;1.56099185238624e-17!GO:0044453;nuclear membrane part;3.1858295502062e-17!GO:0008135;translation factor activity, nucleic acid binding;4.15309318496251e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.33873280359614e-17!GO:0042254;ribosome biogenesis and assembly;8.88285890765597e-17!GO:0050136;NADH dehydrogenase (quinone) activity;1.05177803255434e-16!GO:0003954;NADH dehydrogenase activity;1.05177803255434e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.05177803255434e-16!GO:0044432;endoplasmic reticulum part;1.96105780281942e-16!GO:0042623;ATPase activity, coupled;2.11888317360076e-16!GO:0044248;cellular catabolic process;2.11888317360076e-16!GO:0006605;protein targeting;2.50038277968606e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;3.06314568234427e-16!GO:0000375;RNA splicing, via transesterification reactions;3.06314568234427e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.06314568234427e-16!GO:0009719;response to endogenous stimulus;5.16193268451325e-16!GO:0005783;endoplasmic reticulum;6.34544631823561e-16!GO:0000502;proteasome complex (sensu Eukaryota);9.06416387192717e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.77929825003014e-15!GO:0005761;mitochondrial ribosome;2.16912877074793e-15!GO:0000313;organellar ribosome;2.16912877074793e-15!GO:0005635;nuclear envelope;2.53442399765475e-15!GO:0015630;microtubule cytoskeleton;6.37202769786213e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.06632515296581e-14!GO:0042773;ATP synthesis coupled electron transport;1.06632515296581e-14!GO:0051082;unfolded protein binding;1.4093316092815e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.57225709367065e-14!GO:0045271;respiratory chain complex I;1.57225709367065e-14!GO:0005747;mitochondrial respiratory chain complex I;1.57225709367065e-14!GO:0051186;cofactor metabolic process;1.65081736664207e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.33629106021455e-14!GO:0006399;tRNA metabolic process;7.20273515652754e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.02502039108835e-14!GO:0048193;Golgi vesicle transport;1.21475848032428e-13!GO:0005643;nuclear pore;1.25389512913129e-13!GO:0043412;biopolymer modification;1.6515100124787e-13!GO:0065004;protein-DNA complex assembly;2.07907147402745e-13!GO:0004386;helicase activity;3.94015909120722e-13!GO:0003743;translation initiation factor activity;3.97880457290097e-13!GO:0008134;transcription factor binding;4.82756784659997e-13!GO:0016604;nuclear body;4.82756784659997e-13!GO:0016568;chromatin modification;5.7939074829854e-13!GO:0050657;nucleic acid transport;5.7939074829854e-13!GO:0051236;establishment of RNA localization;5.7939074829854e-13!GO:0050658;RNA transport;5.7939074829854e-13!GO:0006403;RNA localization;6.1357355023886e-13!GO:0006413;translational initiation;1.31070856712292e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.94427728741423e-12!GO:0006333;chromatin assembly or disassembly;2.00487863180621e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.247618540561e-12!GO:0005794;Golgi apparatus;3.40920319322024e-12!GO:0008026;ATP-dependent helicase activity;5.16166710871238e-12!GO:0048770;pigment granule;6.01520915823294e-12!GO:0042470;melanosome;6.01520915823294e-12!GO:0006446;regulation of translational initiation;7.0492059603865e-12!GO:0006732;coenzyme metabolic process;1.04855333035918e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.04855333035918e-11!GO:0000785;chromatin;1.11035366901252e-11!GO:0006364;rRNA processing;1.37505914432599e-11!GO:0006163;purine nucleotide metabolic process;1.97540953952614e-11!GO:0005789;endoplasmic reticulum membrane;3.58964277518968e-11!GO:0046930;pore complex;3.63310913347648e-11!GO:0016072;rRNA metabolic process;3.78382482091724e-11!GO:0006464;protein modification process;4.80819983637885e-11!GO:0051028;mRNA transport;4.94968430906589e-11!GO:0065002;intracellular protein transport across a membrane;5.16964394573567e-11!GO:0051726;regulation of cell cycle;5.42640543527252e-11!GO:0008565;protein transporter activity;5.77254939865653e-11!GO:0000074;regulation of progression through cell cycle;5.85935066801259e-11!GO:0006913;nucleocytoplasmic transport;5.95641018539487e-11!GO:0016607;nuclear speck;6.98222233013157e-11!GO:0016192;vesicle-mediated transport;7.1688062282881e-11!GO:0006261;DNA-dependent DNA replication;7.71297304632757e-11!GO:0006164;purine nucleotide biosynthetic process;7.93552111769142e-11!GO:0009259;ribonucleotide metabolic process;1.25981423289826e-10!GO:0051169;nuclear transport;1.30146100619608e-10!GO:0009056;catabolic process;2.48491348428502e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.51562631355262e-10!GO:0008639;small protein conjugating enzyme activity;2.91129575396848e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.92619159154674e-10!GO:0043687;post-translational protein modification;3.29372628246133e-10!GO:0004842;ubiquitin-protein ligase activity;6.33605467736939e-10!GO:0016779;nucleotidyltransferase activity;9.10829431281256e-10!GO:0000775;chromosome, pericentric region;1.03606984989562e-09!GO:0019787;small conjugating protein ligase activity;1.13657810182069e-09!GO:0009150;purine ribonucleotide metabolic process;1.16728351464994e-09!GO:0005813;centrosome;1.42298955913459e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.46746549642644e-09!GO:0005815;microtubule organizing center;1.71628691458484e-09!GO:0009260;ribonucleotide biosynthetic process;1.74609205213522e-09!GO:0017038;protein import;1.84625967768593e-09!GO:0016740;transferase activity;2.39001891517573e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.39001891517573e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.39001891517573e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.39001891517573e-09!GO:0009055;electron carrier activity;2.41631218750425e-09!GO:0005819;spindle;3.29934408310062e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.62187139923953e-09!GO:0006461;protein complex assembly;3.77720304860399e-09!GO:0016881;acid-amino acid ligase activity;3.88160346658057e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.95747246090595e-09!GO:0003697;single-stranded DNA binding;5.34427132611435e-09!GO:0006334;nucleosome assembly;5.88656640893057e-09!GO:0043566;structure-specific DNA binding;7.10280797326514e-09!GO:0043038;amino acid activation;7.86262014709336e-09!GO:0006418;tRNA aminoacylation for protein translation;7.86262014709336e-09!GO:0043039;tRNA aminoacylation;7.86262014709336e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.25104080558185e-09!GO:0019222;regulation of metabolic process;1.50323903357258e-08!GO:0031497;chromatin assembly;1.69778309046666e-08!GO:0015986;ATP synthesis coupled proton transport;2.24704703352575e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.24704703352575e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.31124516694947e-08!GO:0009060;aerobic respiration;2.45736145572825e-08!GO:0003712;transcription cofactor activity;2.73730378953023e-08!GO:0009141;nucleoside triphosphate metabolic process;2.87050653149782e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.58659225279037e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.58659225279037e-08!GO:0051188;cofactor biosynthetic process;3.61905711464114e-08!GO:0005667;transcription factor complex;4.29727034567399e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.56113284766274e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.56113284766274e-08!GO:0000245;spliceosome assembly;5.08595309600327e-08!GO:0003899;DNA-directed RNA polymerase activity;5.86276883894493e-08!GO:0007005;mitochondrion organization and biogenesis;5.95749464320087e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.06962780373392e-08!GO:0007051;spindle organization and biogenesis;7.03998737155688e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.34764260891276e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.34764260891276e-08!GO:0019829;cation-transporting ATPase activity;7.90189969029619e-08!GO:0016787;hydrolase activity;8.72591788260976e-08!GO:0005788;endoplasmic reticulum lumen;8.84829807046673e-08!GO:0005793;ER-Golgi intermediate compartment;1.01433511938056e-07!GO:0032446;protein modification by small protein conjugation;1.02472222121923e-07!GO:0005768;endosome;1.3363651845749e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.45196738569234e-07!GO:0006350;transcription;1.61310388796291e-07!GO:0006366;transcription from RNA polymerase II promoter;2.06631125536129e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.0870431152028e-07!GO:0046034;ATP metabolic process;2.09929454079358e-07!GO:0000075;cell cycle checkpoint;2.36548089569577e-07!GO:0051329;interphase of mitotic cell cycle;2.37638219899709e-07!GO:0006754;ATP biosynthetic process;2.6019548477457e-07!GO:0006753;nucleoside phosphate metabolic process;2.6019548477457e-07!GO:0016567;protein ubiquitination;2.66253616940559e-07!GO:0044431;Golgi apparatus part;2.82687000664865e-07!GO:0045333;cellular respiration;3.09653861987264e-07!GO:0008094;DNA-dependent ATPase activity;3.26456873599721e-07!GO:0006099;tricarboxylic acid cycle;3.5607311520482e-07!GO:0046356;acetyl-CoA catabolic process;3.5607311520482e-07!GO:0045259;proton-transporting ATP synthase complex;3.65458901529158e-07!GO:0005657;replication fork;3.79306876644827e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.87331544180813e-07!GO:0006084;acetyl-CoA metabolic process;5.25891146878753e-07!GO:0043623;cellular protein complex assembly;5.99977725588575e-07!GO:0031323;regulation of cellular metabolic process;7.53432063403521e-07!GO:0000151;ubiquitin ligase complex;7.73177613419553e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.11218812678818e-07!GO:0044440;endosomal part;9.38296205632766e-07!GO:0010008;endosome membrane;9.38296205632766e-07!GO:0050794;regulation of cellular process;1.12786380195984e-06!GO:0051325;interphase;1.1877780545838e-06!GO:0016859;cis-trans isomerase activity;1.22552328376058e-06!GO:0003724;RNA helicase activity;1.39866998596991e-06!GO:0006752;group transfer coenzyme metabolic process;1.54182992830696e-06!GO:0048475;coated membrane;1.60402549825976e-06!GO:0030117;membrane coat;1.60402549825976e-06!GO:0009108;coenzyme biosynthetic process;1.61665846331537e-06!GO:0005874;microtubule;2.02561877897818e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.06180399491875e-06!GO:0030120;vesicle coat;2.6509202855312e-06!GO:0030662;coated vesicle membrane;2.6509202855312e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.04330743414509e-06!GO:0009117;nucleotide metabolic process;3.50550061318188e-06!GO:0009109;coenzyme catabolic process;4.14114335108811e-06!GO:0003677;DNA binding;4.22467904007951e-06!GO:0008033;tRNA processing;4.22467904007951e-06!GO:0008654;phospholipid biosynthetic process;4.37300408755945e-06!GO:0010468;regulation of gene expression;6.47319585896315e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.42242016596162e-06!GO:0006606;protein import into nucleus;8.54855364982872e-06!GO:0051187;cofactor catabolic process;8.54855364982872e-06!GO:0006414;translational elongation;1.05051840069971e-05!GO:0051170;nuclear import;1.06380503726871e-05!GO:0006613;cotranslational protein targeting to membrane;1.32235122413131e-05!GO:0016853;isomerase activity;1.37367671699891e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.44003764307598e-05!GO:0005762;mitochondrial large ribosomal subunit;1.45438029325944e-05!GO:0000315;organellar large ribosomal subunit;1.45438029325944e-05!GO:0003682;chromatin binding;1.45755798296313e-05!GO:0007017;microtubule-based process;1.73480757768716e-05!GO:0000139;Golgi membrane;1.73480757768716e-05!GO:0032774;RNA biosynthetic process;1.79274700390457e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.80754026283799e-05!GO:0006352;transcription initiation;2.17550594990159e-05!GO:0007059;chromosome segregation;2.18159742482643e-05!GO:0006302;double-strand break repair;2.34572903596113e-05!GO:0006839;mitochondrial transport;2.38243836811599e-05!GO:0006351;transcription, DNA-dependent;2.39686788908917e-05!GO:0005798;Golgi-associated vesicle;2.4338897359282e-05!GO:0006310;DNA recombination;2.47729197354894e-05!GO:0006383;transcription from RNA polymerase III promoter;3.31400144172817e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.42412576566136e-05!GO:0006793;phosphorus metabolic process;3.78674818504291e-05!GO:0006796;phosphate metabolic process;3.78674818504291e-05!GO:0043681;protein import into mitochondrion;3.95923855523058e-05!GO:0044452;nucleolar part;3.96436630939109e-05!GO:0005770;late endosome;4.09673917003035e-05!GO:0016741;transferase activity, transferring one-carbon groups;4.53506995459164e-05!GO:0016564;transcription repressor activity;4.62879807491818e-05!GO:0003684;damaged DNA binding;4.78324035645548e-05!GO:0000776;kinetochore;5.27227301831166e-05!GO:0051168;nuclear export;5.29804661645717e-05!GO:0004298;threonine endopeptidase activity;5.76103188566903e-05!GO:0008168;methyltransferase activity;6.06262435104013e-05!GO:0016363;nuclear matrix;6.09853653359854e-05!GO:0000314;organellar small ribosomal subunit;6.62542542369483e-05!GO:0005763;mitochondrial small ribosomal subunit;6.62542542369483e-05!GO:0000059;protein import into nucleus, docking;6.72515576887336e-05!GO:0043021;ribonucleoprotein binding;7.00293991428072e-05!GO:0008186;RNA-dependent ATPase activity;7.218303860498e-05!GO:0003924;GTPase activity;7.52237384258315e-05!GO:0003729;mRNA binding;7.80226745122408e-05!GO:0007052;mitotic spindle organization and biogenesis;8.46721941388839e-05!GO:0016310;phosphorylation;8.59268731952948e-05!GO:0046474;glycerophospholipid biosynthetic process;8.68228953601765e-05!GO:0015631;tubulin binding;8.76426679451973e-05!GO:0005769;early endosome;9.94148055532502e-05!GO:0051427;hormone receptor binding;9.94859264642293e-05!GO:0005773;vacuole;0.000101871858083583!GO:0045786;negative regulation of progression through cell cycle;0.000102345718669588!GO:0005525;GTP binding;0.000106232949053012!GO:0003690;double-stranded DNA binding;0.000112293031336895!GO:0045454;cell redox homeostasis;0.000133583069926626!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000137819508993845!GO:0006626;protein targeting to mitochondrion;0.00014775939398525!GO:0007093;mitotic cell cycle checkpoint;0.000154268958302517!GO:0051246;regulation of protein metabolic process;0.000158480428105634!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000168817166268061!GO:0015399;primary active transmembrane transporter activity;0.000168817166268061!GO:0005637;nuclear inner membrane;0.000170410969667315!GO:0046489;phosphoinositide biosynthetic process;0.000170498540730832!GO:0015980;energy derivation by oxidation of organic compounds;0.000201631568930492!GO:0004004;ATP-dependent RNA helicase activity;0.000211210970473582!GO:0035257;nuclear hormone receptor binding;0.000214058376726298!GO:0012501;programmed cell death;0.000224559221906029!GO:0016023;cytoplasmic membrane-bound vesicle;0.000232505094971166!GO:0031988;membrane-bound vesicle;0.000260089150457305!GO:0006338;chromatin remodeling;0.000264067665334841!GO:0019867;outer membrane;0.000272292211836222!GO:0030027;lamellipodium;0.000273954208481884!GO:0045449;regulation of transcription;0.000278098175323874!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000281404349017434!GO:0006915;apoptosis;0.000284324863235798!GO:0031968;organelle outer membrane;0.000293094826325503!GO:0006612;protein targeting to membrane;0.000294624982244689!GO:0007088;regulation of mitosis;0.000321717649978265!GO:0007006;mitochondrial membrane organization and biogenesis;0.000322077306680794!GO:0016563;transcription activator activity;0.000327856544629566!GO:0005876;spindle microtubule;0.000330006165784344!GO:0003678;DNA helicase activity;0.000340066315110868!GO:0008250;oligosaccharyl transferase complex;0.000340310842571604!GO:0000922;spindle pole;0.000346827201666348!GO:0000228;nuclear chromosome;0.000375369059493844!GO:0000323;lytic vacuole;0.000408425663847535!GO:0005764;lysosome;0.000408425663847535!GO:0043284;biopolymer biosynthetic process;0.000430651867500692!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000438631656779644!GO:0000786;nucleosome;0.000441155409690546!GO:0003713;transcription coactivator activity;0.000442925103076081!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000443549869905748!GO:0005048;signal sequence binding;0.00046497250855565!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000476218174646125!GO:0044454;nuclear chromosome part;0.000498680071648969!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000545898357676741!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000557193226205165!GO:0004518;nuclease activity;0.000568666777358119!GO:0031324;negative regulation of cellular metabolic process;0.000597923960629885!GO:0051052;regulation of DNA metabolic process;0.000610115827667907!GO:0005885;Arp2/3 protein complex;0.000611837818776165!GO:0051920;peroxiredoxin activity;0.000624371428746821!GO:0000082;G1/S transition of mitotic cell cycle;0.000626658546931425!GO:0030880;RNA polymerase complex;0.000655030119762062!GO:0032508;DNA duplex unwinding;0.000655030119762062!GO:0032392;DNA geometric change;0.000655030119762062!GO:0008017;microtubule binding;0.000663930747826483!GO:0051540;metal cluster binding;0.000664624042537636!GO:0051536;iron-sulfur cluster binding;0.000664624042537636!GO:0005684;U2-dependent spliceosome;0.000665126628958262!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000667261362560448!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000667774377654506!GO:0009165;nucleotide biosynthetic process;0.000684406468017392!GO:0009112;nucleobase metabolic process;0.000696067874159487!GO:0006091;generation of precursor metabolites and energy;0.000705426381662708!GO:0003711;transcription elongation regulator activity;0.000719118305845116!GO:0050789;regulation of biological process;0.000723419511283603!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000739227328319252!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000739227328319252!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000739227328319252!GO:0008219;cell death;0.000740292136637116!GO:0016265;death;0.000740292136637116!GO:0004576;oligosaccharyl transferase activity;0.000757750376370835!GO:0007010;cytoskeleton organization and biogenesis;0.000770852648714735!GO:0006284;base-excision repair;0.000775491068410574!GO:0016491;oxidoreductase activity;0.000835754223074514!GO:0006402;mRNA catabolic process;0.000846052990633709!GO:0032200;telomere organization and biogenesis;0.000846052990633709!GO:0000723;telomere maintenance;0.000846052990633709!GO:0030867;rough endoplasmic reticulum membrane;0.000867654137792495!GO:0006650;glycerophospholipid metabolic process;0.00092082325271194!GO:0031252;leading edge;0.000975896735157449!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0010288527770145!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0010288527770145!GO:0018196;peptidyl-asparagine modification;0.00104282196825867!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00104282196825867!GO:0033116;ER-Golgi intermediate compartment membrane;0.00107841025997035!GO:0006289;nucleotide-excision repair;0.00109621920479498!GO:0006818;hydrogen transport;0.00110615563675379!GO:0031982;vesicle;0.0011259961947743!GO:0003714;transcription corepressor activity;0.00113386196881839!GO:0016251;general RNA polymerase II transcription factor activity;0.00114926310792775!GO:0006497;protein amino acid lipidation;0.00116733161052753!GO:0043492;ATPase activity, coupled to movement of substances;0.00116907812698335!GO:0005741;mitochondrial outer membrane;0.00122350866462396!GO:0031410;cytoplasmic vesicle;0.00126840810686659!GO:0031072;heat shock protein binding;0.00128312132736444!GO:0032561;guanyl ribonucleotide binding;0.00132466228538022!GO:0019001;guanyl nucleotide binding;0.00132466228538022!GO:0006505;GPI anchor metabolic process;0.00134664009411698!GO:0006268;DNA unwinding during replication;0.00134999801202931!GO:0043596;nuclear replication fork;0.00136222563530495!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00137129044290532!GO:0006401;RNA catabolic process;0.00138869472494901!GO:0006506;GPI anchor biosynthetic process;0.00138869472494901!GO:0015992;proton transport;0.00139805332245597!GO:0006270;DNA replication initiation;0.0014171313847443!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00144750404761606!GO:0000428;DNA-directed RNA polymerase complex;0.00144750404761606!GO:0006695;cholesterol biosynthetic process;0.0014702292266664!GO:0046467;membrane lipid biosynthetic process;0.00148924817315496!GO:0005758;mitochondrial intermembrane space;0.00150107735608133!GO:0030384;phosphoinositide metabolic process;0.00151512489597469!GO:0016126;sterol biosynthetic process;0.00151683322520773!GO:0006144;purine base metabolic process;0.00153873100201117!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00155246585991976!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00156544446478059!GO:0046483;heterocycle metabolic process;0.00158255899746056!GO:0004674;protein serine/threonine kinase activity;0.00160317114901886!GO:0019843;rRNA binding;0.00160905398190414!GO:0046519;sphingoid metabolic process;0.00160976985764168!GO:0006672;ceramide metabolic process;0.00165399282271761!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00167316222247517!GO:0016481;negative regulation of transcription;0.0017652823955211!GO:0005875;microtubule associated complex;0.00179997194747896!GO:0005669;transcription factor TFIID complex;0.00181421975074341!GO:0006355;regulation of transcription, DNA-dependent;0.00183003532508795!GO:0051539;4 iron, 4 sulfur cluster binding;0.00185340228000155!GO:0031124;mRNA 3'-end processing;0.00188662274753721!GO:0048500;signal recognition particle;0.00200633613222556!GO:0045045;secretory pathway;0.00212139062972545!GO:0042158;lipoprotein biosynthetic process;0.00215175308443073!GO:0006405;RNA export from nucleus;0.00225491305139353!GO:0019899;enzyme binding;0.00226534268122538!GO:0006611;protein export from nucleus;0.00227130297302758!GO:0043624;cellular protein complex disassembly;0.00229499678048997!GO:0030658;transport vesicle membrane;0.00231111089639269!GO:0004527;exonuclease activity;0.00241765247348505!GO:0016272;prefoldin complex;0.00251717459475431!GO:0006378;mRNA polyadenylation;0.00259218204340386!GO:0051087;chaperone binding;0.00260903278326959!GO:0000792;heterochromatin;0.00262404593298325!GO:0051252;regulation of RNA metabolic process;0.00266311197858723!GO:0048471;perinuclear region of cytoplasm;0.0027006542899262!GO:0000910;cytokinesis;0.00292465007340202!GO:0006891;intra-Golgi vesicle-mediated transport;0.00293560508368739!GO:0044262;cellular carbohydrate metabolic process;0.00302820113015819!GO:0043601;nuclear replisome;0.00302820113015819!GO:0030894;replisome;0.00302820113015819!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00304105536414551!GO:0031970;organelle envelope lumen;0.00312688639734973!GO:0009892;negative regulation of metabolic process;0.00315121583019134!GO:0006740;NADPH regeneration;0.00325170373384528!GO:0006098;pentose-phosphate shunt;0.00325170373384528!GO:0000781;chromosome, telomeric region;0.0032855342941371!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00332407151212352!GO:0030118;clathrin coat;0.00337001966519356!GO:0051789;response to protein stimulus;0.00343799698234612!GO:0006986;response to unfolded protein;0.00343799698234612!GO:0016585;chromatin remodeling complex;0.00346136377461995!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00350216667674324!GO:0015002;heme-copper terminal oxidase activity;0.00350216667674324!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00350216667674324!GO:0004129;cytochrome-c oxidase activity;0.00350216667674324!GO:0003887;DNA-directed DNA polymerase activity;0.00352213972757616!GO:0000287;magnesium ion binding;0.00407100690469946!GO:0008287;protein serine/threonine phosphatase complex;0.00421609035357939!GO:0000793;condensed chromosome;0.00424879155029736!GO:0008312;7S RNA binding;0.00427231395357938!GO:0016790;thiolester hydrolase activity;0.00433450001318936!GO:0000339;RNA cap binding;0.00433450001318936!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00435049445177645!GO:0030660;Golgi-associated vesicle membrane;0.00437672937262904!GO:0042393;histone binding;0.00439612811658556!GO:0005905;coated pit;0.00464559758610014!GO:0000049;tRNA binding;0.00470760506058035!GO:0000819;sister chromatid segregation;0.00470760506058035!GO:0033673;negative regulation of kinase activity;0.00474160349832147!GO:0006469;negative regulation of protein kinase activity;0.00474160349832147!GO:0009451;RNA modification;0.00486713738373793!GO:0044450;microtubule organizing center part;0.00513182113894218!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00515312950012709!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00531100661469094!GO:0045047;protein targeting to ER;0.00531100661469094!GO:0009303;rRNA transcription;0.00531100661469094!GO:0019783;small conjugating protein-specific protease activity;0.00532518936219703!GO:0043488;regulation of mRNA stability;0.0054469996456054!GO:0043487;regulation of RNA stability;0.0054469996456054!GO:0008022;protein C-terminus binding;0.00557003684571199!GO:0000070;mitotic sister chromatid segregation;0.00562347008311966!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00570389743999616!GO:0051348;negative regulation of transferase activity;0.00576501624034534!GO:0032259;methylation;0.00576592421418306!GO:0000725;recombinational repair;0.00581823709753556!GO:0000724;double-strand break repair via homologous recombination;0.00581823709753556!GO:0006595;polyamine metabolic process;0.00581823709753556!GO:0032984;macromolecular complex disassembly;0.00581823709753556!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00584584772212004!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00617326656916259!GO:0007004;telomere maintenance via telomerase;0.00625163722881286!GO:0030663;COPI coated vesicle membrane;0.00644765450881603!GO:0030126;COPI vesicle coat;0.00644765450881603!GO:0030137;COPI-coated vesicle;0.00651512770199463!GO:0005869;dynactin complex;0.00676786842403913!GO:0030134;ER to Golgi transport vesicle;0.00686279148844975!GO:0043241;protein complex disassembly;0.00704774101096396!GO:0043189;H4/H2A histone acetyltransferase complex;0.00725652437823058!GO:0004843;ubiquitin-specific protease activity;0.00737386468476292!GO:0046112;nucleobase biosynthetic process;0.00740480490163054!GO:0016407;acetyltransferase activity;0.00744191856609675!GO:0009116;nucleoside metabolic process;0.00760034636498242!GO:0031123;RNA 3'-end processing;0.00802968388711331!GO:0022890;inorganic cation transmembrane transporter activity;0.00805226966444522!GO:0006607;NLS-bearing substrate import into nucleus;0.00821893044794245!GO:0031577;spindle checkpoint;0.00821893044794245!GO:0022406;membrane docking;0.00857586922878573!GO:0048278;vesicle docking;0.00857586922878573!GO:0000209;protein polyubiquitination;0.0088047849444178!GO:0030119;AP-type membrane coat adaptor complex;0.00890659097999415!GO:0048487;beta-tubulin binding;0.00892996948532632!GO:0005832;chaperonin-containing T-complex;0.00902465810874632!GO:0006916;anti-apoptosis;0.00914227486002001!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00916901772809265!GO:0003702;RNA polymerase II transcription factor activity;0.00917004571670986!GO:0031902;late endosome membrane;0.00922055608496609!GO:0008139;nuclear localization sequence binding;0.00922055608496609!GO:0008276;protein methyltransferase activity;0.00967013461253733!GO:0003746;translation elongation factor activity;0.00968638996185362!GO:0043407;negative regulation of MAP kinase activity;0.00969106502907074!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00974281223332545!GO:0004221;ubiquitin thiolesterase activity;0.010244637077531!GO:0008180;signalosome;0.0103330204055221!GO:0000123;histone acetyltransferase complex;0.0103822689234211!GO:0016044;membrane organization and biogenesis;0.0106113061376408!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0106117014106449!GO:0043414;biopolymer methylation;0.0108574343737063!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0109706156031862!GO:0008415;acyltransferase activity;0.0112503529498911!GO:0043130;ubiquitin binding;0.0114876929408328!GO:0032182;small conjugating protein binding;0.0114876929408328!GO:0004722;protein serine/threonine phosphatase activity;0.0116093402253199!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0116898727142817!GO:0030131;clathrin adaptor complex;0.0119532925391586!GO:0035267;NuA4 histone acetyltransferase complex;0.0119532925391586!GO:0000152;nuclear ubiquitin ligase complex;0.0120754141341264!GO:0004003;ATP-dependent DNA helicase activity;0.0121007759476222!GO:0030521;androgen receptor signaling pathway;0.0129927677821505!GO:0000096;sulfur amino acid metabolic process;0.0132521278737577!GO:0006278;RNA-dependent DNA replication;0.0132646588554832!GO:0006376;mRNA splice site selection;0.0135817443674798!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0135817443674798!GO:0000118;histone deacetylase complex;0.0136812242270444!GO:0030133;transport vesicle;0.0140670184580903!GO:0043631;RNA polyadenylation;0.0141499853381398!GO:0030176;integral to endoplasmic reticulum membrane;0.0146387227918429!GO:0030127;COPII vesicle coat;0.0147833800337155!GO:0012507;ER to Golgi transport vesicle membrane;0.0147833800337155!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0148516754291064!GO:0007021;tubulin folding;0.0149728635640038!GO:0006275;regulation of DNA replication;0.0151406896546511!GO:0030132;clathrin coat of coated pit;0.0159706620926257!GO:0016746;transferase activity, transferring acyl groups;0.0160287799675866!GO:0022411;cellular component disassembly;0.0160466930818141!GO:0006220;pyrimidine nucleotide metabolic process;0.0165081874668861!GO:0006400;tRNA modification;0.0165146145718406!GO:0006904;vesicle docking during exocytosis;0.0167406515170982!GO:0006509;membrane protein ectodomain proteolysis;0.0174451015721166!GO:0033619;membrane protein proteolysis;0.0174451015721166!GO:0017166;vinculin binding;0.0176183408129258!GO:0043022;ribosome binding;0.0179009736684024!GO:0008601;protein phosphatase type 2A regulator activity;0.0181570399908371!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0182372059388692!GO:0045039;protein import into mitochondrial inner membrane;0.0182372059388692!GO:0031570;DNA integrity checkpoint;0.0183389008392268!GO:0031625;ubiquitin protein ligase binding;0.0184659816772702!GO:0050662;coenzyme binding;0.019087609562935!GO:0008610;lipid biosynthetic process;0.0193839013423546!GO:0031371;ubiquitin conjugating enzyme complex;0.0199014930922548!GO:0007050;cell cycle arrest;0.0201448362988189!GO:0005774;vacuolar membrane;0.0203744656917403!GO:0007040;lysosome organization and biogenesis;0.020444498782555!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0208644788864135!GO:0048523;negative regulation of cellular process;0.021346064247171!GO:0044438;microbody part;0.0216687963955678!GO:0044439;peroxisomal part;0.0216687963955678!GO:0042026;protein refolding;0.0220611967218302!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0228200007120096!GO:0007034;vacuolar transport;0.0228456727949754!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0228952304552366!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0230433350053626!GO:0006643;membrane lipid metabolic process;0.0233082592105895!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0233190369399829!GO:0005663;DNA replication factor C complex;0.0234517044224977!GO:0017134;fibroblast growth factor binding;0.0234517044224977!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0240382757195203!GO:0030508;thiol-disulfide exchange intermediate activity;0.0241182819813003!GO:0008536;Ran GTPase binding;0.0243361315259629!GO:0000159;protein phosphatase type 2A complex;0.0253012551372995!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0254551655854332!GO:0005791;rough endoplasmic reticulum;0.0257110367919261!GO:0035258;steroid hormone receptor binding;0.0259790490898019!GO:0000178;exosome (RNase complex);0.0259790490898019!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0260378057787634!GO:0010257;NADH dehydrogenase complex assembly;0.0260378057787634!GO:0033108;mitochondrial respiratory chain complex assembly;0.0260378057787634!GO:0016569;covalent chromatin modification;0.0263117938351508!GO:0006007;glucose catabolic process;0.0265567677475832!GO:0005652;nuclear lamina;0.0267017157931048!GO:0009124;nucleoside monophosphate biosynthetic process;0.0268296035955784!GO:0009123;nucleoside monophosphate metabolic process;0.0268296035955784!GO:0000726;non-recombinational repair;0.0270205711913493!GO:0005862;muscle thin filament tropomyosin;0.0274774081318014!GO:0008097;5S rRNA binding;0.0278165508274172!GO:0005784;translocon complex;0.0284770876731735!GO:0065009;regulation of a molecular function;0.0289677070251602!GO:0030911;TPR domain binding;0.0295385114451706!GO:0040029;regulation of gene expression, epigenetic;0.0296956419617286!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0306160261443059!GO:0003756;protein disulfide isomerase activity;0.0306294646179789!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0306294646179789!GO:0031461;cullin-RING ubiquitin ligase complex;0.0311788466163332!GO:0042981;regulation of apoptosis;0.0311788466163332!GO:0006301;postreplication repair;0.0312233214132909!GO:0030149;sphingolipid catabolic process;0.0315404514526247!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0316247284507276!GO:0043067;regulation of programmed cell death;0.0316247284507276!GO:0000790;nuclear chromatin;0.0318547451735789!GO:0043069;negative regulation of programmed cell death;0.0319215423432823!GO:0030125;clathrin vesicle coat;0.0319734986719518!GO:0030665;clathrin coated vesicle membrane;0.0319734986719518!GO:0030145;manganese ion binding;0.0322917777277334!GO:0005938;cell cortex;0.0323274962311098!GO:0004532;exoribonuclease activity;0.0323483220560008!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0323483220560008!GO:0031903;microbody membrane;0.0325395825579328!GO:0005778;peroxisomal membrane;0.0325395825579328!GO:0006360;transcription from RNA polymerase I promoter;0.0327873493104736!GO:0051656;establishment of organelle localization;0.0331158264798966!GO:0006892;post-Golgi vesicle-mediated transport;0.0331196182554361!GO:0005881;cytoplasmic microtubule;0.0333350224444515!GO:0016581;NuRD complex;0.0348897884914952!GO:0006779;porphyrin biosynthetic process;0.0348897884914952!GO:0033014;tetrapyrrole biosynthetic process;0.0348897884914952!GO:0051297;centrosome organization and biogenesis;0.0353560495816877!GO:0031023;microtubule organizing center organization and biogenesis;0.0353560495816877!GO:0008143;poly(A) binding;0.0355352280427799!GO:0043066;negative regulation of apoptosis;0.0362471490730321!GO:0008234;cysteine-type peptidase activity;0.0362784108874057!GO:0009066;aspartate family amino acid metabolic process;0.0362784108874057!GO:0007264;small GTPase mediated signal transduction;0.0367741731641746!GO:0006778;porphyrin metabolic process;0.0369308943887029!GO:0033013;tetrapyrrole metabolic process;0.0369308943887029!GO:0042769;DNA damage response, detection of DNA damage;0.03731127307014!GO:0031901;early endosome membrane;0.0378195354775206!GO:0008408;3'-5' exonuclease activity;0.0380363644913157!GO:0009113;purine base biosynthetic process;0.038651131986348!GO:0044437;vacuolar part;0.0392941877154231!GO:0007033;vacuole organization and biogenesis;0.0393844134654638!GO:0009067;aspartate family amino acid biosynthetic process;0.0394203758854156!GO:0019377;glycolipid catabolic process;0.0397979871690082!GO:0046966;thyroid hormone receptor binding;0.0399089617592425!GO:0008538;proteasome activator activity;0.039910577732443!GO:0004523;ribonuclease H activity;0.0407240720887484!GO:0004526;ribonuclease P activity;0.0407969841051422!GO:0045815;positive regulation of gene expression, epigenetic;0.0417941972166758!GO:0019318;hexose metabolic process;0.0422551117844904!GO:0016408;C-acyltransferase activity;0.0425329761074243!GO:0005801;cis-Golgi network;0.0429312309473624!GO:0006730;one-carbon compound metabolic process;0.0447900133348555!GO:0005996;monosaccharide metabolic process;0.0448833142605237!GO:0032039;integrator complex;0.0454374905658451!GO:0003923;GPI-anchor transamidase activity;0.0454374905658451!GO:0016255;attachment of GPI anchor to protein;0.0454374905658451!GO:0042765;GPI-anchor transamidase complex;0.0454374905658451!GO:0009081;branched chain family amino acid metabolic process;0.0458200234463028!GO:0004239;methionyl aminopeptidase activity;0.0458497482804385!GO:0015036;disulfide oxidoreductase activity;0.045938908403812!GO:0009083;branched chain family amino acid catabolic process;0.0465540663578983!GO:0016570;histone modification;0.046819130523173!GO:0006308;DNA catabolic process;0.0468611242557575!GO:0009161;ribonucleoside monophosphate metabolic process;0.0470663596096699!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0470663596096699!GO:0004549;tRNA-specific ribonuclease activity;0.0473877185256716!GO:0051287;NAD binding;0.0475435933579894!GO:0031628;opioid receptor binding;0.0478970101166621!GO:0031852;mu-type opioid receptor binding;0.0478970101166621!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0491323913885651!GO:0008270;zinc ion binding;0.0491575090011918!GO:0046128;purine ribonucleoside metabolic process;0.0491575090011918!GO:0042278;purine nucleoside metabolic process;0.0491575090011918!GO:0051640;organelle localization;0.0494229979064771!GO:0000030;mannosyltransferase activity;0.049697239016911
|sample_id=10810
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=adrenal gland
|top_motifs=NRF1:2.27862748454;ELK1,4_GABP{A,B1}:1.985631442;CRX:1.7582384136;PPARG:1.71771821788;ZNF143:1.66885138691;NANOG:1.59145877697;NFY{A,B,C}:1.48400984147;VSX1,2:1.4415073775;GFI1:1.42292769238;PAX8:1.33369678592;E2F1..5:1.27153384789;TFDP1:1.22193738226;ALX1:1.21437588511;NKX2-3_NKX2-5:1.13734680921;PAX4:1.03704747859;POU1F1:1.00782782659;PBX1:1.0006606723;STAT1,3:0.989935733115;PAX1,9:0.971228801936;HOX{A6,A7,B6,B7}:0.940686148101;ONECUT1,2:0.924556431255;RFX1:0.842219889962;LHX3,4:0.794525910687;NKX6-1,2:0.779049531738;AIRE:0.712896675565;MYB:0.687919078819;ARID5B:0.666041896853;SOX17:0.665622536125;FOXQ1:0.650281064083;HOX{A4,D4}:0.62747508164;YY1:0.609377861381;HIC1:0.575928284826;BREu{core}:0.527811037255;EVI1:0.52740722478;HOX{A5,B5}:0.521647003832;T:0.51258467067;OCT4_SOX2{dimer}:0.508162970826;RBPJ:0.504747158101;TEF:0.479186654898;GATA6:0.422979278139;PRRX1,2:0.412242125126;FOX{I1,J2}:0.393944226519;SOX{8,9,10}:0.369738148203;CDX1,2,4:0.34717279035;STAT5{A,B}:0.341224537571;HMGA1,2:0.340026803484;ZNF384:0.324903456898;FOXM1:0.315842855118;PAX3,7:0.31193649109;EN1,2:0.287810239912;LEF1_TCF7_TCF7L1,2:0.238259655838;NR5A1,2:0.23599108503;NR6A1:0.232352583208;PITX1..3:0.230534913895;ADNP_IRX_SIX_ZHX:0.20503996838;HNF4A_NR2F1,2:0.201895179425;HBP1_HMGB_SSRP1_UBTF:0.195633473582;HSF1,2:0.19375550215;ZFP161:0.193192537261;CUX2:0.178879855849;IKZF1:0.163349275795;IKZF2:0.15612287272;ZEB1:0.122591524536;SP1:0.101966626926;POU6F1:0.0815153974945;POU2F1..3:0.0708605350342;KLF4:0.024201833253;HAND1,2:0.0238503015365;FOXA2:0.0234841442728;SREBF1,2:0.0193419295879;GCM1,2:0.0191830657247;ATF5_CREB3:0.0181135623924;EGR1..3:0.00705710380978;REST:-0.0127749997867;GFI1B:-0.0308193546161;DMAP1_NCOR{1,2}_SMARC:-0.0338030648298;FOXP3:-0.034142922726;FOXN1:-0.0351303595437;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0472635458934;TFAP2B:-0.0666832776353;GTF2A1,2:-0.0669982645724;FOXP1:-0.0917479459679;TEAD1:-0.100222540673;ESRRA:-0.137829752094;CREB1:-0.154027163687;NKX2-1,4:-0.176115219049;CDC5L:-0.188492686843;TGIF1:-0.202828175553;FOXL1:-0.202949713015;PATZ1:-0.210510669909;RORA:-0.22704028649;SNAI1..3:-0.232088131984;RUNX1..3:-0.236151959085;ZBTB16:-0.246925452666;ZBTB6:-0.250108087985;HNF1A:-0.278300423534;HOXA9_MEIS1:-0.295303419132;HES1:-0.299229777288;RREB1:-0.310055607252;LMO2:-0.311009450182;AHR_ARNT_ARNT2:-0.313463560235;MYOD1:-0.316670320503;ELF1,2,4:-0.320718485869;NKX3-2:-0.322538958081;NFKB1_REL_RELA:-0.331498011717;PDX1:-0.337506078281;DBP:-0.351429109429;NFE2L2:-0.352774883809;TP53:-0.365037590395;POU3F1..4:-0.366016290037;UFEwm:-0.376395808771;bHLH_family:-0.382753997328;SOX2:-0.402873682212;MEF2{A,B,C,D}:-0.408263600642;XBP1:-0.417406332081;RXR{A,B,G}:-0.418685953327;MZF1:-0.421304539278;RFX2..5_RFXANK_RFXAP:-0.42856818849;FOS_FOS{B,L1}_JUN{B,D}:-0.435341449237;FOSL2:-0.46819096424;PAX5:-0.488814274748;PRDM1:-0.49193060081;JUN:-0.501841414196;SRF:-0.505948888139;NFE2L1:-0.509627603754;SPIB:-0.517863626108;ATF2:-0.531757509433;PAX6:-0.534515220097;SPI1:-0.538085217915;AR:-0.553623713032;NR3C1:-0.554478689406;NANOG{mouse}:-0.556788391002;NFE2:-0.558162707072;ATF4:-0.567365997577;TOPORS:-0.568884427105;HLF:-0.569962065265;BACH2:-0.582818900429;XCPE1{core}:-0.588466373635;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.590255472496;NHLH1,2:-0.601935297364;MED-1{core}:-0.630420764188;TAL1_TCF{3,4,12}:-0.66239441003;MTE{core}:-0.674738961763;PAX2:-0.684924230513;ZIC1..3:-0.695608010784;SOX5:-0.698298079247;FOX{D1,D2}:-0.705943006118;ZNF148:-0.722138068552;GATA4:-0.724766687438;FOXD3:-0.736998487825;TLX1..3_NFIC{dimer}:-0.753965875352;ESR1:-0.757668310934;GTF2I:-0.776778810093;MYBL2:-0.783153215615;NKX3-1:-0.785376893874;POU5F1:-0.79111070154;NFIX:-0.793899730809;MTF1:-0.886437397112;ALX4:-0.891560767863;FOXO1,3,4:-0.915868690151;BPTF:-0.933167230516;ETS1,2:-0.940395531867;NFIL3:-0.941591272632;FOX{F1,F2,J1}:-0.962486661269;NKX2-2,8:-0.970981838627;IRF7:-0.974314450478;TFAP2{A,C}:-0.994624285089;MYFfamily:-1.04265004254;ZNF423:-1.06032027298;NFATC1..3:-1.0692906736;TLX2:-1.07670625323;SPZ1:-1.08479737025;GLI1..3:-1.10203362322;CEBPA,B_DDIT3:-1.13242628214;ZNF238:-1.13468500785;EP300:-1.14577049006;NR1H4:-1.17165450435;TFAP4:-1.21307014736;IRF1,2:-1.26273301411;STAT2,4,6:-1.26410828874;EBF1:-1.27638544596;MAZ:-1.29028614029;TFCP2:-1.3371682509;ATF6:-1.35026832235;HMX1:-1.35042397375;GZF1:-1.35566603468;HIF1A:-1.38977492823;SMAD1..7,9:-1.53097223013;TBP:-1.59874586588;RXRA_VDR{dimer}:-1.65517122003;MAFB:-1.73823918554;TBX4,5:-1.96209347971
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10810-111A9;search_select_hide=table117:FF:10810-111A9
}}
}}

Latest revision as of 15:06, 3 June 2020

Name:adrenal cortex adenocarcinoma cell line:SW-13
Species:Human (Homo sapiens)
Library ID:CNhs11893
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueadrenal gland
dev stageNA
sexfemale
ageunknown
cell typeadrenal cortex cell
cell lineSW-13
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005708
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11893 CAGE DRX007823 DRR008695
Accession ID Hg19

Library idBAMCTSS
CNhs11893 DRZ000120 DRZ001505
Accession ID Hg38

Library idBAMCTSS
CNhs11893 DRZ011470 DRZ012855
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
RNA-Seq  SAMD00005708
Library accession numbers

Library idMethodExp. accession idRun accession id
RDhi10088 RNA-Seq DRX057145 DRR062904
Accession ID Hg19

Library idBAMCTSS
RDhi10088 DRZ007980


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.116
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.518
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0.912
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0664
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0658
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0803
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.049
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0761
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.138
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.023
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.5
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11893

Jaspar motifP-value
MA0002.20.0066
MA0003.10.246
MA0004.10.794
MA0006.10.36
MA0007.10.759
MA0009.10.513
MA0014.10.856
MA0017.10.0552
MA0018.20.383
MA0019.10.94
MA0024.13.41186e-4
MA0025.10.817
MA0027.10.342
MA0028.15.874e-6
MA0029.10.289
MA0030.10.00344
MA0031.10.205
MA0035.20.145
MA0038.12.08091e-5
MA0039.20.321
MA0040.10.266
MA0041.10.791
MA0042.10.503
MA0043.10.539
MA0046.10.142
MA0047.20.255
MA0048.10.323
MA0050.13.99956e-9
MA0051.13.29211e-6
MA0052.10.0027
MA0055.10.0039
MA0057.10.81
MA0058.10.898
MA0059.10.876
MA0060.15.81915e-16
MA0061.10.0532
MA0062.21.43517e-7
MA0065.20.317
MA0066.10.675
MA0067.10.98
MA0068.10.647
MA0069.10.768
MA0070.10.481
MA0071.10.846
MA0072.10.108
MA0073.10.606
MA0074.10.186
MA0076.11.21815e-7
MA0077.10.97
MA0078.10.737
MA0079.20.717
MA0080.28.75972e-11
MA0081.10.34
MA0083.10.0973
MA0084.10.351
MA0087.10.417
MA0088.10.0287
MA0090.10.414
MA0091.10.00474
MA0092.10.157
MA0093.10.628
MA0099.23.42688e-13
MA0100.10.192
MA0101.10.836
MA0102.21.80134e-4
MA0103.10.928
MA0104.20.208
MA0105.10.0102
MA0106.10.521
MA0107.10.395
MA0108.24.54337e-7
MA0111.10.974
MA0112.22.73272e-4
MA0113.10.0309
MA0114.10.939
MA0115.10.808
MA0116.10.0454
MA0117.10.801
MA0119.10.0836
MA0122.10.95
MA0124.10.742
MA0125.10.351
MA0131.10.158
MA0135.10.87
MA0136.11.51305e-6
MA0137.20.262
MA0138.20.549
MA0139.10.0356
MA0140.10.171
MA0141.10.447
MA0142.10.942
MA0143.10.0459
MA0144.10.0189
MA0145.10.103
MA0146.10.411
MA0147.10.126
MA0148.10.196
MA0149.10.565
MA0150.15.49666e-4
MA0152.10.343
MA0153.10.161
MA0154.10.0144
MA0155.10.309
MA0156.10.321
MA0157.10.46
MA0159.10.123
MA0160.10.695
MA0162.10.0449
MA0163.10.164
MA0164.10.778
MA0258.10.0228
MA0259.10.0728



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11893

Novel motifP-value
10.93
100.782
1000.474
1010.806
1020.656
1030.446
1040.666
1050.575
1061.176e-7
1070.00217
1080.533
1090.563
110.623
1100.87
1110.825
1120.00651
1130.0486
1140.234
1150.399
1160.733
1170.966
1180.327
1190.814
120.709
1200.857
1210.297
1220.81
1230.914
1240.59
1250.733
1260.97
1270.773
1280.00213
1290.745
130.953
1300.0235
1310.0316
1320.585
1330.117
1340.0785
1350.0212
1360.268
1370.276
1380.422
1390.025
140.471
1400.0534
1410.56
1420.976
1430.169
1440.95
1450.638
1460.389
1470.89
1480.00466
1490.0553
150.417
1500.276
1510.247
1520.029
1530.534
1540.7
1550.672
1560.736
1570.277
1580.746
1590.421
160.352
1600.197
1610.774
1620.784
1630.0641
1640.441
1650.186
1660.124
1670.142
1680.114
1690.0129
170.155
180.0719
190.072
20.0501
200.247
210.468
220.18
230.0032
240.886
250.634
260.456
270.124
280.899
290.751
30.363
300.453
310.677
320.0325
330.776
340.333
350.798
360.235
370.15
380.56
390.439
40.208
400.316
410.408
420.823
430.199
440.665
450.323
460.109
470.789
480.932
490.472
50.357
500.768
510.744
520.00476
530.351
540.603
550.766
560.577
570.978
580.142
590.0635
60.967
600.00138
610.835
620.0736
630.205
640.82
650.058
660.00976
670.806
680.039
690.72
70.787
700.338
710.163
720.181
730.177
740.435
750.862
760.714
770.0911
780.56
790.327
80.477
800.0662
810.45
820.0935
830.575
840.528
850.00418
860.427
870.667
880.614
890.28
90.0861
900.492
910.00716
920.161
930.231
940.141
950.167
960.394
970.808
980.728
990.665



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11893


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
305 (carcinoma)
299 (adenocarcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002369 (adrenal gland)
0002100 (trunk)
0001851 (cortex)
0001235 (adrenal cortex)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0005172 (abdomen element)
0002530 (gland)
0006858 (adrenal/interrenal gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

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