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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=CAGE@SAMD00005228
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002334,CL:0002371,CL:0002582
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005228
|accession_numbers=CAGE;DRX008416;DRR009288;DRZ000713;DRZ002098;DRZ012063;DRZ013448
|accession_numbers_RNASeq=sRNA-Seq;DRX037121;DRR041487;DRZ007129
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002582
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000137,FF:0000143
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.94!96.91!PRRX1;;chr8:25902876..25902936,-!p1@EBF2!1.62!40.98!EBF2;;chr15:57511609..57511651,+!p2@TCF12!1.61!65.95!TCF12;;chr1:170633348..170633399,+!p2@PRRX1!1.56!47.72!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.44!71.20!OSR1;;chr1:170632477..170632506,+!p6@PRRX1!1.44!26.86!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.44!26.77!HOXC5;;chr12:66218255..66218304,+!p3@HMGA2!1.34!54.86!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!1.33!23.00!PRRX1;;chr2:102091144..102091183,-!p2@RFX8!1.33!20.45!RFX8;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.55!ZBED1;;chr1:170632723..170632739,+!p8@PRRX1!1.28!18.23!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!1.27!17.66!HOXC8;;chr11:65686802..65686818,+!p6@DRAP1!1.25!28.83!DRAP1;;chr2:239756671..239756732,+!p1@TWIST2!1.20!47.06!TWIST2;;chr6:1312325..1312340,+!p1@FOXQ1!1.20!24.15!FOXQ1;;chr1:170632959..170632987,+!p4@PRRX1!1.19!15.85!PRRX1;;chr6:34204921..34204939,+!p3@HMGA1!1.16!402.75!HMGA1;;chr17:59477233..59477263,+!p1@TBX2!1.16!41.15!TBX2;;chr1:170632250..170632277,+!p7@PRRX1!1.13!12.57!PRRX1;;chr10:131762504..131762555,-!p1@EBF3!1.13!12.57!EBF3;;chr7:19157248..19157268,-!p1@TWIST1!1.11!33.02!TWIST1;;chr1:170632439..170632465,+!p11@PRRX1!1.11!11.99!PRRX1;;chr12:66218598..66218645,+!p2@HMGA2!1.09!51.99!HMGA2;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.61!FOXC2;;chr4:174450089..174450153,-!p2@HAND2!1.06!10.43!HAND2;;chr12:66218212..66218244,+!p5@HMGA2!1.05!14.95!HMGA2;;chr12:54393880..54393962,+!p1@HOXC9!1.05!10.35!HOXC9;;chr16:86544113..86544145,+!p1@FOXF1!1.04!12.57!FOXF1;;chr12:66218183..66218209,+!p4@HMGA2!1.03!18.81!HMGA2;;chr2:239756739..239756755,+!p2@TWIST2!1.03!16.92!TWIST2;;chr17:1959369..1959388,+!p2@HIC1!1.02!25.21!HIC1;;chr19:13134772..13134822,+!p2@NFIX!1.02!14.21!NFIX;;chr1:170633058..170633084,+!p5@PRRX1!1.01!9.12!PRRX1;;chr4:26322267..26322334,+!p3@RBPJ!1.00!21.93!RBPJ;;chr11:65686732..65686756,+!p2@DRAP1!0.99!38.02!DRAP1;;chr2:102091566..102091581,-!p1@RFX8!0.98!8.62!RFX8;;chr9:132427883..132427951,+!p2@PRRX2!0.98!8.54!PRRX2;;chr2:176994408..176994492,+!p1@HOXD8!0.97!8.38!HOXD8;;chr4:111558135..111558198,-!p2@PITX2!0.97!8.29!PITX2;;chr9:132427972..132428056,+!p1@PRRX2!0.96!10.76!PRRX2;;chr11:65687222..65687240,+!p7@DRAP1!0.96!10.51!DRAP1;;chr7:14029283..14029311,-!p1@ETV1!0.95!43.45!ETV1;;chr5:133450365..133450444,+!p1@TCF7!0.95!37.45!TCF7;;chr11:65687362..65687436,+!p3@DRAP1!0.94!36.55!DRAP1;;chr17:46622070..46622109,-!p1@HOXB2!0.94!17.74!HOXB2;;chr12:54422217..54422239,+!p3@HOXC6!0.94!7.64!HOXC6;;chr1:170632137..170632172,+!p10@PRRX1!0.93!7.56!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.92!7.39!PRRX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.92!7.23!HOXC5;;chr11:46299539..46299620,+!p2@CREB3L1!0.91!12.40!CREB3L1;;chr17:46682321..46682362,-!p1@HOXB6!0.90!6.98!HOXB6;;chr1:158979872..158979898,+!p3@IFI16!0.89!21.85!IFI16;;chr1:170632683..170632696,+!p12@PRRX1!0.89!6.82!PRRX1;;chr4:174451370..174451387,-!p1@HAND2!0.89!6.82!HAND2;;chr11:46299199..46299233,+!p1@CREB3L1!0.88!36.05!CREB3L1;;chr1:170632647..170632659,+!p17@PRRX1!0.88!6.65!PRRX1;;chr1:170632115..170632136,+!p9@PRRX1!0.88!6.57!PRRX1;;chr17:46687959..46688007,-!p2@HOXB7!0.87!9.12!HOXB7;;chr17:46675420..46675465,-!p3@HOXB6!0.87!7.56!HOXB6;;chr1:158979792..158979814,+!p2@IFI16!0.86!63.48!IFI16;;chr12:66218836..66218888,+!p1@HMGA2!0.86!62.50!HMGA2;;chr5:2751762..2751784,-!p1@IRX2!0.85!6.16!IRX2;;chr7:27205136..27205164,-!p1@HOXA9!0.85!6.08!HOXA9;;chr8:49833948..49833973,-!p2@SNAI2!0.84!40.57!SNAI2;;chr17:46675558..46675577,-!p2@HOXB6!0.84!6.00!HOXB6;;chr5:158526917..158526932,-!p1@EBF1!0.83!15.19!EBF1;;chr17:46688334..46688385,-!p1@HOXB7!0.83!8.46!HOXB7;;chr9:1050331..1050363,+!p1@DMRT2!0.83!5.75!DMRT2;;chr7:19157043..19157088,-!p2@TWIST1!0.82!15.03!TWIST1;;chr7:14028488..14028516,-!p2@ETV1!0.82!6.24!ETV1;;chr11:65687243..65687276,+!p8@DRAP1!0.81!7.64!DRAP1;;chr3:12330560..12330579,+!p1@PPARG!0.81!6.41!PPARG;;chr17:46690839..46690884,-!p1@HOXB8!0.81!5.42!HOXB8;;chr12:115121962..115121987,-!p1@TBX3!0.79!47.55!TBX3;;chr12:27485762..27485776,+!p3@ARNTL2!0.79!14.70!ARNTL2;;chr12:54402790..54402805,+!p2@HOXC8!0.79!5.17!HOXC8;;chr11:65667884..65667895,-!p2@FOSL1!0.78!20.94!FOSL1;;chr3:141121847..141121868,+!p5@ZBTB38!0.78!7.97!ZBTB38;;chr12:54410948..54410992,+!p3@HOXC5!0.78!5.01!HOXC5;;chr12:53614115..53614154,-!p1@RARG!0.77!28.66!RARG;;chr15:83953397..83953425,-!p1@BNC1!0.77!5.75!BNC1;;chr5:72744594..72744609,-!p1@FOXD1!0.76!23.73!FOXD1;;chr20:42543441..42543497,+!p1@TOX2!0.76!23.32!TOX2;;chr15:96874145..96874166,+!p7@NR2F2!0.76!9.69!NR2F2;;chr15:96875041..96875052,+!p17@NR2F2!0.76!7.15!NR2F2;;chr7:44143925..44143970,+!p1@AEBP1!0.75!115.39!AEBP1;;chr18:53068911..53068935,-!p4@TCF4!0.75!5.34!TCF4;;chr7:27196267..27196311,-!p1@HOXA7!0.75!4.68!HOXA7;;chr1:44513995..44514031,+!p1@KLF17!0.75!4.60!KLF17;;chr17:46622114..46622138,-!p4@HOXB2!0.74!7.23!HOXB2;;chr3:21792682..21792720,-!p1@ZNF385D!0.74!4.43!ZNF385D;;chr2:74741569..74741620,+!p1@TLX2!0.73!4.35!TLX2;;chr1:170633245..170633256,+!p14@PRRX1!0.73!4.35!PRRX1;;chr5:321810..321877,+!p1@AHRR!0.72!14.70!AHRR;;chr15:96869114..96869160,+!p11@NR2F2!0.72!6.08!NR2F2;;chr17:59477275..59477286,+!p3@TBX2!0.72!5.91!TBX2;;chr12:54447637..54447659,+!p4@HOXC4!0.72!4.27!HOXC4;;chr15:57511589..57511608,+!p4@TCF12!0.72!4.19!TCF12;;chr2:119604456..119604501,-!p2@EN1!0.72!4.19!EN1;;chr6:1389789..1389821,+!p1@FOXF2!0.70!5.83!FOXF2;;chr12:54394309..54394336,+!p2@HOXC9!0.70!4.02!HOXC9;;chr8:49833978..49833996,-!p1@SNAI2!0.69!92.15!SNAI2;;chr11:65686776..65686787,+!p9@DRAP1!0.69!4.76!DRAP1;;chr10:131762385..131762398,-!p4@EBF3!0.69!3.94!EBF3;;chr12:54380036..54380091,+!p4@HOXC10!0.69!3.94!HOXC10;;chr12:85673977..85674015,+!p1@ALX1!0.69!3.94!ALX1;;chr12:54380404..54380433,+!p3@HOXC10!0.69!3.86!HOXC10;;chr11:65687158..65687216,+!p4@DRAP1!0.68!24.72!DRAP1;;chr20:42543506..42543549,+!p2@TOX2!0.68!9.94!TOX2;;chr3:21792585..21792625,-!p2@ZNF385D!0.68!4.27!ZNF385D;;chr14:73360799..73360817,-!p1@DPF3!0.67!14.45!DPF3;;chr15:96874244..96874259,+!p5@NR2F2!0.67!9.77!NR2F2;;chr2:200322654..200322707,-!p2@SATB2!0.67!5.67!SATB2;;chr12:115122318..115122331,-!p2@TBX3!0.67!3.70!TBX3;;chr15:96874012..96874042,+!p2@NR2F2!0.66!37.12!NR2F2;;chr15:96876966..96877017,+!p12@NR2F2!0.66!5.50!NR2F2;;chr7:14029312..14029325,-!p4@ETV1!0.66!4.60!ETV1;;chr3:157823517..157823562,-!p1@SHOX2!0.66!3.86!SHOX2;;chr4:111544219..111544240,-!p1@PITX2!0.66!3.61!PITX2;;chr18:52969844..52969895,-!p27@TCF4!0.66!3.61!TCF4;;chr10:119303078..119303169,+!p2@EMX2!0.66!3.53!EMX2;;chr11:65667846..65667868,-!p1@FOSL1!0.65!106.93!FOSL1;;chr15:96869255..96869291,+!p6@NR2F2!0.65!6.90!NR2F2;;chr15:42749722..42749739,-!p2@ZFP106!0.65!6.82!ZFP106;;chr15:67430351..67430366,+!p10@SMAD3!0.65!3.45!SMAD3;;chr8:22550982..22550999,-!p1@EGR3!0.64!10.84!EGR3;;chr1:158979851..158979865,+!p5@IFI16!0.64!8.29!IFI16;;chr5:72744445..72744466,-!p2@FOXD1!0.64!6.00!FOXD1;;chr11:120107344..120107351,+!p1@POU2F3!0.64!4.19!POU2F3;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.37!HMGA2;;chr3:21792631..21792665,-!p3@ZNF385D!0.64!3.37!ZNF385D;;chr7:27205106..27205134,-!p2@HOXA9!0.64!3.37!HOXA9;;chr19:45260775..45260838,+!p5@BCL3!0.63!4.43!BCL3;;chr17:1958388..1958404,+!p1@HIC1!0.62!23.65!HIC1;;chr17:59477197..59477212,+!p2@TBX2!0.62!5.91!TBX2;;chr19:31840130..31840160,-!p2@TSHZ3!0.62!5.26!TSHZ3;;chr12:54447599..54447630,+!p3@HOXC4!0.62!4.02!HOXC4;;chr5:137804484..137804498,+!p2@EGR1!0.61!14.37!EGR1;;chr18:52989031..52989079,-!p2@TCF4!0.61!8.13!TCF4;;chr12:66218378..66218401,+!p6@HMGA2!0.61!5.17!HMGA2;;chr1:170632867..170632878,+!p21@PRRX1!0.61!3.12!PRRX1;;chr19:47523058..47523114,+!p1@NPAS1!0.61!3.04!NPAS1;;chr1:170633225..170633230,+!p25@PRRX1!0.61!3.04!PRRX1;;chr22:19748231..19748317,+!p1@TBX1!0.61!3.04!TBX1;;chr4:26322373..26322393,+!p4@RBPJ!0.60!4.76!RBPJ;;chr12:66218573..66218596,+!p7@HMGA2!0.60!4.76!HMGA2;;chr17:46622205..46622218,-!p3@HOXB2!0.60!3.53!HOXB2;;chr2:102091478..102091490,-!p3@RFX8!0.60!2.96!RFX8;;chr12:115121802..115121814,-!p5@TBX3!0.60!2.96!TBX3;;chr1:170633100..170633112,+!p19@PRRX1!0.60!2.96!PRRX1;;chr21:36260295..36260310,-!p3@RUNX1!0.59!5.17!RUNX1;;chr1:170632310..170632321,+!p15@PRRX1!0.59!2.87!PRRX1;;chr7:27196217..27196246,-!p2@HOXA7!0.59!2.87!HOXA7;;chr8:93074803..93074845,-!p1@RUNX1T1!0.59!2.87!RUNX1T1;;chr12:54402729..54402743,+!p3@HOXC8!0.59!2.87!HOXC8;;chr4:26322419..26322479,+!p2@RBPJ!0.58!41.72!RBPJ;;chr4:4861385..4861398,+!p1@MSX1!0.58!9.69!MSX1;;chr12:66218152..66218174,+!p10@HMGA2!0.58!3.04!HMGA2;;chr12:115121770..115121781,-!p4@TBX3!0.58!2.79!TBX3;;chr17:46621146..46621180,-!p10@HOXB2!0.58!2.79!HOXB2;;chr6:34204973..34204990,+!p4@HMGA1!0.57!44.60!HMGA1;;chr1:59249732..59249749,-!p2@JUN!0.57!41.06!JUN;;chr6:31126291..31126399,+!p1@TCF19!0.57!32.03!TCF19;;chr10:131762410..131762436,-!p2@EBF3!0.57!2.71!EBF3;;chr17:46671108..46671147,-!p1@HOXB5!0.57!2.71!HOXB5;;chr2:19558327..19558334,-!p2@OSR1!0.57!2.71!OSR1;;chr3:71114066..71114114,-!p1@FOXP1!0.56!68.00!FOXP1;;chr15:96873861..96873872,+!p9@NR2F2!0.56!6.24!NR2F2;;chr7:27192185..27192209,-!p1@HOXA3!0.56!2.63!HOXA3;;chr8:93074848..93074871,-!p3@RUNX1T1!0.56!2.63!RUNX1T1;;chr1:170632907..170632916,+!p22@PRRX1!0.56!2.63!PRRX1;;chr8:77593474..77593612,+!p1@ZFHX4!0.55!13.22!ZFHX4;;chr14:61116183..61116208,-!p1@SIX1!0.55!11.74!SIX1;;chr2:200323414..200323455,-!p1@SATB2!0.55!6.32!SATB2;;chr7:137686763..137686784,-!p5@CREB3L2!0.55!5.01!CREB3L2;;chr21:36260343..36260402,-!p6@RUNX1!0.55!4.52!RUNX1;;chr7:15726243..15726293,-!p2@MEOX2!0.55!2.55!MEOX2;;chr7:15726296..15726315,-!p1@MEOX2!0.55!2.55!MEOX2;;chr17:46691732..46691766,-!p4@HOXB8!0.55!2.55!HOXB8;;chr4:26323764..26323821,+!p15@RBPJ!0.55!2.55!RBPJ;;chr12:54426831..54426836,+!p10@HOXC5!0.55!2.55!HOXC5;;chr14:62162258..62162269,+!p2@HIF1A!0.54!30.06!HIF1A;;chr8:106330656..106330684,+!p1@ZFPM2!0.54!7.72!ZFPM2;;chr12:54394059..54394088,+!p3@HOXC9!0.54!2.46!HOXC9;;chr17:46675586..46675600,-!p6@HOXB6!0.54!2.46!HOXB6;;chr17:59477403..59477414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|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.94!96.91!PRRX1;;chr8:25902876..25902936,-!p1@EBF2!1.62!40.98!EBF2;;chr15:57511609..57511651,+!p2@TCF12!1.61!65.95!TCF12;;chr1:170633348..170633399,+!p2@PRRX1!1.56!47.72!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.44!71.20!OSR1;;chr1:170632477..170632506,+!p6@PRRX1!1.44!26.86!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.44!26.77!HOXC5;;chr12:66218255..66218304,+!p3@HMGA2!1.34!54.86!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!1.33!23.00!PRRX1;;chr2:102091144..102091183,-!p2@RFX8!1.33!20.45!RFX8;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.55!ZBED1;;chr1:170632723..170632739,+!p8@PRRX1!1.28!18.23!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!1.27!17.66!HOXC8;;chr11:65686802..65686818,+!p6@DRAP1!1.25!28.83!DRAP1;;chr2:239756671..239756732,+!p1@TWIST2!1.20!47.06!TWIST2;;chr6:1312325..1312340,+!p1@FOXQ1!1.20!24.15!FOXQ1;;chr1:170632959..170632987,+!p4@PRRX1!1.19!15.85!PRRX1;;chr6:34204921..34204939,+!p3@HMGA1!1.16!402.75!HMGA1;;chr17:59477233..59477263,+!p1@TBX2!1.16!41.15!TBX2;;chr1:170632250..170632277,+!p7@PRRX1!1.13!12.57!PRRX1;;chr10:131762504..131762555,-!p1@EBF3!1.13!12.57!EBF3;;chr7:19157248..19157268,-!p1@TWIST1!1.11!33.02!TWIST1;;chr1:170632439..170632465,+!p11@PRRX1!1.11!11.99!PRRX1;;chr12:66218598..66218645,+!p2@HMGA2!1.09!51.99!HMGA2;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.61!FOXC2;;chr4:174450089..174450153,-!p2@HAND2!1.06!10.43!HAND2;;chr12:66218212..66218244,+!p5@HMGA2!1.05!14.95!HMGA2;;chr12:54393880..54393962,+!p1@HOXC9!1.05!10.35!HOXC9;;chr16:86544113..86544145,+!p1@FOXF1!1.04!12.57!FOXF1;;chr12:66218183..66218209,+!p4@HMGA2!1.03!18.81!HMGA2;;chr2:239756739..239756755,+!p2@TWIST2!1.03!16.92!TWIST2;;chr17:1959369..1959388,+!p2@HIC1!1.02!25.21!HIC1;;chr19:13134772..13134822,+!p2@NFIX!1.02!14.21!NFIX;;chr1:170633058..170633084,+!p5@PRRX1!1.01!9.12!PRRX1;;chr4:26322267..26322334,+!p3@RBPJ!1.00!21.93!RBPJ;;chr11:65686732..65686756,+!p2@DRAP1!0.99!38.02!DRAP1;;chr2:102091566..102091581,-!p1@RFX8!0.98!8.62!RFX8;;chr9:132427883..132427951,+!p2@PRRX2!0.98!8.54!PRRX2;;chr2:176994408..176994492,+!p1@HOXD8!0.97!8.38!HOXD8;;chr4:111558135..111558198,-!p2@PITX2!0.97!8.29!PITX2;;chr9:132427972..132428056,+!p1@PRRX2!0.96!10.76!PRRX2;;chr11:65687222..65687240,+!p7@DRAP1!0.96!10.51!DRAP1;;chr7:14029283..14029311,-!p1@ETV1!0.95!43.45!ETV1;;chr5:133450365..133450444,+!p1@TCF7!0.95!37.45!TCF7;;chr11:65687362..65687436,+!p3@DRAP1!0.94!36.55!DRAP1;;chr17:46622070..46622109,-!p1@HOXB2!0.94!17.74!HOXB2;;chr12:54422217..54422239,+!p3@HOXC6!0.94!7.64!HOXC6;;chr1:170632137..170632172,+!p10@PRRX1!0.93!7.56!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.92!7.39!PRRX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.92!7.23!HOXC5;;chr11:46299539..46299620,+!p2@CREB3L1!0.91!12.40!CREB3L1;;chr17:46682321..46682362,-!p1@HOXB6!0.90!6.98!HOXB6;;chr1:158979872..158979898,+!p3@IFI16!0.89!21.85!IFI16;;chr1:170632683..170632696,+!p12@PRRX1!0.89!6.82!PRRX1;;chr4:174451370..174451387,-!p1@HAND2!0.89!6.82!HAND2;;chr11:46299199..46299233,+!p1@CREB3L1!0.88!36.05!CREB3L1;;chr1:170632647..170632659,+!p17@PRRX1!0.88!6.65!PRRX1;;chr1:170632115..170632136,+!p9@PRRX1!0.88!6.57!PRRX1;;chr17:46687959..46688007,-!p2@HOXB7!0.87!9.12!HOXB7;;chr17:46675420..46675465,-!p3@HOXB6!0.87!7.56!HOXB6;;chr1:158979792..158979814,+!p2@IFI16!0.86!63.48!IFI16;;chr12:66218836..66218888,+!p1@HMGA2!0.86!62.50!HMGA2;;chr5:2751762..2751784,-!p1@IRX2!0.85!6.16!IRX2;;chr7:27205136..27205164,-!p1@HOXA9!0.85!6.08!HOXA9;;chr8:49833948..49833973,-!p2@SNAI2!0.84!40.57!SNAI2;;chr17:46675558..46675577,-!p2@HOXB6!0.84!6.00!HOXB6;;chr5:158526917..158526932,-!p1@EBF1!0.83!15.19!EBF1;;chr17:46688334..46688385,-!p1@HOXB7!0.83!8.46!HOXB7;;chr9:1050331..1050363,+!p1@DMRT2!0.83!5.75!DMRT2;;chr7:19157043..19157088,-!p2@TWIST1!0.82!15.03!TWIST1;;chr7:14028488..14028516,-!p2@ETV1!0.82!6.24!ETV1;;chr11:65687243..65687276,+!p8@DRAP1!0.81!7.64!DRAP1;;chr3:12330560..12330579,+!p1@PPARG!0.81!6.41!PPARG;;chr17:46690839..46690884,-!p1@HOXB8!0.81!5.42!HOXB8;;chr12:115121962..115121987,-!p1@TBX3!0.79!47.55!TBX3;;chr12:27485762..27485776,+!p3@ARNTL2!0.79!14.70!ARNTL2;;chr12:54402790..54402805,+!p2@HOXC8!0.79!5.17!HOXC8;;chr11:65667884..65667895,-!p2@FOSL1!0.78!20.94!FOSL1;;chr3:141121847..141121868,+!p5@ZBTB38!0.78!7.97!ZBTB38;;chr12:54410948..54410992,+!p3@HOXC5!0.78!5.01!HOXC5;;chr12:53614115..53614154,-!p1@RARG!0.77!28.66!RARG;;chr15:83953397..83953425,-!p1@BNC1!0.77!5.75!BNC1;;chr5:72744594..72744609,-!p1@FOXD1!0.76!23.73!FOXD1;;chr20:42543441..42543497,+!p1@TOX2!0.76!23.32!TOX2;;chr15:96874145..96874166,+!p7@NR2F2!0.76!9.69!NR2F2;;chr15:96875041..96875052,+!p17@NR2F2!0.76!7.15!NR2F2;;chr7:44143925..44143970,+!p1@AEBP1!0.75!115.39!AEBP1;;chr18:53068911..53068935,-!p4@TCF4!0.75!5.34!TCF4;;chr7:27196267..27196311,-!p1@HOXA7!0.75!4.68!HOXA7;;chr1:44513995..44514031,+!p1@KLF17!0.75!4.60!KLF17;;chr17:46622114..46622138,-!p4@HOXB2!0.74!7.23!HOXB2;;chr3:21792682..21792720,-!p1@ZNF385D!0.74!4.43!ZNF385D;;chr2:74741569..74741620,+!p1@TLX2!0.73!4.35!TLX2;;chr1:170633245..170633256,+!p14@PRRX1!0.73!4.35!PRRX1;;chr5:321810..321877,+!p1@AHRR!0.72!14.70!AHRR;;chr15:96869114..96869160,+!p11@NR2F2!0.72!6.08!NR2F2;;chr17:59477275..59477286,+!p3@TBX2!0.72!5.91!TBX2;;chr12:54447637..54447659,+!p4@HOXC4!0.72!4.27!HOXC4;;chr15:57511589..57511608,+!p4@TCF12!0.72!4.19!TCF12;;chr2:119604456..119604501,-!p2@EN1!0.72!4.19!EN1;;chr6:1389789..1389821,+!p1@FOXF2!0.70!5.83!FOXF2;;chr12:54394309..54394336,+!p2@HOXC9!0.70!4.02!HOXC9;;chr8:49833978..49833996,-!p1@SNAI2!0.69!92.15!SNAI2;;chr11:65686776..65686787,+!p9@DRAP1!0.69!4.76!DRAP1;;chr10:131762385..131762398,-!p4@EBF3!0.69!3.94!EBF3;;chr12:54380036..54380091,+!p4@HOXC10!0.69!3.94!HOXC10;;chr12:85673977..85674015,+!p1@ALX1!0.69!3.94!ALX1;;chr12:54380404..54380433,+!p3@HOXC10!0.69!3.86!HOXC10;;chr11:65687158..65687216,+!p4@DRAP1!0.68!24.72!DRAP1;;chr20:42543506..42543549,+!p2@TOX2!0.68!9.94!TOX2;;chr3:21792585..21792625,-!p2@ZNF385D!0.68!4.27!ZNF385D;;chr14:73360799..73360817,-!p1@DPF3!0.67!14.45!DPF3;;chr15:96874244..96874259,+!p5@NR2F2!0.67!9.77!NR2F2;;chr2:200322654..200322707,-!p2@SATB2!0.67!5.67!SATB2;;chr12:115122318..115122331,-!p2@TBX3!0.67!3.70!TBX3;;chr15:96874012..96874042,+!p2@NR2F2!0.66!37.12!NR2F2;;chr15:96876966..96877017,+!p12@NR2F2!0.66!5.50!NR2F2;;chr7:14029312..14029325,-!p4@ETV1!0.66!4.60!ETV1;;chr3:157823517..157823562,-!p1@SHOX2!0.66!3.86!SHOX2;;chr4:111544219..111544240,-!p1@PITX2!0.66!3.61!PITX2;;chr18:52969844..52969895,-!p27@TCF4!0.66!3.61!TCF4;;chr10:119303078..119303169,+!p2@EMX2!0.66!3.53!EMX2;;chr11:65667846..65667868,-!p1@FOSL1!0.65!106.93!FOSL1;;chr15:96869255..96869291,+!p6@NR2F2!0.65!6.90!NR2F2;;chr15:42749722..42749739,-!p2@ZFP106!0.65!6.82!ZFP106;;chr15:67430351..67430366,+!p10@SMAD3!0.65!3.45!SMAD3;;chr8:22550982..22550999,-!p1@EGR3!0.64!10.84!EGR3;;chr1:158979851..158979865,+!p5@IFI16!0.64!8.29!IFI16;;chr5:72744445..72744466,-!p2@FOXD1!0.64!6.00!FOXD1;;chr11:120107344..120107351,+!p1@POU2F3!0.64!4.19!POU2F3;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.37!HMGA2;;chr3:21792631..21792665,-!p3@ZNF385D!0.64!3.37!ZNF385D;;chr7:27205106..27205134,-!p2@HOXA9!0.64!3.37!HOXA9;;chr19:45260775..45260838,+!p5@BCL3!0.63!4.43!BCL3;;chr17:1958388..1958404,+!p1@HIC1!0.62!23.65!HIC1;;chr17:59477197..59477212,+!p2@TBX2!0.62!5.91!TBX2;;chr19:31840130..31840160,-!p2@TSHZ3!0.62!5.26!TSHZ3;;chr12:54447599..54447630,+!p3@HOXC4!0.62!4.02!HOXC4;;chr5:137804484..137804498,+!p2@EGR1!0.61!14.37!EGR1;;chr18:52989031..52989079,-!p2@TCF4!0.61!8.13!TCF4;;chr12:66218378..66218401,+!p6@HMGA2!0.61!5.17!HMGA2;;chr1:170632867..170632878,+!p21@PRRX1!0.61!3.12!PRRX1;;chr19:47523058..47523114,+!p1@NPAS1!0.61!3.04!NPAS1;;chr1:170633225..170633230,+!p25@PRRX1!0.61!3.04!PRRX1;;chr22:19748231..19748317,+!p1@TBX1!0.61!3.04!TBX1;;chr4:26322373..26322393,+!p4@RBPJ!0.60!4.76!RBPJ;;chr12:66218573..66218596,+!p7@HMGA2!0.60!4.76!HMGA2;;chr17:46622205..46622218,-!p3@HOXB2!0.60!3.53!HOXB2;;chr2:102091478..102091490,-!p3@RFX8!0.60!2.96!RFX8;;chr12:115121802..115121814,-!p5@TBX3!0.60!2.96!TBX3;;chr1:170633100..170633112,+!p19@PRRX1!0.60!2.96!PRRX1;;chr21:36260295..36260310,-!p3@RUNX1!0.59!5.17!RUNX1;;chr1:170632310..170632321,+!p15@PRRX1!0.59!2.87!PRRX1;;chr7:27196217..27196246,-!p2@HOXA7!0.59!2.87!HOXA7;;chr8:93074803..93074845,-!p1@RUNX1T1!0.59!2.87!RUNX1T1;;chr12:54402729..54402743,+!p3@HOXC8!0.59!2.87!HOXC8;;chr4:26322419..26322479,+!p2@RBPJ!0.58!41.72!RBPJ;;chr4:4861385..4861398,+!p1@MSX1!0.58!9.69!MSX1;;chr12:66218152..66218174,+!p10@HMGA2!0.58!3.04!HMGA2;;chr12:115121770..115121781,-!p4@TBX3!0.58!2.79!TBX3;;chr17:46621146..46621180,-!p10@HOXB2!0.58!2.79!HOXB2;;chr6:34204973..34204990,+!p4@HMGA1!0.57!44.60!HMGA1;;chr1:59249732..59249749,-!p2@JUN!0.57!41.06!JUN;;chr6:31126291..31126399,+!p1@TCF19!0.57!32.03!TCF19;;chr10:131762410..131762436,-!p2@EBF3!0.57!2.71!EBF3;;chr17:46671108..46671147,-!p1@HOXB5!0.57!2.71!HOXB5;;chr2:19558327..19558334,-!p2@OSR1!0.57!2.71!OSR1;;chr3:71114066..71114114,-!p1@FOXP1!0.56!68.00!FOXP1;;chr15:96873861..96873872,+!p9@NR2F2!0.56!6.24!NR2F2;;chr7:27192185..27192209,-!p1@HOXA3!0.56!2.63!HOXA3;;chr8:93074848..93074871,-!p3@RUNX1T1!0.56!2.63!RUNX1T1;;chr1:170632907..170632916,+!p22@PRRX1!0.56!2.63!PRRX1;;chr8:77593474..77593612,+!p1@ZFHX4!0.55!13.22!ZFHX4;;chr14:61116183..61116208,-!p1@SIX1!0.55!11.74!SIX1;;chr2:200323414..200323455,-!p1@SATB2!0.55!6.32!SATB2;;chr7:137686763..137686784,-!p5@CREB3L2!0.55!5.01!CREB3L2;;chr21:36260343..36260402,-!p6@RUNX1!0.55!4.52!RUNX1;;chr7:15726243..15726293,-!p2@MEOX2!0.55!2.55!MEOX2;;chr7:15726296..15726315,-!p1@MEOX2!0.55!2.55!MEOX2;;chr17:46691732..46691766,-!p4@HOXB8!0.55!2.55!HOXB8;;chr4:26323764..26323821,+!p15@RBPJ!0.55!2.55!RBPJ;;chr12:54426831..54426836,+!p10@HOXC5!0.55!2.55!HOXC5;;chr14:62162258..62162269,+!p2@HIF1A!0.54!30.06!HIF1A;;chr8:106330656..106330684,+!p1@ZFPM2!0.54!7.72!ZFPM2;;chr12:54394059..54394088,+!p3@HOXC9!0.54!2.46!HOXC9;;chr17:46675586..46675600,-!p6@HOXB6!0.54!2.46!HOXB6;;chr17:59477403..59477414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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002334;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002582
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|fonse_cell_line_closure=
Line 35: Line 44:
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|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520visceral%252c%2520donor1.CNhs11082.11280-116I2.hg38.nobarcode.bam
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|id=FF:11280-116I2
|is_a=EFO:0002091;;FF:0000002;;FF:0000143;;FF:0000210
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|is_obsolete=
|library_id=CNhs11082
|library_id_phase_based=2:CNhs11082
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11280
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10008.CCGTCC.11280
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11280
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10008.CCGTCC.11280
|name=Preadipocyte - visceral, donor1
|name=Preadipocyte - visceral, donor1
|namespace=FANTOM5
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Line 42: Line 65:
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|rna_box=116
|rna_box=116
|rna_catalog_number=CA802s-R10a
|rna_catalog_number=CA802s-R10a
Line 56: Line 82:
|rna_tube_id=116I2
|rna_tube_id=116I2
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10008.CCGTCC
|sample_age=56
|sample_age=56
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 69: Line 97:
|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.09913090161598e-240!GO:0043226;organelle;1.77627529162782e-192!GO:0043229;intracellular organelle;2.94981761137497e-192!GO:0043231;intracellular membrane-bound organelle;1.79276216875281e-191!GO:0043227;membrane-bound organelle;4.50768942347005e-191!GO:0005737;cytoplasm;4.24732424895643e-183!GO:0044422;organelle part;2.82078825483509e-147!GO:0044446;intracellular organelle part;6.39749304203589e-146!GO:0044444;cytoplasmic part;3.66408506827978e-129!GO:0032991;macromolecular complex;2.88863330741651e-103!GO:0030529;ribonucleoprotein complex;4.7843171944437e-89!GO:0044238;primary metabolic process;1.81094314161466e-86!GO:0044237;cellular metabolic process;8.52638817906775e-86!GO:0043170;macromolecule metabolic process;1.2821955604836e-82!GO:0005515;protein binding;1.02812302035644e-80!GO:0005634;nucleus;1.28790163341894e-79!GO:0043233;organelle lumen;3.35938100591664e-77!GO:0031974;membrane-enclosed lumen;3.35938100591664e-77!GO:0044428;nuclear part;4.48281757808683e-77!GO:0003723;RNA binding;1.55736446956449e-70!GO:0005739;mitochondrion;1.48860694016477e-64!GO:0016043;cellular component organization and biogenesis;5.85723703071027e-52!GO:0005840;ribosome;5.85723703071027e-52!GO:0043234;protein complex;1.44411346264851e-51!GO:0006396;RNA processing;2.44182685530861e-51!GO:0006412;translation;1.64226809708903e-50!GO:0019538;protein metabolic process;8.99859221186169e-49!GO:0031090;organelle membrane;1.98303992988104e-47!GO:0031981;nuclear lumen;1.42742385246756e-45!GO:0003735;structural constituent of ribosome;1.85964509947286e-45!GO:0043283;biopolymer metabolic process;1.98201651546553e-45!GO:0015031;protein transport;1.50179482691325e-43!GO:0044429;mitochondrial part;2.55904747361372e-43!GO:0033036;macromolecule localization;7.52624169417403e-43!GO:0044260;cellular macromolecule metabolic process;1.14769159519155e-42!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.34044700889196e-42!GO:0044267;cellular protein metabolic process;8.12224904549968e-42!GO:0010467;gene expression;2.67841900794544e-41!GO:0045184;establishment of protein localization;2.47935286061954e-40!GO:0031967;organelle envelope;2.49244062764204e-39!GO:0008104;protein localization;3.86936343605203e-39!GO:0031975;envelope;4.7999788508868e-39!GO:0033279;ribosomal subunit;5.72397819154966e-39!GO:0009058;biosynthetic process;7.57777998654191e-39!GO:0005829;cytosol;1.0646372998218e-38!GO:0016071;mRNA metabolic process;1.37693918318227e-38!GO:0009059;macromolecule biosynthetic process;1.80412460969316e-38!GO:0044249;cellular biosynthetic process;1.12570805880436e-37!GO:0046907;intracellular transport;1.02750774692307e-36!GO:0008380;RNA splicing;1.15470924958574e-36!GO:0043228;non-membrane-bound organelle;3.0176279630679e-36!GO:0043232;intracellular non-membrane-bound organelle;3.0176279630679e-36!GO:0006996;organelle organization and biogenesis;2.02502153735256e-34!GO:0006397;mRNA processing;5.60265339565203e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.40491412544669e-33!GO:0065003;macromolecular complex assembly;3.26799938391282e-33!GO:0022607;cellular component assembly;1.28085678322286e-30!GO:0006886;intracellular protein transport;4.09793258776091e-30!GO:0006259;DNA metabolic process;2.26010255319804e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.83272640292577e-27!GO:0005740;mitochondrial envelope;2.91011208642457e-27!GO:0005654;nucleoplasm;1.19902115765958e-26!GO:0005681;spliceosome;1.91215665981059e-26!GO:0007049;cell cycle;3.47336382208385e-26!GO:0031966;mitochondrial membrane;2.08027146232447e-25!GO:0003676;nucleic acid binding;1.33668071696299e-24!GO:0019866;organelle inner membrane;1.70422229241386e-24!GO:0051649;establishment of cellular localization;2.27687742598408e-23!GO:0051641;cellular localization;3.69724635827121e-23!GO:0005743;mitochondrial inner membrane;6.63269142833694e-23!GO:0044445;cytosolic part;1.29918825203907e-21!GO:0044451;nucleoplasm part;2.45518272259252e-21!GO:0006119;oxidative phosphorylation;3.78716287132035e-21!GO:0016462;pyrophosphatase activity;3.80082689900221e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.68939104369196e-21!GO:0006457;protein folding;6.66158692674128e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;7.83839876447729e-21!GO:0000166;nucleotide binding;1.07977211909565e-20!GO:0015934;large ribosomal subunit;1.80131193977419e-20!GO:0000278;mitotic cell cycle;1.85208773547618e-20!GO:0017111;nucleoside-triphosphatase activity;1.93141317236508e-20!GO:0005730;nucleolus;2.41787515746518e-20!GO:0022402;cell cycle process;3.97224277907014e-20!GO:0012505;endomembrane system;1.54447301813394e-19!GO:0044455;mitochondrial membrane part;1.54447301813394e-19!GO:0015935;small ribosomal subunit;2.2901534276319e-19!GO:0031980;mitochondrial lumen;7.0962861969133e-19!GO:0005759;mitochondrial matrix;7.0962861969133e-19!GO:0005783;endoplasmic reticulum;1.40821207405127e-18!GO:0022618;protein-RNA complex assembly;2.0848981171935e-18!GO:0006974;response to DNA damage stimulus;4.24172753961947e-18!GO:0048770;pigment granule;4.41670673759211e-18!GO:0042470;melanosome;4.41670673759211e-18!GO:0016070;RNA metabolic process;4.74450021482466e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;4.80229111811005e-17!GO:0043285;biopolymer catabolic process;6.405374601098e-17!GO:0005694;chromosome;8.01856558302584e-17!GO:0006512;ubiquitin cycle;8.41075806831792e-17!GO:0000502;proteasome complex (sensu Eukaryota);8.41075806831792e-17!GO:0044265;cellular macromolecule catabolic process;8.41075806831792e-17!GO:0019941;modification-dependent protein catabolic process;9.60448214463369e-17!GO:0043632;modification-dependent macromolecule catabolic process;9.60448214463369e-17!GO:0016874;ligase activity;9.67697802440026e-17!GO:0044257;cellular protein catabolic process;1.5073113256058e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.94806371643012e-16!GO:0000087;M phase of mitotic cell cycle;3.89518654070051e-16!GO:0042254;ribosome biogenesis and assembly;5.87313760565402e-16!GO:0008135;translation factor activity, nucleic acid binding;7.01704255938659e-16!GO:0007067;mitosis;7.30771768728097e-16!GO:0044432;endoplasmic reticulum part;1.00917687393492e-15!GO:0005746;mitochondrial respiratory chain;1.17280851593135e-15!GO:0005794;Golgi apparatus;1.26007423069957e-15!GO:0005761;mitochondrial ribosome;1.2690145120022e-15!GO:0000313;organellar ribosome;1.2690145120022e-15!GO:0051186;cofactor metabolic process;1.36892811799891e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.48811868392401e-15!GO:0008134;transcription factor binding;1.66816742605506e-15!GO:0009057;macromolecule catabolic process;2.31627509114495e-15!GO:0030163;protein catabolic process;2.44304836771314e-15!GO:0048193;Golgi vesicle transport;2.83612697636029e-15!GO:0022403;cell cycle phase;3.13503798082958e-15!GO:0006605;protein targeting;4.69406719082682e-15!GO:0044427;chromosomal part;6.371874796188e-15!GO:0006281;DNA repair;1.51373279850148e-14!GO:0051301;cell division;2.97531421755022e-14!GO:0032553;ribonucleotide binding;3.06086920805907e-14!GO:0032555;purine ribonucleotide binding;3.06086920805907e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.47246489684053e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.66342362811986e-14!GO:0003954;NADH dehydrogenase activity;3.66342362811986e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.66342362811986e-14!GO:0051082;unfolded protein binding;4.66824101815634e-14!GO:0017076;purine nucleotide binding;4.86278236842082e-14!GO:0044248;cellular catabolic process;1.09722707839086e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;1.49929061207513e-13!GO:0000375;RNA splicing, via transesterification reactions;1.49929061207513e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.49929061207513e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.62568159370795e-13!GO:0006260;DNA replication;1.66865364668523e-13!GO:0009719;response to endogenous stimulus;3.69849244743107e-13!GO:0000279;M phase;5.38643085241517e-13!GO:0005793;ER-Golgi intermediate compartment;8.10037152584759e-13!GO:0005635;nuclear envelope;1.54594118016148e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.62973858578997e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.78815944865362e-12!GO:0042773;ATP synthesis coupled electron transport;1.78815944865362e-12!GO:0005524;ATP binding;2.279193209322e-12!GO:0003743;translation initiation factor activity;2.31458800590074e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.76156678819633e-12!GO:0045271;respiratory chain complex I;2.76156678819633e-12!GO:0005747;mitochondrial respiratory chain complex I;2.76156678819633e-12!GO:0006732;coenzyme metabolic process;4.21544085422416e-12!GO:0016192;vesicle-mediated transport;5.41666738452974e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.15594209857009e-12!GO:0032559;adenyl ribonucleotide binding;6.77195456464832e-12!GO:0031965;nuclear membrane;8.32572237279299e-12!GO:0006413;translational initiation;1.00685686192811e-11!GO:0051276;chromosome organization and biogenesis;1.06049667149292e-11!GO:0044453;nuclear membrane part;1.1337625905819e-11!GO:0009259;ribonucleotide metabolic process;1.38514223883736e-11!GO:0030554;adenyl nucleotide binding;1.54723957428313e-11!GO:0043412;biopolymer modification;3.51003572819798e-11!GO:0016604;nuclear body;3.74219627975686e-11!GO:0006163;purine nucleotide metabolic process;4.20654854548912e-11!GO:0006913;nucleocytoplasmic transport;9.5842458561394e-11!GO:0000074;regulation of progression through cell cycle;9.82424233686032e-11!GO:0051726;regulation of cell cycle;1.06286187809757e-10!GO:0006446;regulation of translational initiation;1.11505389083868e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.13965159831424e-10!GO:0016887;ATPase activity;1.15078181699017e-10!GO:0006399;tRNA metabolic process;1.49428871265066e-10!GO:0006364;rRNA processing;1.76968575440332e-10!GO:0009150;purine ribonucleotide metabolic process;1.79589107599024e-10!GO:0012501;programmed cell death;1.98271742281751e-10!GO:0051169;nuclear transport;2.50847359470125e-10!GO:0006164;purine nucleotide biosynthetic process;2.69291325030639e-10!GO:0009260;ribonucleotide biosynthetic process;2.75216079268715e-10!GO:0006915;apoptosis;2.81322654132286e-10!GO:0005789;endoplasmic reticulum membrane;4.0129826284008e-10!GO:0009055;electron carrier activity;4.12173566520392e-10!GO:0016072;rRNA metabolic process;4.35018832231528e-10!GO:0042623;ATPase activity, coupled;4.53766748949221e-10!GO:0005643;nuclear pore;5.80261484906698e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.74309559589285e-10!GO:0048523;negative regulation of cellular process;7.24694661753992e-10!GO:0003712;transcription cofactor activity;1.04675927923236e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.11378651648849e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.270188330063e-09!GO:0004386;helicase activity;1.33646449480231e-09!GO:0006464;protein modification process;1.4522748713513e-09!GO:0009141;nucleoside triphosphate metabolic process;1.48752422417071e-09!GO:0006461;protein complex assembly;1.48935503159232e-09!GO:0065002;intracellular protein transport across a membrane;1.54881706610334e-09!GO:0008639;small protein conjugating enzyme activity;1.79891582100768e-09!GO:0019787;small conjugating protein ligase activity;2.12446558647104e-09!GO:0008219;cell death;2.53056846738329e-09!GO:0016265;death;2.53056846738329e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.57536649246902e-09!GO:0004842;ubiquitin-protein ligase activity;3.72258809205543e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.26172388332058e-09!GO:0016607;nuclear speck;4.55663457711033e-09!GO:0065004;protein-DNA complex assembly;5.23702537455143e-09!GO:0008565;protein transporter activity;5.57189006580446e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;5.73246844608372e-09!GO:0006888;ER to Golgi vesicle-mediated transport;6.29298245901897e-09!GO:0050657;nucleic acid transport;6.29298245901897e-09!GO:0051236;establishment of RNA localization;6.29298245901897e-09!GO:0050658;RNA transport;6.29298245901897e-09!GO:0006403;RNA localization;6.4163234956973e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.65612620280926e-09!GO:0009144;purine nucleoside triphosphate metabolic process;6.65612620280926e-09!GO:0006366;transcription from RNA polymerase II promoter;8.60019014141682e-09!GO:0005788;endoplasmic reticulum lumen;1.04378993919031e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.07361051384204e-08!GO:0050794;regulation of cellular process;1.22123623306546e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.41515139067242e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.41515139067242e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.41515139067242e-08!GO:0006323;DNA packaging;1.58247767846095e-08!GO:0030120;vesicle coat;1.6970701566316e-08!GO:0030662;coated vesicle membrane;1.6970701566316e-08!GO:0008026;ATP-dependent helicase activity;1.87298924641529e-08!GO:0009117;nucleotide metabolic process;1.87298924641529e-08!GO:0043038;amino acid activation;2.12031486852002e-08!GO:0006418;tRNA aminoacylation for protein translation;2.12031486852002e-08!GO:0043039;tRNA aminoacylation;2.12031486852002e-08!GO:0046930;pore complex;2.22040976405534e-08!GO:0009060;aerobic respiration;2.35091996294577e-08!GO:0016881;acid-amino acid ligase activity;2.360045251092e-08!GO:0043566;structure-specific DNA binding;3.21026668272925e-08!GO:0043687;post-translational protein modification;3.2621664412921e-08!GO:0048519;negative regulation of biological process;3.86285851957098e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.87975259731222e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.87975259731222e-08!GO:0009056;catabolic process;4.19870225770071e-08!GO:0015986;ATP synthesis coupled proton transport;4.33825314729909e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.33825314729909e-08!GO:0017038;protein import;4.83936947058335e-08!GO:0003697;single-stranded DNA binding;5.06002683726484e-08!GO:0030532;small nuclear ribonucleoprotein complex;5.62242034491995e-08!GO:0015630;microtubule cytoskeleton;6.87428558201486e-08!GO:0051246;regulation of protein metabolic process;6.93920066799527e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.29241906810833e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.29241906810833e-08!GO:0051188;cofactor biosynthetic process;7.93879054228366e-08!GO:0046034;ATP metabolic process;8.24754871867463e-08!GO:0045333;cellular respiration;8.32861321335922e-08!GO:0000785;chromatin;1.04878265802735e-07!GO:0006333;chromatin assembly or disassembly;1.29190529813759e-07!GO:0003924;GTPase activity;1.57082773558644e-07!GO:0042981;regulation of apoptosis;1.7201611428427e-07!GO:0016779;nucleotidyltransferase activity;1.74514280849922e-07!GO:0019829;cation-transporting ATPase activity;1.85325674446505e-07!GO:0007005;mitochondrion organization and biogenesis;2.21598706200161e-07!GO:0043067;regulation of programmed cell death;2.61924318918795e-07!GO:0051028;mRNA transport;2.95695638906419e-07!GO:0006099;tricarboxylic acid cycle;3.23077780730572e-07!GO:0046356;acetyl-CoA catabolic process;3.23077780730572e-07!GO:0048475;coated membrane;3.39768590492411e-07!GO:0030117;membrane coat;3.39768590492411e-07!GO:0051187;cofactor catabolic process;3.82057182838596e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.55814749074721e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.25675714306419e-07!GO:0044431;Golgi apparatus part;5.69379344307256e-07!GO:0000775;chromosome, pericentric region;6.5723939208572e-07!GO:0005768;endosome;6.65982108789476e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.70430678330963e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.89085030148056e-07!GO:0015078;hydrogen ion transmembrane transporter activity;7.42623343995192e-07!GO:0006334;nucleosome assembly;7.9998497337464e-07!GO:0006754;ATP biosynthetic process;8.92937768360476e-07!GO:0006753;nucleoside phosphate metabolic process;8.92937768360476e-07!GO:0009109;coenzyme catabolic process;9.64230398298867e-07!GO:0006084;acetyl-CoA metabolic process;9.64821046872659e-07!GO:0043069;negative regulation of programmed cell death;1.05226050717761e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.07161360365237e-06!GO:0005667;transcription factor complex;1.07376271096989e-06!GO:0043066;negative regulation of apoptosis;1.28051851105996e-06!GO:0005819;spindle;1.5038099676673e-06!GO:0005813;centrosome;1.5223680993742e-06!GO:0016491;oxidoreductase activity;1.60606207015825e-06!GO:0000245;spliceosome assembly;1.64550647707068e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.95186644426149e-06!GO:0031324;negative regulation of cellular metabolic process;1.98173936522581e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.19447561541255e-06!GO:0009108;coenzyme biosynthetic process;2.19447561541255e-06!GO:0032446;protein modification by small protein conjugation;2.58405973926322e-06!GO:0006916;anti-apoptosis;2.98177393945523e-06!GO:0016567;protein ubiquitination;3.14798763177074e-06!GO:0007051;spindle organization and biogenesis;3.3051186420249e-06!GO:0045259;proton-transporting ATP synthase complex;3.39348535293363e-06!GO:0031497;chromatin assembly;3.51944053798379e-06!GO:0006261;DNA-dependent DNA replication;3.55876972738895e-06!GO:0044440;endosomal part;3.84148026094718e-06!GO:0010008;endosome membrane;3.84148026094718e-06!GO:0006613;cotranslational protein targeting to membrane;4.0915383305048e-06!GO:0004298;threonine endopeptidase activity;4.09825526604338e-06!GO:0005815;microtubule organizing center;4.36345878449143e-06!GO:0000151;ubiquitin ligase complex;4.57347991887635e-06!GO:0016787;hydrolase activity;4.57347991887635e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.16221037717134e-06!GO:0005798;Golgi-associated vesicle;5.62549709768953e-06!GO:0016853;isomerase activity;6.14335777293107e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.99706037388491e-06!GO:0051170;nuclear import;7.73197858385756e-06!GO:0016859;cis-trans isomerase activity;8.35541729628962e-06!GO:0050789;regulation of biological process;9.80697412185876e-06!GO:0005762;mitochondrial large ribosomal subunit;1.02941744624494e-05!GO:0000315;organellar large ribosomal subunit;1.02941744624494e-05!GO:0031252;leading edge;1.12660674380465e-05!GO:0005770;late endosome;1.25867337517969e-05!GO:0051329;interphase of mitotic cell cycle;1.5425570562521e-05!GO:0009892;negative regulation of metabolic process;1.56768798519318e-05!GO:0006606;protein import into nucleus;1.63403708195327e-05!GO:0006752;group transfer coenzyme metabolic process;2.3669710339761e-05!GO:0000139;Golgi membrane;2.38398456667436e-05!GO:0003899;DNA-directed RNA polymerase activity;2.46251608766773e-05!GO:0003724;RNA helicase activity;2.54533264884147e-05!GO:0016740;transferase activity;2.7383235056329e-05!GO:0007010;cytoskeleton organization and biogenesis;3.12629223531444e-05!GO:0000075;cell cycle checkpoint;3.16762444905438e-05!GO:0030867;rough endoplasmic reticulum membrane;3.27144982859128e-05!GO:0016564;transcription repressor activity;3.35965913081276e-05!GO:0045454;cell redox homeostasis;3.45931597478861e-05!GO:0003714;transcription corepressor activity;3.48041890603086e-05!GO:0016563;transcription activator activity;3.48812171124687e-05!GO:0016023;cytoplasmic membrane-bound vesicle;4.25264512439729e-05!GO:0043623;cellular protein complex assembly;4.32048948982959e-05!GO:0031988;membrane-bound vesicle;4.55872484188853e-05!GO:0043021;ribonucleoprotein binding;4.75807472743854e-05!GO:0009165;nucleotide biosynthetic process;4.80058720409702e-05!GO:0045786;negative regulation of progression through cell cycle;5.08841504124869e-05!GO:0030036;actin cytoskeleton organization and biogenesis;5.1946021777389e-05!GO:0051325;interphase;5.1946021777389e-05!GO:0005525;GTP binding;5.73888368146255e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.14243955199312e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.22655974535685e-05!GO:0005657;replication fork;6.70163272802319e-05!GO:0003713;transcription coactivator activity;6.83816407038061e-05!GO:0031982;vesicle;7.04295218413455e-05!GO:0005048;signal sequence binding;7.46419970430874e-05!GO:0005773;vacuole;7.48345934816719e-05!GO:0031410;cytoplasmic vesicle;7.50396832962622e-05!GO:0000314;organellar small ribosomal subunit;7.80064413481291e-05!GO:0005763;mitochondrial small ribosomal subunit;7.80064413481291e-05!GO:0006793;phosphorus metabolic process;8.96833016743995e-05!GO:0006796;phosphate metabolic process;8.96833016743995e-05!GO:0008361;regulation of cell size;0.000109557641965352!GO:0005769;early endosome;0.000109557641965352!GO:0019867;outer membrane;0.000112471282409587!GO:0016568;chromatin modification;0.000113617245756983!GO:0051427;hormone receptor binding;0.000122074524592266!GO:0008654;phospholipid biosynthetic process;0.000123283395706937!GO:0048522;positive regulation of cellular process;0.000131680253167775!GO:0031968;organelle outer membrane;0.000132537010872687!GO:0016049;cell growth;0.000142917574726636!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000162291230042994!GO:0051789;response to protein stimulus;0.000167922323521383!GO:0006986;response to unfolded protein;0.000167922323521383!GO:0015980;energy derivation by oxidation of organic compounds;0.000171527789265126!GO:0006612;protein targeting to membrane;0.000173151546016259!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000196351101619392!GO:0001558;regulation of cell growth;0.000210571941833556!GO:0006091;generation of precursor metabolites and energy;0.00022917695101512!GO:0016363;nuclear matrix;0.00023162492502502!GO:0016310;phosphorylation;0.00023773099700708!GO:0003690;double-stranded DNA binding;0.000238973192529196!GO:0035257;nuclear hormone receptor binding;0.000256981417547137!GO:0030133;transport vesicle;0.000263392403192063!GO:0033116;ER-Golgi intermediate compartment membrane;0.000263737779150319!GO:0006950;response to stress;0.00027234231134549!GO:0051168;nuclear export;0.000286171530138186!GO:0000323;lytic vacuole;0.000286729275043727!GO:0005764;lysosome;0.000286729275043727!GO:0044452;nucleolar part;0.000299127081129206!GO:0016481;negative regulation of transcription;0.000307951138765404!GO:0030663;COPI coated vesicle membrane;0.000312844164767271!GO:0030126;COPI vesicle coat;0.000312844164767271!GO:0008094;DNA-dependent ATPase activity;0.00031628559348547!GO:0006626;protein targeting to mitochondrion;0.000329218830032287!GO:0030029;actin filament-based process;0.000330019952728364!GO:0005885;Arp2/3 protein complex;0.000336100302298361!GO:0019899;enzyme binding;0.000348076570945233!GO:0005741;mitochondrial outer membrane;0.000348592605088385!GO:0000776;kinetochore;0.000351196408424859!GO:0019222;regulation of metabolic process;0.000356474474791457!GO:0032561;guanyl ribonucleotide binding;0.000366394696522972!GO:0019001;guanyl nucleotide binding;0.000366394696522972!GO:0006302;double-strand break repair;0.00038323093733056!GO:0008250;oligosaccharyl transferase complex;0.000399125978130265!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000447497838016412!GO:0004576;oligosaccharyl transferase activity;0.000454190725789634!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000496346029522032!GO:0005905;coated pit;0.000533219275503342!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000537892718011099!GO:0008186;RNA-dependent ATPase activity;0.000592446606348384!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000700140605879229!GO:0051252;regulation of RNA metabolic process;0.000706516179923695!GO:0043681;protein import into mitochondrion;0.000725875349956527!GO:0003729;mRNA binding;0.000726756203367763!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000798512013700355!GO:0007088;regulation of mitosis;0.00083562500854446!GO:0031072;heat shock protein binding;0.000862649862248585!GO:0030137;COPI-coated vesicle;0.000885511271598711!GO:0018196;peptidyl-asparagine modification;0.000904450482548197!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000904450482548197!GO:0005791;rough endoplasmic reticulum;0.000918510897773319!GO:0051052;regulation of DNA metabolic process;0.000918510897773319!GO:0006839;mitochondrial transport;0.000928694040132676!GO:0006891;intra-Golgi vesicle-mediated transport;0.000975599965984201!GO:0006383;transcription from RNA polymerase III promoter;0.000984739010186619!GO:0000059;protein import into nucleus, docking;0.000987205379835258!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000990267460879736!GO:0048500;signal recognition particle;0.00108585430326306!GO:0007052;mitotic spindle organization and biogenesis;0.00109163126367441!GO:0051920;peroxiredoxin activity;0.00115693883642354!GO:0008033;tRNA processing;0.00117889338560303!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00118985597877572!GO:0046483;heterocycle metabolic process;0.00122256483764154!GO:0019843;rRNA binding;0.00124489600322072!GO:0007059;chromosome segregation;0.00137697765009599!GO:0006414;translational elongation;0.0013992987989595!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00151583895095009!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00151583895095009!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00151583895095009!GO:0004004;ATP-dependent RNA helicase activity;0.00156922449575394!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00177073237257393!GO:0000082;G1/S transition of mitotic cell cycle;0.00178050387070758!GO:0030658;transport vesicle membrane;0.00184505639961905!GO:0046474;glycerophospholipid biosynthetic process;0.00208128816743357!GO:0008312;7S RNA binding;0.00208232264128028!GO:0000786;nucleosome;0.0021091448653402!GO:0008047;enzyme activator activity;0.00213454004725606!GO:0042802;identical protein binding;0.0021616908596686!GO:0004527;exonuclease activity;0.002205723284961!GO:0007050;cell cycle arrest;0.0022241728830614!GO:0009112;nucleobase metabolic process;0.00229674638276244!GO:0008168;methyltransferase activity;0.00231381578727266!GO:0046489;phosphoinositide biosynthetic process;0.00232466940909821!GO:0016741;transferase activity, transferring one-carbon groups;0.00240608700697072!GO:0030134;ER to Golgi transport vesicle;0.00247357246307889!GO:0030880;RNA polymerase complex;0.00251888945032045!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0025603608992443!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00263546664792328!GO:0045047;protein targeting to ER;0.00263546664792328!GO:0065007;biological regulation;0.00265965613852941!GO:0048471;perinuclear region of cytoplasm;0.00269611502054854!GO:0007243;protein kinase cascade;0.00277095981403658!GO:0030127;COPII vesicle coat;0.00279323410879679!GO:0012507;ER to Golgi transport vesicle membrane;0.00279323410879679!GO:0007093;mitotic cell cycle checkpoint;0.00279433088439184!GO:0003678;DNA helicase activity;0.00284627799160609!GO:0051087;chaperone binding;0.00284718775289488!GO:0065009;regulation of a molecular function;0.00290613671566782!GO:0005684;U2-dependent spliceosome;0.00300373282045774!GO:0043488;regulation of mRNA stability;0.00304666667052678!GO:0043487;regulation of RNA stability;0.00304666667052678!GO:0006402;mRNA catabolic process;0.00308871679097!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00321555914304163!GO:0003684;damaged DNA binding;0.00323442333621973!GO:0008632;apoptotic program;0.00327068635878472!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00338294234285725!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00346469951023233!GO:0004177;aminopeptidase activity;0.00356160261591683!GO:0008180;signalosome;0.00358416467541329!GO:0030132;clathrin coat of coated pit;0.00381605561345671!GO:0007006;mitochondrial membrane organization and biogenesis;0.00383127868047636!GO:0008139;nuclear localization sequence binding;0.00393369777665303!GO:0006275;regulation of DNA replication;0.00398572313933231!GO:0006310;DNA recombination;0.00419125787503284!GO:0032984;macromolecular complex disassembly;0.00439382203972995!GO:0003682;chromatin binding;0.00461159772697612!GO:0001726;ruffle;0.00461766305850797!GO:0030660;Golgi-associated vesicle membrane;0.00471419964242197!GO:0043284;biopolymer biosynthetic process;0.00486748626558473!GO:0008092;cytoskeletal protein binding;0.00498862416875024!GO:0016251;general RNA polymerase II transcription factor activity;0.00531094208039432!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0054339125539728!GO:0000428;DNA-directed RNA polymerase complex;0.0054339125539728!GO:0006352;transcription initiation;0.0054339125539728!GO:0032508;DNA duplex unwinding;0.0054800782790979!GO:0032392;DNA geometric change;0.0054800782790979!GO:0030027;lamellipodium;0.00548082295836701!GO:0030521;androgen receptor signaling pathway;0.00550774519401353!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00559108766039183!GO:0035258;steroid hormone receptor binding;0.00568314335083398!GO:0017166;vinculin binding;0.00568314335083398!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00568314335083398!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00568314335083398!GO:0030176;integral to endoplasmic reticulum membrane;0.00576807727219409!GO:0045045;secretory pathway;0.00587442553470697!GO:0015631;tubulin binding;0.00620793661500716!GO:0006401;RNA catabolic process;0.00624831689632698!GO:0009116;nucleoside metabolic process;0.00648851043890845!GO:0006220;pyrimidine nucleotide metabolic process;0.00655485609342294!GO:0000339;RNA cap binding;0.00698589516105083!GO:0031124;mRNA 3'-end processing;0.00704043674766223!GO:0005096;GTPase activator activity;0.00709283871371312!GO:0006892;post-Golgi vesicle-mediated transport;0.00724283788678197!GO:0000049;tRNA binding;0.00725214374657836!GO:0031902;late endosome membrane;0.00751368269597626!GO:0005874;microtubule;0.0076372206874515!GO:0003711;transcription elongation regulator activity;0.00779461885894729!GO:0006595;polyamine metabolic process;0.00780466091874309!GO:0016197;endosome transport;0.00811535205183338!GO:0005876;spindle microtubule;0.00819522055849315!GO:0051540;metal cluster binding;0.00820692043350233!GO:0051536;iron-sulfur cluster binding;0.00820692043350233!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00840904521229102!GO:0015399;primary active transmembrane transporter activity;0.00840904521229102!GO:0043241;protein complex disassembly;0.00841800592321867!GO:0043624;cellular protein complex disassembly;0.00874081123890181!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00875937916970582!GO:0003746;translation elongation factor activity;0.00880348486742196!GO:0045941;positive regulation of transcription;0.00883731863004509!GO:0006268;DNA unwinding during replication;0.0091865715317723!GO:0006289;nucleotide-excision repair;0.00934697486573562!GO:0006144;purine base metabolic process;0.00944499121868955!GO:0048518;positive regulation of biological process;0.00944499121868955!GO:0006405;RNA export from nucleus;0.00951773554526916!GO:0048144;fibroblast proliferation;0.00982585711759583!GO:0048145;regulation of fibroblast proliferation;0.00982585711759583!GO:0042770;DNA damage response, signal transduction;0.00994471814007435!GO:0005869;dynactin complex;0.010171259664189!GO:0030118;clathrin coat;0.010171259664189!GO:0043022;ribosome binding;0.010171259664189!GO:0005862;muscle thin filament tropomyosin;0.0104901733527499!GO:0008154;actin polymerization and/or depolymerization;0.0105850112714149!GO:0048146;positive regulation of fibroblast proliferation;0.0106012472400849!GO:0016044;membrane organization and biogenesis;0.0108773796063921!GO:0015992;proton transport;0.0109150599218729!GO:0000910;cytokinesis;0.0111130380792809!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0111655641113703!GO:0005669;transcription factor TFIID complex;0.0114220750407611!GO:0005832;chaperonin-containing T-complex;0.0116271195714178!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0117475744978683!GO:0046467;membrane lipid biosynthetic process;0.0120739284548918!GO:0044262;cellular carbohydrate metabolic process;0.0121695553146148!GO:0040008;regulation of growth;0.0122255177048981!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0122276916875444!GO:0006979;response to oxidative stress;0.0123155585660062!GO:0051128;regulation of cellular component organization and biogenesis;0.0125159559128381!GO:0006818;hydrogen transport;0.0125283618106252!GO:0008243;plasminogen activator activity;0.0128360047720206!GO:0007021;tubulin folding;0.0129038014090186!GO:0045893;positive regulation of transcription, DNA-dependent;0.012925526323233!GO:0048487;beta-tubulin binding;0.0132416474804859!GO:0031625;ubiquitin protein ligase binding;0.013260666843829!GO:0008022;protein C-terminus binding;0.0135356437725488!GO:0050662;coenzyme binding;0.0135875735564473!GO:0004518;nuclease activity;0.0136483268218979!GO:0033673;negative regulation of kinase activity;0.013694143081903!GO:0006469;negative regulation of protein kinase activity;0.013694143081903!GO:0006740;NADPH regeneration;0.013694143081903!GO:0006098;pentose-phosphate shunt;0.013694143081903!GO:0005758;mitochondrial intermembrane space;0.0140746814499126!GO:0006509;membrane protein ectodomain proteolysis;0.014377383289831!GO:0033619;membrane protein proteolysis;0.014377383289831!GO:0000209;protein polyubiquitination;0.0144692739232834!GO:0016272;prefoldin complex;0.0149075070525843!GO:0045892;negative regulation of transcription, DNA-dependent;0.0152531449844244!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0154401893023133!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0154401893023133!GO:0022408;negative regulation of cell-cell adhesion;0.0156946320457444!GO:0051287;NAD binding;0.0157646236542104!GO:0006611;protein export from nucleus;0.0160387050658001!GO:0050681;androgen receptor binding;0.0161389428843165!GO:0000228;nuclear chromosome;0.016352923738271!GO:0009124;nucleoside monophosphate biosynthetic process;0.016352923738271!GO:0009123;nucleoside monophosphate metabolic process;0.016352923738271!GO:0031323;regulation of cellular metabolic process;0.016352923738271!GO:0006417;regulation of translation;0.0163838953011642!GO:0031901;early endosome membrane;0.0164983836262463!GO:0016408;C-acyltransferase activity;0.0165570348060245!GO:0000922;spindle pole;0.0165959602191772!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0166315711808039!GO:0030125;clathrin vesicle coat;0.0167768895620143!GO:0030665;clathrin coated vesicle membrane;0.0167768895620143!GO:0005637;nuclear inner membrane;0.0168719858072327!GO:0031970;organelle envelope lumen;0.0168719858072327!GO:0006497;protein amino acid lipidation;0.0169011468717588!GO:0051539;4 iron, 4 sulfur cluster binding;0.0171136988154673!GO:0009967;positive regulation of signal transduction;0.0172020311253397!GO:0051348;negative regulation of transferase activity;0.017947820597157!GO:0016584;nucleosome positioning;0.0180603945906177!GO:0043065;positive regulation of apoptosis;0.0180966836784259!GO:0022411;cellular component disassembly;0.0188520997439956!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0190266304471988!GO:0030659;cytoplasmic vesicle membrane;0.0192328466988331!GO:0005100;Rho GTPase activator activity;0.0194139479315888!GO:0022890;inorganic cation transmembrane transporter activity;0.0197416257400677!GO:0009303;rRNA transcription;0.0204095596134559!GO:0000178;exosome (RNase complex);0.0205173978528761!GO:0000096;sulfur amino acid metabolic process;0.0214485614802789!GO:0031543;peptidyl-proline dioxygenase activity;0.0216534136954822!GO:0048468;cell development;0.0218132052423937!GO:0006984;ER-nuclear signaling pathway;0.0218646792132869!GO:0043596;nuclear replication fork;0.0218646792132869!GO:0030041;actin filament polymerization;0.0218646792132869!GO:0019798;procollagen-proline dioxygenase activity;0.0219326292376564!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0221700033077082!GO:0015002;heme-copper terminal oxidase activity;0.0221700033077082!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0221700033077082!GO:0004129;cytochrome-c oxidase activity;0.0221700033077082!GO:0031529;ruffle organization and biogenesis;0.0222512220146825!GO:0006378;mRNA polyadenylation;0.0226145324913058!GO:0047485;protein N-terminus binding;0.0227018104658247!GO:0006778;porphyrin metabolic process;0.0227018104658247!GO:0033013;tetrapyrrole metabolic process;0.0227018104658247!GO:0005801;cis-Golgi network;0.0228375940434895!GO:0007017;microtubule-based process;0.0230697276017679!GO:0007264;small GTPase mediated signal transduction;0.023080723158016!GO:0031371;ubiquitin conjugating enzyme complex;0.0231612595711635!GO:0043068;positive regulation of programmed cell death;0.0240113509485991!GO:0019206;nucleoside kinase activity;0.0243841403016546!GO:0031123;RNA 3'-end processing;0.0243875776660563!GO:0006376;mRNA splice site selection;0.0245372747140912!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0245372747140912!GO:0015036;disulfide oxidoreductase activity;0.0246103695707388!GO:0016126;sterol biosynthetic process;0.0252239595628549!GO:0030518;steroid hormone receptor signaling pathway;0.0261306344260388!GO:0006520;amino acid metabolic process;0.0265824850773007!GO:0000792;heterochromatin;0.0268081598277207!GO:0019752;carboxylic acid metabolic process;0.0269587074280669!GO:0031570;DNA integrity checkpoint;0.0269870293903553!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.027303841258172!GO:0004003;ATP-dependent DNA helicase activity;0.0276325742416817!GO:0008234;cysteine-type peptidase activity;0.0277812974712712!GO:0006693;prostaglandin metabolic process;0.0280268683349805!GO:0006692;prostanoid metabolic process;0.0280268683349805!GO:0001953;negative regulation of cell-matrix adhesion;0.0280268683349805!GO:0006506;GPI anchor biosynthetic process;0.0285219381870603!GO:0008538;proteasome activator activity;0.0285353848993042!GO:0000152;nuclear ubiquitin ligase complex;0.0291200611423444!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0293751925983107!GO:0005774;vacuolar membrane;0.0306323591197971!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.030681186071239!GO:0032940;secretion by cell;0.0306933551239308!GO:0009161;ribonucleoside monophosphate metabolic process;0.0307297359583907!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0307297359583907!GO:0006082;organic acid metabolic process;0.0307557044026736!GO:0050790;regulation of catalytic activity;0.0311380085003347!GO:0006007;glucose catabolic process;0.031301901371153!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0314334320846269!GO:0003702;RNA polymerase II transcription factor activity;0.03157628060116!GO:0009451;RNA modification;0.0316472445046364!GO:0008629;induction of apoptosis by intracellular signals;0.031717288913052!GO:0030508;thiol-disulfide exchange intermediate activity;0.0318498413618895!GO:0006350;transcription;0.0319592256221939!GO:0042158;lipoprotein biosynthetic process;0.0321561962986081!GO:0007569;cell aging;0.0323988421758052!GO:0008637;apoptotic mitochondrial changes;0.0324392406938446!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0327057608606875!GO:0004674;protein serine/threonine kinase activity;0.0328161822850676!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0339487299558844!GO:0007040;lysosome organization and biogenesis;0.0339487299558844!GO:0043414;biopolymer methylation;0.0342891791772391!GO:0046112;nucleobase biosynthetic process;0.0344680380680886!GO:0003756;protein disulfide isomerase activity;0.0346515530583205!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0346515530583205!GO:0042168;heme metabolic process;0.0358566444197241!GO:0006650;glycerophospholipid metabolic process;0.0358595849544311!GO:0007033;vacuole organization and biogenesis;0.0360596113965386!GO:0045792;negative regulation of cell size;0.0360790989414905!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0361681968104843!GO:0035035;histone acetyltransferase binding;0.0368462266904299!GO:0045936;negative regulation of phosphate metabolic process;0.0369790078445647!GO:0008610;lipid biosynthetic process;0.0371363549315047!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0379778056499953!GO:0019783;small conjugating protein-specific protease activity;0.0380482882227514!GO:0001952;regulation of cell-matrix adhesion;0.0380639705754702!GO:0004532;exoribonuclease activity;0.0380639705754702!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0380639705754702!GO:0005680;anaphase-promoting complex;0.0384778413666785!GO:0006505;GPI anchor metabolic process;0.0386305744624977!GO:0004287;prolyl oligopeptidase activity;0.0388032686418369!GO:0030433;ER-associated protein catabolic process;0.0388439005926033!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0388439005926033!GO:0044433;cytoplasmic vesicle part;0.0399959045856474!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0402399119203334!GO:0032259;methylation;0.0403263808175658!GO:0006607;NLS-bearing substrate import into nucleus;0.0404424387867284!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0408863884596551!GO:0033043;regulation of organelle organization and biogenesis;0.0408863884596551!GO:0005784;translocon complex;0.041275618310422!GO:0008097;5S rRNA binding;0.0413824893462903!GO:0004843;ubiquitin-specific protease activity;0.0414756212629371!GO:0030911;TPR domain binding;0.0416865320874006!GO:0030308;negative regulation of cell growth;0.0429164740792541!GO:0043492;ATPase activity, coupled to movement of substances;0.0434111683999519!GO:0003923;GPI-anchor transamidase activity;0.0435080651409902!GO:0016255;attachment of GPI anchor to protein;0.0435080651409902!GO:0042765;GPI-anchor transamidase complex;0.0435080651409902!GO:0001527;microfibril;0.0445749871783231!GO:0008408;3'-5' exonuclease activity;0.0446862911108658!GO:0006360;transcription from RNA polymerase I promoter;0.044695534332778!GO:0022415;viral reproductive process;0.0447374010844889!GO:0007004;telomere maintenance via telomerase;0.0451246756414246!GO:0030119;AP-type membrane coat adaptor complex;0.0455300468047999!GO:0031418;L-ascorbic acid binding;0.04558303064077!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0459715000502173!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0459715000502173!GO:0043433;negative regulation of transcription factor activity;0.0461030967468868!GO:0032200;telomere organization and biogenesis;0.0472573413204483!GO:0000723;telomere maintenance;0.0472573413204483!GO:0031326;regulation of cellular biosynthetic process;0.0473251197031722!GO:0030384;phosphoinositide metabolic process;0.0475688867293152!GO:0000077;DNA damage checkpoint;0.0476864902242354!GO:0009225;nucleotide-sugar metabolic process;0.0476864902242354!GO:0006354;RNA elongation;0.0476864902242354!GO:0000726;non-recombinational repair;0.0476864902242354!GO:0042026;protein refolding;0.0478018218400075!GO:0009262;deoxyribonucleotide metabolic process;0.0479339511818818!GO:0008283;cell proliferation;0.047996225252099!GO:0000781;chromosome, telomeric region;0.0480771631785113!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0488989752494306!GO:0043130;ubiquitin binding;0.0489341214802936!GO:0032182;small conjugating protein binding;0.0489341214802936!GO:0017134;fibroblast growth factor binding;0.0489341214802936!GO:0043601;nuclear replisome;0.0489341214802936!GO:0030894;replisome;0.0489341214802936!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.049079083725388!GO:0051101;regulation of DNA binding;0.0494581988203125!GO:0006733;oxidoreduction coenzyme metabolic process;0.0496320326965982
|sample_id=11280
|sample_id=11280
|sample_note=
|sample_note=
Line 76: Line 105:
|sample_tissue=heart
|sample_tissue=heart
|top_motifs=EN1,2:1.56336029654;GZF1:1.47497295092;MYBL2:1.3265417624;HSF1,2:1.27096297508;ZNF238:1.22364802077;ZNF384:1.21215901077;KLF4:1.07806955712;HES1:1.0643839091;HOX{A5,B5}:1.05304123128;GATA4:1.00230585045;TFDP1:0.981584907665;ALX4:0.936167044406;NKX3-1:0.933362408701;HOX{A4,D4}:0.905855798412;GFI1B:0.847331941621;NFATC1..3:0.815357596864;IKZF1:0.791130122813;HBP1_HMGB_SSRP1_UBTF:0.786596759485;TLX1..3_NFIC{dimer}:0.779557539605;PAX8:0.76737474491;PRDM1:0.759948846956;TAL1_TCF{3,4,12}:0.730761738457;NR3C1:0.723980084936;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.704677146485;SPZ1:0.704291816149;GFI1:0.696035788596;HOX{A6,A7,B6,B7}:0.695433358825;SRF:0.690471801705;E2F1..5:0.664084894638;LHX3,4:0.647284079157;TEAD1:0.644641006468;FOX{I1,J2}:0.619801878929;HAND1,2:0.591206601055;NKX2-2,8:0.582869696469;MZF1:0.582506321746;PAX1,9:0.569477889999;TFCP2:0.554913094127;ZIC1..3:0.548864905216;MYB:0.529645869291;NR1H4:0.522715928218;TEF:0.502706042747;UFEwm:0.492540940445;PRRX1,2:0.461371184944;NKX3-2:0.461037921259;CDC5L:0.450761366896;NFE2L2:0.441342226591;ESR1:0.432755060601;YY1:0.432330587159;EVI1:0.415996047666;GTF2I:0.412502961355;NFIX:0.400557786696;NFE2L1:0.380811981291;BACH2:0.380404183573;RXR{A,B,G}:0.368004981332;SOX17:0.366575265662;ELK1,4_GABP{A,B1}:0.360376396615;FOXL1:0.35291737355;FOS_FOS{B,L1}_JUN{B,D}:0.330761179528;GCM1,2:0.315623761891;ZNF143:0.304068375588;TBX4,5:0.253680826072;DMAP1_NCOR{1,2}_SMARC:0.250193262234;IRF1,2:0.247212340482;ADNP_IRX_SIX_ZHX:0.239684259952;NRF1:0.226592752161;EGR1..3:0.222741320369;TBP:0.215977179782;NKX6-1,2:0.206291511125;ATF6:0.192722035717;POU3F1..4:0.184331523619;PDX1:0.180628361709;GLI1..3:0.179320827525;MAFB:0.176079115455;AHR_ARNT_ARNT2:0.164361353708;MYFfamily:0.158835347674;FOXO1,3,4:0.152934507664;NANOG{mouse}:0.142788739937;PBX1:0.138503235441;TP53:0.137735105153;PATZ1:0.133685265812;STAT2,4,6:0.128924786356;STAT1,3:0.122466140991;GTF2A1,2:0.111168767473;ZBTB6:0.107739571762;TOPORS:0.0844019164729;POU5F1:0.0831519615408;MTE{core}:0.0817533877049;FOXD3:0.0790294561693;PAX4:0.0745164064846;EBF1:0.0590862525134;NHLH1,2:0.0562144312678;TFAP2{A,C}:0.0554172444295;SMAD1..7,9:0.0531119439848;HIC1:0.0518135210293;ZNF148:0.0441882088772;LEF1_TCF7_TCF7L1,2:0.0267211648941;JUN:0.0232411916943;HNF1A:0.01872340662;FOSL2:0.015901835771;RREB1:-0.00589585785489;TFAP2B:-0.018741747085;bHLH_family:-0.0189384477946;HLF:-0.023937205267;NKX2-3_NKX2-5:-0.0322384230616;XBP1:-0.0338599216513;TFAP4:-0.0350956017101;ELF1,2,4:-0.0421213913608;IRF7:-0.055285225863;DBP:-0.0557250527776;ZNF423:-0.061978358287;HMGA1,2:-0.0765954577417;NR5A1,2:-0.0883876538856;ZFP161:-0.0889508925561;RUNX1..3:-0.0901823343052;FOXQ1:-0.0902845189401;NFY{A,B,C}:-0.109325581425;PAX5:-0.110163397038;PAX3,7:-0.111766228853;POU6F1:-0.126068279878;RFX1:-0.126136591461;XCPE1{core}:-0.143259742683;ALX1:-0.156288488878;NANOG:-0.164344186664;AIRE:-0.164344708391;SOX{8,9,10}:-0.166131559297;NFE2:-0.17536104732;MAZ:-0.177355716652;AR:-0.18587750795;MTF1:-0.21472089204;HIF1A:-0.228109172663;POU1F1:-0.243855570984;NKX2-1,4:-0.24544342964;MEF2{A,B,C,D}:-0.248955733191;REST:-0.25137437626;CRX:-0.260385221158;HNF4A_NR2F1,2:-0.27494006114;ONECUT1,2:-0.297848566771;NFKB1_REL_RELA:-0.327235500594;SPI1:-0.327967877661;RFX2..5_RFXANK_RFXAP:-0.330016661318;TGIF1:-0.338561817298;CEBPA,B_DDIT3:-0.353119420726;TLX2:-0.372046483251;SOX5:-0.372562291257;NFIL3:-0.385100937223;FOXN1:-0.388065172277;PAX2:-0.398731598782;SPIB:-0.405502815296;ETS1,2:-0.409728221694;NR6A1:-0.412017499285;T:-0.42602887761;EP300:-0.436761041716;CREB1:-0.440398031833;MED-1{core}:-0.446211867677;SP1:-0.454703228604;ARID5B:-0.460365212714;FOXM1:-0.465782664253;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.471910078877;OCT4_SOX2{dimer}:-0.4790859644;ATF5_CREB3:-0.486847672514;POU2F1..3:-0.488717220114;BREu{core}:-0.505674835349;RXRA_VDR{dimer}:-0.506990111579;FOXP1:-0.512189153565;SOX2:-0.515370209049;VSX1,2:-0.525665332421;HOXA9_MEIS1:-0.528053591025;LMO2:-0.529568702698;BPTF:-0.533646636177;STAT5{A,B}:-0.553865173253;ESRRA:-0.557522028881;CUX2:-0.581043681257;GATA6:-0.583001513032;FOXP3:-0.61862297382;ATF2:-0.622725395829;SREBF1,2:-0.63487650238;FOXA2:-0.706325952067;HMX1:-0.707375117856;IKZF2:-0.715724623608;ZBTB16:-0.739649560627;FOX{D1,D2}:-0.751155470028;PITX1..3:-0.751250110094;PPARG:-0.762440684179;SNAI1..3:-0.833571165384;ZEB1:-0.927677883143;ATF4:-0.935403804548;CDX1,2,4:-0.977189388466;RBPJ:-1.0871298835;MYOD1:-1.09882668037;PAX6:-1.10948605579;RORA:-1.23301974775;FOX{F1,F2,J1}:-1.36726326106
|top_motifs=EN1,2:1.56336029654;GZF1:1.47497295092;MYBL2:1.3265417624;HSF1,2:1.27096297508;ZNF238:1.22364802077;ZNF384:1.21215901077;KLF4:1.07806955712;HES1:1.0643839091;HOX{A5,B5}:1.05304123128;GATA4:1.00230585045;TFDP1:0.981584907665;ALX4:0.936167044406;NKX3-1:0.933362408701;HOX{A4,D4}:0.905855798412;GFI1B:0.847331941621;NFATC1..3:0.815357596864;IKZF1:0.791130122813;HBP1_HMGB_SSRP1_UBTF:0.786596759485;TLX1..3_NFIC{dimer}:0.779557539605;PAX8:0.76737474491;PRDM1:0.759948846956;TAL1_TCF{3,4,12}:0.730761738457;NR3C1:0.723980084936;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.704677146485;SPZ1:0.704291816149;GFI1:0.696035788596;HOX{A6,A7,B6,B7}:0.695433358825;SRF:0.690471801705;E2F1..5:0.664084894638;LHX3,4:0.647284079157;TEAD1:0.644641006468;FOX{I1,J2}:0.619801878929;HAND1,2:0.591206601055;NKX2-2,8:0.582869696469;MZF1:0.582506321746;PAX1,9:0.569477889999;TFCP2:0.554913094127;ZIC1..3:0.548864905216;MYB:0.529645869291;NR1H4:0.522715928218;TEF:0.502706042747;UFEwm:0.492540940445;PRRX1,2:0.461371184944;NKX3-2:0.461037921259;CDC5L:0.450761366896;NFE2L2:0.441342226591;ESR1:0.432755060601;YY1:0.432330587159;EVI1:0.415996047666;GTF2I:0.412502961355;NFIX:0.400557786696;NFE2L1:0.380811981291;BACH2:0.380404183573;RXR{A,B,G}:0.368004981332;SOX17:0.366575265662;ELK1,4_GABP{A,B1}:0.360376396615;FOXL1:0.35291737355;FOS_FOS{B,L1}_JUN{B,D}:0.330761179528;GCM1,2:0.315623761891;ZNF143:0.304068375588;TBX4,5:0.253680826072;DMAP1_NCOR{1,2}_SMARC:0.250193262234;IRF1,2:0.247212340482;ADNP_IRX_SIX_ZHX:0.239684259952;NRF1:0.226592752161;EGR1..3:0.222741320369;TBP:0.215977179782;NKX6-1,2:0.206291511125;ATF6:0.192722035717;POU3F1..4:0.184331523619;PDX1:0.180628361709;GLI1..3:0.179320827525;MAFB:0.176079115455;AHR_ARNT_ARNT2:0.164361353708;MYFfamily:0.158835347674;FOXO1,3,4:0.152934507664;NANOG{mouse}:0.142788739937;PBX1:0.138503235441;TP53:0.137735105153;PATZ1:0.133685265812;STAT2,4,6:0.128924786356;STAT1,3:0.122466140991;GTF2A1,2:0.111168767473;ZBTB6:0.107739571762;TOPORS:0.0844019164729;POU5F1:0.0831519615408;MTE{core}:0.0817533877049;FOXD3:0.0790294561693;PAX4:0.0745164064846;EBF1:0.0590862525134;NHLH1,2:0.0562144312678;TFAP2{A,C}:0.0554172444295;SMAD1..7,9:0.0531119439848;HIC1:0.0518135210293;ZNF148:0.0441882088772;LEF1_TCF7_TCF7L1,2:0.0267211648941;JUN:0.0232411916943;HNF1A:0.01872340662;FOSL2:0.015901835771;RREB1:-0.00589585785489;TFAP2B:-0.018741747085;bHLH_family:-0.0189384477946;HLF:-0.023937205267;NKX2-3_NKX2-5:-0.0322384230616;XBP1:-0.0338599216513;TFAP4:-0.0350956017101;ELF1,2,4:-0.0421213913608;IRF7:-0.055285225863;DBP:-0.0557250527776;ZNF423:-0.061978358287;HMGA1,2:-0.0765954577417;NR5A1,2:-0.0883876538856;ZFP161:-0.0889508925561;RUNX1..3:-0.0901823343052;FOXQ1:-0.0902845189401;NFY{A,B,C}:-0.109325581425;PAX5:-0.110163397038;PAX3,7:-0.111766228853;POU6F1:-0.126068279878;RFX1:-0.126136591461;XCPE1{core}:-0.143259742683;ALX1:-0.156288488878;NANOG:-0.164344186664;AIRE:-0.164344708391;SOX{8,9,10}:-0.166131559297;NFE2:-0.17536104732;MAZ:-0.177355716652;AR:-0.18587750795;MTF1:-0.21472089204;HIF1A:-0.228109172663;POU1F1:-0.243855570984;NKX2-1,4:-0.24544342964;MEF2{A,B,C,D}:-0.248955733191;REST:-0.25137437626;CRX:-0.260385221158;HNF4A_NR2F1,2:-0.27494006114;ONECUT1,2:-0.297848566771;NFKB1_REL_RELA:-0.327235500594;SPI1:-0.327967877661;RFX2..5_RFXANK_RFXAP:-0.330016661318;TGIF1:-0.338561817298;CEBPA,B_DDIT3:-0.353119420726;TLX2:-0.372046483251;SOX5:-0.372562291257;NFIL3:-0.385100937223;FOXN1:-0.388065172277;PAX2:-0.398731598782;SPIB:-0.405502815296;ETS1,2:-0.409728221694;NR6A1:-0.412017499285;T:-0.42602887761;EP300:-0.436761041716;CREB1:-0.440398031833;MED-1{core}:-0.446211867677;SP1:-0.454703228604;ARID5B:-0.460365212714;FOXM1:-0.465782664253;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.471910078877;OCT4_SOX2{dimer}:-0.4790859644;ATF5_CREB3:-0.486847672514;POU2F1..3:-0.488717220114;BREu{core}:-0.505674835349;RXRA_VDR{dimer}:-0.506990111579;FOXP1:-0.512189153565;SOX2:-0.515370209049;VSX1,2:-0.525665332421;HOXA9_MEIS1:-0.528053591025;LMO2:-0.529568702698;BPTF:-0.533646636177;STAT5{A,B}:-0.553865173253;ESRRA:-0.557522028881;CUX2:-0.581043681257;GATA6:-0.583001513032;FOXP3:-0.61862297382;ATF2:-0.622725395829;SREBF1,2:-0.63487650238;FOXA2:-0.706325952067;HMX1:-0.707375117856;IKZF2:-0.715724623608;ZBTB16:-0.739649560627;FOX{D1,D2}:-0.751155470028;PITX1..3:-0.751250110094;PPARG:-0.762440684179;SNAI1..3:-0.833571165384;ZEB1:-0.927677883143;ATF4:-0.935403804548;CDX1,2,4:-0.977189388466;RBPJ:-1.0871298835;MYOD1:-1.09882668037;PAX6:-1.10948605579;RORA:-1.23301974775;FOX{F1,F2,J1}:-1.36726326106
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11280-116I2;search_select_hide=table117:FF:11280-116I2
}}
}}

Latest revision as of 16:30, 3 June 2020

Name:Preadipocyte - visceral, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11082
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stage56 years old adult
sexfemale
age56
cell typepreadipocyte
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2161
catalog numberCA802s-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005228
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11082 CAGE DRX008416 DRR009288
Accession ID Hg19

Library idBAMCTSS
CNhs11082 DRZ000713 DRZ002098
Accession ID Hg38

Library idBAMCTSS
CNhs11082 DRZ012063 DRZ013448
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005228
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10008.CCGTCC sRNA-Seq DRX037121 DRR041487
Accession ID Hg19

Library idBAMCTSS
SRhi10008.CCGTCC DRZ007129


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0368
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.386
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.109
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.123
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0957
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.364
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.22
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.309
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.0343
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.182
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0343
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.066
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0343
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0436
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.00228
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.317
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.149
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.149
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.149
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature-5.792532e-5
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.174
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.298
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.197
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.24
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.448
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11082

Jaspar motifP-value
MA0002.20.128
MA0003.10.907
MA0004.10.755
MA0006.10.662
MA0007.10.868
MA0009.10.287
MA0014.10.533
MA0017.10.0787
MA0018.24.43136e-6
MA0019.10.608
MA0024.10.00201
MA0025.10.0154
MA0027.10.86
MA0028.10.215
MA0029.10.398
MA0030.10.0455
MA0031.10.0233
MA0035.20.00492
MA0038.10.762
MA0039.20.0671
MA0040.10.947
MA0041.10.966
MA0042.10.771
MA0043.11.02318e-4
MA0046.10.818
MA0047.20.49
MA0048.10.0146
MA0050.10.257
MA0051.10.346
MA0052.10.248
MA0055.10.813
MA0057.10.514
MA0058.10.876
MA0059.10.323
MA0060.10.0395
MA0061.10.162
MA0062.20.0603
MA0065.20.0421
MA0066.10.821
MA0067.10.0208
MA0068.10.871
MA0069.10.172
MA0070.10.447
MA0071.10.712
MA0072.10.244
MA0073.10.981
MA0074.10.704
MA0076.10.367
MA0077.10.302
MA0078.10.333
MA0079.20.719
MA0080.24.81141e-7
MA0081.10.16
MA0083.10.0156
MA0084.10.169
MA0087.10.942
MA0088.10.14
MA0090.10.00109
MA0091.10.145
MA0092.10.258
MA0093.10.971
MA0099.27.91443e-5
MA0100.10.0582
MA0101.10.0424
MA0102.20.163
MA0103.11.01663e-6
MA0104.20.836
MA0105.10.997
MA0106.10.279
MA0107.10.0275
MA0108.20.0434
MA0111.10.616
MA0112.20.817
MA0113.10.797
MA0114.10.0459
MA0115.10.395
MA0116.10.409
MA0117.10.349
MA0119.10.239
MA0122.10.199
MA0124.10.49
MA0125.10.885
MA0131.10.915
MA0135.10.349
MA0136.15.8631e-4
MA0137.20.104
MA0138.20.323
MA0139.10.438
MA0140.10.066
MA0141.10.389
MA0142.10.36
MA0143.10.794
MA0144.10.391
MA0145.10.579
MA0146.10.202
MA0147.10.687
MA0148.10.474
MA0149.10.95
MA0150.10.716
MA0152.13.80978e-4
MA0153.10.352
MA0154.10.204
MA0155.10.284
MA0156.10.0087
MA0157.10.0759
MA0159.10.235
MA0160.10.0588
MA0162.10.583
MA0163.10.0818
MA0164.10.83
MA0258.10.0247
MA0259.10.651



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11082

Novel motifP-value
10.747
100.358
1000.343
1010.956
1020.246
1030.722
1040.776
1050.292
1060.13
1070.397
1080.693
1090.883
110.691
1100.17
1110.628
1120.719
1133.85733e-4
1140.56
1150.618
1160.475
1170.771
1180.0449
1190.32
120.392
1200.736
1210.489
1220.00852
1230.00111
1240.788
1250.662
1260.17
1270.853
1280.697
1290.556
130.689
1300.0528
1310.922
1320.607
1330.216
1340.244
1350.968
1360.434
1370.768
1380.175
1390.0186
140.0565
1400.132
1410.569
1420.868
1430.932
1440.949
1450.803
1460.752
1470.071
1480.493
1490.916
150.259
1500.366
1510.178
1520.421
1530.776
1540.885
1550.00794
1560.382
1570.298
1586.26389e-4
1590.136
160.418
1600.653
1610.108
1620.445
1630.925
1640.951
1650.468
1660.811
1670.136
1680.569
1690.278
170.844
180.86
190.0729
20.313
200.225
210.0248
220.839
230.833
240.559
250.416
260.919
270.613
280.159
290.559
30.621
300.121
310.541
320.0606
330.638
340.992
350.0984
360.0576
370.744
380.401
390.101
40.155
400.00131
410.094
420.692
430.386
440.875
450.274
460.876
470.756
480.856
490.0732
50.541
500.438
510.863
520.616
530.181
540.693
550.223
560.887
570.445
580.283
590.819
60.572
600.303
610.931
620.598
630.894
640.417
650.532
660.445
670.921
680.961
690.402
70.237
700.11
710.545
720.756
730.708
740.108
750.479
760.153
770.325
780.132
790.505
80.722
800.971
810.683
820.158
830.753
840.704
850.132
860.659
870.372
880.844
890.725
90.145
900.308
910.813
920.83
930.3
940.932
950.135
960.858
970.648
980.0936
990.0016



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11082


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002582 (visceral preadipocyte)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000143 (human visceral preadipocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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