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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=CAGE@SAMD00004698
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000451,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000784,CL:0000988,CL:0002320,CL:0002371
|accession_numbers=CAGE;DRX008073;DRR008945;DRZ000370;DRZ001755;DRZ011720;DRZ013105
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000255,CL:0000451,CL:0000784
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000045
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!3.27!1868.14!IRF8;;chr6:391743..391759,+!p1@IRF4!3.22!1641.05!IRF4;;chr19:50922187..50922204,+!p1@SPIB!2.51!319.17!SPIB;;chr2:68592406..68592424,+!p1@PLEK!2.43!269.41!PLEK;;chr8:135614120..135614149,-!p5@ZFAT!2.04!108.11!ZFAT;;chr8:135613849..135613883,-!p7@ZFAT!1.98!94.95!ZFAT;;chr11:615942..615957,-!p1@IRF7!1.92!729.29!IRF7;;chr2:68592394..68592405,+!p2@PLEK!1.92!82.37!PLEK;;chr18:53257001..53257015,-!p5@TCF4!1.91!133.27!TCF4;;chr7:50344251..50344288,+!p3@IKZF1!1.91!80.65!IKZF1;;chr8:135614084..135614119,-!p4@ZFAT!1.90!77.79!ZFAT;;chr2:100759037..100759058,-!p2@AFF3!1.89!77.22!AFF3;;chr2:100759010..100759035,-!p1@AFF3!1.89!76.65!AFF3;;chr16:85936412..85936431,+!p2@IRF8!1.86!71.50!IRF8;;chr7:50343634..50343717,+!p2@IKZF1!1.82!64.64!IKZF1;;chr7:50344289..50344323,+!p1@IKZF1!1.76!56.63!IKZF1;;chr11:47400078..47400106,-!p1@SPI1!1.73!52.62!SPI1;;chr6:45390300..45390335,+!p4@RUNX2!1.69!73.79!RUNX2;;chr1:244214577..244214593,+!p1@ZNF238!1.66!44.62!ZNF238;;chr19:54041669..54041697,+!p2@ZNF331!1.64!42.90!ZNF331;;chr19:12721790..12721810,+!p2@ZNF791!1.62!107.54!ZNF791;;chr6:45390599..45390662,+!p11@RUNX2!1.62!49.19!RUNX2;;chr18:53255839..53255854,-!p13@TCF4!1.59!44.62!TCF4;;chr19:36391434..36391450,-!p1@NFKBID!1.58!70.36!NFKBID;;chr2:60780607..60780624,-!p2@BCL11A!1.56!104.10!BCL11A;;chr6:45390269..45390298,+!p5@RUNX2!1.54!54.34!RUNX2;;chr5:142782823..142782854,-!p3@NR3C1!1.52!45.76!NR3C1;;chr18:53253297..53253322,-!p30@TCF4!1.52!32.03!TCF4;;chr5:142814241..142814278,-!p12@NR3C1!1.51!31.46!NR3C1;;chr3:57260377..57260399,-!p2@HESX1!1.49!29.74!HESX1;;chr9:102584262..102584276,+!p1@NR4A3!1.47!62.35!NR4A3;;chr6:135502408..135502459,+!p2@MYB!1.45!31.46!MYB;;chr8:135613895..135613921,-!p8@ZFAT!1.45!27.46!ZFAT;;chr6:135502501..135502546,+!p1@MYB!1.44!31.46!MYB;;chr19:54058073..54058088,+!p1@ZNF331!1.44!26.31!ZNF331;;chr18:52989565..52989623,-!p9@TCF4!1.43!32.60!TCF4;;chr12:111537227..111537239,+!p7@CUX2!1.43!25.74!CUX2;;chr10:104154415..104154434,+!p5@NFKB2!1.38!22.88!NFKB2;;chr2:60781201..60781258,-!p3@BCL11A!1.38!22.88!BCL11A;;chr5:88178983..88179012,-!p1@MEF2C!1.36!162.45!MEF2C;;chrY:21906594..21906622,-!p1@KDM5D!1.36!21.74!KDM5D;;chr1:244214655..244214666,+!p7@ZNF238!1.35!21.16!ZNF238;;chr2:145277640..145277771,-!p1@ZEB2!1.33!261.97!ZEB2;;chr15:31619140..31619152,+!p11@KLF13!1.32!20.02!KLF13;;chr1:40367668..40367684,-!p2@MYCL1!1.30!18.88!MYCL1;;chr18:53255415..53255491,-!p1@TCF4!1.28!149.86!TCF4;;chr7:104654690..104654704,+!p2@MLL5!1.28!35.46!MLL5;;chr6:44233252..44233296,-!p1@NFKBIE!1.27!171.03!NFKBIE;;chr6:12009042..12009092,+!p6@HIVEP1!1.27!22.88!HIVEP1;;chr1:92949331..92949377,-!p2@GFI1!1.27!17.73!GFI1;;chrX:129244430..129244442,-!p5@ELF4!1.27!17.73!ELF4;;chr10:35484053..35484076,+!p1@CREM!1.26!42.90!CREM;;chr16:85936539..85936562,+!p3@IRF8!1.26!17.16!IRF8;;chr8:135614159..135614170,-!p13@ZFAT!1.25!16.59!ZFAT;;chr2:61108695..61108753,+!p1@REL!1.23!107.54!REL;;chr2:100758991..100759009,-!p3@AFF3!1.23!16.02!AFF3;;chr1:244214611..244214624,+!p4@ZNF238!1.23!16.02!ZNF238;;chr14:35873947..35873965,-!p1@NFKBIA!1.22!954.09!NFKBIA;;chr1:156470515..156470542,-!p2@MEF2D!1.22!79.51!MEF2D;;chr2:157189180..157189290,-!p1@NR4A2!1.21!78.94!NR4A2;;chr9:117150254..117150271,-!p1@AKNA!1.21!41.18!AKNA;;chr1:25256756..25256774,-!p1@RUNX3!1.21!28.60!RUNX3;;chr19:50432132..50432217,+!p2@ATF5!1.21!18.30!ATF5;;chr10:104155480..104155534,+!p2@NFKB2!1.20!94.38!NFKB2;;chr1:40367530..40367597,-!p1@MYCL1!1.20!26.88!MYCL1;;chr2:192015701..192015743,-!p1@STAT4!1.19!20.02!STAT4;;chrX:106960180..106960197,-!p2@TSC22D3!1.18!53.20!TSC22D3;;chr7:104654718..104654741,+!p3@MLL5!1.18!20.59!MLL5;;chr1:92950138..92950159,-!p4@GFI1!1.18!14.30!GFI1;;chr1:168195229..168195294,+!p1@SFT2D2,p1@TBX19!1.17!608.60!TBX19;;chr9:102584241..102584261,+!p4@NR4A3!1.17!21.16!NR4A3;;chr6:144385698..144385742,-!p2@PLAGL1!1.17!16.59!PLAGL1;;chr18:53257027..53257052,-!p3@TCF4!1.16!53.20!TCF4;;chr14:74226961..74227020,-!p1@C14orf43!1.15!86.94!C14orf43;;chr3:39195075..39195088,-!p1@CSRNP1!1.15!82.37!CSRNP1;;chr6:106534192..106534224,+!p1@PRDM1!1.15!37.18!PRDM1;;chr11:615570..615721,-!p2@IRF7!1.15!25.74!IRF7;;chr15:31619200..31619211,+!p12@KLF13!1.15!14.30!KLF13;;chr13:72441315..72441454,-!p1@DACH1!1.14!25.74!DACH1;;chr4:106068026..106068084,+!p1@TET2!1.13!111.54!TET2;;chr18:52989031..52989079,-!p2@TCF4!1.13!29.17!TCF4;;chr8:103668114..103668134,-!p5@KLF10!1.13!12.58!KLF10;;chr9:102584278..102584285,+!p5@NR4A3!1.13!12.58!NR4A3;;chr15:74833584..74833626,+!p1@ARID3B!1.12!28.60!ARID3B;;chr7:127032330..127032356,-!p3@ZNF800!1.12!15.44!ZNF800;;chr2:97202480..97202499,+!p1@ARID5A!1.11!118.97!ARID5A;;chr18:52989001..52989030,-!p10@TCF4!1.11!13.16!TCF4;;chr14:64761083..64761101,-!p1@ESR2!1.11!12.01!ESR2;;chr14:64971288..64971316,-!p2@ZBTB25!1.09!34.89!ZBTB25;;chr16:85936600..85936623,+!p4@IRF8!1.09!11.44!IRF8;;chr5:142782862..142782881,-!p11@NR3C1!1.09!11.44!NR3C1;;chr4:140005443..140005527,-!p2@ELF2!1.08!65.21!ELF2;;chr10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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000451;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000784;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor2.CNhs12196.11309-117C4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor2.CNhs12196.11309-117C4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor2.CNhs12196.11309-117C4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor2.CNhs12196.11309-117C4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor2.CNhs12196.11309-117C4.hg38.nobarcode.ctss.bed.gz
|id=FF:11309-117C4
|id=FF:11309-117C4
|is_a=EFO:0002091;;FF:0000002;;FF:0000045;;FF:0000210
|is_a=EFO:0002091;;FF:0000045
|is_obsolete=
|library_id=CNhs12196
|library_id_phase_based=2:CNhs12196
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11309
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11309
|name=Dendritic Cells - plasmacytoid, donor2
|name=Dendritic Cells - plasmacytoid, donor2
|namespace=FANTOM5
|namespace=FANTOM5
Line 41: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12196,LSID976,release010,COMPLETED
|profile_hcage=CNhs12196,LSID976,release010,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=117
|rna_box=117
|rna_catalog_number=3H100-72-5
|rna_catalog_number=3H100-72-5
Line 56: Line 79:
|rna_weight_ug=1
|rna_weight_ug=1
|sample_age=25
|sample_age=25
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 68: Line 92:
|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.92463558879924e-207!GO:0043227;membrane-bound organelle;1.28883155276461e-184!GO:0043231;intracellular membrane-bound organelle;2.26658912624129e-184!GO:0043226;organelle;1.71049140445764e-170!GO:0043229;intracellular organelle;7.03173327904729e-170!GO:0005737;cytoplasm;2.02249041425877e-137!GO:0044422;organelle part;4.94143612108463e-111!GO:0044446;intracellular organelle part;2.12394328949377e-109!GO:0044444;cytoplasmic part;1.90878382377973e-101!GO:0044237;cellular metabolic process;1.68279193737357e-92!GO:0043170;macromolecule metabolic process;3.86282705382459e-90!GO:0044238;primary metabolic process;6.9070475157172e-89!GO:0005634;nucleus;3.6586433677409e-86!GO:0032991;macromolecular complex;6.96740192248593e-86!GO:0003723;RNA binding;9.71147604759251e-76!GO:0044428;nuclear part;2.8160910751978e-73!GO:0030529;ribonucleoprotein complex;1.24453697106211e-72!GO:0043233;organelle lumen;4.23097550094194e-63!GO:0031974;membrane-enclosed lumen;4.23097550094194e-63!GO:0043283;biopolymer metabolic process;7.6944653804109e-59!GO:0005515;protein binding;1.55444369419621e-56!GO:0010467;gene expression;1.50673007876798e-52!GO:0006396;RNA processing;1.84542317428493e-50!GO:0019538;protein metabolic process;6.57053517375422e-49!GO:0006412;translation;8.07965175464085e-48!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.97723173117338e-47!GO:0005739;mitochondrion;8.82784466586296e-47!GO:0044267;cellular protein metabolic process;1.68542707072818e-46!GO:0044260;cellular macromolecule metabolic process;1.67784519103572e-45!GO:0031981;nuclear lumen;2.39276406050738e-44!GO:0033036;macromolecule localization;1.48410342434595e-43!GO:0043234;protein complex;1.48410342434595e-43!GO:0016071;mRNA metabolic process;5.04408008741585e-43!GO:0031090;organelle membrane;1.2953025876415e-42!GO:0015031;protein transport;1.5178684274298e-42!GO:0045184;establishment of protein localization;1.7655536711526e-40!GO:0008104;protein localization;1.73977388569004e-39!GO:0005840;ribosome;3.03005808357937e-39!GO:0008380;RNA splicing;1.8251913758579e-38!GO:0009059;macromolecule biosynthetic process;6.791233284459e-38!GO:0006397;mRNA processing;2.12466642530117e-36!GO:0031967;organelle envelope;8.48723636831267e-36!GO:0031975;envelope;1.8003805346857e-35!GO:0003735;structural constituent of ribosome;4.20357432571197e-34!GO:0003676;nucleic acid binding;1.45340610364176e-33!GO:0044429;mitochondrial part;1.82324965143265e-33!GO:0033279;ribosomal subunit;3.47984497132319e-33!GO:0005829;cytosol;9.03214522553117e-33!GO:0009058;biosynthetic process;9.55048901036527e-31!GO:0044249;cellular biosynthetic process;3.34136573390176e-30!GO:0016043;cellular component organization and biogenesis;4.0480836326727e-30!GO:0065003;macromolecular complex assembly;7.02482884503406e-29!GO:0005654;nucleoplasm;1.60170977603761e-28!GO:0006886;intracellular protein transport;1.89159480171804e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.28691586523672e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.78910819941128e-28!GO:0005681;spliceosome;3.79965815229232e-28!GO:0046907;intracellular transport;3.96510115277091e-27!GO:0016070;RNA metabolic process;3.96510115277091e-27!GO:0044445;cytosolic part;1.48507764315512e-24!GO:0006259;DNA metabolic process;2.46979438222977e-24!GO:0022607;cellular component assembly;4.92321395076878e-24!GO:0019866;organelle inner membrane;2.00806964241134e-23!GO:0044451;nucleoplasm part;3.22408393158293e-23!GO:0006512;ubiquitin cycle;7.62613401158016e-23!GO:0005740;mitochondrial envelope;1.2711872912443e-22!GO:0044265;cellular macromolecule catabolic process;4.24055192198117e-22!GO:0031966;mitochondrial membrane;7.91101463529813e-22!GO:0012501;programmed cell death;4.42224937822427e-21!GO:0006915;apoptosis;5.20421399373928e-21!GO:0005743;mitochondrial inner membrane;6.78819126462077e-21!GO:0044257;cellular protein catabolic process;1.17319918309293e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;1.21557070357671e-20!GO:0006996;organelle organization and biogenesis;1.52983781541928e-20!GO:0019941;modification-dependent protein catabolic process;1.75560119114615e-20!GO:0043632;modification-dependent macromolecule catabolic process;1.75560119114615e-20!GO:0006119;oxidative phosphorylation;2.90771608801494e-20!GO:0006511;ubiquitin-dependent protein catabolic process;4.36281387000976e-20!GO:0008219;cell death;1.1539070739737e-19!GO:0016265;death;1.1539070739737e-19!GO:0043285;biopolymer catabolic process;2.00228502312029e-19!GO:0051641;cellular localization;2.36913965171506e-19!GO:0051649;establishment of cellular localization;2.54590414071278e-19!GO:0043412;biopolymer modification;4.86747108327377e-19!GO:0022618;protein-RNA complex assembly;5.03223266627321e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.96577579350956e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;5.31370436050625e-18!GO:0016462;pyrophosphatase activity;5.68618435838407e-18!GO:0000166;nucleotide binding;5.80662432089003e-18!GO:0044455;mitochondrial membrane part;1.0548922621099e-17!GO:0008134;transcription factor binding;1.21963309260356e-17!GO:0015935;small ribosomal subunit;2.11881021977932e-17!GO:0017111;nucleoside-triphosphatase activity;2.61172211826875e-17!GO:0009057;macromolecule catabolic process;4.88705811030197e-17!GO:0012505;endomembrane system;6.44198687783626e-17!GO:0016604;nuclear body;6.58346187511111e-17!GO:0015934;large ribosomal subunit;7.84493852379386e-17!GO:0006464;protein modification process;1.26407427476797e-16!GO:0044248;cellular catabolic process;3.51007062818515e-16!GO:0005730;nucleolus;4.7762088935617e-16!GO:0016874;ligase activity;1.68859341397552e-15!GO:0048770;pigment granule;1.92527903450928e-15!GO:0042470;melanosome;1.92527903450928e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.19922207013113e-15!GO:0006605;protein targeting;2.5157683696441e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.51107189297502e-15!GO:0030163;protein catabolic process;4.0642208499912e-15!GO:0043687;post-translational protein modification;8.09877486204891e-15!GO:0005746;mitochondrial respiratory chain;1.13919718143753e-14!GO:0006457;protein folding;1.44356302210208e-14!GO:0008135;translation factor activity, nucleic acid binding;2.71406666210105e-14!GO:0016607;nuclear speck;3.31813596722051e-14!GO:0042981;regulation of apoptosis;9.10929616330372e-14!GO:0006974;response to DNA damage stimulus;9.31728181463681e-14!GO:0043067;regulation of programmed cell death;1.23519088131593e-13!GO:0016887;ATPase activity;1.77362104461579e-13!GO:0042623;ATPase activity, coupled;2.02015233641171e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.02015233641171e-13!GO:0031980;mitochondrial lumen;2.75286416382185e-13!GO:0005759;mitochondrial matrix;2.75286416382185e-13!GO:0050794;regulation of cellular process;3.73457258303557e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.8659570019968e-13!GO:0003954;NADH dehydrogenase activity;3.8659570019968e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.8659570019968e-13!GO:0005635;nuclear envelope;3.8659570019968e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.89452375277305e-13!GO:0043228;non-membrane-bound organelle;4.33775316143543e-13!GO:0043232;intracellular non-membrane-bound organelle;4.33775316143543e-13!GO:0006913;nucleocytoplasmic transport;4.45774959644107e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;6.44567182657606e-13!GO:0000375;RNA splicing, via transesterification reactions;6.44567182657606e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.44567182657606e-13!GO:0031965;nuclear membrane;7.55497888659154e-13!GO:0051169;nuclear transport;9.2663625919185e-13!GO:0006413;translational initiation;9.751449791906e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;1.01765565567542e-12!GO:0016192;vesicle-mediated transport;1.72625368837074e-12!GO:0032553;ribonucleotide binding;3.46646451514592e-12!GO:0032555;purine ribonucleotide binding;3.46646451514592e-12!GO:0006323;DNA packaging;4.77297195293407e-12!GO:0007049;cell cycle;5.46354081148163e-12!GO:0017076;purine nucleotide binding;8.63300179392104e-12!GO:0044453;nuclear membrane part;1.03777766169386e-11!GO:0005794;Golgi apparatus;1.2014441344415e-11!GO:0005783;endoplasmic reticulum;1.61606262164087e-11!GO:0051276;chromosome organization and biogenesis;1.67242755888516e-11!GO:0006281;DNA repair;1.69763854332839e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.04459436320764e-11!GO:0042773;ATP synthesis coupled electron transport;2.04459436320764e-11!GO:0006446;regulation of translational initiation;2.06366951223526e-11!GO:0003743;translation initiation factor activity;2.25333390894116e-11!GO:0030964;NADH dehydrogenase complex (quinone);3.88755242674737e-11!GO:0045271;respiratory chain complex I;3.88755242674737e-11!GO:0005747;mitochondrial respiratory chain complex I;3.88755242674737e-11!GO:0005524;ATP binding;4.30201445146069e-11!GO:0032559;adenyl ribonucleotide binding;6.27703392010552e-11!GO:0051082;unfolded protein binding;6.92176856938201e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.03419496681914e-10!GO:0044432;endoplasmic reticulum part;1.24534627770672e-10!GO:0005773;vacuole;1.25521380719199e-10!GO:0004386;helicase activity;1.25986206552472e-10!GO:0003712;transcription cofactor activity;1.26660113543513e-10!GO:0042254;ribosome biogenesis and assembly;1.49689622618283e-10!GO:0006403;RNA localization;1.80097918764506e-10!GO:0050657;nucleic acid transport;1.9302610251054e-10!GO:0051236;establishment of RNA localization;1.9302610251054e-10!GO:0050658;RNA transport;1.9302610251054e-10!GO:0017038;protein import;1.9540028130099e-10!GO:0030554;adenyl nucleotide binding;2.28578425797607e-10!GO:0019222;regulation of metabolic process;2.85215197346429e-10!GO:0006793;phosphorus metabolic process;3.12962408059485e-10!GO:0006796;phosphate metabolic process;3.12962408059485e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.33440587761643e-10!GO:0008639;small protein conjugating enzyme activity;4.59808547149358e-10!GO:0008026;ATP-dependent helicase activity;5.67626167204845e-10!GO:0004842;ubiquitin-protein ligase activity;5.95078224275394e-10!GO:0051186;cofactor metabolic process;8.12706010963182e-10!GO:0000323;lytic vacuole;1.05083202332141e-09!GO:0005764;lysosome;1.05083202332141e-09!GO:0016787;hydrolase activity;1.27223811008026e-09!GO:0019829;cation-transporting ATPase activity;1.30252687040953e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.66634196184131e-09!GO:0051246;regulation of protein metabolic process;2.21074584809777e-09!GO:0065004;protein-DNA complex assembly;2.35800712999005e-09!GO:0005768;endosome;2.43034815338438e-09!GO:0048193;Golgi vesicle transport;2.45789843362434e-09!GO:0048523;negative regulation of cellular process;2.64196404467057e-09!GO:0005643;nuclear pore;2.71454105034457e-09!GO:0009259;ribonucleotide metabolic process;2.89866680586663e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.07409855430774e-09!GO:0065002;intracellular protein transport across a membrane;3.21944972271963e-09!GO:0009056;catabolic process;3.72955505326919e-09!GO:0008565;protein transporter activity;3.81772936494582e-09!GO:0005761;mitochondrial ribosome;3.97921609223021e-09!GO:0000313;organellar ribosome;3.97921609223021e-09!GO:0019787;small conjugating protein ligase activity;4.09035590696643e-09!GO:0015078;hydrogen ion transmembrane transporter activity;4.53867956933571e-09!GO:0016568;chromatin modification;6.00941509318717e-09!GO:0050789;regulation of biological process;8.44257515565508e-09!GO:0051028;mRNA transport;8.6683316040707e-09!GO:0006333;chromatin assembly or disassembly;8.87230324177262e-09!GO:0016310;phosphorylation;9.11486080805362e-09!GO:0051726;regulation of cell cycle;9.52665409696538e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.52665409696538e-09!GO:0043069;negative regulation of programmed cell death;1.12896077372415e-08!GO:0000074;regulation of progression through cell cycle;1.18291219509502e-08!GO:0005694;chromosome;1.19588740012764e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.23032908482935e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.25799406078635e-08!GO:0006163;purine nucleotide metabolic process;1.38600032954582e-08!GO:0031323;regulation of cellular metabolic process;1.60728064995509e-08!GO:0006732;coenzyme metabolic process;1.85035669172375e-08!GO:0009150;purine ribonucleotide metabolic process;1.91461543168606e-08!GO:0043066;negative regulation of apoptosis;1.96831770157548e-08!GO:0009719;response to endogenous stimulus;2.07954588713088e-08!GO:0009260;ribonucleotide biosynthetic process;2.224068349299e-08!GO:0003713;transcription coactivator activity;2.23158769881356e-08!GO:0006366;transcription from RNA polymerase II promoter;2.34446088409727e-08!GO:0015986;ATP synthesis coupled proton transport;2.6148276452298e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.6148276452298e-08!GO:0006164;purine nucleotide biosynthetic process;3.01377931529863e-08!GO:0065009;regulation of a molecular function;3.06111438520907e-08!GO:0007243;protein kinase cascade;3.52034664817457e-08!GO:0005839;proteasome core complex (sensu Eukaryota);3.53448638295998e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.92804448845295e-08!GO:0005789;endoplasmic reticulum membrane;4.11668226284671e-08!GO:0022402;cell cycle process;4.54509129499586e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.66749740579973e-08!GO:0046930;pore complex;4.70087922779329e-08!GO:0004298;threonine endopeptidase activity;6.20221094259174e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.93840654632085e-08!GO:0048519;negative regulation of biological process;6.9881977632686e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.06340500076119e-08!GO:0009615;response to virus;8.86249060090208e-08!GO:0051170;nuclear import;1.39649273652491e-07!GO:0006606;protein import into nucleus;1.61592379987381e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.81282066384587e-07!GO:0009141;nucleoside triphosphate metabolic process;1.85156570001317e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.85156570001317e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.03464003473759e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.09454237995847e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.09454237995847e-07!GO:0016072;rRNA metabolic process;2.17945867887385e-07!GO:0016563;transcription activator activity;2.25766882481708e-07!GO:0006754;ATP biosynthetic process;2.32158665094073e-07!GO:0006753;nucleoside phosphate metabolic process;2.32158665094073e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.64649678817019e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.01172024708216e-07!GO:0046034;ATP metabolic process;3.52940904590186e-07!GO:0006364;rRNA processing;3.55968899589652e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.55968899589652e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.55968899589652e-07!GO:0005793;ER-Golgi intermediate compartment;3.61891043721094e-07!GO:0009060;aerobic respiration;3.69583825362356e-07!GO:0006417;regulation of translation;3.72363172586884e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.72627998167191e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.72627998167191e-07!GO:0016881;acid-amino acid ligase activity;4.96556411093641e-07!GO:0006399;tRNA metabolic process;6.44842816995209e-07!GO:0009055;electron carrier activity;6.62145774296178e-07!GO:0006916;anti-apoptosis;7.34434953527264e-07!GO:0044427;chromosomal part;7.46892295713793e-07!GO:0010468;regulation of gene expression;7.54422957623023e-07!GO:0005770;late endosome;1.0145068603317e-06!GO:0000785;chromatin;1.03609909046969e-06!GO:0006401;RNA catabolic process;1.12790198231821e-06!GO:0000151;ubiquitin ligase complex;1.20390396609572e-06!GO:0043566;structure-specific DNA binding;1.28202739371822e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.47176687156938e-06!GO:0031324;negative regulation of cellular metabolic process;1.49033530081751e-06!GO:0006350;transcription;1.53870788000045e-06!GO:0032446;protein modification by small protein conjugation;1.63332061982896e-06!GO:0006461;protein complex assembly;1.74473250615239e-06!GO:0007005;mitochondrion organization and biogenesis;1.84812326377851e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.45267865074827e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.45267865074827e-06!GO:0015399;primary active transmembrane transporter activity;2.45267865074827e-06!GO:0016567;protein ubiquitination;2.50992173241394e-06!GO:0045259;proton-transporting ATP synthase complex;2.72963357177087e-06!GO:0003697;single-stranded DNA binding;2.86804886230639e-06!GO:0045333;cellular respiration;3.25044460507258e-06!GO:0045786;negative regulation of progression through cell cycle;3.4372575711287e-06!GO:0007242;intracellular signaling cascade;4.12924122934759e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.46333971965311e-06!GO:0065007;biological regulation;4.60113290491069e-06!GO:0016740;transferase activity;5.27488329520085e-06!GO:0031326;regulation of cellular biosynthetic process;5.82531844182006e-06!GO:0051188;cofactor biosynthetic process;6.51135454773944e-06!GO:0044440;endosomal part;6.79662939791796e-06!GO:0010008;endosome membrane;6.79662939791796e-06!GO:0050790;regulation of catalytic activity;7.05153225879421e-06!GO:0006613;cotranslational protein targeting to membrane;8.02593245971276e-06!GO:0043065;positive regulation of apoptosis;8.09717611841116e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.73135326808811e-06!GO:0005774;vacuolar membrane;9.98313264643325e-06!GO:0006334;nucleosome assembly;1.04522383691654e-05!GO:0019899;enzyme binding;1.05447419770678e-05!GO:0006260;DNA replication;1.10159534234742e-05!GO:0003724;RNA helicase activity;1.12697962871737e-05!GO:0043068;positive regulation of programmed cell death;1.21053695682285e-05!GO:0000245;spliceosome assembly;1.21053695682285e-05!GO:0006752;group transfer coenzyme metabolic process;1.64532730668185e-05!GO:0006917;induction of apoptosis;1.91880343083465e-05!GO:0006099;tricarboxylic acid cycle;2.20419004520671e-05!GO:0046356;acetyl-CoA catabolic process;2.20419004520671e-05!GO:0009108;coenzyme biosynthetic process;2.23449238925706e-05!GO:0009117;nucleotide metabolic process;2.4390482016534e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.60276765874577e-05!GO:0031497;chromatin assembly;2.64480000929457e-05!GO:0012502;induction of programmed cell death;2.84493805943992e-05!GO:0016564;transcription repressor activity;2.86701837238568e-05!GO:0006950;response to stress;3.30104864479982e-05!GO:0044437;vacuolar part;3.34959212954548e-05!GO:0006402;mRNA catabolic process;3.44777923054293e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.5244501766141e-05!GO:0016779;nucleotidyltransferase activity;3.55995063803405e-05!GO:0005765;lysosomal membrane;3.7617195923695e-05!GO:0009889;regulation of biosynthetic process;4.16498234951279e-05!GO:0051168;nuclear export;4.41329948780138e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.0694262514763e-05!GO:0009892;negative regulation of metabolic process;5.13206320394919e-05!GO:0008234;cysteine-type peptidase activity;5.48300973592819e-05!GO:0006084;acetyl-CoA metabolic process;7.20396644104041e-05!GO:0043492;ATPase activity, coupled to movement of substances;7.62612192473916e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;7.81619124470625e-05!GO:0008632;apoptotic program;8.09705236914498e-05!GO:0048475;coated membrane;8.72989062378586e-05!GO:0030117;membrane coat;8.72989062378586e-05!GO:0006352;transcription initiation;8.81626063263465e-05!GO:0030120;vesicle coat;8.93731967222352e-05!GO:0030662;coated vesicle membrane;8.93731967222352e-05!GO:0008654;phospholipid biosynthetic process;0.000106151487504348!GO:0005813;centrosome;0.000107265016419082!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000108387324604737!GO:0032774;RNA biosynthetic process;0.000127165088433466!GO:0009109;coenzyme catabolic process;0.000143577830713561!GO:0006351;transcription, DNA-dependent;0.000145243383935695!GO:0016481;negative regulation of transcription;0.000150882435007541!GO:0044431;Golgi apparatus part;0.000171897961018452!GO:0016363;nuclear matrix;0.0001754852637655!GO:0005885;Arp2/3 protein complex;0.00021098835670967!GO:0000278;mitotic cell cycle;0.000220456738703978!GO:0051187;cofactor catabolic process;0.000233059073646052!GO:0003729;mRNA binding;0.000234740789936817!GO:0006818;hydrogen transport;0.000247422918452091!GO:0008186;RNA-dependent ATPase activity;0.000247787614805935!GO:0005815;microtubule organizing center;0.000248774097521316!GO:0045449;regulation of transcription;0.000249092198452583!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000251107663323528!GO:0004812;aminoacyl-tRNA ligase activity;0.000251107663323528!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000251107663323528!GO:0022890;inorganic cation transmembrane transporter activity;0.000255299022646932!GO:0051427;hormone receptor binding;0.000258009906345152!GO:0015992;proton transport;0.000320302376914531!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000324114841151175!GO:0006261;DNA-dependent DNA replication;0.000348374866052037!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000360069041152677!GO:0048522;positive regulation of cellular process;0.000379897229713297!GO:0006612;protein targeting to membrane;0.000382035890375504!GO:0009967;positive regulation of signal transduction;0.000395334113264914!GO:0031072;heat shock protein binding;0.000412069672666444!GO:0005667;transcription factor complex;0.000421144900503348!GO:0035257;nuclear hormone receptor binding;0.000471509649325536!GO:0031982;vesicle;0.000478620490959318!GO:0003924;GTPase activity;0.000479710472291798!GO:0043038;amino acid activation;0.000486539902749541!GO:0006418;tRNA aminoacylation for protein translation;0.000486539902749541!GO:0043039;tRNA aminoacylation;0.000486539902749541!GO:0051336;regulation of hydrolase activity;0.000516738208966002!GO:0030384;phosphoinositide metabolic process;0.000580609037558859!GO:0043021;ribonucleoprotein binding;0.000600339349973261!GO:0043623;cellular protein complex assembly;0.000644843688196996!GO:0008047;enzyme activator activity;0.000644843688196996!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00064588912953746!GO:0030176;integral to endoplasmic reticulum membrane;0.000724732711624336!GO:0004004;ATP-dependent RNA helicase activity;0.000727449282125803!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000748439044047996!GO:0033116;ER-Golgi intermediate compartment membrane;0.000760753660002115!GO:0046489;phosphoinositide biosynthetic process;0.00078812516890596!GO:0009165;nucleotide biosynthetic process;0.00078812516890596!GO:0016251;general RNA polymerase II transcription factor activity;0.000838169889908288!GO:0008270;zinc ion binding;0.000918660941307546!GO:0031902;late endosome membrane;0.000920393720767093!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000979634345154149!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000981260966830182!GO:0016197;endosome transport;0.000982435524355954!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000992844790259222!GO:0004518;nuclease activity;0.00105427580644523!GO:0046474;glycerophospholipid biosynthetic process;0.00105427580644523!GO:0043681;protein import into mitochondrion;0.00105847630850895!GO:0005762;mitochondrial large ribosomal subunit;0.0010800546850799!GO:0000315;organellar large ribosomal subunit;0.0010800546850799!GO:0006414;translational elongation;0.00108927585742467!GO:0003711;transcription elongation regulator activity;0.00111782068930239!GO:0002376;immune system process;0.00114625320420024!GO:0005769;early endosome;0.0011654425011662!GO:0016044;membrane organization and biogenesis;0.00127404400378043!GO:0031410;cytoplasmic vesicle;0.00132259913659876!GO:0003725;double-stranded RNA binding;0.00136657410642959!GO:0005798;Golgi-associated vesicle;0.00146946207741735!GO:0005788;endoplasmic reticulum lumen;0.00149348046480852!GO:0006650;glycerophospholipid metabolic process;0.00150397203801167!GO:0045454;cell redox homeostasis;0.00165556786213753!GO:0030433;ER-associated protein catabolic process;0.00166583792785758!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00166583792785758!GO:0008033;tRNA processing;0.00169576544784699!GO:0003899;DNA-directed RNA polymerase activity;0.00169576544784699!GO:0006672;ceramide metabolic process;0.00189050740410245!GO:0007034;vacuolar transport;0.00189142261879677!GO:0051789;response to protein stimulus;0.00210418556737882!GO:0006986;response to unfolded protein;0.00210418556737882!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00215050155952601!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00218813482436392!GO:0003690;double-stranded DNA binding;0.00224754325176976!GO:0007264;small GTPase mediated signal transduction;0.00233977649993251!GO:0005525;GTP binding;0.00235289394347594!GO:0004527;exonuclease activity;0.00242304701607377!GO:0046966;thyroid hormone receptor binding;0.00246050050807142!GO:0043488;regulation of mRNA stability;0.00250221396289409!GO:0043487;regulation of RNA stability;0.00250221396289409!GO:0003714;transcription corepressor activity;0.0025106898523665!GO:0015631;tubulin binding;0.00271511773220815!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00273312979553619!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00273312979553619!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00273312979553619!GO:0051252;regulation of RNA metabolic process;0.00275722805113643!GO:0006355;regulation of transcription, DNA-dependent;0.00281611256402754!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00290702331859306!GO:0046519;sphingoid metabolic process;0.00296197764792564!GO:0009607;response to biotic stimulus;0.00297581651150498!GO:0005637;nuclear inner membrane;0.0031805532681862!GO:0031252;leading edge;0.00323458820800592!GO:0048471;perinuclear region of cytoplasm;0.00333367060542875!GO:0019843;rRNA binding;0.00337457138863475!GO:0006310;DNA recombination;0.00339224515998793!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00342156895153685!GO:0004667;prostaglandin-D synthase activity;0.00342156895153685!GO:0050802;circadian sleep/wake cycle, sleep;0.00342156895153685!GO:0022410;circadian sleep/wake cycle process;0.00342156895153685!GO:0042749;regulation of circadian sleep/wake cycle;0.00342156895153685!GO:0000139;Golgi membrane;0.00376458408686379!GO:0042613;MHC class II protein complex;0.00390128926644429!GO:0046467;membrane lipid biosynthetic process;0.00394016217338614!GO:0006405;RNA export from nucleus;0.00399959784427869!GO:0019783;small conjugating protein-specific protease activity;0.00403817856887371!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00411727180260083!GO:0046914;transition metal ion binding;0.00426117997325893!GO:0022415;viral reproductive process;0.00458385079309084!GO:0046822;regulation of nucleocytoplasmic transport;0.00463654951200193!GO:0004674;protein serine/threonine kinase activity;0.00476170098346189!GO:0016859;cis-trans isomerase activity;0.00482680338439503!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00482680338439503!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00482680338439503!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00482680338439503!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00488825366569366!GO:0015002;heme-copper terminal oxidase activity;0.00488825366569366!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00488825366569366!GO:0004129;cytochrome-c oxidase activity;0.00488825366569366!GO:0048500;signal recognition particle;0.00492750221380805!GO:0016853;isomerase activity;0.0050138872694003!GO:0048518;positive regulation of biological process;0.00503629480360887!GO:0006607;NLS-bearing substrate import into nucleus;0.00509057967542029!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00523802475854505!GO:0006611;protein export from nucleus;0.00526542981247089!GO:0003677;DNA binding;0.0053133895733683!GO:0031988;membrane-bound vesicle;0.00546004998563154!GO:0005048;signal sequence binding;0.00550730039004972!GO:0007006;mitochondrial membrane organization and biogenesis;0.00570680407660894!GO:0007050;cell cycle arrest;0.00575647782341916!GO:0008637;apoptotic mitochondrial changes;0.00582563762370005!GO:0004843;ubiquitin-specific protease activity;0.00585411985833428!GO:0005684;U2-dependent spliceosome;0.00598454222277736!GO:0018193;peptidyl-amino acid modification;0.00614466717185459!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00615663348871612!GO:0044452;nucleolar part;0.00617831850294372!GO:0006891;intra-Golgi vesicle-mediated transport;0.00629980711995849!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0063979008978142!GO:0045047;protein targeting to ER;0.0063979008978142!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00643321771913652!GO:0031968;organelle outer membrane;0.0065447954232874!GO:0000786;nucleosome;0.00663315809128018!GO:0006091;generation of precursor metabolites and energy;0.00676308139459816!GO:0006626;protein targeting to mitochondrion;0.00706643516954249!GO:0004197;cysteine-type endopeptidase activity;0.00706670271186053!GO:0016584;nucleosome positioning;0.00720510602598336!GO:0000314;organellar small ribosomal subunit;0.00720510602598336!GO:0005763;mitochondrial small ribosomal subunit;0.00720510602598336!GO:0006595;polyamine metabolic process;0.00734070810764998!GO:0043087;regulation of GTPase activity;0.00735207107931232!GO:0051338;regulation of transferase activity;0.00741500006440369!GO:0031625;ubiquitin protein ligase binding;0.00758858565962638!GO:0006383;transcription from RNA polymerase III promoter;0.00785531746432708!GO:0060090;molecular adaptor activity;0.00794911251310393!GO:0030041;actin filament polymerization;0.0079681938046314!GO:0005669;transcription factor TFIID complex;0.00818893173780929!GO:0019867;outer membrane;0.00845674597360052!GO:0030521;androgen receptor signaling pathway;0.00850714107357015!GO:0009966;regulation of signal transduction;0.00861414791572966!GO:0032940;secretion by cell;0.0086416137348307!GO:0006302;double-strand break repair;0.00870048113036301!GO:0043022;ribosome binding;0.00919328720669094!GO:0048468;cell development;0.00965132310878942!GO:0007040;lysosome organization and biogenesis;0.00982743093500055!GO:0017091;AU-rich element binding;0.00992413401915664!GO:0050779;RNA destabilization;0.00992413401915664!GO:0000289;poly(A) tail shortening;0.00992413401915664!GO:0016023;cytoplasmic membrane-bound vesicle;0.0100827816439732!GO:0007265;Ras protein signal transduction;0.0101158033206703!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0101255053792701!GO:0045045;secretory pathway;0.0103361437939244!GO:0003678;DNA helicase activity;0.0103978928711093!GO:0047485;protein N-terminus binding;0.0105321507806091!GO:0006506;GPI anchor biosynthetic process;0.0107418569059891!GO:0008168;methyltransferase activity;0.0107439280975606!GO:0004221;ubiquitin thiolesterase activity;0.0107934712032603!GO:0008139;nuclear localization sequence binding;0.0108441621484845!GO:0051920;peroxiredoxin activity;0.0108441621484845!GO:0007041;lysosomal transport;0.0108441621484845!GO:0008287;protein serine/threonine phosphatase complex;0.0109145066196143!GO:0051087;chaperone binding;0.0114119617459384!GO:0016272;prefoldin complex;0.011444160457525!GO:0043549;regulation of kinase activity;0.0114869790777686!GO:0016741;transferase activity, transferring one-carbon groups;0.012400556582604!GO:0006904;vesicle docking during exocytosis;0.0125387951408011!GO:0015923;mannosidase activity;0.0126477454284204!GO:0022406;membrane docking;0.0126510421369879!GO:0048278;vesicle docking;0.0126510421369879!GO:0030518;steroid hormone receptor signaling pathway;0.0126646645111323!GO:0008312;7S RNA binding;0.0129277635313209!GO:0022403;cell cycle phase;0.0129277635313209!GO:0030658;transport vesicle membrane;0.0129722387421897!GO:0004576;oligosaccharyl transferase activity;0.0130468691309305!GO:0051052;regulation of DNA metabolic process;0.0132229772129029!GO:0008017;microtubule binding;0.0132818028747177!GO:0008320;protein transmembrane transporter activity;0.013781482478778!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0141473322829606!GO:0030258;lipid modification;0.0141473322829606!GO:0004722;protein serine/threonine phosphatase activity;0.0142393103175996!GO:0006497;protein amino acid lipidation;0.0146938558199034!GO:0006505;GPI anchor metabolic process;0.0148028449510122!GO:0030695;GTPase regulator activity;0.0150121155832686!GO:0051301;cell division;0.015050713668344!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.015050713668344!GO:0000118;histone deacetylase complex;0.0150596937256803!GO:0045947;negative regulation of translational initiation;0.015095318467727!GO:0051325;interphase;0.0153011225072976!GO:0043281;regulation of caspase activity;0.0155404803836266!GO:0051235;maintenance of localization;0.0155882955157526!GO:0007033;vacuole organization and biogenesis;0.0156398826133659!GO:0005741;mitochondrial outer membrane;0.0156398826133659!GO:0044262;cellular carbohydrate metabolic process;0.0156398826133659!GO:0006376;mRNA splice site selection;0.0159532343248565!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0159532343248565!GO:0015980;energy derivation by oxidation of organic compounds;0.0162054220913042!GO:0051329;interphase of mitotic cell cycle;0.0162385807853562!GO:0051223;regulation of protein transport;0.0162385807853562!GO:0032561;guanyl ribonucleotide binding;0.0166684992658815!GO:0019001;guanyl nucleotide binding;0.0166684992658815!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0167154306399951!GO:0045859;regulation of protein kinase activity;0.0176454432371983!GO:0019904;protein domain specific binding;0.0184654778862006!GO:0030968;unfolded protein response;0.0185635611695458!GO:0048487;beta-tubulin binding;0.0187870956182988!GO:0005070;SH3/SH2 adaptor activity;0.0188546674852782!GO:0006984;ER-nuclear signaling pathway;0.0190299404512793!GO:0005096;GTPase activator activity;0.0192405602694194!GO:0016790;thiolester hydrolase activity;0.0193967750212506!GO:0006643;membrane lipid metabolic process;0.0197960047439967!GO:0001667;ameboidal cell migration;0.0199987213820439!GO:0032027;myosin light chain binding;0.0199987213820439!GO:0003682;chromatin binding;0.020854656240762!GO:0030880;RNA polymerase complex;0.0209621042407819!GO:0016605;PML body;0.0215796679659932!GO:0030127;COPII vesicle coat;0.0216952578139194!GO:0012507;ER to Golgi transport vesicle membrane;0.0216952578139194!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0218294715300616!GO:0030867;rough endoplasmic reticulum membrane;0.0220623860963322!GO:0008097;5S rRNA binding;0.0220623860963322!GO:0051090;regulation of transcription factor activity;0.0220623860963322!GO:0005819;spindle;0.0221952583074659!GO:0008250;oligosaccharyl transferase complex;0.0222296577338557!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.022506181344728!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0226497526257152!GO:0006338;chromatin remodeling;0.0228803623967243!GO:0032318;regulation of Ras GTPase activity;0.0229514666623649!GO:0030134;ER to Golgi transport vesicle;0.0230374707948204!GO:0000049;tRNA binding;0.0230621235127144!GO:0006354;RNA elongation;0.0235303266152592!GO:0030097;hemopoiesis;0.023762524360856!GO:0000082;G1/S transition of mitotic cell cycle;0.0238800389031879!GO:0004278;granzyme B activity;0.0240416424857741!GO:0005791;rough endoplasmic reticulum;0.0241339522883371!GO:0022884;macromolecule transmembrane transporter activity;0.0243428965968631!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0243428965968631!GO:0005869;dynactin complex;0.0244415583572056!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0245124543434434!GO:0042802;identical protein binding;0.0248391053166392!GO:0004177;aminopeptidase activity;0.0249711309319187!GO:0009893;positive regulation of metabolic process;0.0249928859350919!GO:0031901;early endosome membrane;0.0251804594332288!GO:0030522;intracellular receptor-mediated signaling pathway;0.0258819618165757!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0261545877679562!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0263407374597234!GO:0022411;cellular component disassembly;0.0264302605890644!GO:0030660;Golgi-associated vesicle membrane;0.0266077145725152!GO:0006516;glycoprotein catabolic process;0.0267147952521484!GO:0019883;antigen processing and presentation of endogenous antigen;0.0268761754516707!GO:0008408;3'-5' exonuclease activity;0.0268882324481908!GO:0001836;release of cytochrome c from mitochondria;0.0273582972212057!GO:0033033;negative regulation of myeloid cell apoptosis;0.0276238296932772!GO:0001803;regulation of type III hypersensitivity;0.0276238296932772!GO:0032733;positive regulation of interleukin-10 production;0.0276238296932772!GO:0033025;regulation of mast cell apoptosis;0.0276238296932772!GO:0001805;positive regulation of type III hypersensitivity;0.0276238296932772!GO:0033023;mast cell homeostasis;0.0276238296932772!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0276238296932772!GO:0033032;regulation of myeloid cell apoptosis;0.0276238296932772!GO:0001802;type III hypersensitivity;0.0276238296932772!GO:0033028;myeloid cell apoptosis;0.0276238296932772!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0276238296932772!GO:0033026;negative regulation of mast cell apoptosis;0.0276238296932772!GO:0033024;mast cell apoptosis;0.0276238296932772!GO:0016311;dephosphorylation;0.0277296485150768!GO:0005657;replication fork;0.0283586341282903!GO:0016788;hydrolase activity, acting on ester bonds;0.0284502475340528!GO:0051092;activation of NF-kappaB transcription factor;0.0284983020246475!GO:0043284;biopolymer biosynthetic process;0.028615946939627!GO:0045185;maintenance of protein localization;0.0288959090764825!GO:0008159;positive transcription elongation factor activity;0.028896551094438!GO:0030663;COPI coated vesicle membrane;0.0291722660549278!GO:0030126;COPI vesicle coat;0.0291722660549278!GO:0000087;M phase of mitotic cell cycle;0.0296523030979385!GO:0005784;translocon complex;0.0300291096503915!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0300966463348651!GO:0002757;immune response-activating signal transduction;0.0302032342402297!GO:0006839;mitochondrial transport;0.0303239710587893!GO:0007067;mitosis;0.0306539193914588!GO:0045892;negative regulation of transcription, DNA-dependent;0.0315569723049399!GO:0042158;lipoprotein biosynthetic process;0.0315569723049399!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0318909998659824!GO:0000428;DNA-directed RNA polymerase complex;0.0318909998659824!GO:0006596;polyamine biosynthetic process;0.0318997771431245!GO:0004532;exoribonuclease activity;0.0324807931719623!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0324807931719623!GO:0006955;immune response;0.0328753840003831!GO:0019058;viral infectious cycle;0.0332688433011057!GO:0000059;protein import into nucleus, docking;0.0333302527460117!GO:0006919;caspase activation;0.0338461937398768!GO:0006897;endocytosis;0.0342253624409205!GO:0010324;membrane invagination;0.0342253624409205!GO:0007259;JAK-STAT cascade;0.0342658076767788!GO:0016860;intramolecular oxidoreductase activity;0.0344664486663382!GO:0016491;oxidoreductase activity;0.034953459615478!GO:0003684;damaged DNA binding;0.0356324210725214!GO:0018196;peptidyl-asparagine modification;0.0357404122065803!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0357404122065803!GO:0032200;telomere organization and biogenesis;0.0357404122065803!GO:0000723;telomere maintenance;0.0357404122065803!GO:0006275;regulation of DNA replication;0.0357939656835016!GO:0031124;mRNA 3'-end processing;0.0362543425810201!GO:0002764;immune response-regulating signal transduction;0.0362669393766379!GO:0050811;GABA receptor binding;0.03627816836072!GO:0033367;protein localization in mast cell secretory granule;0.03627816836072!GO:0033365;protein localization in organelle;0.03627816836072!GO:0033371;T cell secretory granule organization and biogenesis;0.03627816836072!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.03627816836072!GO:0033375;protease localization in T cell secretory granule;0.03627816836072!GO:0042629;mast cell granule;0.03627816836072!GO:0033377;maintenance of protein localization in T cell secretory granule;0.03627816836072!GO:0033364;mast cell secretory granule organization and biogenesis;0.03627816836072!GO:0033380;granzyme B localization in T cell secretory granule;0.03627816836072!GO:0033379;maintenance of protease localization in T cell secretory granule;0.03627816836072!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.03627816836072!GO:0033368;protease localization in mast cell secretory granule;0.03627816836072!GO:0033366;protein localization in secretory granule;0.03627816836072!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.03627816836072!GO:0033374;protein localization in T cell secretory granule;0.03627816836072!GO:0045321;leukocyte activation;0.0364457358904349!GO:0006914;autophagy;0.0376351116067165!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0379775188388149!GO:0045368;positive regulation of interleukin-13 biosynthetic process;0.0380476105672191!GO:0045366;regulation of interleukin-13 biosynthetic process;0.0380476105672191!GO:0000303;response to superoxide;0.038090804267771!GO:0004402;histone acetyltransferase activity;0.038090804267771!GO:0004468;lysine N-acetyltransferase activity;0.038090804267771!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0381461068446906!GO:0030036;actin cytoskeleton organization and biogenesis;0.0385083659163013!GO:0046979;TAP2 binding;0.0389459639705568!GO:0046977;TAP binding;0.0389459639705568!GO:0046978;TAP1 binding;0.0389459639705568!GO:0043306;positive regulation of mast cell degranulation;0.0389646254796893!GO:0045921;positive regulation of exocytosis;0.0389646254796893!GO:0043302;positive regulation of leukocyte degranulation;0.0389646254796893!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0394528480511428!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0397795510922054!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0397795510922054!GO:0003756;protein disulfide isomerase activity;0.039928658726124!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.039928658726124!GO:0007021;tubulin folding;0.0401114054261522!GO:0051101;regulation of DNA binding;0.0403030474063841!GO:0032507;maintenance of cellular protein localization;0.0409854720084212!GO:0031647;regulation of protein stability;0.0416695031873473!GO:0008629;induction of apoptosis by intracellular signals;0.0416695031873473!GO:0005083;small GTPase regulator activity;0.0418079966494495!GO:0016601;Rac protein signal transduction;0.0422286236152966!GO:0051098;regulation of binding;0.042597168953727!GO:0051059;NF-kappaB binding;0.0427872683434211!GO:0008624;induction of apoptosis by extracellular signals;0.0434984389934632!GO:0019210;kinase inhibitor activity;0.044037402871368!GO:0003746;translation elongation factor activity;0.044037402871368!GO:0019220;regulation of phosphate metabolic process;0.0450884475616299!GO:0051174;regulation of phosphorus metabolic process;0.0450884475616299!GO:0030149;sphingolipid catabolic process;0.0453527693609956!GO:0051539;4 iron, 4 sulfur cluster binding;0.045544036740335!GO:0000738;DNA catabolic process, exonucleolytic;0.0459927939326184!GO:0019747;regulation of isoprenoid metabolic process;0.0464521001598589!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0473326921635967!GO:0033157;regulation of intracellular protein transport;0.04739893209955!GO:0042306;regulation of protein import into nucleus;0.04739893209955!GO:0030118;clathrin coat;0.0477872877900131!GO:0008180;signalosome;0.0477872877900131!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0483094266458401!GO:0002819;regulation of adaptive immune response;0.0483094266458401!GO:0016791;phosphoric monoester hydrolase activity;0.0483357934708648!GO:0016301;kinase activity;0.0484271644691155!GO:0004540;ribonuclease activity;0.0484284101559443!GO:0000287;magnesium ion binding;0.0486189588124855!GO:0045941;positive regulation of transcription;0.0496656450905545!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0496656450905545!GO:0010257;NADH dehydrogenase complex assembly;0.0496656450905545!GO:0033108;mitochondrial respiratory chain complex assembly;0.0496656450905545!GO:0035258;steroid hormone receptor binding;0.0496656450905545!GO:0015036;disulfide oxidoreductase activity;0.0496707558784753
|sample_id=11309
|sample_id=11309
|sample_note=
|sample_note=
Line 75: Line 100:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=NANOG{mouse}:2.57587969066;NFKB1_REL_RELA:1.80664730403;LMO2:1.80468629243;SPI1:1.74136810079;CREB1:1.73484776298;ELF1,2,4:1.73012571436;ATF5_CREB3:1.66910898312;NFIL3:1.63299882414;DMAP1_NCOR{1,2}_SMARC:1.63008577529;FOXQ1:1.58674053278;RUNX1..3:1.53619101086;SPIB:1.50924486445;AIRE:1.44398208289;PAX2:1.4175371547;PAX6:1.37431025638;NANOG:1.34345924212;FOX{F1,F2,J1}:1.34075608552;TGIF1:1.33703132749;ETS1,2:1.32655481832;IRF1,2:1.32381366571;FOXN1:1.22424736379;EN1,2:1.20677420461;RFX2..5_RFXANK_RFXAP:1.16044206448;MYOD1:1.15434859607;IRF7:1.12234352474;ALX1:1.0540994213;HMX1:1.04252289522;ATF4:0.988497402191;CRX:0.962942958651;PDX1:0.87767105017;HIF1A:0.872759574495;ELK1,4_GABP{A,B1}:0.810938084646;TLX2:0.801607310574;BPTF:0.799152385521;MYFfamily:0.784914747443;POU2F1..3:0.719394397252;ATF6:0.717946437042;FOXA2:0.711269946699;FOXP3:0.684268037795;RBPJ:0.643598273265;NHLH1,2:0.643368346754;MYB:0.642098754189;FOXO1,3,4:0.605067310903;XBP1:0.546234885021;SREBF1,2:0.545907059201;SMAD1..7,9:0.50046833422;PAX3,7:0.491297952797;ZEB1:0.484055036895;RORA:0.483344272728;ZNF148:0.459925724116;BREu{core}:0.443622758976;MEF2{A,B,C,D}:0.435640359891;FOXD3:0.432364445295;POU5F1:0.429531266304;MAFB:0.42141436283;HMGA1,2:0.375823959498;ATF2:0.359468763807;TFAP4:0.352177806363;TAL1_TCF{3,4,12}:0.318401034766;OCT4_SOX2{dimer}:0.263524030373;ESRRA:0.260193807712;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.250479116397;NR5A1,2:0.243539409781;RXRA_VDR{dimer}:0.241318914265;SOX{8,9,10}:0.221605734044;BACH2:0.212700764726;GATA6:0.208415168635;NR6A1:0.177563423878;FOX{D1,D2}:0.175711235569;PPARG:0.170287272838;CEBPA,B_DDIT3:0.149197836702;FOSL2:0.147473193163;JUN:0.1385009443;SOX2:0.0782895646897;EP300:0.0765888553477;ESR1:0.0655450151651;SNAI1..3:0.0642063207558;GLI1..3:0.0618388018751;YY1:0.0558930051493;NFE2:0.027956871988;FOS_FOS{B,L1}_JUN{B,D}:0.0228447205493;LEF1_TCF7_TCF7L1,2:0.000902414675553;HOXA9_MEIS1:-0.0154409232922;HAND1,2:-0.0237906117396;HNF4A_NR2F1,2:-0.0489685035015;TFAP2{A,C}:-0.0517154485841;CUX2:-0.0520474159531;FOX{I1,J2}:-0.064564856406;HLF:-0.0762343090345;NFIX:-0.0971359310712;EVI1:-0.136100609757;NFATC1..3:-0.16303551784;HSF1,2:-0.182861286171;SOX17:-0.185882614717;bHLH_family:-0.201611907246;ZNF238:-0.224153912963;NFY{A,B,C}:-0.226620851394;STAT1,3:-0.229015872815;HNF1A:-0.260779042854;CDX1,2,4:-0.264314760329;FOXL1:-0.269264338091;T:-0.284716805734;EGR1..3:-0.312416318547;MED-1{core}:-0.352376314094;ZFP161:-0.366417617502;NKX2-3_NKX2-5:-0.366639125744;PAX8:-0.373108845474;AR:-0.380447352505;NRF1:-0.397411287005;RXR{A,B,G}:-0.423296830798;STAT2,4,6:-0.430884879325;E2F1..5:-0.431314375826;PRRX1,2:-0.437425171453;HOX{A4,D4}:-0.437979178555;NFE2L2:-0.439675241683;SOX5:-0.457018640118;ALX4:-0.457965671634;DBP:-0.481321327783;TBP:-0.530187174518;TFCP2:-0.530965370875;PATZ1:-0.557530175257;AHR_ARNT_ARNT2:-0.603437202682;HOX{A5,B5}:-0.609562666332;TBX4,5:-0.625409537064;HBP1_HMGB_SSRP1_UBTF:-0.639465213463;REST:-0.642567380713;NKX2-2,8:-0.646777641047;FOXP1:-0.653315785837;STAT5{A,B}:-0.655139530251;ZNF143:-0.657573198497;HES1:-0.663116060264;RFX1:-0.673211817581;VSX1,2:-0.705254474969;POU1F1:-0.711329999988;NKX6-1,2:-0.714659091099;MAZ:-0.716709083594;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.724380459489;PBX1:-0.734770401823;SP1:-0.741193051276;MZF1:-0.74128095809;NKX3-2:-0.759681736651;MTF1:-0.777931847458;GFI1:-0.789025943566;GATA4:-0.794667488993;PRDM1:-0.798477482984;SRF:-0.804705712191;NR1H4:-0.808586319719;ZBTB6:-0.808718908062;ZNF384:-0.811514515655;PAX5:-0.818047884676;ZBTB16:-0.836525055484;IKZF2:-0.84313699197;NR3C1:-0.861436331216;MTE{core}:-0.866996314319;MYBL2:-0.893153791333;LHX3,4:-0.924942146052;ARID5B:-0.934352847496;PAX4:-0.934801662065;CDC5L:-0.944251834139;GZF1:-0.955505290659;NFE2L1:-0.969789529855;HIC1:-1.00085939536;HOX{A6,A7,B6,B7}:-1.06387113691;RREB1:-1.07515704742;GCM1,2:-1.08051372841;ZNF423:-1.08153058434;NKX3-1:-1.11105077371;POU3F1..4:-1.1130874804;TFAP2B:-1.13102627795;TP53:-1.13474415577;NKX2-1,4:-1.14558514102;TEF:-1.18220539675;SPZ1:-1.18387796567;EBF1:-1.18760220066;ONECUT1,2:-1.24987561167;GTF2A1,2:-1.29449594315;GFI1B:-1.30285013767;TOPORS:-1.3237332907;TEAD1:-1.4117063875;KLF4:-1.43133172115;TFDP1:-1.43747412533;PITX1..3:-1.46581875312;UFEwm:-1.52649933286;GTF2I:-1.5364649015;POU6F1:-1.61849095592;XCPE1{core}:-1.63595354777;ADNP_IRX_SIX_ZHX:-1.68818920316;ZIC1..3:-1.7123721947;TLX1..3_NFIC{dimer}:-1.84669301299;PAX1,9:-2.00029733085;IKZF1:-2.00469841194;FOXM1:-2.18225328396
|top_motifs=NANOG{mouse}:2.57587969066;NFKB1_REL_RELA:1.80664730403;LMO2:1.80468629243;SPI1:1.74136810079;CREB1:1.73484776298;ELF1,2,4:1.73012571436;ATF5_CREB3:1.66910898312;NFIL3:1.63299882414;DMAP1_NCOR{1,2}_SMARC:1.63008577529;FOXQ1:1.58674053278;RUNX1..3:1.53619101086;SPIB:1.50924486445;AIRE:1.44398208289;PAX2:1.4175371547;PAX6:1.37431025638;NANOG:1.34345924212;FOX{F1,F2,J1}:1.34075608552;TGIF1:1.33703132749;ETS1,2:1.32655481832;IRF1,2:1.32381366571;FOXN1:1.22424736379;EN1,2:1.20677420461;RFX2..5_RFXANK_RFXAP:1.16044206448;MYOD1:1.15434859607;IRF7:1.12234352474;ALX1:1.0540994213;HMX1:1.04252289522;ATF4:0.988497402191;CRX:0.962942958651;PDX1:0.87767105017;HIF1A:0.872759574495;ELK1,4_GABP{A,B1}:0.810938084646;TLX2:0.801607310574;BPTF:0.799152385521;MYFfamily:0.784914747443;POU2F1..3:0.719394397252;ATF6:0.717946437042;FOXA2:0.711269946699;FOXP3:0.684268037795;RBPJ:0.643598273265;NHLH1,2:0.643368346754;MYB:0.642098754189;FOXO1,3,4:0.605067310903;XBP1:0.546234885021;SREBF1,2:0.545907059201;SMAD1..7,9:0.50046833422;PAX3,7:0.491297952797;ZEB1:0.484055036895;RORA:0.483344272728;ZNF148:0.459925724116;BREu{core}:0.443622758976;MEF2{A,B,C,D}:0.435640359891;FOXD3:0.432364445295;POU5F1:0.429531266304;MAFB:0.42141436283;HMGA1,2:0.375823959498;ATF2:0.359468763807;TFAP4:0.352177806363;TAL1_TCF{3,4,12}:0.318401034766;OCT4_SOX2{dimer}:0.263524030373;ESRRA:0.260193807712;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.250479116397;NR5A1,2:0.243539409781;RXRA_VDR{dimer}:0.241318914265;SOX{8,9,10}:0.221605734044;BACH2:0.212700764726;GATA6:0.208415168635;NR6A1:0.177563423878;FOX{D1,D2}:0.175711235569;PPARG:0.170287272838;CEBPA,B_DDIT3:0.149197836702;FOSL2:0.147473193163;JUN:0.1385009443;SOX2:0.0782895646897;EP300:0.0765888553477;ESR1:0.0655450151651;SNAI1..3:0.0642063207558;GLI1..3:0.0618388018751;YY1:0.0558930051493;NFE2:0.027956871988;FOS_FOS{B,L1}_JUN{B,D}:0.0228447205493;LEF1_TCF7_TCF7L1,2:0.000902414675553;HOXA9_MEIS1:-0.0154409232922;HAND1,2:-0.0237906117396;HNF4A_NR2F1,2:-0.0489685035015;TFAP2{A,C}:-0.0517154485841;CUX2:-0.0520474159531;FOX{I1,J2}:-0.064564856406;HLF:-0.0762343090345;NFIX:-0.0971359310712;EVI1:-0.136100609757;NFATC1..3:-0.16303551784;HSF1,2:-0.182861286171;SOX17:-0.185882614717;bHLH_family:-0.201611907246;ZNF238:-0.224153912963;NFY{A,B,C}:-0.226620851394;STAT1,3:-0.229015872815;HNF1A:-0.260779042854;CDX1,2,4:-0.264314760329;FOXL1:-0.269264338091;T:-0.284716805734;EGR1..3:-0.312416318547;MED-1{core}:-0.352376314094;ZFP161:-0.366417617502;NKX2-3_NKX2-5:-0.366639125744;PAX8:-0.373108845474;AR:-0.380447352505;NRF1:-0.397411287005;RXR{A,B,G}:-0.423296830798;STAT2,4,6:-0.430884879325;E2F1..5:-0.431314375826;PRRX1,2:-0.437425171453;HOX{A4,D4}:-0.437979178555;NFE2L2:-0.439675241683;SOX5:-0.457018640118;ALX4:-0.457965671634;DBP:-0.481321327783;TBP:-0.530187174518;TFCP2:-0.530965370875;PATZ1:-0.557530175257;AHR_ARNT_ARNT2:-0.603437202682;HOX{A5,B5}:-0.609562666332;TBX4,5:-0.625409537064;HBP1_HMGB_SSRP1_UBTF:-0.639465213463;REST:-0.642567380713;NKX2-2,8:-0.646777641047;FOXP1:-0.653315785837;STAT5{A,B}:-0.655139530251;ZNF143:-0.657573198497;HES1:-0.663116060264;RFX1:-0.673211817581;VSX1,2:-0.705254474969;POU1F1:-0.711329999988;NKX6-1,2:-0.714659091099;MAZ:-0.716709083594;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.724380459489;PBX1:-0.734770401823;SP1:-0.741193051276;MZF1:-0.74128095809;NKX3-2:-0.759681736651;MTF1:-0.777931847458;GFI1:-0.789025943566;GATA4:-0.794667488993;PRDM1:-0.798477482984;SRF:-0.804705712191;NR1H4:-0.808586319719;ZBTB6:-0.808718908062;ZNF384:-0.811514515655;PAX5:-0.818047884676;ZBTB16:-0.836525055484;IKZF2:-0.84313699197;NR3C1:-0.861436331216;MTE{core}:-0.866996314319;MYBL2:-0.893153791333;LHX3,4:-0.924942146052;ARID5B:-0.934352847496;PAX4:-0.934801662065;CDC5L:-0.944251834139;GZF1:-0.955505290659;NFE2L1:-0.969789529855;HIC1:-1.00085939536;HOX{A6,A7,B6,B7}:-1.06387113691;RREB1:-1.07515704742;GCM1,2:-1.08051372841;ZNF423:-1.08153058434;NKX3-1:-1.11105077371;POU3F1..4:-1.1130874804;TFAP2B:-1.13102627795;TP53:-1.13474415577;NKX2-1,4:-1.14558514102;TEF:-1.18220539675;SPZ1:-1.18387796567;EBF1:-1.18760220066;ONECUT1,2:-1.24987561167;GTF2A1,2:-1.29449594315;GFI1B:-1.30285013767;TOPORS:-1.3237332907;TEAD1:-1.4117063875;KLF4:-1.43133172115;TFDP1:-1.43747412533;PITX1..3:-1.46581875312;UFEwm:-1.52649933286;GTF2I:-1.5364649015;POU6F1:-1.61849095592;XCPE1{core}:-1.63595354777;ADNP_IRX_SIX_ZHX:-1.68818920316;ZIC1..3:-1.7123721947;TLX1..3_NFIC{dimer}:-1.84669301299;PAX1,9:-2.00029733085;IKZF1:-2.00469841194;FOXM1:-2.18225328396
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11309-117C4;search_select_hide=table117:FF:11309-117C4
}}
}}

Latest revision as of 16:32, 3 June 2020

Name:Dendritic Cells - plasmacytoid, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12196
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage25 years old adult
sexmale
age25
cell typedendritic cell, plasmacytoid
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberPDC738
catalog number3H100-72-5
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004698
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12196 CAGE DRX008073 DRR008945
Accession ID Hg19

Library idBAMCTSS
CNhs12196 DRZ000370 DRZ001755
Accession ID Hg38

Library idBAMCTSS
CNhs12196 DRZ011720 DRZ013105
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.203
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.256
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.331
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.154
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.402
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.397
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.661
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.434
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.23
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.196
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.406
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.00872
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.505
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.196
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.157
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.196
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.434
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.153
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.196
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.196
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.623
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.341
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.196
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.331
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0186
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.196
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature1.151
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.434
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.196
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12196

Jaspar motifP-value
MA0002.22.54078e-8
MA0003.10.368
MA0004.10.346
MA0006.10.539
MA0007.10.733
MA0009.10.131
MA0014.10.819
MA0017.10.572
MA0018.20.00174
MA0019.10.489
MA0024.10.216
MA0025.10.00678
MA0027.10.345
MA0028.10.0257
MA0029.10.53
MA0030.10.146
MA0031.10.0895
MA0035.20.806
MA0038.10.525
MA0039.20.544
MA0040.10.0743
MA0041.10.401
MA0042.10.158
MA0043.10.00256
MA0046.10.713
MA0047.20.416
MA0048.12.469e-4
MA0050.18.53609e-9
MA0051.14.02508e-5
MA0052.10.0124
MA0055.12.38659e-5
MA0057.10.286
MA0058.10.132
MA0059.10.477
MA0060.10.352
MA0061.17.585e-13
MA0062.21.67708e-12
MA0065.20.0555
MA0066.10.198
MA0067.10.0017
MA0068.10.415
MA0069.10.52
MA0070.10.397
MA0071.10.863
MA0072.10.521
MA0073.10.284
MA0074.10.892
MA0076.10.00106
MA0077.10.314
MA0078.10.978
MA0079.20.449
MA0080.23.86085e-13
MA0081.16.94711e-6
MA0083.10.229
MA0084.10.192
MA0087.10.501
MA0088.10.825
MA0090.12.0366e-4
MA0091.10.0121
MA0092.10.891
MA0093.10.349
MA0099.27.96107e-5
MA0100.10.489
MA0101.13.86269e-13
MA0102.20.0177
MA0103.10.0303
MA0104.20.0689
MA0105.14.38539e-10
MA0106.10.0898
MA0107.11.53274e-13
MA0108.20.0212
MA0111.10.553
MA0112.20.0904
MA0113.10.852
MA0114.10.74
MA0115.10.262
MA0116.10.00179
MA0117.10.0596
MA0119.10.641
MA0122.10.218
MA0124.10.665
MA0125.10.431
MA0131.10.613
MA0135.10.592
MA0136.15.75089e-15
MA0137.20.991
MA0138.20.955
MA0139.10.993
MA0140.10.622
MA0141.10.896
MA0142.10.877
MA0143.10.861
MA0144.10.711
MA0145.10.418
MA0146.10.158
MA0147.10.139
MA0148.10.605
MA0149.10.93
MA0150.10.00165
MA0152.10.116
MA0153.10.0489
MA0154.10.00248
MA0155.10.755
MA0156.15.89353e-12
MA0157.10.209
MA0159.10.299
MA0160.10.577
MA0162.10.73
MA0163.14.94958e-6
MA0164.10.823
MA0258.10.167
MA0259.10.462



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12196

Novel motifP-value
10.625
100.0455
1000.561
1010.666
1020.59
1030.0512
1040.646
1050.411
1060.0432
1070.347
1080.147
1090.155
110.27
1100.692
1110.736
1120.906
1130.687
1140.499
1150.493
1160.345
1170.00532
1180.58
1190.302
120.426
1200.439
1210.552
1220.239
1230.827
1240.0909
1250.347
1260.129
1270.405
1280.374
1290.369
130.0945
1300.619
1310.648
1320.0123
1330.0959
1340.512
1350.417
1360.686
1370.00167
1380.915
1390.141
140.266
1400.624
1410.582
1420.288
1430.00145
1440.867
1450.52
1460.591
1470.122
1480.0814
1490.361
150.0833
1500.579
1510.314
1520.749
1530.386
1540.992
1550.141
1560.659
1570.734
1580.378
1590.191
160.559
1600.475
1610.208
1620.215
1630.986
1640.563
1650.409
1660.472
1670.547
1680.828
1690.958
170.966
180.528
190.389
20.832
200.5
210.939
220.56
230.596
240.388
250.11
260.932
270.0991
280.363
290.0179
30.19
300.464
310.587
320.0782
330.258
340.918
350.0725
360.143
370.0764
380.513
390.541
40.227
400.587
410.051
420.115
430.199
440.821
450.813
460.382
470.481
480.715
490.278
50.43
500.697
510.266
520.757
530.603
540.824
550.449
560.707
570.938
580.0361
590.457
60.955
600.193
610.146
620.022
630.913
640.553
650.647
660.68
670.142
680.445
690.581
70.127
700.309
710.0691
720.219
730.258
740.459
750.123
760.577
770.699
780.0676
790.817
80.605
800.0462
810.433
820.239
830.297
840.269
850.392
860.0257
870.0575
880.286
890.709
90.414
900.104
910.899
920.633
930.821
940.138
950.014
960.806
970.931
980.112
994.0805e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12196


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000784 (plasmacytoid dendritic cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000045 (human plasmacytoid dendritic cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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