FF:11356-117H6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004847 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004847 | ||
|accession_numbers=CAGE;DRX008414;DRR009286;DRZ000711;DRZ002096;DRZ012061;DRZ013446 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037145;DRR041511;DRZ007153 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002199,UBERON:0002384,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003102,UBERON:0010317,UBERON:0002072,UBERON:0002416 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002583 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000137,FF:0000142 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520subcutaneous%252c%2520donor2.CNhs11981.11356-117H6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11356-117H6 | |id=FF:11356-117H6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000142 | ||
|is_obsolete= | |||
|library_id=CNhs11981 | |||
|library_id_phase_based=2:CNhs11981 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11356 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.CGTACG.11356 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11356 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.CGTACG.11356 | |||
|name=Preadipocyte - subcutaneous, donor2 | |name=Preadipocyte - subcutaneous, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11981,LSID836,release011,COMPLETED | |profile_hcage=CNhs11981,LSID836,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10009,,, | |profile_srnaseq=SRhi10009,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0048161741511967,0,-0.27483329820609,0.067491550908519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131165963064359,0,0,0,0,0,0.307234211258868,0,0,0.0757101261527287,0,0,0,0,0,0,0,0,0,0,0,0,0.0645028011632008,0.0367285024240045,0,0,0,0,0,0,0,0.0069273376247106,0,0,0,0.116746970692643,0,0,0,0.333776918660351,0,0,-0.0350589097380071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0622847174750899,0,0,0,0,0,0,0,0,0,0,-0.00193953035257288,0,0,0,-0.0738874211951885,-0.00860134893240585,0,0.349020479352518,0.0583734853463215,0.0622847174750899,-0.0357506337626165,0.172113287794774,0,0,0,0,0,0,0.0622847174750899,0,0,0,0,0,0,0,0,0,0,0.0173358669338754,0.0622847174750899,0,0,-0.066028034726785,-0.0612978256840664,0,0,0.0622847174750899,0,0,0 | |||
|repeat_enrich_byname=0,0.0622847174750899,0,0,-0.0357506337626165,0.0622847174750899,0.0622847174750899,0,0,0,0,0,0,0.349020479352518,0,0,0.070773336358852,0,0.168636749855317,-0.0267681718308289,0.031142358737545,0,0.223171072652015,0,0.116746970692643,0,0,0,0,0,0,0,0.349685010826314,0,0.066334419103328,0,0,0,0,0.10672552490714,-0.140338026660825,0,0.139343092222501,0.0484027096152747,0,0,0,0,0.113994802389555,0,-0.0585947663186508,0.125946547608174,-0.221611588102807,0.354195957834662,-0.04680465889238,0,0,0,-0.0250415379732285,0.0754459650207016,0,0,0.105681914579231,0.0684207753241025,0,0,0.738999084238757,0,-0.0953726994676686,0.17022830372945,0,0.245025328764692,0,0,0,0,0,0,0,0,0,0,0,0.0320223772624298,-0.326988596678969,0.108782571315859,0,0,0,-0.147568295243102,0.0622847174750899,0,0.388679287723601,0.108381839118406,-0.0608716403793843,0.0158471411109736,0,-0.302389727009913,-0.111628274911121,-0.401669178293038,0.0770804591924675,0.137087124041648,0.127970492094569,0,0.104373397416938,-0.114079361500654,-0.0222495629873677,-0.00193953035257288,0.0112385864794684,0.217929568888357,-0.217216937453465,0,0,0.0622847174750899,0.00825572950188924,0,0,-0.0593454345738179,-0.086863886947922,0.0549308510113752,-0.207420636612874,0.0235017988081016,0.187162340897249,0.147367931627917,-0.0266671729936391,0.0527934275409791,0.548995987190755,0,0,-0.0206407973043505,0.00486106724261076,-0.174805757311073,-0.0955856765996899,0,-0.235747014942212,-0.0683442610773682,0,0.0615125740582325,0.0795731595620792,0,0.0622847174750899,-0.0792364431018884,0,0,0.223042285422742,0,0,0.0567021057647616,-0.539492143030166,0.0153748853132243,0,-0.129838517304255,-0.0363826138074996,0.0627103004518158,0,-0.266938625628927,0.0369912995115933,-0.120073566177221,-0.238211718614206,0,0.0762662684770097,0.0653035747320545,-0.0324371751317303,-0.0172026978648117,-0.0584468268118252,-0.103269627031709,0.076159608857566,-0.0738874211951885,0.299455221852116,0,1.19510073790669,0,0.0245994502093764,-0.179957343852001,0,0.0190429503038875,0.116746970692643,-0.006378915253203,0,-0.255406588087465,0,-0.053518210841886,0.197718775438297,-0.230622658649095,0.216262336479406,0,-0.0282456861021474,-0.0751731535300725,0,0,0,0,0.254825024192286,-0.120689918743383,-0.211650427864589,0.13105534094779,0,0.0159192257604016,0,0,0.0552939600951,0.0824761738800277,0,-0.0109538707583918,0.128949612698141,0.0819948710092436,0.168517899977853,0.0622847174750899,0,-0.214931058089769,0,0,-0.489181093125387,0,-0.12024253618911,0.520073175252563,0.0264850440360221,-0.108622809454255,0,0,-0.0123935617275929,0,0.248496807008495,0,0,0.26501838541607,0.201324098654284,0,0,0.284488973412787,0,0,0,0,0,0,0,0,-0.384307859567948,0.2040629294998,0,0.0689323476768031,0,0,0,0.0622847174750899,0,0,0,0.116746970692643,0.317166571565277,0,0.0421167885611625,0,0,0,0,0.133297076799043,-0.140951844619634,0,-0.0695779890225418,0,0,0,0,-0.0238562723141215,0,0,0,0.031142358737545,0.00455426042142588,-0.0884533044911968,0,0,0,0.281941858114458,0.0622847174750899,0,0,0.0421566660173724,-0.157664565315829,0,0.0622847174750899,0.252526948194046,0,-0.0419160870054889,-0.0815818795468414,0,0.0775652500989684,0.177177861847815,-0.0194707509828804,0,0,-0.261347131789888,0,0.172298610249221,0.0469522265370976,0,0.0622847174750899,0.010217582791428,0,0,0,0,0,0.116746970692643,-0.214314512399756,0.162706843312117,0,0.035961572698505,0,0,0,0,0,0,0,0.0622847174750899,-0.00750527000161871,0.156006390210259,0.207159147476987,0,0,0,0,0,0,0.0654098210049634,-0.126184135684267,0,0,0.0267105114071167,0,0,0,0,0,0.290539504016926,0,0,0.186900460084587,0,0,0.333776918660351,0,0.0622847174750899,0,0,0.134983101817038,0,0,-0.160615161500871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124911360833321,-0.297661274901585,0,0,0,0,0,0,0,-0.27483329820609,0,0,0,0,-0.0515996562338873,0,0,0,0.143434062079613,0,0.0048161741511967,0,0,0,0.031142358737545,0,0,0.0583734853463215,0,0,0,0,0,0,0,0,0,0,0.104333357965796,0,0,0,0.418336165113292,0.0335979065660992,0,0.00542577131249072,0,0,0.103468281173638,0,0,0,0,0,0,-0.000198065290982121,0.0487507299686556,0,0,0,0,0,0,0.031142358737545,0,0,0,0,0,0,0,0,0,0,0.0622847174750899,0,0,0,0,0,0.0583734853463215,-0.0247396500585748,0,0,0,0,0.520240496578989,0,0,0.307234211258868,0,0,-0.0920328098005262,0,0,0,0,0.227355778393208,0,0.0317411572605639,0.275675859893101,0.00284628826817113,0,0,0,0.234117451402144,0.116746970692643,0,0,0,-0.00449266994381146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131165963064359,0,0,0,0,0,0,0,0,0,0,0,0,0.031142358737545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116746970692643,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0367285024240045,0,0,0,-0.150801512181954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116746970692643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0622847174750899,0,0,0,-0.196762151018804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236266898173733,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165134204237583,0.0438867598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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=CA802s-R10a | |rna_catalog_number=CA802s-R10a | ||
| Line 56: | Line 82: | ||
|rna_tube_id=117H6 | |rna_tube_id=117H6 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10009.CGTACG | |||
|sample_age=53 | |sample_age=53 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.0667829295057e-247!GO:0043226;organelle;7.41188574988564e-200!GO:0043229;intracellular organelle;1.35192143444031e-199!GO:0043231;intracellular membrane-bound organelle;2.1584912994086e-198!GO:0043227;membrane-bound organelle;5.25639083722685e-198!GO:0005737;cytoplasm;8.07864789415467e-183!GO:0044422;organelle part;5.82689189253047e-154!GO:0044446;intracellular organelle part;1.42372519175932e-152!GO:0044444;cytoplasmic part;6.63124163368099e-128!GO:0032991;macromolecular complex;1.03226170220362e-112!GO:0030529;ribonucleoprotein complex;4.39409078168914e-96!GO:0044237;cellular metabolic process;2.01880996560043e-89!GO:0044238;primary metabolic process;2.6834497789543e-89!GO:0043170;macromolecule metabolic process;7.01385343535892e-86!GO:0005634;nucleus;4.72295128449485e-85!GO:0044428;nuclear part;1.4640742874707e-81!GO:0043233;organelle lumen;3.1013477834997e-81!GO:0031974;membrane-enclosed lumen;3.1013477834997e-81!GO:0005515;protein binding;5.99311204195468e-81!GO:0003723;RNA binding;2.37125267907085e-73!GO:0005739;mitochondrion;8.59372229369181e-70!GO:0005840;ribosome;5.88873306280541e-57!GO:0043234;protein complex;1.64134752084451e-56!GO:0006396;RNA processing;1.14997955810976e-54!GO:0006412;translation;1.46827338808271e-53!GO:0016043;cellular component organization and biogenesis;1.20235723249227e-52!GO:0003735;structural constituent of ribosome;1.40029834107685e-49!GO:0019538;protein metabolic process;1.63149009260776e-49!GO:0031981;nuclear lumen;7.94314495702219e-49!GO:0043283;biopolymer metabolic process;2.72689940592889e-48!GO:0031090;organelle membrane;1.03820602701025e-46!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.52365749910446e-46!GO:0044429;mitochondrial part;6.75071325764661e-46!GO:0010467;gene expression;1.50890294402018e-44!GO:0044260;cellular macromolecule metabolic process;6.42715003995568e-44!GO:0044267;cellular protein metabolic process;1.63318159526043e-43!GO:0015031;protein transport;4.51897916490309e-42!GO:0033279;ribosomal subunit;7.24032496308455e-42!GO:0031967;organelle envelope;1.77401679691947e-41!GO:0031975;envelope;4.54321425936947e-41!GO:0033036;macromolecule localization;5.9058660046672e-41!GO:0009058;biosynthetic process;7.15474927964736e-41!GO:0009059;macromolecule biosynthetic process;8.56315558165059e-41!GO:0044249;cellular biosynthetic process;2.74656425926418e-40!GO:0043228;non-membrane-bound organelle;3.58351464015981e-40!GO:0043232;intracellular non-membrane-bound organelle;3.58351464015981e-40!GO:0005829;cytosol;1.49080249747373e-39!GO:0016071;mRNA metabolic process;3.49106483487335e-39!GO:0045184;establishment of protein localization;2.32987571443741e-38!GO:0008104;protein localization;1.53137461471854e-37!GO:0008380;RNA splicing;3.01308974737825e-37!GO:0006996;organelle organization and biogenesis;3.29750903649233e-37!GO:0046907;intracellular transport;4.56255387178012e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.15226805841053e-35!GO:0006397;mRNA processing;1.17553334060307e-34!GO:0006259;DNA metabolic process;1.71382806693646e-33!GO:0065003;macromolecular complex assembly;1.83756528384218e-33!GO:0022607;cellular component assembly;2.01152570440093e-30!GO:0006886;intracellular protein transport;8.03774063068391e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.33042330700967e-29!GO:0005740;mitochondrial envelope;3.49845740280452e-29!GO:0005654;nucleoplasm;1.97105296268905e-28!GO:0007049;cell cycle;1.0438990560638e-27!GO:0005681;spliceosome;2.80567413733362e-27!GO:0031966;mitochondrial membrane;2.99396876820113e-27!GO:0019866;organelle inner membrane;8.93786753017903e-27!GO:0003676;nucleic acid binding;5.2284331461561e-26!GO:0005743;mitochondrial inner membrane;5.06653241546551e-25!GO:0044451;nucleoplasm part;3.76851790325851e-23!GO:0044445;cytosolic part;1.22331051941727e-22!GO:0051649;establishment of cellular localization;1.71979419270828e-22!GO:0051641;cellular localization;1.98529953913998e-22!GO:0015934;large ribosomal subunit;1.99805103393054e-22!GO:0016462;pyrophosphatase activity;2.32100660360754e-22!GO:0000278;mitotic cell cycle;2.60105810421424e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.0118932844632e-22!GO:0005730;nucleolus;3.76022014498227e-22!GO:0006119;oxidative phosphorylation;3.93523191440367e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;5.04743001469335e-22!GO:0000166;nucleotide binding;5.56411110279523e-22!GO:0017111;nucleoside-triphosphatase activity;1.16091278011374e-21!GO:0022402;cell cycle process;1.70710381062788e-21!GO:0006457;protein folding;4.34110138522859e-21!GO:0044455;mitochondrial membrane part;7.34201403079114e-21!GO:0015935;small ribosomal subunit;1.80021311755071e-20!GO:0031980;mitochondrial lumen;8.11191947005846e-20!GO:0005759;mitochondrial matrix;8.11191947005846e-20!GO:0016070;RNA metabolic process;2.35686849729433e-19!GO:0005783;endoplasmic reticulum;4.01421250020554e-19!GO:0012505;endomembrane system;6.47230285102782e-19!GO:0005694;chromosome;1.01292261888986e-18!GO:0006974;response to DNA damage stimulus;2.12520639715438e-18!GO:0022618;protein-RNA complex assembly;2.76509288639207e-18!GO:0042254;ribosome biogenesis and assembly;4.77943168695606e-18!GO:0000502;proteasome complex (sensu Eukaryota);1.31932837404607e-17!GO:0000087;M phase of mitotic cell cycle;1.59594361148015e-17!GO:0007067;mitosis;2.8340791745114e-17!GO:0044427;chromosomal part;7.08903645295982e-17!GO:0005746;mitochondrial respiratory chain;8.89408781967884e-17!GO:0005761;mitochondrial ribosome;1.02286732302979e-16!GO:0000313;organellar ribosome;1.02286732302979e-16!GO:0022403;cell cycle phase;1.40011570098373e-16!GO:0043285;biopolymer catabolic process;1.46910752802201e-16!GO:0048770;pigment granule;1.57598653760436e-16!GO:0042470;melanosome;1.57598653760436e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.45887578599142e-16!GO:0008134;transcription factor binding;2.83814710582633e-16!GO:0044432;endoplasmic reticulum part;6.57684531621884e-16!GO:0008135;translation factor activity, nucleic acid binding;6.60215430047128e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.14701138217463e-15!GO:0006260;DNA replication;1.14701138217463e-15!GO:0044265;cellular macromolecule catabolic process;1.4081011525524e-15!GO:0016874;ligase activity;1.54089572571272e-15!GO:0006512;ubiquitin cycle;1.55893365695288e-15!GO:0006605;protein targeting;1.56934639181007e-15!GO:0019941;modification-dependent protein catabolic process;1.92557433661915e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.92557433661915e-15!GO:0006281;DNA repair;2.53716833931579e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.15792334710631e-15!GO:0044257;cellular protein catabolic process;3.36294033313603e-15!GO:0050136;NADH dehydrogenase (quinone) activity;3.36294033313603e-15!GO:0003954;NADH dehydrogenase activity;3.36294033313603e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.36294033313603e-15!GO:0051186;cofactor metabolic process;3.38764524601555e-15!GO:0051082;unfolded protein binding;3.76735810332351e-15!GO:0032553;ribonucleotide binding;3.97417936414903e-15!GO:0032555;purine ribonucleotide binding;3.97417936414903e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.23238481651433e-15!GO:0009057;macromolecule catabolic process;4.81126393672746e-15!GO:0051301;cell division;8.32070735650254e-15!GO:0017076;purine nucleotide binding;9.96065057183276e-15!GO:0030163;protein catabolic process;9.96065057183276e-15!GO:0048193;Golgi vesicle transport;1.52918658889917e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.75598102892773e-14!GO:0005794;Golgi apparatus;3.3329877853297e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;3.3451935427724e-14!GO:0000375;RNA splicing, via transesterification reactions;3.3451935427724e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.3451935427724e-14!GO:0000279;M phase;3.65579777802739e-14!GO:0051276;chromosome organization and biogenesis;6.54777728361389e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.65667647179023e-13!GO:0042773;ATP synthesis coupled electron transport;1.65667647179023e-13!GO:0009719;response to endogenous stimulus;2.47474800995166e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.70340385442877e-13!GO:0045271;respiratory chain complex I;2.70340385442877e-13!GO:0005747;mitochondrial respiratory chain complex I;2.70340385442877e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.92387829312658e-13!GO:0044248;cellular catabolic process;6.90955961737933e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.13038643982251e-13!GO:0005524;ATP binding;7.26509799587625e-13!GO:0005635;nuclear envelope;8.80882069079631e-13!GO:0032559;adenyl ribonucleotide binding;1.99441346636168e-12!GO:0003743;translation initiation factor activity;2.01807295097055e-12!GO:0006364;rRNA processing;2.45737968051142e-12!GO:0044453;nuclear membrane part;2.52802315148668e-12!GO:0005793;ER-Golgi intermediate compartment;3.37078202881008e-12!GO:0031965;nuclear membrane;4.19591788081147e-12!GO:0016072;rRNA metabolic process;6.34788786641401e-12!GO:0030554;adenyl nucleotide binding;6.9049734885806e-12!GO:0006413;translational initiation;1.18320781008776e-11!GO:0009259;ribonucleotide metabolic process;1.46694495533018e-11!GO:0016604;nuclear body;1.58417184151183e-11!GO:0006732;coenzyme metabolic process;1.66432403891576e-11!GO:0006399;tRNA metabolic process;2.00814728969715e-11!GO:0000074;regulation of progression through cell cycle;2.36003541233595e-11!GO:0051726;regulation of cell cycle;2.65535153680465e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;4.26065041212998e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.70968601347093e-11!GO:0006913;nucleocytoplasmic transport;5.7219406854461e-11!GO:0016887;ATPase activity;6.24712443519224e-11!GO:0006163;purine nucleotide metabolic process;6.34539184124859e-11!GO:0012501;programmed cell death;8.69463914286835e-11!GO:0043412;biopolymer modification;9.17784376460558e-11!GO:0065004;protein-DNA complex assembly;1.03901253030396e-10!GO:0006446;regulation of translational initiation;1.17576957513731e-10!GO:0003712;transcription cofactor activity;1.2025931725863e-10!GO:0016192;vesicle-mediated transport;1.26847698723856e-10!GO:0042623;ATPase activity, coupled;1.29743275853593e-10!GO:0009055;electron carrier activity;1.34883337494325e-10!GO:0051169;nuclear transport;1.39213479568654e-10!GO:0006323;DNA packaging;1.41004491601094e-10!GO:0006915;apoptosis;1.41004491601094e-10!GO:0005643;nuclear pore;2.0568921331357e-10!GO:0005789;endoplasmic reticulum membrane;2.07510117170296e-10!GO:0009150;purine ribonucleotide metabolic process;2.24590800964957e-10!GO:0009260;ribonucleotide biosynthetic process;2.8531778167797e-10!GO:0006164;purine nucleotide biosynthetic process;3.90318882309444e-10!GO:0048523;negative regulation of cellular process;8.88524133072422e-10!GO:0008219;cell death;9.96120873464113e-10!GO:0016265;death;9.96120873464113e-10!GO:0065002;intracellular protein transport across a membrane;1.13053660778655e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.42190335679757e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.88298432291093e-09!GO:0000785;chromatin;1.90669411364777e-09!GO:0004386;helicase activity;2.05276778847926e-09!GO:0006464;protein modification process;2.19421676297111e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.20667060990181e-09!GO:0006366;transcription from RNA polymerase II promoter;2.39972762586179e-09!GO:0006333;chromatin assembly or disassembly;2.59402520311234e-09!GO:0008639;small protein conjugating enzyme activity;2.70707151295743e-09!GO:0016607;nuclear speck;3.57683205270973e-09!GO:0009141;nucleoside triphosphate metabolic process;4.04336419726803e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.19276313663151e-09!GO:0046930;pore complex;6.51588958578977e-09!GO:0006888;ER to Golgi vesicle-mediated transport;6.88132520732161e-09!GO:0004842;ubiquitin-protein ligase activity;6.9481593873824e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.02252432162996e-09!GO:0009144;purine nucleoside triphosphate metabolic process;9.02252432162996e-09!GO:0006461;protein complex assembly;9.42186660195026e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.21213598003651e-08!GO:0006403;RNA localization;1.24106504261479e-08!GO:0008565;protein transporter activity;1.24106504261479e-08!GO:0019787;small conjugating protein ligase activity;1.26633736539143e-08!GO:0017038;protein import;1.26633736539143e-08!GO:0006334;nucleosome assembly;1.29150280537689e-08!GO:0005788;endoplasmic reticulum lumen;1.33862651708013e-08!GO:0050657;nucleic acid transport;1.42685097473034e-08!GO:0051236;establishment of RNA localization;1.42685097473034e-08!GO:0050658;RNA transport;1.42685097473034e-08!GO:0008026;ATP-dependent helicase activity;1.52045602726959e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.57240206908005e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.57240206908005e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.57240206908005e-08!GO:0015630;microtubule cytoskeleton;1.58575109114396e-08!GO:0003697;single-stranded DNA binding;1.58575109114396e-08!GO:0050794;regulation of cellular process;1.70914820367999e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.82222357929795e-08!GO:0016779;nucleotidyltransferase activity;2.45340116875541e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.67435712565692e-08!GO:0003924;GTPase activity;2.86444737505927e-08!GO:0043038;amino acid activation;2.98507978368347e-08!GO:0006418;tRNA aminoacylation for protein translation;2.98507978368347e-08!GO:0043039;tRNA aminoacylation;2.98507978368347e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.68546873762005e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.68546873762005e-08!GO:0048519;negative regulation of biological process;4.06909394533927e-08!GO:0043566;structure-specific DNA binding;4.33193587843631e-08!GO:0015986;ATP synthesis coupled proton transport;4.8257248347601e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.8257248347601e-08!GO:0043687;post-translational protein modification;5.03047285850807e-08!GO:0009117;nucleotide metabolic process;5.07471919058007e-08!GO:0009060;aerobic respiration;5.21305716858975e-08!GO:0007005;mitochondrion organization and biogenesis;5.94056046956249e-08!GO:0030120;vesicle coat;6.45145315893766e-08!GO:0030662;coated vesicle membrane;6.45145315893766e-08!GO:0031497;chromatin assembly;7.29677606771754e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.81443349328377e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.81443349328377e-08!GO:0046034;ATP metabolic process;8.55223220599726e-08!GO:0006261;DNA-dependent DNA replication;1.0838029345706e-07!GO:0051188;cofactor biosynthetic process;1.14597300027785e-07!GO:0009056;catabolic process;1.23595651645582e-07!GO:0016881;acid-amino acid ligase activity;1.45954755862469e-07!GO:0005667;transcription factor complex;1.49313165756652e-07!GO:0045333;cellular respiration;1.70459099350051e-07!GO:0019829;cation-transporting ATPase activity;1.86120103620119e-07!GO:0051246;regulation of protein metabolic process;1.91946958438652e-07!GO:0042981;regulation of apoptosis;1.96257102729057e-07!GO:0005819;spindle;2.2700441291084e-07!GO:0043067;regulation of programmed cell death;2.32283999787507e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.70895208547193e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.78400894789465e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.67710462875912e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.50990995636686e-07!GO:0051028;mRNA transport;6.51444219004448e-07!GO:0048475;coated membrane;6.79401656953659e-07!GO:0030117;membrane coat;6.79401656953659e-07!GO:0006099;tricarboxylic acid cycle;7.16637376249668e-07!GO:0046356;acetyl-CoA catabolic process;7.16637376249668e-07!GO:0006754;ATP biosynthetic process;7.35092248419338e-07!GO:0006753;nucleoside phosphate metabolic process;7.35092248419338e-07!GO:0043069;negative regulation of programmed cell death;8.12799265190339e-07!GO:0000775;chromosome, pericentric region;8.14215150817716e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.06710648511673e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.76923523368126e-07!GO:0051187;cofactor catabolic process;1.18505781510598e-06!GO:0043066;negative regulation of apoptosis;1.19531577823298e-06!GO:0006916;anti-apoptosis;1.39615307482811e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.61588838352098e-06!GO:0045259;proton-transporting ATP synthase complex;1.69369497291522e-06!GO:0031324;negative regulation of cellular metabolic process;1.72008721878968e-06!GO:0006084;acetyl-CoA metabolic process;1.75761014296654e-06!GO:0016787;hydrolase activity;1.76158409795142e-06!GO:0005762;mitochondrial large ribosomal subunit;1.82311822708027e-06!GO:0000315;organellar large ribosomal subunit;1.82311822708027e-06!GO:0016491;oxidoreductase activity;2.11235135758285e-06!GO:0005813;centrosome;2.26283733196019e-06!GO:0000245;spliceosome assembly;2.30990402466184e-06!GO:0004298;threonine endopeptidase activity;2.30990402466184e-06!GO:0009109;coenzyme catabolic process;2.45088976544876e-06!GO:0005768;endosome;2.65757707308734e-06!GO:0051329;interphase of mitotic cell cycle;2.69828482914634e-06!GO:0044431;Golgi apparatus part;3.7179296809237e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.88145784625932e-06!GO:0007051;spindle organization and biogenesis;3.92574805262668e-06!GO:0032446;protein modification by small protein conjugation;4.41268169325541e-06!GO:0005815;microtubule organizing center;4.42834027256417e-06!GO:0051170;nuclear import;5.12740176440724e-06!GO:0000151;ubiquitin ligase complex;5.52948268197043e-06!GO:0009108;coenzyme biosynthetic process;6.21859404029059e-06!GO:0043623;cellular protein complex assembly;6.43177184504317e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.80296267724203e-06!GO:0003714;transcription corepressor activity;7.15811341629244e-06!GO:0006613;cotranslational protein targeting to membrane;7.18697344307633e-06!GO:0016567;protein ubiquitination;7.56063184838263e-06!GO:0016853;isomerase activity;7.89430958796943e-06!GO:0003899;DNA-directed RNA polymerase activity;7.97495109645875e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.39078049094812e-06!GO:0016563;transcription activator activity;9.06019822062404e-06!GO:0006606;protein import into nucleus;1.00636760316847e-05!GO:0016740;transferase activity;1.02232398415089e-05!GO:0045454;cell redox homeostasis;1.1003477911105e-05!GO:0051325;interphase;1.17628112243722e-05!GO:0016859;cis-trans isomerase activity;1.22823777246142e-05!GO:0005657;replication fork;1.28129059705801e-05!GO:0000075;cell cycle checkpoint;1.3726011815745e-05!GO:0005525;GTP binding;1.95804718256346e-05!GO:0003724;RNA helicase activity;1.98776497372217e-05!GO:0016568;chromatin modification;1.98776497372217e-05!GO:0003713;transcription coactivator activity;2.09945482244699e-05!GO:0006752;group transfer coenzyme metabolic process;2.3008774012984e-05!GO:0031252;leading edge;2.57476430297829e-05!GO:0050789;regulation of biological process;2.57476430297829e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.0422825307459e-05!GO:0030867;rough endoplasmic reticulum membrane;3.13013007175046e-05!GO:0009892;negative regulation of metabolic process;3.44018433260363e-05!GO:0051427;hormone receptor binding;3.44018433260363e-05!GO:0016564;transcription repressor activity;3.46204942618468e-05!GO:0044440;endosomal part;3.80850344481745e-05!GO:0010008;endosome membrane;3.80850344481745e-05!GO:0008094;DNA-dependent ATPase activity;3.87820122322456e-05!GO:0000314;organellar small ribosomal subunit;4.18938972143566e-05!GO:0005763;mitochondrial small ribosomal subunit;4.18938972143566e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.36277363242673e-05!GO:0007010;cytoskeleton organization and biogenesis;4.88796719275925e-05!GO:0008361;regulation of cell size;4.9808536860963e-05!GO:0005798;Golgi-associated vesicle;5.14821087968741e-05!GO:0016049;cell growth;5.901453105624e-05!GO:0044452;nucleolar part;6.16005628772472e-05!GO:0043021;ribonucleoprotein binding;6.53782804579963e-05!GO:0035257;nuclear hormone receptor binding;7.73430639358042e-05!GO:0045786;negative regulation of progression through cell cycle;8.00343076554431e-05!GO:0000139;Golgi membrane;8.03788303207155e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;8.26442443336038e-05!GO:0001558;regulation of cell growth;8.61952737719817e-05!GO:0048522;positive regulation of cellular process;8.98891664796655e-05!GO:0009165;nucleotide biosynthetic process;9.58050975777213e-05!GO:0006793;phosphorus metabolic process;9.68183934310135e-05!GO:0006796;phosphate metabolic process;9.68183934310135e-05!GO:0005048;signal sequence binding;0.000112237786115566!GO:0005770;late endosome;0.000133504044284539!GO:0006612;protein targeting to membrane;0.00014272037988302!GO:0006626;protein targeting to mitochondrion;0.000145686743177135!GO:0051789;response to protein stimulus;0.00015024326571888!GO:0006986;response to unfolded protein;0.00015024326571888!GO:0030036;actin cytoskeleton organization and biogenesis;0.000152088954436738!GO:0032561;guanyl ribonucleotide binding;0.00015549916357411!GO:0019001;guanyl nucleotide binding;0.00015549916357411!GO:0000786;nucleosome;0.000160498453165489!GO:0008033;tRNA processing;0.00020884494054405!GO:0016310;phosphorylation;0.000210184714629802!GO:0008654;phospholipid biosynthetic process;0.000210184714629802!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000212398045654532!GO:0043681;protein import into mitochondrion;0.000224720082576335!GO:0005769;early endosome;0.000226743157314871!GO:0051168;nuclear export;0.000240900762359244!GO:0000776;kinetochore;0.000248363365777494!GO:0016363;nuclear matrix;0.000256486832820142!GO:0006950;response to stress;0.000269159336293156!GO:0006091;generation of precursor metabolites and energy;0.000271619083722183!GO:0033116;ER-Golgi intermediate compartment membrane;0.000272999842722782!GO:0019222;regulation of metabolic process;0.000278744955115004!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000281939657930368!GO:0016481;negative regulation of transcription;0.000295362166583763!GO:0005885;Arp2/3 protein complex;0.000296935353215137!GO:0019867;outer membrane;0.000307758241773636!GO:0031968;organelle outer membrane;0.000332800269017097!GO:0031072;heat shock protein binding;0.000369701328099367!GO:0016023;cytoplasmic membrane-bound vesicle;0.000392069421273449!GO:0006839;mitochondrial transport;0.000401376098507688!GO:0004527;exonuclease activity;0.000417566865664689!GO:0004576;oligosaccharyl transferase activity;0.000437432755998794!GO:0031988;membrane-bound vesicle;0.000445633322104798!GO:0015980;energy derivation by oxidation of organic compounds;0.000453004844353629!GO:0051052;regulation of DNA metabolic process;0.000464872884400093!GO:0008250;oligosaccharyl transferase complex;0.000469245216438269!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000562096591584763!GO:0008186;RNA-dependent ATPase activity;0.000567980020373584!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000592635798985441!GO:0006383;transcription from RNA polymerase III promoter;0.000599666585754081!GO:0003690;double-stranded DNA binding;0.000615482641357431!GO:0030663;COPI coated vesicle membrane;0.000616887659043676!GO:0030126;COPI vesicle coat;0.000616887659043676!GO:0030880;RNA polymerase complex;0.000627476384297637!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000677522646686815!GO:0019899;enzyme binding;0.000682483597274086!GO:0006302;double-strand break repair;0.000717578921758754!GO:0005905;coated pit;0.000719933812085642!GO:0051252;regulation of RNA metabolic process;0.000728136491864748!GO:0007088;regulation of mitosis;0.000739500757937861!GO:0000059;protein import into nucleus, docking;0.000744071709298347!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000744071709298347!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000747883333953744!GO:0003729;mRNA binding;0.00082647014381375!GO:0019843;rRNA binding;0.000919222397739087!GO:0016741;transferase activity, transferring one-carbon groups;0.000934160616614093!GO:0018196;peptidyl-asparagine modification;0.000944832957282217!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000944832957282217!GO:0006414;translational elongation;0.000951527918188123!GO:0008168;methyltransferase activity;0.000953907913246109!GO:0030133;transport vesicle;0.000966082026342972!GO:0005741;mitochondrial outer membrane;0.000973530414956381!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00106144936520653!GO:0046483;heterocycle metabolic process;0.00108803055944974!GO:0051920;peroxiredoxin activity;0.00120017366410831!GO:0007059;chromosome segregation;0.00132377233445219!GO:0000082;G1/S transition of mitotic cell cycle;0.00133697789771431!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00140088253568658!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00140453543830593!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00140453543830593!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00140453543830593!GO:0048500;signal recognition particle;0.00141487563755261!GO:0030029;actin filament-based process;0.00143602724269734!GO:0006275;regulation of DNA replication;0.00144055211304899!GO:0030137;COPI-coated vesicle;0.0014651227645904!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0014936356046987!GO:0000428;DNA-directed RNA polymerase complex;0.0014936356046987!GO:0004004;ATP-dependent RNA helicase activity;0.00149677008831925!GO:0003684;damaged DNA binding;0.00153148263855311!GO:0007006;mitochondrial membrane organization and biogenesis;0.00163750715027519!GO:0046474;glycerophospholipid biosynthetic process;0.0017142447840043!GO:0031982;vesicle;0.00175196344724794!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00177688175680925!GO:0031410;cytoplasmic vesicle;0.00183016589913909!GO:0008312;7S RNA binding;0.00187779890384916!GO:0003678;DNA helicase activity;0.00190466319461067!GO:0005684;U2-dependent spliceosome;0.00190664757531973!GO:0006891;intra-Golgi vesicle-mediated transport;0.00194655924394784!GO:0008047;enzyme activator activity;0.00198292290509763!GO:0005773;vacuole;0.00201321506736616!GO:0007052;mitotic spindle organization and biogenesis;0.00208556176899426!GO:0005791;rough endoplasmic reticulum;0.0021305679497894!GO:0032508;DNA duplex unwinding;0.00225771727949061!GO:0032392;DNA geometric change;0.00225771727949061!GO:0007243;protein kinase cascade;0.00237839934596281!GO:0008180;signalosome;0.00260061890499993!GO:0043284;biopolymer biosynthetic process;0.00260119063741954!GO:0042802;identical protein binding;0.00260193680947796!GO:0007093;mitotic cell cycle checkpoint;0.0026209565300638!GO:0005874;microtubule;0.0026508895805096!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00268460437955424!GO:0035258;steroid hormone receptor binding;0.00269644161544238!GO:0006402;mRNA catabolic process;0.00274382666622314!GO:0043488;regulation of mRNA stability;0.00276067752558172!GO:0043487;regulation of RNA stability;0.00276067752558172!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.002837387164517!GO:0030658;transport vesicle membrane;0.00289017733170046!GO:0008139;nuclear localization sequence binding;0.00291148783701654!GO:0003682;chromatin binding;0.00295497676040234!GO:0030134;ER to Golgi transport vesicle;0.00295497676040234!GO:0030127;COPII vesicle coat;0.00296360069170247!GO:0012507;ER to Golgi transport vesicle membrane;0.00296360069170247!GO:0009112;nucleobase metabolic process;0.003013202826608!GO:0008632;apoptotic program;0.00306947317925089!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00307936697396955!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00307936697396955!GO:0051087;chaperone binding;0.00320110829280028!GO:0016251;general RNA polymerase II transcription factor activity;0.0032012991836619!GO:0006268;DNA unwinding during replication;0.0034537078426314!GO:0006401;RNA catabolic process;0.00354138525664584!GO:0048471;perinuclear region of cytoplasm;0.00373969388190605!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00377126194161737!GO:0045047;protein targeting to ER;0.00377126194161737!GO:0008243;plasminogen activator activity;0.00381270095826915!GO:0006595;polyamine metabolic process;0.00381696126551173!GO:0009116;nucleoside metabolic process;0.00383572315714407!GO:0030176;integral to endoplasmic reticulum membrane;0.00385912446326637!GO:0030132;clathrin coat of coated pit;0.00385912446326637!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0040313191760048!GO:0006352;transcription initiation;0.00412524399594244!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00417214216433789!GO:0045941;positive regulation of transcription;0.00417856716701477!GO:0004518;nuclease activity;0.00425763211542375!GO:0046489;phosphoinositide biosynthetic process;0.00454221665922598!GO:0006310;DNA recombination;0.00477470922959967!GO:0017166;vinculin binding;0.00517453581603114!GO:0065007;biological regulation;0.00521833309627668!GO:0015631;tubulin binding;0.00537506514663603!GO:0000178;exosome (RNase complex);0.00560435946782924!GO:0048518;positive regulation of biological process;0.00581982485439938!GO:0007050;cell cycle arrest;0.00581982485439938!GO:0030521;androgen receptor signaling pathway;0.00584577004877467!GO:0065009;regulation of a molecular function;0.00586014189942346!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00600605152180915!GO:0000323;lytic vacuole;0.00600984059224736!GO:0005764;lysosome;0.00600984059224736!GO:0000049;tRNA binding;0.00616540643828767!GO:0005876;spindle microtubule;0.00676524440488005!GO:0003746;translation elongation factor activity;0.00732572060457798!GO:0040008;regulation of growth;0.00743087045303558!GO:0030027;lamellipodium;0.00747052783708693!GO:0000910;cytokinesis;0.00764480519454788!GO:0003711;transcription elongation regulator activity;0.00776642759910575!GO:0048144;fibroblast proliferation;0.00781100899464645!GO:0048145;regulation of fibroblast proliferation;0.00781100899464645!GO:0031124;mRNA 3'-end processing;0.00797506300557064!GO:0045893;positive regulation of transcription, DNA-dependent;0.00797506300557064!GO:0030660;Golgi-associated vesicle membrane;0.00803465999480421!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00805611843763316!GO:0015399;primary active transmembrane transporter activity;0.00805611843763316!GO:0016272;prefoldin complex;0.00829889745694688!GO:0006220;pyrimidine nucleotide metabolic process;0.00829889745694688!GO:0016126;sterol biosynthetic process;0.00829889745694688!GO:0006144;purine base metabolic process;0.00849502753841973!GO:0005096;GTPase activator activity;0.00863363810210577!GO:0042770;DNA damage response, signal transduction;0.0086825590581762!GO:0048146;positive regulation of fibroblast proliferation;0.00872495985376879!GO:0043022;ribosome binding;0.00872495985376879!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00899231319645835!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00903152032455278!GO:0015992;proton transport;0.00960724221550241!GO:0005869;dynactin complex;0.00960724221550241!GO:0005862;muscle thin filament tropomyosin;0.00961220295147075!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00971291793837816!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00979971494595012!GO:0000339;RNA cap binding;0.00984614616312963!GO:0006270;DNA replication initiation;0.00984614616312963!GO:0031323;regulation of cellular metabolic process;0.0099276491521119!GO:0000228;nuclear chromosome;0.0100135155615549!GO:0016044;membrane organization and biogenesis;0.0100135155615549!GO:0001726;ruffle;0.0102885939196607!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0102892154295137!GO:0032984;macromolecular complex disassembly;0.0103743069803983!GO:0005669;transcription factor TFIID complex;0.0104278072411442!GO:0048487;beta-tubulin binding;0.0104642690381287!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0105973739987048!GO:0015002;heme-copper terminal oxidase activity;0.0105973739987048!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0105973739987048!GO:0004129;cytochrome-c oxidase activity;0.0105973739987048!GO:0005832;chaperonin-containing T-complex;0.0107273356225544!GO:0006740;NADPH regeneration;0.0107628009755567!GO:0006098;pentose-phosphate shunt;0.0107628009755567!GO:0006818;hydrogen transport;0.0109265885604943!GO:0048468;cell development;0.0110994848007326!GO:0005758;mitochondrial intermembrane space;0.0111389748816184!GO:0007017;microtubule-based process;0.0112811059422286!GO:0005637;nuclear inner membrane;0.0112811059422286!GO:0006405;RNA export from nucleus;0.0113290461412096!GO:0043596;nuclear replication fork;0.0113951146915868!GO:0006611;protein export from nucleus;0.0115164379821971!GO:0051539;4 iron, 4 sulfur cluster binding;0.0115803541641087!GO:0009124;nucleoside monophosphate biosynthetic process;0.0116429325663301!GO:0009123;nucleoside monophosphate metabolic process;0.0116429325663301!GO:0051540;metal cluster binding;0.0117244610242333!GO:0051536;iron-sulfur cluster binding;0.0117244610242333!GO:0008092;cytoskeletal protein binding;0.0119597532238598!GO:0006778;porphyrin metabolic process;0.0124829938889431!GO:0033013;tetrapyrrole metabolic process;0.0124829938889431!GO:0006979;response to oxidative stress;0.012836915610719!GO:0004532;exoribonuclease activity;0.0130809119257695!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0130809119257695!GO:0006289;nucleotide-excision repair;0.0131617764912512!GO:0006509;membrane protein ectodomain proteolysis;0.0132543475036904!GO:0033619;membrane protein proteolysis;0.0132543475036904!GO:0030118;clathrin coat;0.0133280982665977!GO:0000922;spindle pole;0.0138709786607694!GO:0019206;nucleoside kinase activity;0.0149672488604983!GO:0008408;3'-5' exonuclease activity;0.0153595195567422!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0153595195567422!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0153595195567422!GO:0009303;rRNA transcription;0.01547374480573!GO:0016197;endosome transport;0.0157514427732093!GO:0050681;androgen receptor binding;0.0158853625246673!GO:0031570;DNA integrity checkpoint;0.0161003116484383!GO:0004003;ATP-dependent DNA helicase activity;0.0161098394189012!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0163736930372325!GO:0043241;protein complex disassembly;0.0163933292326263!GO:0009451;RNA modification;0.0165667466771078!GO:0003702;RNA polymerase II transcription factor activity;0.0169561591304471!GO:0045045;secretory pathway;0.0172145247223485!GO:0043624;cellular protein complex disassembly;0.0173436766766579!GO:0031901;early endosome membrane;0.0176750304879055!GO:0022408;negative regulation of cell-cell adhesion;0.0177964896812722!GO:0022890;inorganic cation transmembrane transporter activity;0.0179326980394017!GO:0006417;regulation of translation;0.0179745483293096!GO:0006350;transcription;0.0180467284007382!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0181828500452299!GO:0008283;cell proliferation;0.018327589215643!GO:0000792;heterochromatin;0.018346917839926!GO:0004177;aminopeptidase activity;0.0183697970301462!GO:0031543;peptidyl-proline dioxygenase activity;0.0187618832349995!GO:0006892;post-Golgi vesicle-mediated transport;0.0187897191849517!GO:0031625;ubiquitin protein ligase binding;0.0190831478869757!GO:0006378;mRNA polyadenylation;0.019125444997751!GO:0008022;protein C-terminus binding;0.019181105082641!GO:0031529;ruffle organization and biogenesis;0.0196014327217148!GO:0031970;organelle envelope lumen;0.0197696625896498!GO:0046467;membrane lipid biosynthetic process;0.0200526391813465!GO:0031123;RNA 3'-end processing;0.0200937644936874!GO:0019798;procollagen-proline dioxygenase activity;0.0203956916603012!GO:0007346;regulation of progression through mitotic cell cycle;0.0205342597881517!GO:0045892;negative regulation of transcription, DNA-dependent;0.0207500516765484!GO:0006984;ER-nuclear signaling pathway;0.0217478866136536!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0219925986253477!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0220761787218298!GO:0033673;negative regulation of kinase activity;0.0221541518048387!GO:0006469;negative regulation of protein kinase activity;0.0221541518048387!GO:0031371;ubiquitin conjugating enzyme complex;0.02226646732338!GO:0008538;proteasome activator activity;0.022288935196494!GO:0007021;tubulin folding;0.0229283078621293!GO:0015036;disulfide oxidoreductase activity;0.0229293386135478!GO:0022411;cellular component disassembly;0.0234970607351194!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0236051649840785!GO:0000096;sulfur amino acid metabolic process;0.0236051649840785!GO:0009161;ribonucleoside monophosphate metabolic process;0.023801387136277!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.023801387136277!GO:0006284;base-excision repair;0.0239950620461345!GO:0042168;heme metabolic process;0.0240282440667374!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0244808420083494!GO:0051128;regulation of cellular component organization and biogenesis;0.0254197141161527!GO:0030032;lamellipodium biogenesis;0.0258778942009234!GO:0016584;nucleosome positioning;0.0270487382637524!GO:0051348;negative regulation of transferase activity;0.0271088929284043!GO:0022415;viral reproductive process;0.027349130134676!GO:0030508;thiol-disulfide exchange intermediate activity;0.0274250516276912!GO:0006520;amino acid metabolic process;0.0279875894959187!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0282447002044358!GO:0030041;actin filament polymerization;0.0283015676579498!GO:0044262;cellular carbohydrate metabolic process;0.0284043531105954!GO:0047485;protein N-terminus binding;0.0284266081590802!GO:0030518;steroid hormone receptor signaling pathway;0.028579958093644!GO:0030125;clathrin vesicle coat;0.028579958093644!GO:0030665;clathrin coated vesicle membrane;0.028579958093644!GO:0006506;GPI anchor biosynthetic process;0.0289472993115484!GO:0031418;L-ascorbic acid binding;0.0289472993115484!GO:0004674;protein serine/threonine kinase activity;0.029261308408976!GO:0006497;protein amino acid lipidation;0.0292907688809353!GO:0006376;mRNA splice site selection;0.0292907688809353!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0292907688809353!GO:0030433;ER-associated protein catabolic process;0.0295275279423982!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0295275279423982!GO:0003756;protein disulfide isomerase activity;0.0295275279423982!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0295275279423982!GO:0045792;negative regulation of cell size;0.0301409230629358!GO:0008601;protein phosphatase type 2A regulator activity;0.0301983549584648!GO:0006779;porphyrin biosynthetic process;0.0301983549584648!GO:0033014;tetrapyrrole biosynthetic process;0.0301983549584648!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0301983549584648!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0302343263830953!GO:0045039;protein import into mitochondrial inner membrane;0.0302343263830953!GO:0007569;cell aging;0.0310504942609882!GO:0006695;cholesterol biosynthetic process;0.0310504942609882!GO:0045936;negative regulation of phosphate metabolic process;0.0314513650329661!GO:0008629;induction of apoptosis by intracellular signals;0.0315624055076948!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.031760151549184!GO:0030833;regulation of actin filament polymerization;0.0318386663369059!GO:0043065;positive regulation of apoptosis;0.0320020332243123!GO:0051101;regulation of DNA binding;0.032600922169537!GO:0046426;negative regulation of JAK-STAT cascade;0.0329264406397751!GO:0001953;negative regulation of cell-matrix adhesion;0.0330367881206569!GO:0008610;lipid biosynthetic process;0.0331123609760602!GO:0030659;cytoplasmic vesicle membrane;0.0332520154521134!GO:0000209;protein polyubiquitination;0.0333091865404424!GO:0016408;C-acyltransferase activity;0.0333091865404424!GO:0043601;nuclear replisome;0.0333091865404424!GO:0030894;replisome;0.0333091865404424!GO:0051287;NAD binding;0.0333093254104491!GO:0000819;sister chromatid segregation;0.03335642294558!GO:0004248;stromelysin 1 activity;0.0333971611470149!GO:0008637;apoptotic mitochondrial changes;0.0336443311775876!GO:0030308;negative regulation of cell growth;0.033663671747936!GO:0043189;H4/H2A histone acetyltransferase complex;0.033726765403082!GO:0006007;glucose catabolic process;0.0342614705767449!GO:0000152;nuclear ubiquitin ligase complex;0.0346433918977124!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0356249941330873!GO:0050662;coenzyme binding;0.0357131743430045!GO:0042393;histone binding;0.035943869613721!GO:0000070;mitotic sister chromatid segregation;0.0368979639917263!GO:0008154;actin polymerization and/or depolymerization;0.0371391319461871!GO:0000781;chromosome, telomeric region;0.0373826565959582!GO:0046966;thyroid hormone receptor binding;0.0378848121624289!GO:0030911;TPR domain binding;0.0385942028289642!GO:0009967;positive regulation of signal transduction;0.0390621863817364!GO:0000159;protein phosphatase type 2A complex;0.0393860506404535!GO:0005100;Rho GTPase activator activity;0.0393860506404535!GO:0006505;GPI anchor metabolic process;0.0398616211851806!GO:0043492;ATPase activity, coupled to movement of substances;0.0398616211851806!GO:0009119;ribonucleoside metabolic process;0.0399647681945279!GO:0001952;regulation of cell-matrix adhesion;0.0399647681945279!GO:0005784;translocon complex;0.0401224615020537!GO:0043068;positive regulation of programmed cell death;0.0402548370910809!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0403603753147695!GO:0005732;small nucleolar ribonucleoprotein complex;0.0405989659686585!GO:0046128;purine ribonucleoside metabolic process;0.0413872933461644!GO:0042278;purine nucleoside metabolic process;0.0413872933461644!GO:0000077;DNA damage checkpoint;0.0423979918790079!GO:0030119;AP-type membrane coat adaptor complex;0.0431706837551191!GO:0000725;recombinational repair;0.0431706837551191!GO:0000724;double-strand break repair via homologous recombination;0.0431706837551191!GO:0035267;NuA4 histone acetyltransferase complex;0.0434357828324975!GO:0000175;3'-5'-exoribonuclease activity;0.0440883854580002!GO:0005680;anaphase-promoting complex;0.0443329661595559!GO:0006596;polyamine biosynthetic process;0.0444252605814383!GO:0032200;telomere organization and biogenesis;0.0451518279411009!GO:0000723;telomere maintenance;0.0451518279411009!GO:0008234;cysteine-type peptidase activity;0.0452650119823799!GO:0007040;lysosome organization and biogenesis;0.0452650119823799!GO:0005801;cis-Golgi network;0.0454191624930141!GO:0006541;glutamine metabolic process;0.0456332175858317!GO:0006360;transcription from RNA polymerase I promoter;0.0456954729129783!GO:0031326;regulation of cellular biosynthetic process;0.0456954729129783!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0460885079466594!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0461271274120874!GO:0006354;RNA elongation;0.0462377237982596!GO:0008287;protein serine/threonine phosphatase complex;0.0464255515585104!GO:0051271;negative regulation of cell motility;0.0465273659065637!GO:0030496;midbody;0.0468272002390357!GO:0043414;biopolymer methylation;0.0468517759294289!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.048150080812157!GO:0005663;DNA replication factor C complex;0.0490704286989783 | |||
|sample_id=11356 | |sample_id=11356 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=adipose tissue | |sample_tissue=adipose tissue | ||
|top_motifs=UFEwm:1.81529635012;ALX4:1.77921625269;EN1,2:1.69501260246;NKX2-2,8:1.65601877751;KLF4:1.41957534417;HES1:1.32669609952;PAX1,9:1.24219609724;GATA4:1.22579190992;GZF1:1.21037619093;ZNF238:1.20951029739;PAX8:1.15871656151;HOX{A5,B5}:1.09982446122;TAL1_TCF{3,4,12}:1.03884348724;ZNF384:1.02138985132;TFDP1:1.02077369158;HSF1,2:0.99281671246;HOX{A6,A7,B6,B7}:0.96907719945;NR3C1:0.841127177995;CDC5L:0.838720959811;FOXL1:0.798167094326;RXR{A,B,G}:0.780946985585;NANOG{mouse}:0.772350853434;ESR1:0.763303343629;E2F1..5:0.76100457118;HOX{A4,D4}:0.740893822007;TEF:0.732289251306;NFIX:0.714330437215;NKX3-1:0.665527959885;YY1:0.653379427191;TOPORS:0.648384252198;GLI1..3:0.64660541429;PRDM1:0.620849474475;MYB:0.62033888563;GFI1B:0.618736350519;HAND1,2:0.6110727291;MYBL2:0.60096031433;SRF:0.585531397708;ZIC1..3:0.581320726856;IKZF1:0.560473323729;EVI1:0.538506985774;ARID5B:0.508524619385;ATF6:0.498994499644;RXRA_VDR{dimer}:0.495698711061;TLX1..3_NFIC{dimer}:0.494086903317;ZBTB6:0.493249238206;MZF1:0.457665510768;TEAD1:0.454289958143;NFE2L1:0.454175281927;TFCP2:0.441006903459;NKX3-2:0.435807668583;NKX6-1,2:0.431177700111;GFI1:0.428815068936;TP53:0.423668660942;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.420878956562;GCM1,2:0.408718422431;NFATC1..3:0.406039617355;NFE2L2:0.394527963352;SPZ1:0.354588017163;NR1H4:0.315717038633;FOXD3:0.272002326034;EBF1:0.25220566774;SOX17:0.243526430315;BACH2:0.231408421786;FOX{I1,J2}:0.227942668018;GTF2I:0.214606595446;ELK1,4_GABP{A,B1}:0.214155373777;ZNF143:0.213972240957;IRF1,2:0.204800925973;TFAP4:0.172789121632;POU3F1..4:0.170677191138;FOS_FOS{B,L1}_JUN{B,D}:0.154065572416;POU2F1..3:0.14883628714;XBP1:0.128731531194;XCPE1{core}:0.113259747506;TBP:0.0811643628696;FOXQ1:0.0803024411703;GTF2A1,2:0.0569663036219;ZNF423:0.0555692741045;MAFB:0.0347747666151;PAX3,7:0.0152190697441;LHX3,4:0.013214708323;AIRE:-0.000317228314667;TBX4,5:-0.00224980752055;ALX1:-0.0193232777277;PAX4:-0.0304321427708;bHLH_family:-0.0316966741146;NRF1:-0.0439297885371;HNF1A:-0.0439960059622;FOXM1:-0.0457527441305;HLF:-0.0558863987672;ESRRA:-0.0669289200105;TFAP2{A,C}:-0.0716380332562;HBP1_HMGB_SSRP1_UBTF:-0.0757062707286;PPARG:-0.0853032626161;PBX1:-0.101573180382;HIC1:-0.130594317625;AR:-0.136808678385;NR6A1:-0.155087994468;HIF1A:-0.163591326965;HMGA1,2:-0.165164553817;PATZ1:-0.166817392804;TFAP2B:-0.170242901025;RUNX1..3:-0.177134391583;MTE{core}:-0.190462042067;NFKB1_REL_RELA:-0.214663808066;DBP:-0.216946223117;T:-0.218249865395;EGR1..3:-0.230279302252;ONECUT1,2:-0.233447109224;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.234996960178;NR5A1,2:-0.237279305877;NFY{A,B,C}:-0.251734742838;ZNF148:-0.254436597827;POU6F1:-0.254829033938;FOSL2:-0.257755109092;STAT5{A,B}:-0.261162107771;STAT2,4,6:-0.269446223439;DMAP1_NCOR{1,2}_SMARC:-0.273940154029;OCT4_SOX2{dimer}:-0.279987497229;MYFfamily:-0.300807139419;ELF1,2,4:-0.302784808852;CREB1:-0.30708605698;AHR_ARNT_ARNT2:-0.307146671921;MTF1:-0.307774711499;SOX{8,9,10}:-0.30802580079;NFIL3:-0.308985556717;SPI1:-0.315040882577;SMAD1..7,9:-0.316201542729;REST:-0.323811571632;RREB1:-0.327362750347;IRF7:-0.329364526749;HNF4A_NR2F1,2:-0.332719817633;NKX2-1,4:-0.339935937605;HMX1:-0.355687144582;ZBTB16:-0.36735097261;PRRX1,2:-0.370408767952;LEF1_TCF7_TCF7L1,2:-0.378827890533;TLX2:-0.379309296761;STAT1,3:-0.383310835605;CDX1,2,4:-0.415557726618;RFX1:-0.422509648283;NHLH1,2:-0.422798283277;POU5F1:-0.431664436184;ZFP161:-0.451742455595;NFE2:-0.468604156798;CRX:-0.471457630403;SPIB:-0.48543970748;MEF2{A,B,C,D}:-0.487824739214;PITX1..3:-0.489669040142;FOXO1,3,4:-0.49012840296;JUN:-0.49412631074;IKZF2:-0.524146724849;MAZ:-0.534210265393;MED-1{core}:-0.564244454665;FOXP1:-0.565804240952;CUX2:-0.57307301124;NKX2-3_NKX2-5:-0.615772371903;ETS1,2:-0.619499574428;HOXA9_MEIS1:-0.646199152824;BREu{core}:-0.65825546693;SOX5:-0.683065246687;LMO2:-0.686129048513;PAX5:-0.697016749805;PAX2:-0.705658622829;TGIF1:-0.741688945259;SNAI1..3:-0.779468591603;ATF5_CREB3:-0.783279356143;BPTF:-0.785807843443;GATA6:-0.78586406542;VSX1,2:-0.806688673488;EP300:-0.817679760283;RFX2..5_RFXANK_RFXAP:-0.856863241239;CEBPA,B_DDIT3:-0.856918733947;FOXP3:-0.885091404651;ZEB1:-0.899326208058;POU1F1:-0.900423054454;FOXA2:-0.912804744018;SP1:-0.913175287683;SOX2:-1.01016285896;PDX1:-1.03286782238;ATF2:-1.03623699307;FOXN1:-1.07991639193;RBPJ:-1.14746831163;NANOG:-1.22118886245;PAX6:-1.2269587236;ADNP_IRX_SIX_ZHX:-1.23021406629;FOX{D1,D2}:-1.24646754734;MYOD1:-1.24848076274;ATF4:-1.33116511265;SREBF1,2:-1.44470130358;RORA:-1.56889609805;FOX{F1,F2,J1}:-1.85905600875 | |top_motifs=UFEwm:1.81529635012;ALX4:1.77921625269;EN1,2:1.69501260246;NKX2-2,8:1.65601877751;KLF4:1.41957534417;HES1:1.32669609952;PAX1,9:1.24219609724;GATA4:1.22579190992;GZF1:1.21037619093;ZNF238:1.20951029739;PAX8:1.15871656151;HOX{A5,B5}:1.09982446122;TAL1_TCF{3,4,12}:1.03884348724;ZNF384:1.02138985132;TFDP1:1.02077369158;HSF1,2:0.99281671246;HOX{A6,A7,B6,B7}:0.96907719945;NR3C1:0.841127177995;CDC5L:0.838720959811;FOXL1:0.798167094326;RXR{A,B,G}:0.780946985585;NANOG{mouse}:0.772350853434;ESR1:0.763303343629;E2F1..5:0.76100457118;HOX{A4,D4}:0.740893822007;TEF:0.732289251306;NFIX:0.714330437215;NKX3-1:0.665527959885;YY1:0.653379427191;TOPORS:0.648384252198;GLI1..3:0.64660541429;PRDM1:0.620849474475;MYB:0.62033888563;GFI1B:0.618736350519;HAND1,2:0.6110727291;MYBL2:0.60096031433;SRF:0.585531397708;ZIC1..3:0.581320726856;IKZF1:0.560473323729;EVI1:0.538506985774;ARID5B:0.508524619385;ATF6:0.498994499644;RXRA_VDR{dimer}:0.495698711061;TLX1..3_NFIC{dimer}:0.494086903317;ZBTB6:0.493249238206;MZF1:0.457665510768;TEAD1:0.454289958143;NFE2L1:0.454175281927;TFCP2:0.441006903459;NKX3-2:0.435807668583;NKX6-1,2:0.431177700111;GFI1:0.428815068936;TP53:0.423668660942;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.420878956562;GCM1,2:0.408718422431;NFATC1..3:0.406039617355;NFE2L2:0.394527963352;SPZ1:0.354588017163;NR1H4:0.315717038633;FOXD3:0.272002326034;EBF1:0.25220566774;SOX17:0.243526430315;BACH2:0.231408421786;FOX{I1,J2}:0.227942668018;GTF2I:0.214606595446;ELK1,4_GABP{A,B1}:0.214155373777;ZNF143:0.213972240957;IRF1,2:0.204800925973;TFAP4:0.172789121632;POU3F1..4:0.170677191138;FOS_FOS{B,L1}_JUN{B,D}:0.154065572416;POU2F1..3:0.14883628714;XBP1:0.128731531194;XCPE1{core}:0.113259747506;TBP:0.0811643628696;FOXQ1:0.0803024411703;GTF2A1,2:0.0569663036219;ZNF423:0.0555692741045;MAFB:0.0347747666151;PAX3,7:0.0152190697441;LHX3,4:0.013214708323;AIRE:-0.000317228314667;TBX4,5:-0.00224980752055;ALX1:-0.0193232777277;PAX4:-0.0304321427708;bHLH_family:-0.0316966741146;NRF1:-0.0439297885371;HNF1A:-0.0439960059622;FOXM1:-0.0457527441305;HLF:-0.0558863987672;ESRRA:-0.0669289200105;TFAP2{A,C}:-0.0716380332562;HBP1_HMGB_SSRP1_UBTF:-0.0757062707286;PPARG:-0.0853032626161;PBX1:-0.101573180382;HIC1:-0.130594317625;AR:-0.136808678385;NR6A1:-0.155087994468;HIF1A:-0.163591326965;HMGA1,2:-0.165164553817;PATZ1:-0.166817392804;TFAP2B:-0.170242901025;RUNX1..3:-0.177134391583;MTE{core}:-0.190462042067;NFKB1_REL_RELA:-0.214663808066;DBP:-0.216946223117;T:-0.218249865395;EGR1..3:-0.230279302252;ONECUT1,2:-0.233447109224;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.234996960178;NR5A1,2:-0.237279305877;NFY{A,B,C}:-0.251734742838;ZNF148:-0.254436597827;POU6F1:-0.254829033938;FOSL2:-0.257755109092;STAT5{A,B}:-0.261162107771;STAT2,4,6:-0.269446223439;DMAP1_NCOR{1,2}_SMARC:-0.273940154029;OCT4_SOX2{dimer}:-0.279987497229;MYFfamily:-0.300807139419;ELF1,2,4:-0.302784808852;CREB1:-0.30708605698;AHR_ARNT_ARNT2:-0.307146671921;MTF1:-0.307774711499;SOX{8,9,10}:-0.30802580079;NFIL3:-0.308985556717;SPI1:-0.315040882577;SMAD1..7,9:-0.316201542729;REST:-0.323811571632;RREB1:-0.327362750347;IRF7:-0.329364526749;HNF4A_NR2F1,2:-0.332719817633;NKX2-1,4:-0.339935937605;HMX1:-0.355687144582;ZBTB16:-0.36735097261;PRRX1,2:-0.370408767952;LEF1_TCF7_TCF7L1,2:-0.378827890533;TLX2:-0.379309296761;STAT1,3:-0.383310835605;CDX1,2,4:-0.415557726618;RFX1:-0.422509648283;NHLH1,2:-0.422798283277;POU5F1:-0.431664436184;ZFP161:-0.451742455595;NFE2:-0.468604156798;CRX:-0.471457630403;SPIB:-0.48543970748;MEF2{A,B,C,D}:-0.487824739214;PITX1..3:-0.489669040142;FOXO1,3,4:-0.49012840296;JUN:-0.49412631074;IKZF2:-0.524146724849;MAZ:-0.534210265393;MED-1{core}:-0.564244454665;FOXP1:-0.565804240952;CUX2:-0.57307301124;NKX2-3_NKX2-5:-0.615772371903;ETS1,2:-0.619499574428;HOXA9_MEIS1:-0.646199152824;BREu{core}:-0.65825546693;SOX5:-0.683065246687;LMO2:-0.686129048513;PAX5:-0.697016749805;PAX2:-0.705658622829;TGIF1:-0.741688945259;SNAI1..3:-0.779468591603;ATF5_CREB3:-0.783279356143;BPTF:-0.785807843443;GATA6:-0.78586406542;VSX1,2:-0.806688673488;EP300:-0.817679760283;RFX2..5_RFXANK_RFXAP:-0.856863241239;CEBPA,B_DDIT3:-0.856918733947;FOXP3:-0.885091404651;ZEB1:-0.899326208058;POU1F1:-0.900423054454;FOXA2:-0.912804744018;SP1:-0.913175287683;SOX2:-1.01016285896;PDX1:-1.03286782238;ATF2:-1.03623699307;FOXN1:-1.07991639193;RBPJ:-1.14746831163;NANOG:-1.22118886245;PAX6:-1.2269587236;ADNP_IRX_SIX_ZHX:-1.23021406629;FOX{D1,D2}:-1.24646754734;MYOD1:-1.24848076274;ATF4:-1.33116511265;SREBF1,2:-1.44470130358;RORA:-1.56889609805;FOX{F1,F2,J1}:-1.85905600875 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11356-117H6;search_select_hide=table117:FF:11356-117H6 | |||
}} | }} | ||
Latest revision as of 17:54, 4 June 2020
| Name: | Preadipocyte - subcutaneous, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11981 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11981
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11981
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.176 |
| 10 | 10 | 0.0311 |
| 100 | 100 | 0.76 |
| 101 | 101 | 0.628 |
| 102 | 102 | 0.805 |
| 103 | 103 | 0.187 |
| 104 | 104 | 0.82 |
| 105 | 105 | 0.231 |
| 106 | 106 | 0.162 |
| 107 | 107 | 0.101 |
| 108 | 108 | 0.418 |
| 109 | 109 | 0.178 |
| 11 | 11 | 0.217 |
| 110 | 110 | 0.0539 |
| 111 | 111 | 0.211 |
| 112 | 112 | 0.282 |
| 113 | 113 | 0.00382 |
| 114 | 114 | 0.368 |
| 115 | 115 | 0.0163 |
| 116 | 116 | 0.0249 |
| 117 | 117 | 0.064 |
| 118 | 118 | 0.941 |
| 119 | 119 | 0.673 |
| 12 | 12 | 0.429 |
| 120 | 120 | 0.0436 |
| 121 | 121 | 0.858 |
| 122 | 122 | 0.0129 |
| 123 | 123 | 0.0575 |
| 124 | 124 | 0.881 |
| 125 | 125 | 0.1 |
| 126 | 126 | 0.715 |
| 127 | 127 | 0.799 |
| 128 | 128 | 0.308 |
| 129 | 129 | 0.902 |
| 13 | 13 | 0.676 |
| 130 | 130 | 0.558 |
| 131 | 131 | 0.16 |
| 132 | 132 | 0.651 |
| 133 | 133 | 0.0609 |
| 134 | 134 | 0.983 |
| 135 | 135 | 0.561 |
| 136 | 136 | 0.78 |
| 137 | 137 | 0.522 |
| 138 | 138 | 0.426 |
| 139 | 139 | 0.203 |
| 14 | 14 | 0.0846 |
| 140 | 140 | 0.75 |
| 141 | 141 | 0.598 |
| 142 | 142 | 0.545 |
| 143 | 143 | 0.103 |
| 144 | 144 | 0.835 |
| 145 | 145 | 0.575 |
| 146 | 146 | 0.501 |
| 147 | 147 | 0.0771 |
| 148 | 148 | 0.0769 |
| 149 | 149 | 0.163 |
| 15 | 15 | 0.998 |
| 150 | 150 | 0.0714 |
| 151 | 151 | 0.829 |
| 152 | 152 | 0.0411 |
| 153 | 153 | 0.829 |
| 154 | 154 | 0.827 |
| 155 | 155 | 0.0875 |
| 156 | 156 | 0.744 |
| 157 | 157 | 0.32 |
| 158 | 158 | 0.00968 |
| 159 | 159 | 0.315 |
| 16 | 16 | 0.0337 |
| 160 | 160 | 0.0991 |
| 161 | 161 | 0.39 |
| 162 | 162 | 0.185 |
| 163 | 163 | 0.795 |
| 164 | 164 | 0.121 |
| 165 | 165 | 0.75 |
| 166 | 166 | 0.572 |
| 167 | 167 | 0.747 |
| 168 | 168 | 0.841 |
| 169 | 169 | 0.0339 |
| 17 | 17 | 0.256 |
| 18 | 18 | 0.119 |
| 19 | 19 | 0.0182 |
| 2 | 2 | 0.268 |
| 20 | 20 | 0.579 |
| 21 | 21 | 0.00489 |
| 22 | 22 | 0.419 |
| 23 | 23 | 0.92 |
| 24 | 24 | 0.619 |
| 25 | 25 | 0.463 |
| 26 | 26 | 0.0685 |
| 27 | 27 | 0.235 |
| 28 | 28 | 0.176 |
| 29 | 29 | 0.0424 |
| 3 | 3 | 0.196 |
| 30 | 30 | 0.547 |
| 31 | 31 | 0.951 |
| 32 | 32 | 7.27825e-5 |
| 33 | 33 | 0.621 |
| 34 | 34 | 0.925 |
| 35 | 35 | 0.591 |
| 36 | 36 | 0.143 |
| 37 | 37 | 0.0753 |
| 38 | 38 | 0.882 |
| 39 | 39 | 0.211 |
| 4 | 4 | 0.896 |
| 40 | 40 | 0.149 |
| 41 | 41 | 0.26 |
| 42 | 42 | 0.614 |
| 43 | 43 | 0.626 |
| 44 | 44 | 0.0109 |
| 45 | 45 | 0.375 |
| 46 | 46 | 0.0728 |
| 47 | 47 | 0.301 |
| 48 | 48 | 0.27 |
| 49 | 49 | 0.91 |
| 5 | 5 | 0.695 |
| 50 | 50 | 0.643 |
| 51 | 51 | 0.583 |
| 52 | 52 | 0.8 |
| 53 | 53 | 0.358 |
| 54 | 54 | 0.947 |
| 55 | 55 | 0.583 |
| 56 | 56 | 0.687 |
| 57 | 57 | 0.885 |
| 58 | 58 | 0.656 |
| 59 | 59 | 0.0917 |
| 6 | 6 | 0.632 |
| 60 | 60 | 0.942 |
| 61 | 61 | 0.649 |
| 62 | 62 | 0.462 |
| 63 | 63 | 0.522 |
| 64 | 64 | 0.649 |
| 65 | 65 | 0.439 |
| 66 | 66 | 0.778 |
| 67 | 67 | 0.532 |
| 68 | 68 | 0.882 |
| 69 | 69 | 0.321 |
| 7 | 7 | 0.673 |
| 70 | 70 | 0.866 |
| 71 | 71 | 0.0401 |
| 72 | 72 | 0.961 |
| 73 | 73 | 0.0317 |
| 74 | 74 | 0.0167 |
| 75 | 75 | 0.0326 |
| 76 | 76 | 0.795 |
| 77 | 77 | 0.0471 |
| 78 | 78 | 0.989 |
| 79 | 79 | 0.0145 |
| 8 | 8 | 0.0442 |
| 80 | 80 | 0.158 |
| 81 | 81 | 0.732 |
| 82 | 82 | 0.645 |
| 83 | 83 | 0.161 |
| 84 | 84 | 0.558 |
| 85 | 85 | 0.689 |
| 86 | 86 | 0.568 |
| 87 | 87 | 0.0591 |
| 88 | 88 | 0.863 |
| 89 | 89 | 0.0657 |
| 9 | 9 | 0.289 |
| 90 | 90 | 0.76 |
| 91 | 91 | 0.862 |
| 92 | 92 | 0.619 |
| 93 | 93 | 0.626 |
| 94 | 94 | 0.571 |
| 95 | 95 | 0.0144 |
| 96 | 96 | 0.959 |
| 97 | 97 | 0.761 |
| 98 | 98 | 0.445 |
| 99 | 99 | 0.002 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11981
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002583 (subcutaneous preadipocyte)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0010317 (germ layer / neural crest derived structure)
0002072 (hypodermis)
0002416 (integumental system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000142 (human subcutaneous preadipocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
