FF:11403-118D8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005026 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005026 | ||
|accession_numbers=CAGE;DRX008411;DRR009283;DRZ000708;DRZ002093;DRZ012058;DRZ013443 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037151;DRR041517;DRZ007159 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003688,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004457,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0000042,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002417,UBERON:0002358,UBERON:0000916,UBERON:0003684,UBERON:0001178 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002579 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000137,FF:0000140 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.82!64.34!TCF21;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.58!37.16!HOXC5;;chr19:47523058..47523114,+!p1@NPAS1!1.53!32.81!NPAS1;;chr11:46299199..46299233,+!p1@CREB3L1!1.43!129.97!CREB3L1;;chr2:19558373..19558392,-!p1@OSR1!1.43!69.97!OSR1;;chr8:72756637..72756664,-!p3@MSC!1.43!29.44!MSC;;chr18:19749541..19749557,+!p1@GATA6!1.41!76.24!GATA6;;chr11:46299539..46299620,+!p2@CREB3L1!1.39!39.73!CREB3L1;;chr18:19749386..19749404,+!p2@GATA6!1.38!32.81!GATA6;;chr9:132427883..132427951,+!p2@PRRX2!1.33!20.59!PRRX2;;chr12:54402745..54402788,+!p1@HOXC8!1.33!20.43!HOXC8;;chr9:132427972..132428056,+!p1@PRRX2!1.26!22.36!PRRX2;;chr9:96717629..96717644,-!p1@BARX1!1.24!16.57!BARX1;;chr6:144329384..144329405,-!p1@PLAGL1!1.20!167.77!PLAGL1;;chr14:62162285..62162296,+!p3@HIF1A!1.18!72.38!HIF1A;;chr8:72756667..72756736,-!p2@MSC!1.18!22.04!MSC;;chr14:62162258..62162269,+!p2@HIF1A!1.15!125.63!HIF1A;;chr8:72756267..72756296,-!p4@MSC!1.14!18.98!MSC;;chr16:86600426..86600441,+!p1@FOXC2!1.13!30.56!FOXC2;;chr1:23885981..23886002,-!p1@ID3!1.12!2122.79!ID3;;chr17:46682321..46682362,-!p1@HOXB6!1.09!11.42!HOXB6;;chr5:72744594..72744609,-!p1@FOXD1!1.05!47.29!FOXD1;;chr12:80085061..80085119,-!p6@PAWR!1.05!16.25!PAWR;;chr8:25902876..25902936,-!p1@EBF2!1.05!10.13!EBF2;;chr18:53068911..53068935,-!p4@TCF4!1.04!11.26!TCF4;;chr7:44143978..44143989,+!p2@AEBP1!1.03!18.02!AEBP1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.03!9.81!HOXC5;;chr7:44143925..44143970,+!p1@AEBP1!0.99!202.19!AEBP1;;chr19:50432453..50432468,+!p1@ATF5!0.98!493.66!ATF5;;chr17:1959369..1959388,+!p2@HIC1!0.98!22.84!HIC1;;chr8:72756213..72756243,-!p5@MSC!0.98!11.10!MSC;;chr4:111544219..111544240,-!p1@PITX2!0.98!8.53!PITX2;;chr4:111558135..111558198,-!p2@PITX2!0.97!8.36!PITX2;;chr7:1577899..1577943,+!p3@MAFK!0.97!8.36!MAFK;;chr7:27183263..27183284,-!p2@HOXA5!0.97!8.36!HOXA5;;chr8:49833948..49833973,-!p2@SNAI2!0.96!53.56!SNAI2;;chr14:62213827..62213853,+!p6@HIF1A!0.96!11.58!HIF1A;;chr16:86544113..86544145,+!p1@FOXF1!0.96!10.13!FOXF1;;chr5:139492456..139492489,+!p7@PURA!0.96!8.20!PURA;;chr1:170632285..170632309,+!p1@PRRX1!0.94!8.69!PRRX1;;chr8:72756063..72756125,-!p1@MSC!0.92!15.12!MSC;;chr4:174450089..174450153,-!p2@HAND2!0.92!7.40!HAND2;;chrX:106960180..106960197,-!p2@TSC22D3!0.90!27.83!TSC22D3;;chr15:96874145..96874166,+!p7@NR2F2!0.90!13.83!NR2F2;;chr14:62203595..62203676,+!p4@HIF1A!0.90!13.51!HIF1A;;chr5:72744445..72744466,-!p2@FOXD1!0.90!11.90!FOXD1;;chr9:96717678..96717689,-!p2@BARX1!0.90!6.92!BARX1;;chr2:121493425..121493474,+!p1@GLI2!0.89!15.28!GLI2;;chr11:12696071..12696086,+!p3@TEAD1!0.89!9.01!TEAD1;;chrY:2803415..2803468,+!p1@ZFY!0.89!6.76!ZFY;;chr17:46688334..46688385,-!p1@HOXB7!0.88!9.81!HOXB7;;chr2:8822176..8822196,+!p1@ID2!0.87!960.78!ID2;;chr17:46703687..46703740,-!p1@HOXB9!0.87!6.43!HOXB9;;chr12:54402790..54402805,+!p2@HOXC8!0.87!6.43!HOXC8;;chrY:21906594..21906622,-!p1@KDM5D!0.87!6.43!KDM5D;;chr8:49833978..49833996,-!p1@SNAI2!0.86!137.21!SNAI2;;chr6:144289132..144289134,-!p3@PLAGL1!0.86!15.12!PLAGL1;;chr17:46687959..46688007,-!p2@HOXB7!0.86!8.85!HOXB7;;chr7:27183291..27183324,-!p1@HOXA5!0.86!6.27!HOXA5;;chr1:170633058..170633084,+!p5@PRRX1!0.86!6.27!PRRX1;;chr6:19837592..19837621,+!p1@ID4!0.85!39.09!ID4;;chr10:63809013..63809041,+!p3@ARID5B!0.85!35.71!ARID5B;;chr2:239756671..239756732,+!p1@TWIST2!0.85!20.75!TWIST2;;chr15:96869255..96869291,+!p6@NR2F2!0.85!11.58!NR2F2;;chr2:119605214..119605230,-!p1@EN1!0.85!6.11!EN1;;chr10:131762504..131762555,-!p1@EBF3!0.85!6.11!EBF3;;chr8:106330656..106330684,+!p1@ZFPM2!0.84!16.25!ZFPM2;;chr17:38498594..38498661,+!p2@RARA!0.83!20.27!RARA;;chr7:27183114..27183138,-!p3@HOXA5!0.83!5.79!HOXA5;;chr5:92918919..92918942,+!p1@NR2F1!0.82!26.86!NR2F1;;chr14:62213758..62213774,+!p8@HIF1A!0.82!7.40!HIF1A;;chr7:27196267..27196311,-!p1@HOXA7!0.82!5.63!HOXA7;;chr17:46622070..46622109,-!p1@HOXB2!0.81!12.87!HOXB2;;chr2:121493492..121493537,+!p2@GLI2!0.81!9.33!GLI2;;chr2:85980951..85981004,+!p1@ATOH8!0.81!9.33!ATOH8;;chr14:62203749..62203798,+!p5@HIF1A!0.81!8.69!HIF1A;;chr17:46621937..46621966,-!p2@HOXB2!0.80!15.28!HOXB2;;chr18:19749517..19749531,+!p3@GATA6!0.80!9.81!GATA6;;chr7:44143997..44144008,+!p3@AEBP1!0.80!6.92!AEBP1;;chr7:27153454..27153469,-!p2@HOXA3!0.80!5.31!HOXA3;;chr12:54393880..54393962,+!p1@HOXC9!0.80!5.31!HOXC9;;chr14:62214151..62214164,+!p11@HIF1A!0.80!5.31!HIF1A;;chr1:170632959..170632987,+!p4@PRRX1!0.79!5.79!PRRX1;;chr16:31076332..31076388,-!p3@ZNF668!0.79!5.15!ZNF668;;chr11:46299443..46299459,+!p4@CREB3L1!0.78!4.99!CREB3L1;;chr12:54402729..54402743,+!p3@HOXC8!0.78!4.99!HOXC8;;chr15:96874244..96874259,+!p5@NR2F2!0.77!12.71!NR2F2;;chr4:174451370..174451387,-!p1@HAND2!0.77!4.83!HAND2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.76!52.28!GLIS2;;chr7:150945754..150945789,-!p2@SMARCD3!0.76!15.92!SMARCD3;;chr14:62162224..62162254,+!p1@HIF1A!0.75!747.65!HIF1A;;chr12:80085120..80085156,-!p14@PAWR!0.75!4.66!PAWR;;chr7:27192185..27192209,-!p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| |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.82!64.34!TCF21;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.58!37.16!HOXC5;;chr19:47523058..47523114,+!p1@NPAS1!1.53!32.81!NPAS1;;chr11:46299199..46299233,+!p1@CREB3L1!1.43!129.97!CREB3L1;;chr2:19558373..19558392,-!p1@OSR1!1.43!69.97!OSR1;;chr8:72756637..72756664,-!p3@MSC!1.43!29.44!MSC;;chr18:19749541..19749557,+!p1@GATA6!1.41!76.24!GATA6;;chr11:46299539..46299620,+!p2@CREB3L1!1.39!39.73!CREB3L1;;chr18:19749386..19749404,+!p2@GATA6!1.38!32.81!GATA6;;chr9:132427883..132427951,+!p2@PRRX2!1.33!20.59!PRRX2;;chr12:54402745..54402788,+!p1@HOXC8!1.33!20.43!HOXC8;;chr9:132427972..132428056,+!p1@PRRX2!1.26!22.36!PRRX2;;chr9:96717629..96717644,-!p1@BARX1!1.24!16.57!BARX1;;chr6:144329384..144329405,-!p1@PLAGL1!1.20!167.77!PLAGL1;;chr14:62162285..62162296,+!p3@HIF1A!1.18!72.38!HIF1A;;chr8:72756667..72756736,-!p2@MSC!1.18!22.04!MSC;;chr14:62162258..62162269,+!p2@HIF1A!1.15!125.63!HIF1A;;chr8:72756267..72756296,-!p4@MSC!1.14!18.98!MSC;;chr16:86600426..86600441,+!p1@FOXC2!1.13!30.56!FOXC2;;chr1:23885981..23886002,-!p1@ID3!1.12!2122.79!ID3;;chr17:46682321..46682362,-!p1@HOXB6!1.09!11.42!HOXB6;;chr5:72744594..72744609,-!p1@FOXD1!1.05!47.29!FOXD1;;chr12:80085061..80085119,-!p6@PAWR!1.05!16.25!PAWR;;chr8:25902876..25902936,-!p1@EBF2!1.05!10.13!EBF2;;chr18:53068911..53068935,-!p4@TCF4!1.04!11.26!TCF4;;chr7:44143978..44143989,+!p2@AEBP1!1.03!18.02!AEBP1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.03!9.81!HOXC5;;chr7:44143925..44143970,+!p1@AEBP1!0.99!202.19!AEBP1;;chr19:50432453..50432468,+!p1@ATF5!0.98!493.66!ATF5;;chr17:1959369..1959388,+!p2@HIC1!0.98!22.84!HIC1;;chr8:72756213..72756243,-!p5@MSC!0.98!11.10!MSC;;chr4:111544219..111544240,-!p1@PITX2!0.98!8.53!PITX2;;chr4:111558135..111558198,-!p2@PITX2!0.97!8.36!PITX2;;chr7:1577899..1577943,+!p3@MAFK!0.97!8.36!MAFK;;chr7:27183263..27183284,-!p2@HOXA5!0.97!8.36!HOXA5;;chr8:49833948..49833973,-!p2@SNAI2!0.96!53.56!SNAI2;;chr14:62213827..62213853,+!p6@HIF1A!0.96!11.58!HIF1A;;chr16:86544113..86544145,+!p1@FOXF1!0.96!10.13!FOXF1;;chr5:139492456..139492489,+!p7@PURA!0.96!8.20!PURA;;chr1:170632285..170632309,+!p1@PRRX1!0.94!8.69!PRRX1;;chr8:72756063..72756125,-!p1@MSC!0.92!15.12!MSC;;chr4:174450089..174450153,-!p2@HAND2!0.92!7.40!HAND2;;chrX:106960180..106960197,-!p2@TSC22D3!0.90!27.83!TSC22D3;;chr15:96874145..96874166,+!p7@NR2F2!0.90!13.83!NR2F2;;chr14:62203595..62203676,+!p4@HIF1A!0.90!13.51!HIF1A;;chr5:72744445..72744466,-!p2@FOXD1!0.90!11.90!FOXD1;;chr9:96717678..96717689,-!p2@BARX1!0.90!6.92!BARX1;;chr2:121493425..121493474,+!p1@GLI2!0.89!15.28!GLI2;;chr11:12696071..12696086,+!p3@TEAD1!0.89!9.01!TEAD1;;chrY:2803415..2803468,+!p1@ZFY!0.89!6.76!ZFY;;chr17:46688334..46688385,-!p1@HOXB7!0.88!9.81!HOXB7;;chr2:8822176..8822196,+!p1@ID2!0.87!960.78!ID2;;chr17:46703687..46703740,-!p1@HOXB9!0.87!6.43!HOXB9;;chr12:54402790..54402805,+!p2@HOXC8!0.87!6.43!HOXC8;;chrY:21906594..21906622,-!p1@KDM5D!0.87!6.43!KDM5D;;chr8:49833978..49833996,-!p1@SNAI2!0.86!137.21!SNAI2;;chr6:144289132..144289134,-!p3@PLAGL1!0.86!15.12!PLAGL1;;chr17:46687959..46688007,-!p2@HOXB7!0.86!8.85!HOXB7;;chr7:27183291..27183324,-!p1@HOXA5!0.86!6.27!HOXA5;;chr1:170633058..170633084,+!p5@PRRX1!0.86!6.27!PRRX1;;chr6:19837592..19837621,+!p1@ID4!0.85!39.09!ID4;;chr10:63809013..63809041,+!p3@ARID5B!0.85!35.71!ARID5B;;chr2:239756671..239756732,+!p1@TWIST2!0.85!20.75!TWIST2;;chr15:96869255..96869291,+!p6@NR2F2!0.85!11.58!NR2F2;;chr2:119605214..119605230,-!p1@EN1!0.85!6.11!EN1;;chr10:131762504..131762555,-!p1@EBF3!0.85!6.11!EBF3;;chr8:106330656..106330684,+!p1@ZFPM2!0.84!16.25!ZFPM2;;chr17:38498594..38498661,+!p2@RARA!0.83!20.27!RARA;;chr7:27183114..27183138,-!p3@HOXA5!0.83!5.79!HOXA5;;chr5:92918919..92918942,+!p1@NR2F1!0.82!26.86!NR2F1;;chr14:62213758..62213774,+!p8@HIF1A!0.82!7.40!HIF1A;;chr7:27196267..27196311,-!p1@HOXA7!0.82!5.63!HOXA7;;chr17:46622070..46622109,-!p1@HOXB2!0.81!12.87!HOXB2;;chr2:121493492..121493537,+!p2@GLI2!0.81!9.33!GLI2;;chr2:85980951..85981004,+!p1@ATOH8!0.81!9.33!ATOH8;;chr14:62203749..62203798,+!p5@HIF1A!0.81!8.69!HIF1A;;chr17:46621937..46621966,-!p2@HOXB2!0.80!15.28!HOXB2;;chr18:19749517..19749531,+!p3@GATA6!0.80!9.81!GATA6;;chr7:44143997..44144008,+!p3@AEBP1!0.80!6.92!AEBP1;;chr7:27153454..27153469,-!p2@HOXA3!0.80!5.31!HOXA3;;chr12:54393880..54393962,+!p1@HOXC9!0.80!5.31!HOXC9;;chr14:62214151..62214164,+!p11@HIF1A!0.80!5.31!HIF1A;;chr1:170632959..170632987,+!p4@PRRX1!0.79!5.79!PRRX1;;chr16:31076332..31076388,-!p3@ZNF668!0.79!5.15!ZNF668;;chr11:46299443..46299459,+!p4@CREB3L1!0.78!4.99!CREB3L1;;chr12:54402729..54402743,+!p3@HOXC8!0.78!4.99!HOXC8;;chr15:96874244..96874259,+!p5@NR2F2!0.77!12.71!NR2F2;;chr4:174451370..174451387,-!p1@HAND2!0.77!4.83!HAND2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.76!52.28!GLIS2;;chr7:150945754..150945789,-!p2@SMARCD3!0.76!15.92!SMARCD3;;chr14:62162224..62162254,+!p1@HIF1A!0.75!747.65!HIF1A;;chr12:80085120..80085156,-!p14@PAWR!0.75!4.66!PAWR;;chr7:27192185..27192209,-!p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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002334;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002579;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323 | |||
|ffid_belonging_in_development=CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor3.CNhs12013.11403-118D8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor3.CNhs12013.11403-118D8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor3.CNhs12013.11403-118D8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor3.CNhs12013.11403-118D8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor3.CNhs12013.11403-118D8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11403-118D8 | |id=FF:11403-118D8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000140 | ||
|is_obsolete= | |||
|library_id=CNhs12013 | |||
|library_id_phase_based=2:CNhs12013 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11403 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10010.ACTTGA.11403 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11403 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10010.ACTTGA.11403 | |||
|name=Preadipocyte - omental, donor3 | |name=Preadipocyte - omental, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12013,LSID837,release011,COMPLETED | |profile_hcage=CNhs12013,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10010,,, | |profile_srnaseq=SRhi10010,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=N/A | |rna_catalog_number=N/A | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118D8 | |rna_tube_id=118D8 | ||
|rna_weight_ug=28 | |rna_weight_ug=28 | ||
|rnaseq_library_id=SRhi10010.ACTTGA | |||
|sample_age=34 | |sample_age=34 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=F-OP-F | |sample_cell_catalog=F-OP-F | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.41682736552081e-219!GO:0005737;cytoplasm;1.79989835727173e-177!GO:0043226;organelle;2.14195876321303e-149!GO:0043229;intracellular organelle;4.5473492278099e-149!GO:0043231;intracellular membrane-bound organelle;4.07075869603198e-146!GO:0043227;membrane-bound organelle;6.91659153956868e-146!GO:0044444;cytoplasmic part;3.5131397960982e-137!GO:0044422;organelle part;2.56976008177696e-108!GO:0044446;intracellular organelle part;5.81163651168427e-107!GO:0005515;protein binding;2.35825108095525e-74!GO:0032991;macromolecular complex;3.08416818098046e-72!GO:0030529;ribonucleoprotein complex;5.15401241911412e-69!GO:0044238;primary metabolic process;7.9754088171231e-69!GO:0044237;cellular metabolic process;4.24185619690339e-68!GO:0043170;macromolecule metabolic process;8.86900025446236e-63!GO:0043233;organelle lumen;1.01886682473314e-57!GO:0031974;membrane-enclosed lumen;1.01886682473314e-57!GO:0005739;mitochondrion;2.62458812252566e-55!GO:0031090;organelle membrane;1.19863336809063e-53!GO:0003723;RNA binding;4.79797133622097e-52!GO:0044428;nuclear part;2.84910472207062e-50!GO:0019538;protein metabolic process;1.47319442421136e-48!GO:0005840;ribosome;6.00490850347675e-44!GO:0044260;cellular macromolecule metabolic process;1.28576199151453e-43!GO:0015031;protein transport;6.93640283648066e-43!GO:0006412;translation;9.76368570596082e-43!GO:0044267;cellular protein metabolic process;1.14147786052507e-42!GO:0033036;macromolecule localization;1.01994067914269e-41!GO:0005634;nucleus;1.26102323915102e-40!GO:0045184;establishment of protein localization;4.34393148258643e-40!GO:0003735;structural constituent of ribosome;2.72094221087388e-39!GO:0008104;protein localization;2.91281137195208e-39!GO:0009058;biosynthetic process;3.29679644218174e-39!GO:0016043;cellular component organization and biogenesis;6.36422420610768e-39!GO:0044429;mitochondrial part;6.72050145608637e-38!GO:0009059;macromolecule biosynthetic process;4.38994866910164e-36!GO:0005829;cytosol;1.15919989268427e-35!GO:0043234;protein complex;6.94445728872358e-35!GO:0006396;RNA processing;9.69269011847364e-35!GO:0044249;cellular biosynthetic process;2.45387554736421e-34!GO:0031967;organelle envelope;7.64275918292529e-34!GO:0033279;ribosomal subunit;1.29137863417674e-33!GO:0031975;envelope;1.35367564757561e-33!GO:0046907;intracellular transport;8.87147384242239e-33!GO:0031981;nuclear lumen;4.37174386732974e-32!GO:0043283;biopolymer metabolic process;3.41763411943309e-30!GO:0010467;gene expression;9.59054205559752e-30!GO:0016071;mRNA metabolic process;1.94705999503611e-28!GO:0006886;intracellular protein transport;3.79283649495046e-28!GO:0005783;endoplasmic reticulum;2.44662492262138e-26!GO:0005740;mitochondrial envelope;3.69849952639541e-26!GO:0008380;RNA splicing;3.90612631629264e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.11889975461985e-25!GO:0031966;mitochondrial membrane;1.06421368335046e-24!GO:0006397;mRNA processing;5.03415230133194e-24!GO:0012505;endomembrane system;2.25428178928516e-23!GO:0019866;organelle inner membrane;5.36571461499344e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.06552708815876e-22!GO:0005743;mitochondrial inner membrane;4.10581969728008e-22!GO:0006119;oxidative phosphorylation;2.68528371593327e-21!GO:0065003;macromolecular complex assembly;5.51993643733967e-21!GO:0044432;endoplasmic reticulum part;7.3245399849013e-21!GO:0006457;protein folding;8.8313935462956e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.66728533038894e-20!GO:0005654;nucleoplasm;1.85174636562615e-20!GO:0005794;Golgi apparatus;2.9486815926244e-20!GO:0051649;establishment of cellular localization;5.71697145579571e-20!GO:0044445;cytosolic part;6.31767879388018e-20!GO:0051641;cellular localization;6.48413170886815e-20!GO:0022607;cellular component assembly;6.32850849148395e-19!GO:0005681;spliceosome;2.32687161907396e-18!GO:0048770;pigment granule;6.87336580795938e-18!GO:0042470;melanosome;6.87336580795938e-18!GO:0044455;mitochondrial membrane part;6.87336580795938e-18!GO:0015934;large ribosomal subunit;1.46440294475765e-17!GO:0006996;organelle organization and biogenesis;2.2000688672304e-17!GO:0044451;nucleoplasm part;3.80748849810756e-17!GO:0015935;small ribosomal subunit;5.8205252139784e-17!GO:0048193;Golgi vesicle transport;2.05483940286875e-16!GO:0008134;transcription factor binding;3.89706541511411e-16!GO:0043228;non-membrane-bound organelle;4.06348426378762e-16!GO:0043232;intracellular non-membrane-bound organelle;4.06348426378762e-16!GO:0005746;mitochondrial respiratory chain;8.29623137423309e-16!GO:0006512;ubiquitin cycle;1.54183450364932e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.59382503945525e-15!GO:0016462;pyrophosphatase activity;1.71641217486025e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.47770754083976e-15!GO:0022618;protein-RNA complex assembly;2.75224604704239e-15!GO:0017111;nucleoside-triphosphatase activity;3.84210362196164e-15!GO:0016874;ligase activity;7.68462994870015e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.2341498993288e-14!GO:0051082;unfolded protein binding;1.58289990282034e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.92229632910186e-14!GO:0016192;vesicle-mediated transport;2.70282107481279e-14!GO:0031980;mitochondrial lumen;2.80398213513317e-14!GO:0005759;mitochondrial matrix;2.80398213513317e-14!GO:0000166;nucleotide binding;3.75390320032888e-14!GO:0006605;protein targeting;4.42996600485667e-14!GO:0050136;NADH dehydrogenase (quinone) activity;4.9484168506886e-14!GO:0003954;NADH dehydrogenase activity;4.9484168506886e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.9484168506886e-14!GO:0051186;cofactor metabolic process;5.73021585835746e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;6.09042510894007e-14!GO:0005789;endoplasmic reticulum membrane;6.77477352977206e-14!GO:0008135;translation factor activity, nucleic acid binding;7.01869521063642e-14!GO:0044265;cellular macromolecule catabolic process;8.26701009893733e-14!GO:0044257;cellular protein catabolic process;1.19160517060859e-13!GO:0019941;modification-dependent protein catabolic process;1.21032753603731e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.21032753603731e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.62137146879632e-13!GO:0043285;biopolymer catabolic process;2.57075335285116e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.73510571581421e-13!GO:0043412;biopolymer modification;3.49167856945098e-13!GO:0000502;proteasome complex (sensu Eukaryota);5.7473788844693e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.83489413389701e-13!GO:0005730;nucleolus;1.27926125283698e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.43119127059412e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.7407424828641e-12!GO:0045271;respiratory chain complex I;2.7407424828641e-12!GO:0005747;mitochondrial respiratory chain complex I;2.7407424828641e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.78416491999588e-12!GO:0042773;ATP synthesis coupled electron transport;2.78416491999588e-12!GO:0006464;protein modification process;3.10901731114886e-12!GO:0030163;protein catabolic process;3.66754356490725e-12!GO:0009057;macromolecule catabolic process;4.3616025218079e-12!GO:0005793;ER-Golgi intermediate compartment;4.81888957535195e-12!GO:0005761;mitochondrial ribosome;5.61602980168697e-12!GO:0000313;organellar ribosome;5.61602980168697e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.67490068430939e-12!GO:0044248;cellular catabolic process;1.74069697449274e-11!GO:0016070;RNA metabolic process;4.97025232629172e-11!GO:0006732;coenzyme metabolic process;5.36730941468958e-11!GO:0003712;transcription cofactor activity;8.74527524950722e-11!GO:0003743;translation initiation factor activity;1.04409938261292e-10!GO:0003676;nucleic acid binding;1.73777351377103e-10!GO:0009055;electron carrier activity;2.27836322448707e-10!GO:0048523;negative regulation of cellular process;3.31988814124969e-10!GO:0032553;ribonucleotide binding;4.19092929169378e-10!GO:0032555;purine ribonucleotide binding;4.19092929169378e-10!GO:0006413;translational initiation;4.29428843776742e-10!GO:0012501;programmed cell death;5.23840509730505e-10!GO:0017076;purine nucleotide binding;6.71417688294049e-10!GO:0044431;Golgi apparatus part;9.97506125299202e-10!GO:0005788;endoplasmic reticulum lumen;1.06354536749751e-09!GO:0043687;post-translational protein modification;1.1314624384265e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.21489689385353e-09!GO:0000375;RNA splicing, via transesterification reactions;1.21489689385353e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.21489689385353e-09!GO:0006915;apoptosis;1.33890783682051e-09!GO:0009259;ribonucleotide metabolic process;1.48818586285135e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.64007095534603e-09!GO:0008639;small protein conjugating enzyme activity;2.36164163388033e-09!GO:0008565;protein transporter activity;2.6675152475414e-09!GO:0019787;small conjugating protein ligase activity;3.20475062173452e-09!GO:0004842;ubiquitin-protein ligase activity;4.62957800398993e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.66650651964702e-09!GO:0009150;purine ribonucleotide metabolic process;5.87401016037362e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.93729896937796e-09!GO:0008219;cell death;6.55344047065483e-09!GO:0016265;death;6.55344047065483e-09!GO:0009199;ribonucleoside triphosphate metabolic process;7.06225250794819e-09!GO:0006446;regulation of translational initiation;7.76150926889747e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.96819355528524e-09!GO:0006163;purine nucleotide metabolic process;8.49869790761176e-09!GO:0031965;nuclear membrane;8.49869790761176e-09!GO:0009141;nucleoside triphosphate metabolic process;1.08258585813616e-08!GO:0005635;nuclear envelope;1.19539729800543e-08!GO:0005768;endosome;1.19539729800543e-08!GO:0006259;DNA metabolic process;1.2136329628735e-08!GO:0016604;nuclear body;1.30698942469849e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.35574825559396e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.35574825559396e-08!GO:0003714;transcription corepressor activity;1.38359952258111e-08!GO:0048519;negative regulation of biological process;1.90062070315273e-08!GO:0030120;vesicle coat;2.04006105675007e-08!GO:0030662;coated vesicle membrane;2.04006105675007e-08!GO:0015986;ATP synthesis coupled proton transport;2.1078729969991e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.1078729969991e-08!GO:0042254;ribosome biogenesis and assembly;2.29301730578153e-08!GO:0016881;acid-amino acid ligase activity;2.29301730578153e-08!GO:0009260;ribonucleotide biosynthetic process;2.33922167722691e-08!GO:0006913;nucleocytoplasmic transport;2.61853370210437e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.64952085887805e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.64952085887805e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.90559913903847e-08!GO:0006164;purine nucleotide biosynthetic process;4.47630205793692e-08!GO:0051169;nuclear transport;4.56390437409366e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.3321496304569e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.3321496304569e-08!GO:0016564;transcription repressor activity;5.87189157902644e-08!GO:0046034;ATP metabolic process;1.05820628555846e-07!GO:0044453;nuclear membrane part;1.10256403183952e-07!GO:0048475;coated membrane;1.27349000212981e-07!GO:0030117;membrane coat;1.27349000212981e-07!GO:0006366;transcription from RNA polymerase II promoter;1.366334363522e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.39346226606662e-07!GO:0031988;membrane-bound vesicle;1.40914206541129e-07!GO:0016607;nuclear speck;1.62979613724904e-07!GO:0019829;cation-transporting ATPase activity;1.73394758765185e-07!GO:0006399;tRNA metabolic process;1.9101986364317e-07!GO:0009060;aerobic respiration;1.9101986364317e-07!GO:0017038;protein import;1.98020817575696e-07!GO:0006461;protein complex assembly;2.0007184818036e-07!GO:0003924;GTPase activity;2.22688274712012e-07!GO:0005524;ATP binding;2.29410508835066e-07!GO:0042623;ATPase activity, coupled;2.62558433441418e-07!GO:0032559;adenyl ribonucleotide binding;2.94149472856207e-07!GO:0016887;ATPase activity;3.08467291443961e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.08849294001706e-07!GO:0006754;ATP biosynthetic process;3.5105333970384e-07!GO:0006753;nucleoside phosphate metabolic process;3.5105333970384e-07!GO:0005773;vacuole;3.718216158273e-07!GO:0000139;Golgi membrane;4.00466990511497e-07!GO:0005798;Golgi-associated vesicle;4.13726891912134e-07!GO:0051188;cofactor biosynthetic process;5.26704133514597e-07!GO:0030554;adenyl nucleotide binding;5.59048366011847e-07!GO:0008361;regulation of cell size;6.64387153085512e-07!GO:0043069;negative regulation of programmed cell death;7.49807439351165e-07!GO:0031252;leading edge;9.32902498258959e-07!GO:0045333;cellular respiration;1.0036625578614e-06!GO:0016049;cell growth;1.01332480710818e-06!GO:0031982;vesicle;1.01885047841034e-06!GO:0051246;regulation of protein metabolic process;1.08747683749612e-06!GO:0009056;catabolic process;1.08747683749612e-06!GO:0008654;phospholipid biosynthetic process;1.09098112421229e-06!GO:0016491;oxidoreductase activity;1.15095423841889e-06!GO:0031410;cytoplasmic vesicle;1.21871561025752e-06!GO:0065002;intracellular protein transport across a membrane;1.76520998129988e-06!GO:0043066;negative regulation of apoptosis;1.87926683643041e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.11167825230656e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.11167825230656e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.11167825230656e-06!GO:0043067;regulation of programmed cell death;2.84541114831684e-06!GO:0050794;regulation of cellular process;2.92999747723512e-06!GO:0007049;cell cycle;3.05957741110947e-06!GO:0043038;amino acid activation;3.16973226698194e-06!GO:0006418;tRNA aminoacylation for protein translation;3.16973226698194e-06!GO:0043039;tRNA aminoacylation;3.16973226698194e-06!GO:0032446;protein modification by small protein conjugation;3.29504530114064e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.51485904370389e-06!GO:0051789;response to protein stimulus;3.74144324931813e-06!GO:0006986;response to unfolded protein;3.74144324931813e-06!GO:0007005;mitochondrion organization and biogenesis;3.84019555952135e-06!GO:0016567;protein ubiquitination;3.85530540737422e-06!GO:0006752;group transfer coenzyme metabolic process;4.539113774614e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.66687101916614e-06!GO:0000151;ubiquitin ligase complex;4.66687101916614e-06!GO:0031324;negative regulation of cellular metabolic process;4.89009727272624e-06!GO:0042981;regulation of apoptosis;4.90040634129976e-06!GO:0006099;tricarboxylic acid cycle;5.07755419691953e-06!GO:0046356;acetyl-CoA catabolic process;5.07755419691953e-06!GO:0000323;lytic vacuole;5.47380072257717e-06!GO:0005764;lysosome;5.47380072257717e-06!GO:0005643;nuclear pore;5.70055385167167e-06!GO:0044440;endosomal part;5.84192922618927e-06!GO:0010008;endosome membrane;5.84192922618927e-06!GO:0001558;regulation of cell growth;5.97884462299591e-06!GO:0051187;cofactor catabolic process;6.21381460699991e-06!GO:0016853;isomerase activity;6.38085183383676e-06!GO:0008026;ATP-dependent helicase activity;7.31170398549324e-06!GO:0030036;actin cytoskeleton organization and biogenesis;7.37503954955121e-06!GO:0009109;coenzyme catabolic process;8.05805522454481e-06!GO:0005667;transcription factor complex;8.06381765834848e-06!GO:0006916;anti-apoptosis;8.21198090588871e-06!GO:0045259;proton-transporting ATP synthase complex;8.45681064094341e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.73197135504801e-06!GO:0030532;small nuclear ribonucleoprotein complex;8.75943508698945e-06!GO:0045454;cell redox homeostasis;1.18542183295996e-05!GO:0004386;helicase activity;1.27498668325898e-05!GO:0006974;response to DNA damage stimulus;1.35703228848149e-05!GO:0006613;cotranslational protein targeting to membrane;1.37688084236387e-05!GO:0006084;acetyl-CoA metabolic process;1.50318368272206e-05!GO:0030133;transport vesicle;1.66152950413081e-05!GO:0009108;coenzyme biosynthetic process;1.83433555469682e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.16810493488313e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.34652739154142e-05!GO:0045786;negative regulation of progression through cell cycle;2.44603179698045e-05!GO:0005525;GTP binding;2.56775974566244e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.61736206433553e-05!GO:0005770;late endosome;2.88323188112883e-05!GO:0006364;rRNA processing;2.89367979559267e-05!GO:0005791;rough endoplasmic reticulum;3.05254523168345e-05!GO:0046930;pore complex;3.28043009450144e-05!GO:0006793;phosphorus metabolic process;3.32109387926329e-05!GO:0006796;phosphate metabolic process;3.32109387926329e-05!GO:0009117;nucleotide metabolic process;3.52704648160377e-05!GO:0009892;negative regulation of metabolic process;3.64452806919183e-05!GO:0030029;actin filament-based process;4.23955318067436e-05!GO:0051170;nuclear import;4.49354801149023e-05!GO:0016740;transferase activity;4.87211470188621e-05!GO:0016072;rRNA metabolic process;4.92722871040923e-05!GO:0030867;rough endoplasmic reticulum membrane;4.96254887240143e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.96613167176834e-05!GO:0033116;ER-Golgi intermediate compartment membrane;5.30288041188615e-05!GO:0000245;spliceosome assembly;5.50126644576281e-05!GO:0005905;coated pit;5.81203185855851e-05!GO:0019867;outer membrane;6.37804065844162e-05!GO:0006606;protein import into nucleus;6.59893788065196e-05!GO:0016859;cis-trans isomerase activity;6.9976117938825e-05!GO:0050789;regulation of biological process;7.4321434340288e-05!GO:0016787;hydrolase activity;8.04484420149131e-05!GO:0005839;proteasome core complex (sensu Eukaryota);8.71527443656657e-05!GO:0051726;regulation of cell cycle;9.07789414542775e-05!GO:0006091;generation of precursor metabolites and energy;0.000103669927455458!GO:0005762;mitochondrial large ribosomal subunit;0.000103669927455458!GO:0000315;organellar large ribosomal subunit;0.000103669927455458!GO:0032561;guanyl ribonucleotide binding;0.000103669927455458!GO:0019001;guanyl nucleotide binding;0.000103669927455458!GO:0006403;RNA localization;0.000108524119086868!GO:0046474;glycerophospholipid biosynthetic process;0.000113983306801707!GO:0050657;nucleic acid transport;0.000114495459607449!GO:0051236;establishment of RNA localization;0.000114495459607449!GO:0050658;RNA transport;0.000114495459607449!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000120246145342947!GO:0031968;organelle outer membrane;0.000120550314976556!GO:0016310;phosphorylation;0.000125554626499981!GO:0000074;regulation of progression through cell cycle;0.000129540888751709!GO:0003697;single-stranded DNA binding;0.000138366416604089!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000141826088684852!GO:0015980;energy derivation by oxidation of organic compounds;0.000148728259521553!GO:0019843;rRNA binding;0.000160861672795679!GO:0006612;protein targeting to membrane;0.000162100468519007!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00016394000257259!GO:0016044;membrane organization and biogenesis;0.00017482054612633!GO:0005048;signal sequence binding;0.000175115275944727!GO:0043566;structure-specific DNA binding;0.000180836570720609!GO:0009719;response to endogenous stimulus;0.000193488233099285!GO:0008092;cytoskeletal protein binding;0.000195775232496927!GO:0004576;oligosaccharyl transferase activity;0.000209682506240049!GO:0003724;RNA helicase activity;0.000221137633328862!GO:0030663;COPI coated vesicle membrane;0.000242531517475986!GO:0030126;COPI vesicle coat;0.000242531517475986!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000245479003607572!GO:0016563;transcription activator activity;0.000264146191098672!GO:0044262;cellular carbohydrate metabolic process;0.000270658108457649!GO:0006281;DNA repair;0.000275135911028806!GO:0040008;regulation of growth;0.000306353048196028!GO:0005885;Arp2/3 protein complex;0.000311336943442194!GO:0008250;oligosaccharyl transferase complex;0.000322011074994288!GO:0016481;negative regulation of transcription;0.000337839721523462!GO:0003713;transcription coactivator activity;0.000352493628852757!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00036102856350449!GO:0008610;lipid biosynthetic process;0.000395160768899453!GO:0004298;threonine endopeptidase activity;0.00040749297250016!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00044951452467012!GO:0030137;COPI-coated vesicle;0.000471820758883088!GO:0043623;cellular protein complex assembly;0.000507056527445319!GO:0022402;cell cycle process;0.000514473101330654!GO:0006891;intra-Golgi vesicle-mediated transport;0.000587073127921837!GO:0030176;integral to endoplasmic reticulum membrane;0.000605283659256643!GO:0043021;ribonucleoprotein binding;0.000651455717521853!GO:0005741;mitochondrial outer membrane;0.000723237341110326!GO:0006650;glycerophospholipid metabolic process;0.000729679386527342!GO:0046489;phosphoinositide biosynthetic process;0.000730024082771701!GO:0016568;chromatin modification;0.000780017963582863!GO:0018196;peptidyl-asparagine modification;0.00080229635901906!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00080229635901906!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00081408538368362!GO:0005769;early endosome;0.000877494573936115!GO:0046467;membrane lipid biosynthetic process;0.000887844601423766!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00102221750168575!GO:0043284;biopolymer biosynthetic process;0.00102410622728444!GO:0051427;hormone receptor binding;0.00105921923894654!GO:0048471;perinuclear region of cytoplasm;0.00110607933149271!GO:0031072;heat shock protein binding;0.00113552164827155!GO:0051920;peroxiredoxin activity;0.00116094152361417!GO:0030027;lamellipodium;0.00129239743283254!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0013979682894795!GO:0015399;primary active transmembrane transporter activity;0.0013979682894795!GO:0000314;organellar small ribosomal subunit;0.00140803836629227!GO:0005763;mitochondrial small ribosomal subunit;0.00140803836629227!GO:0007050;cell cycle arrest;0.00143348321269097!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00146624375159268!GO:0051028;mRNA transport;0.00146817479378594!GO:0016779;nucleotidyltransferase activity;0.00149322304413598!GO:0007264;small GTPase mediated signal transduction;0.00164721683877072!GO:0030658;transport vesicle membrane;0.00164721683877072!GO:0043681;protein import into mitochondrion;0.00169810926822592!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00170922861348024!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00175750829803956!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00184269571672537!GO:0035257;nuclear hormone receptor binding;0.00191037086759289!GO:0006839;mitochondrial transport;0.00197111140719852!GO:0016126;sterol biosynthetic process;0.00218948897182967!GO:0003899;DNA-directed RNA polymerase activity;0.00219129687621976!GO:0045045;secretory pathway;0.00222424890081453!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00225152173411038!GO:0001726;ruffle;0.00228108092141038!GO:0007006;mitochondrial membrane organization and biogenesis;0.00236469537191579!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00246209244002874!GO:0008186;RNA-dependent ATPase activity;0.00249495287524416!GO:0006383;transcription from RNA polymerase III promoter;0.00255011616657528!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00255162913964959!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00255162913964959!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00255162913964959!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00260320130594755!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00268367270237326!GO:0007243;protein kinase cascade;0.00269684740094406!GO:0016197;endosome transport;0.00271854358618159!GO:0006414;translational elongation;0.00271957160881336!GO:0048522;positive regulation of cellular process;0.00281809771754738!GO:0048500;signal recognition particle;0.00293763054057251!GO:0006979;response to oxidative stress;0.00302578346954963!GO:0004177;aminopeptidase activity;0.00307958634663739!GO:0006626;protein targeting to mitochondrion;0.00307958634663739!GO:0007040;lysosome organization and biogenesis;0.00313269631791721!GO:0048487;beta-tubulin binding;0.00324851646417621!GO:0006892;post-Golgi vesicle-mediated transport;0.00325208260276423!GO:0006323;DNA packaging;0.00336553988964121!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00337515826884434!GO:0015992;proton transport;0.00344195695202919!GO:0006818;hydrogen transport;0.00352732453590416!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00362402865281122!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00362402865281122!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00370390905871625!GO:0006497;protein amino acid lipidation;0.00380384379848088!GO:0030134;ER to Golgi transport vesicle;0.00383474733205691!GO:0030132;clathrin coat of coated pit;0.00392454234792452!GO:0006260;DNA replication;0.00394956484850891!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00396090498004456!GO:0030127;COPII vesicle coat;0.0039735525215399!GO:0012507;ER to Golgi transport vesicle membrane;0.0039735525215399!GO:0019899;enzyme binding;0.00417263908156887!GO:0030384;phosphoinositide metabolic process;0.00419195215005133!GO:0006509;membrane protein ectodomain proteolysis;0.00429622563480299!GO:0033619;membrane protein proteolysis;0.00429622563480299!GO:0051252;regulation of RNA metabolic process;0.0043408817492905!GO:0030118;clathrin coat;0.00444812171368166!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00456521695082876!GO:0030659;cytoplasmic vesicle membrane;0.00471179048049648!GO:0022890;inorganic cation transmembrane transporter activity;0.00487061659061342!GO:0030660;Golgi-associated vesicle membrane;0.00505391428380658!GO:0007010;cytoskeleton organization and biogenesis;0.00516206171901792!GO:0051168;nuclear export;0.0052998926005174!GO:0045792;negative regulation of cell size;0.00549521454882843!GO:0004004;ATP-dependent RNA helicase activity;0.00587358686970594!GO:0019222;regulation of metabolic process;0.0060266143148336!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00610883436591906!GO:0045047;protein targeting to ER;0.00610883436591906!GO:0043488;regulation of mRNA stability;0.00622496298419613!GO:0043487;regulation of RNA stability;0.00622496298419613!GO:0017166;vinculin binding;0.00644676771139537!GO:0030308;negative regulation of cell growth;0.00647350133893796!GO:0030880;RNA polymerase complex;0.00650696581169644!GO:0009165;nucleotide biosynthetic process;0.00665170576209563!GO:0007033;vacuole organization and biogenesis;0.00684880881556524!GO:0043492;ATPase activity, coupled to movement of substances;0.00716101607468972!GO:0000059;protein import into nucleus, docking;0.00741319002686936!GO:0003729;mRNA binding;0.00752431274261479!GO:0033673;negative regulation of kinase activity;0.00753906371814445!GO:0006469;negative regulation of protein kinase activity;0.00753906371814445!GO:0005774;vacuolar membrane;0.00755888470117834!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00760394968239179!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00787518255003523!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00787518255003523!GO:0006643;membrane lipid metabolic process;0.00795221887736656!GO:0019752;carboxylic acid metabolic process;0.00805681380167866!GO:0005869;dynactin complex;0.00833186311287551!GO:0065007;biological regulation;0.00835570590956356!GO:0003746;translation elongation factor activity;0.00840598582685372!GO:0000049;tRNA binding;0.00840717037757575!GO:0006506;GPI anchor biosynthetic process;0.00851661227428219!GO:0042158;lipoprotein biosynthetic process;0.00852438738902336!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00852438738902336!GO:0015002;heme-copper terminal oxidase activity;0.00852438738902336!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00852438738902336!GO:0004129;cytochrome-c oxidase activity;0.00852438738902336!GO:0003779;actin binding;0.00858205940939345!GO:0006082;organic acid metabolic process;0.00862011617560063!GO:0044433;cytoplasmic vesicle part;0.0086733503302168!GO:0051348;negative regulation of transferase activity;0.00868499670714046!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00869293151195509!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0087361194789578!GO:0008180;signalosome;0.0087800179851181!GO:0003711;transcription elongation regulator activity;0.00881829285925431!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00888816763588127!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00897898480298004!GO:0008139;nuclear localization sequence binding;0.00960695951477481!GO:0006352;transcription initiation;0.00977942177780877!GO:0045892;negative regulation of transcription, DNA-dependent;0.00978147271656772!GO:0001527;microfibril;0.00982218731668878!GO:0050811;GABA receptor binding;0.00984903143273555!GO:0043433;negative regulation of transcription factor activity;0.00990078761437601!GO:0008312;7S RNA binding;0.00992733503357745!GO:0007030;Golgi organization and biogenesis;0.0100881345637664!GO:0006695;cholesterol biosynthetic process;0.0101685166004644!GO:0030521;androgen receptor signaling pathway;0.0102388392302655!GO:0065004;protein-DNA complex assembly;0.0103453238218334!GO:0006505;GPI anchor metabolic process;0.0103760192905307!GO:0051087;chaperone binding;0.0106381199989775!GO:0035258;steroid hormone receptor binding;0.0108113736561384!GO:0031418;L-ascorbic acid binding;0.0108323122934216!GO:0006354;RNA elongation;0.0109950055103774!GO:0065009;regulation of a molecular function;0.0113397773949553!GO:0012506;vesicle membrane;0.0115442218768493!GO:0006595;polyamine metabolic process;0.0115839580258573!GO:0031901;early endosome membrane;0.0121962886161898!GO:0006402;mRNA catabolic process;0.0122174090905917!GO:0051128;regulation of cellular component organization and biogenesis;0.0123240677746366!GO:0008033;tRNA processing;0.012353817579227!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0124324980406643!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0124970134663057!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0126646237535923!GO:0000428;DNA-directed RNA polymerase complex;0.0126646237535923!GO:0030145;manganese ion binding;0.0136614549454956!GO:0006897;endocytosis;0.0139751854937422!GO:0010324;membrane invagination;0.0139751854937422!GO:0005862;muscle thin filament tropomyosin;0.0141633751140901!GO:0016860;intramolecular oxidoreductase activity;0.0142198271114852!GO:0032940;secretion by cell;0.0144038268435816!GO:0006644;phospholipid metabolic process;0.015457402393906!GO:0030041;actin filament polymerization;0.0155169032278209!GO:0007034;vacuolar transport;0.015765550179394!GO:0006790;sulfur metabolic process;0.0158029406223595!GO:0030503;regulation of cell redox homeostasis;0.0162538108963988!GO:0051329;interphase of mitotic cell cycle;0.0164474981811063!GO:0030833;regulation of actin filament polymerization;0.0169310440035141!GO:0005801;cis-Golgi network;0.0169725197168579!GO:0016272;prefoldin complex;0.0170935904056507!GO:0006984;ER-nuclear signaling pathway;0.0173398755948467!GO:0031543;peptidyl-proline dioxygenase activity;0.0173630607289908!GO:0046483;heterocycle metabolic process;0.017606540913013!GO:0005581;collagen;0.0176397636201149!GO:0005583;fibrillar collagen;0.0177537968306565!GO:0030518;steroid hormone receptor signaling pathway;0.0177745427064016!GO:0051325;interphase;0.017903651639816!GO:0046519;sphingoid metabolic process;0.0181508023017568!GO:0044437;vacuolar part;0.0185568193201831!GO:0031902;late endosome membrane;0.0187966053922131!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0188601895975215!GO:0016363;nuclear matrix;0.0193109019685083!GO:0048144;fibroblast proliferation;0.0193256459843465!GO:0048145;regulation of fibroblast proliferation;0.0193256459843465!GO:0030125;clathrin vesicle coat;0.0193608695410572!GO:0030665;clathrin coated vesicle membrane;0.0193608695410572!GO:0016408;C-acyltransferase activity;0.0202194360241143!GO:0030433;ER-associated protein catabolic process;0.0208330024654105!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0208330024654105!GO:0019798;procollagen-proline dioxygenase activity;0.0208664320119774!GO:0045936;negative regulation of phosphate metabolic process;0.0209156699978675!GO:0000209;protein polyubiquitination;0.0213507960530134!GO:0005684;U2-dependent spliceosome;0.0214356138481052!GO:0033559;unsaturated fatty acid metabolic process;0.0216004553374667!GO:0006636;unsaturated fatty acid biosynthetic process;0.0216004553374667!GO:0000339;RNA cap binding;0.0217781118516561!GO:0005765;lysosomal membrane;0.0217909705572519!GO:0015631;tubulin binding;0.0225331660300598!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0225331660300598!GO:0005595;collagen type XII;0.02273326270639!GO:0003690;double-stranded DNA binding;0.0227847433983834!GO:0009967;positive regulation of signal transduction;0.0228390843196822!GO:0044452;nucleolar part;0.0229594434215945!GO:0048468;cell development;0.0230722988664682!GO:0051276;chromosome organization and biogenesis;0.0234009856535827!GO:0045926;negative regulation of growth;0.0235665600632825!GO:0005832;chaperonin-containing T-complex;0.0237347339222321!GO:0005813;centrosome;0.0237798242600499!GO:0030119;AP-type membrane coat adaptor complex;0.0242949380728718!GO:0000096;sulfur amino acid metabolic process;0.0245786845055728!GO:0005586;collagen type III;0.0248383265830882!GO:0044420;extracellular matrix part;0.0251729032599709!GO:0015630;microtubule cytoskeleton;0.0252057257689832!GO:0008147;structural constituent of bone;0.0255316171538332!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0258254689999595!GO:0000287;magnesium ion binding;0.026620001258994!GO:0006740;NADPH regeneration;0.0269043822699097!GO:0006098;pentose-phosphate shunt;0.0269043822699097!GO:0043022;ribosome binding;0.0270372485665305!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0274773697411117!GO:0006778;porphyrin metabolic process;0.0277219981701558!GO:0033013;tetrapyrrole metabolic process;0.0277219981701558!GO:0051287;NAD binding;0.0280767569141002!GO:0035035;histone acetyltransferase binding;0.0280767569141002!GO:0031529;ruffle organization and biogenesis;0.0283932516528807!GO:0007041;lysosomal transport;0.0301092748404264!GO:0006607;NLS-bearing substrate import into nucleus;0.0302666473070954!GO:0005815;microtubule organizing center;0.0303748029616994!GO:0048146;positive regulation of fibroblast proliferation;0.0305868271671577!GO:0009112;nucleobase metabolic process;0.0305868271671577!GO:0000278;mitotic cell cycle;0.0315309023117618!GO:0006672;ceramide metabolic process;0.0315965720368794!GO:0051101;regulation of DNA binding;0.0330529055680558!GO:0008022;protein C-terminus binding;0.0344859308309178!GO:0043086;negative regulation of catalytic activity;0.0345638777872634!GO:0008652;amino acid biosynthetic process;0.0358713697476899!GO:0022408;negative regulation of cell-cell adhesion;0.0364532883230934!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0369975743423419!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0369975743423419!GO:0031301;integral to organelle membrane;0.0370883220697708!GO:0000030;mannosyltransferase activity;0.0376351553974555!GO:0048518;positive regulation of biological process;0.0376351553974555!GO:0042802;identical protein binding;0.0381364115125933!GO:0031371;ubiquitin conjugating enzyme complex;0.0387551690524117!GO:0000902;cell morphogenesis;0.038768211114215!GO:0032989;cellular structure morphogenesis;0.038768211114215!GO:0006368;RNA elongation from RNA polymerase II promoter;0.038768211114215!GO:0007160;cell-matrix adhesion;0.0391347056284529!GO:0030131;clathrin adaptor complex;0.040230500487223!GO:0003756;protein disulfide isomerase activity;0.0404293493157047!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0404293493157047!GO:0001516;prostaglandin biosynthetic process;0.0408977652851335!GO:0046457;prostanoid biosynthetic process;0.0408977652851335!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0410150448099009!GO:0008287;protein serine/threonine phosphatase complex;0.0411442024594594!GO:0001872;zymosan binding;0.0411442024594594!GO:0001878;response to yeast;0.0411442024594594!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0413434478979326!GO:0031589;cell-substrate adhesion;0.0414685148948701!GO:0030140;trans-Golgi network transport vesicle;0.041828231159341!GO:0006401;RNA catabolic process;0.04206007231667!GO:0000082;G1/S transition of mitotic cell cycle;0.0427023884923334!GO:0006289;nucleotide-excision repair;0.0427023884923334!GO:0050681;androgen receptor binding;0.0427874011773731!GO:0005520;insulin-like growth factor binding;0.0428787068131023!GO:0016251;general RNA polymerase II transcription factor activity;0.0429421463498956!GO:0006611;protein export from nucleus;0.0429836005054605!GO:0030508;thiol-disulfide exchange intermediate activity;0.0432347205158732!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0432347205158732!GO:0006417;regulation of translation;0.0433836826361333!GO:0030911;TPR domain binding;0.0433836826361333!GO:0042326;negative regulation of phosphorylation;0.0434170067287482!GO:0008154;actin polymerization and/or depolymerization;0.0440351679201364!GO:0007021;tubulin folding;0.0453669984398527!GO:0003923;GPI-anchor transamidase activity;0.0457772716631235!GO:0016255;attachment of GPI anchor to protein;0.0457772716631235!GO:0042765;GPI-anchor transamidase complex;0.0457772716631235!GO:0004722;protein serine/threonine phosphatase activity;0.045791698043879!GO:0006518;peptide metabolic process;0.0460311567268335!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0467608625442881!GO:0051235;maintenance of localization;0.0471639684566793!GO:0006779;porphyrin biosynthetic process;0.0474849741846004!GO:0033014;tetrapyrrole biosynthetic process;0.0474849741846004!GO:0008286;insulin receptor signaling pathway;0.0489821941210468!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0489968673860077!GO:0051098;regulation of binding;0.0497668656257767 | |||
|sample_id=11403 | |sample_id=11403 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=omentum | |sample_tissue=omentum | ||
|top_motifs=XBP1:2.3262441576;UFEwm:2.30924075087;NKX2-2,8:2.13791455878;HOX{A5,B5}:2.10002597686;HMGA1,2:2.00892235205;TEF:1.95266848537;HES1:1.94942214339;TAL1_TCF{3,4,12}:1.85828291313;EVI1:1.83720247056;GLI1..3:1.82384484982;ESR1:1.78967256406;FOXL1:1.75784958966;RXRA_VDR{dimer}:1.65776019159;NKX3-1:1.65534405573;NFE2L1:1.56964099266;MAFB:1.50775101515;ZNF384:1.4951655917;TEAD1:1.47429084901;PAX1,9:1.47071112897;MYBL2:1.36513460449;SRF:1.3014432552;ALX4:1.26938600947;NR3C1:1.24753035115;IKZF1:1.22014711287;GZF1:1.1948695475;MTE{core}:1.19214504811;NFATC1..3:1.15985874597;RXR{A,B,G}:1.14614236796;GCM1,2:1.12377464592;TBX4,5:1.11311805615;ATF6:1.11089905848;HMX1:1.10669763456;KLF4:1.10616314585;TP53:1.10498749687;EN1,2:1.1025735588;ZNF423:1.09262961982;HIF1A:1.09102604716;GATA4:1.03622932331;TFAP4:0.999589543902;NR6A1:0.99492089808;AIRE:0.970389331273;HOX{A6,A7,B6,B7}:0.959928517931;TFAP2B:0.9435417106;DBP:0.918529288132;FOXA2:0.893517961785;HOX{A4,D4}:0.820793717325;ARID5B:0.812438982031;SMAD1..7,9:0.804714699137;POU6F1:0.801488892352;HSF1,2:0.77361819635;NKX2-1,4:0.773297949342;HIC1:0.742550603855;HLF:0.741215845326;EBF1:0.737959730163;MAZ:0.704524785559;GTF2A1,2:0.689560751188;TLX1..3_NFIC{dimer}:0.663065941008;LHX3,4:0.611862490466;ZNF148:0.555797550045;PAX4:0.530775035683;HAND1,2:0.527250411013;GTF2I:0.5144786405;SPZ1:0.510029809885;NFIX:0.487460446919;TFAP2{A,C}:0.480083538845;NANOG{mouse}:0.474915356201;ZNF238:0.441159650554;TOPORS:0.436084145382;ZBTB16:0.424696624999;SOX17:0.378132459867;PRDM1:0.362721052423;PATZ1:0.339612634566;FOXO1,3,4:0.332020842313;ZIC1..3:0.300934505017;XCPE1{core}:0.291792080199;MZF1:0.286018033498;GFI1B:0.270417714502;TFCP2:0.267994512528;NHLH1,2:0.259265910248;NKX3-2:0.244402314094;ONECUT1,2:0.240033487978;ZBTB6:0.216764639227;HOXA9_MEIS1:0.210564358694;EGR1..3:0.205922816758;bHLH_family:0.202611069194;PAX5:0.152235098858;SOX5:0.151311123784;ADNP_IRX_SIX_ZHX:0.145456307537;REST:0.14338229804;POU3F1..4:0.126173057738;MTF1:0.118369348188;ELK1,4_GABP{A,B1}:0.0825864778317;CDC5L:0.0684711632145;MYFfamily:0.0559556652332;AR:0.0553094553005;MYB:0.0241295956748;RREB1:0.0144223529341;NFE2L2:0.0100195618013;MEF2{A,B,C,D}:0.00617915570103;TBP:-0.00397378983435;PPARG:-0.00960236044254;CEBPA,B_DDIT3:-0.00984266558613;PITX1..3:-0.0217085995011;CREB1:-0.0262139338753;AHR_ARNT_ARNT2:-0.0278877864838;PAX8:-0.0613721066674;ZFP161:-0.0701943055959;BACH2:-0.0727838469948;IKZF2:-0.0860448051772;STAT5{A,B}:-0.0978037358425;HNF1A:-0.105908623663;MED-1{core}:-0.155458518547;POU5F1:-0.170015208543;STAT2,4,6:-0.188925886613;ZNF143:-0.204132001956;SREBF1,2:-0.218828107977;TFDP1:-0.223777174975;SOX2:-0.242633979395;FOX{D1,D2}:-0.2527010257;FOX{I1,J2}:-0.258536225484;FOXP3:-0.269376632593;EP300:-0.273223141349;STAT1,3:-0.27849129045;PAX6:-0.290612121568;NRF1:-0.304461378606;NFIL3:-0.308991190138;CRX:-0.317059566239;TGIF1:-0.329932534188;NKX6-1,2:-0.340893170086;FOS_FOS{B,L1}_JUN{B,D}:-0.357910068067;RFX1:-0.391663308566;IRF1,2:-0.423801129009;YY1:-0.450563222994;PAX3,7:-0.45089539951;HBP1_HMGB_SSRP1_UBTF:-0.454696484021;FOSL2:-0.472139706927;FOXN1:-0.485680106611;ATF5_CREB3:-0.491908922544;PAX2:-0.494036562866;SP1:-0.496874397164;FOXM1:-0.497280273775;ESRRA:-0.506237976639;OCT4_SOX2{dimer}:-0.509944176243;HNF4A_NR2F1,2:-0.533865328356;RUNX1..3:-0.55440517475;JUN:-0.555907625935;SPI1:-0.563646626233;NFE2:-0.594698667005;ATF4:-0.597143864337;ATF2:-0.607290367736;NFKB1_REL_RELA:-0.614657624088;FOXP1:-0.628026575315;ETS1,2:-0.629410696867;BPTF:-0.64921626679;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.659341757867;SNAI1..3:-0.684698426905;TLX2:-0.687217597049;ELF1,2,4:-0.692442788849;GATA6:-0.69567219994;LMO2:-0.697102518738;DMAP1_NCOR{1,2}_SMARC:-0.714682307665;SPIB:-0.776990835001;BREu{core}:-0.790979798967;ALX1:-0.822608361281;IRF7:-0.858700679198;SOX{8,9,10}:-0.901133812847;ZEB1:-0.907892625339;PRRX1,2:-0.92977777896;FOX{F1,F2,J1}:-0.935275127107;T:-0.979215838079;FOXQ1:-1.04276317199;NR5A1,2:-1.04356475657;LEF1_TCF7_TCF7L1,2:-1.04711419571;POU1F1:-1.05824922924;VSX1,2:-1.06852063967;NR1H4:-1.10776317275;RFX2..5_RFXANK_RFXAP:-1.11306109923;MYOD1:-1.14547608669;CUX2:-1.14990610413;GFI1:-1.15221636177;E2F1..5:-1.1788446564;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.19611268147;NKX2-3_NKX2-5:-1.25790060315;NFY{A,B,C}:-1.29657961934;FOXD3:-1.33129547846;NANOG:-1.47053166956;CDX1,2,4:-1.55651363434;RORA:-1.5599123274;PBX1:-1.87577131349;PDX1:-2.18044537467;RBPJ:-2.27486067639;POU2F1..3:-2.45487521993 | |top_motifs=XBP1:2.3262441576;UFEwm:2.30924075087;NKX2-2,8:2.13791455878;HOX{A5,B5}:2.10002597686;HMGA1,2:2.00892235205;TEF:1.95266848537;HES1:1.94942214339;TAL1_TCF{3,4,12}:1.85828291313;EVI1:1.83720247056;GLI1..3:1.82384484982;ESR1:1.78967256406;FOXL1:1.75784958966;RXRA_VDR{dimer}:1.65776019159;NKX3-1:1.65534405573;NFE2L1:1.56964099266;MAFB:1.50775101515;ZNF384:1.4951655917;TEAD1:1.47429084901;PAX1,9:1.47071112897;MYBL2:1.36513460449;SRF:1.3014432552;ALX4:1.26938600947;NR3C1:1.24753035115;IKZF1:1.22014711287;GZF1:1.1948695475;MTE{core}:1.19214504811;NFATC1..3:1.15985874597;RXR{A,B,G}:1.14614236796;GCM1,2:1.12377464592;TBX4,5:1.11311805615;ATF6:1.11089905848;HMX1:1.10669763456;KLF4:1.10616314585;TP53:1.10498749687;EN1,2:1.1025735588;ZNF423:1.09262961982;HIF1A:1.09102604716;GATA4:1.03622932331;TFAP4:0.999589543902;NR6A1:0.99492089808;AIRE:0.970389331273;HOX{A6,A7,B6,B7}:0.959928517931;TFAP2B:0.9435417106;DBP:0.918529288132;FOXA2:0.893517961785;HOX{A4,D4}:0.820793717325;ARID5B:0.812438982031;SMAD1..7,9:0.804714699137;POU6F1:0.801488892352;HSF1,2:0.77361819635;NKX2-1,4:0.773297949342;HIC1:0.742550603855;HLF:0.741215845326;EBF1:0.737959730163;MAZ:0.704524785559;GTF2A1,2:0.689560751188;TLX1..3_NFIC{dimer}:0.663065941008;LHX3,4:0.611862490466;ZNF148:0.555797550045;PAX4:0.530775035683;HAND1,2:0.527250411013;GTF2I:0.5144786405;SPZ1:0.510029809885;NFIX:0.487460446919;TFAP2{A,C}:0.480083538845;NANOG{mouse}:0.474915356201;ZNF238:0.441159650554;TOPORS:0.436084145382;ZBTB16:0.424696624999;SOX17:0.378132459867;PRDM1:0.362721052423;PATZ1:0.339612634566;FOXO1,3,4:0.332020842313;ZIC1..3:0.300934505017;XCPE1{core}:0.291792080199;MZF1:0.286018033498;GFI1B:0.270417714502;TFCP2:0.267994512528;NHLH1,2:0.259265910248;NKX3-2:0.244402314094;ONECUT1,2:0.240033487978;ZBTB6:0.216764639227;HOXA9_MEIS1:0.210564358694;EGR1..3:0.205922816758;bHLH_family:0.202611069194;PAX5:0.152235098858;SOX5:0.151311123784;ADNP_IRX_SIX_ZHX:0.145456307537;REST:0.14338229804;POU3F1..4:0.126173057738;MTF1:0.118369348188;ELK1,4_GABP{A,B1}:0.0825864778317;CDC5L:0.0684711632145;MYFfamily:0.0559556652332;AR:0.0553094553005;MYB:0.0241295956748;RREB1:0.0144223529341;NFE2L2:0.0100195618013;MEF2{A,B,C,D}:0.00617915570103;TBP:-0.00397378983435;PPARG:-0.00960236044254;CEBPA,B_DDIT3:-0.00984266558613;PITX1..3:-0.0217085995011;CREB1:-0.0262139338753;AHR_ARNT_ARNT2:-0.0278877864838;PAX8:-0.0613721066674;ZFP161:-0.0701943055959;BACH2:-0.0727838469948;IKZF2:-0.0860448051772;STAT5{A,B}:-0.0978037358425;HNF1A:-0.105908623663;MED-1{core}:-0.155458518547;POU5F1:-0.170015208543;STAT2,4,6:-0.188925886613;ZNF143:-0.204132001956;SREBF1,2:-0.218828107977;TFDP1:-0.223777174975;SOX2:-0.242633979395;FOX{D1,D2}:-0.2527010257;FOX{I1,J2}:-0.258536225484;FOXP3:-0.269376632593;EP300:-0.273223141349;STAT1,3:-0.27849129045;PAX6:-0.290612121568;NRF1:-0.304461378606;NFIL3:-0.308991190138;CRX:-0.317059566239;TGIF1:-0.329932534188;NKX6-1,2:-0.340893170086;FOS_FOS{B,L1}_JUN{B,D}:-0.357910068067;RFX1:-0.391663308566;IRF1,2:-0.423801129009;YY1:-0.450563222994;PAX3,7:-0.45089539951;HBP1_HMGB_SSRP1_UBTF:-0.454696484021;FOSL2:-0.472139706927;FOXN1:-0.485680106611;ATF5_CREB3:-0.491908922544;PAX2:-0.494036562866;SP1:-0.496874397164;FOXM1:-0.497280273775;ESRRA:-0.506237976639;OCT4_SOX2{dimer}:-0.509944176243;HNF4A_NR2F1,2:-0.533865328356;RUNX1..3:-0.55440517475;JUN:-0.555907625935;SPI1:-0.563646626233;NFE2:-0.594698667005;ATF4:-0.597143864337;ATF2:-0.607290367736;NFKB1_REL_RELA:-0.614657624088;FOXP1:-0.628026575315;ETS1,2:-0.629410696867;BPTF:-0.64921626679;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.659341757867;SNAI1..3:-0.684698426905;TLX2:-0.687217597049;ELF1,2,4:-0.692442788849;GATA6:-0.69567219994;LMO2:-0.697102518738;DMAP1_NCOR{1,2}_SMARC:-0.714682307665;SPIB:-0.776990835001;BREu{core}:-0.790979798967;ALX1:-0.822608361281;IRF7:-0.858700679198;SOX{8,9,10}:-0.901133812847;ZEB1:-0.907892625339;PRRX1,2:-0.92977777896;FOX{F1,F2,J1}:-0.935275127107;T:-0.979215838079;FOXQ1:-1.04276317199;NR5A1,2:-1.04356475657;LEF1_TCF7_TCF7L1,2:-1.04711419571;POU1F1:-1.05824922924;VSX1,2:-1.06852063967;NR1H4:-1.10776317275;RFX2..5_RFXANK_RFXAP:-1.11306109923;MYOD1:-1.14547608669;CUX2:-1.14990610413;GFI1:-1.15221636177;E2F1..5:-1.1788446564;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.19611268147;NKX2-3_NKX2-5:-1.25790060315;NFY{A,B,C}:-1.29657961934;FOXD3:-1.33129547846;NANOG:-1.47053166956;CDX1,2,4:-1.55651363434;RORA:-1.5599123274;PBX1:-1.87577131349;PDX1:-2.18044537467;RBPJ:-2.27486067639;POU2F1..3:-2.45487521993 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11403-118D8;search_select_hide=table117:FF:11403-118D8 | |||
}} | }} | ||
Latest revision as of 17:58, 4 June 2020
| Name: | Preadipocyte - omental, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12013 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12013
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12013
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.787 |
| 10 | 10 | 0.902 |
| 100 | 100 | 0.994 |
| 101 | 101 | 0.39 |
| 102 | 102 | 0.141 |
| 103 | 103 | 0.802 |
| 104 | 104 | 0.863 |
| 105 | 105 | 0.0111 |
| 106 | 106 | 0.194 |
| 107 | 107 | 0.246 |
| 108 | 108 | 0.189 |
| 109 | 109 | 0.948 |
| 11 | 11 | 0.721 |
| 110 | 110 | 0.635 |
| 111 | 111 | 0.632 |
| 112 | 112 | 0.602 |
| 113 | 113 | 0.509 |
| 114 | 114 | 0.142 |
| 115 | 115 | 0.0102 |
| 116 | 116 | 0.0218 |
| 117 | 117 | 0.73 |
| 118 | 118 | 0.285 |
| 119 | 119 | 0.672 |
| 12 | 12 | 0.562 |
| 120 | 120 | 0.677 |
| 121 | 121 | 0.419 |
| 122 | 122 | 0.244 |
| 123 | 123 | 0.0579 |
| 124 | 124 | 0.239 |
| 125 | 125 | 0.766 |
| 126 | 126 | 0.287 |
| 127 | 127 | 0.289 |
| 128 | 128 | 0.362 |
| 129 | 129 | 0.622 |
| 13 | 13 | 0.39 |
| 130 | 130 | 0.335 |
| 131 | 131 | 0.675 |
| 132 | 132 | 0.524 |
| 133 | 133 | 0.722 |
| 134 | 134 | 0.736 |
| 135 | 135 | 0.795 |
| 136 | 136 | 0.423 |
| 137 | 137 | 0.536 |
| 138 | 138 | 0.953 |
| 139 | 139 | 0.0708 |
| 14 | 14 | 0.163 |
| 140 | 140 | 0.361 |
| 141 | 141 | 0.618 |
| 142 | 142 | 0.645 |
| 143 | 143 | 0.658 |
| 144 | 144 | 0.48 |
| 145 | 145 | 0.337 |
| 146 | 146 | 0.309 |
| 147 | 147 | 0.0985 |
| 148 | 148 | 0.765 |
| 149 | 149 | 0.00262 |
| 15 | 15 | 0.734 |
| 150 | 150 | 0.414 |
| 151 | 151 | 0.82 |
| 152 | 152 | 0.0182 |
| 153 | 153 | 0.608 |
| 154 | 154 | 0.68 |
| 155 | 155 | 0.0107 |
| 156 | 156 | 0.57 |
| 157 | 157 | 0.48 |
| 158 | 158 | 0.0539 |
| 159 | 159 | 0.816 |
| 16 | 16 | 0.0234 |
| 160 | 160 | 0.747 |
| 161 | 161 | 0.403 |
| 162 | 162 | 0.925 |
| 163 | 163 | 0.328 |
| 164 | 164 | 0.052 |
| 165 | 165 | 0.708 |
| 166 | 166 | 0.0781 |
| 167 | 167 | 0.916 |
| 168 | 168 | 0.723 |
| 169 | 169 | 0.197 |
| 17 | 17 | 0.595 |
| 18 | 18 | 0.156 |
| 19 | 19 | 0.0219 |
| 2 | 2 | 0.446 |
| 20 | 20 | 0.571 |
| 21 | 21 | 0.461 |
| 22 | 22 | 0.607 |
| 23 | 23 | 0.388 |
| 24 | 24 | 0.0913 |
| 25 | 25 | 0.224 |
| 26 | 26 | 0.885 |
| 27 | 27 | 0.854 |
| 28 | 28 | 0.177 |
| 29 | 29 | 0.881 |
| 3 | 3 | 0.771 |
| 30 | 30 | 0.846 |
| 31 | 31 | 0.618 |
| 32 | 32 | 4.34948e-17 |
| 33 | 33 | 0.594 |
| 34 | 34 | 0.853 |
| 35 | 35 | 0.924 |
| 36 | 36 | 0.0112 |
| 37 | 37 | 0.147 |
| 38 | 38 | 0.37 |
| 39 | 39 | 0.38 |
| 4 | 4 | 0.87 |
| 40 | 40 | 0.139 |
| 41 | 41 | 0.54 |
| 42 | 42 | 0.364 |
| 43 | 43 | 0.967 |
| 44 | 44 | 0.382 |
| 45 | 45 | 0.612 |
| 46 | 46 | 0.97 |
| 47 | 47 | 0.962 |
| 48 | 48 | 0.737 |
| 49 | 49 | 0.671 |
| 5 | 5 | 0.69 |
| 50 | 50 | 0.901 |
| 51 | 51 | 0.637 |
| 52 | 52 | 0.83 |
| 53 | 53 | 0.0895 |
| 54 | 54 | 0.716 |
| 55 | 55 | 0.128 |
| 56 | 56 | 0.488 |
| 57 | 57 | 0.845 |
| 58 | 58 | 0.187 |
| 59 | 59 | 0.511 |
| 6 | 6 | 0.367 |
| 60 | 60 | 0.989 |
| 61 | 61 | 0.515 |
| 62 | 62 | 0.53 |
| 63 | 63 | 0.614 |
| 64 | 64 | 0.331 |
| 65 | 65 | 0.749 |
| 66 | 66 | 0.101 |
| 67 | 67 | 0.251 |
| 68 | 68 | 0.446 |
| 69 | 69 | 0.743 |
| 7 | 7 | 0.197 |
| 70 | 70 | 0.544 |
| 71 | 71 | 0.899 |
| 72 | 72 | 0.527 |
| 73 | 73 | 0.00421 |
| 74 | 74 | 0.285 |
| 75 | 75 | 0.701 |
| 76 | 76 | 0.809 |
| 77 | 77 | 0.0782 |
| 78 | 78 | 0.37 |
| 79 | 79 | 0.00423 |
| 8 | 8 | 0.365 |
| 80 | 80 | 0.0959 |
| 81 | 81 | 0.599 |
| 82 | 82 | 0.383 |
| 83 | 83 | 0.232 |
| 84 | 84 | 0.319 |
| 85 | 85 | 0.0548 |
| 86 | 86 | 0.413 |
| 87 | 87 | 0.409 |
| 88 | 88 | 0.998 |
| 89 | 89 | 0.174 |
| 9 | 9 | 0.828 |
| 90 | 90 | 0.911 |
| 91 | 91 | 0.993 |
| 92 | 92 | 0.133 |
| 93 | 93 | 0.468 |
| 94 | 94 | 0.894 |
| 95 | 95 | 0.702 |
| 96 | 96 | 0.776 |
| 97 | 97 | 0.424 |
| 98 | 98 | 0.496 |
| 99 | 99 | 0.124 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12013
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002579 (omentum preadipocyte)
UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000140 (human omentum preadipocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
