FF:11404-118D9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005276 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005276 | ||
|accession_numbers=CAGE;DRX008421;DRR009293;DRZ000718;DRZ002103;DRZ012068;DRZ013453 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037232;DRR041598;DRZ007240 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002367,UBERON:0005156,UBERON:0004119,UBERON:0000062,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002530,UBERON:0010147,UBERON:0010317,UBERON:0003937,UBERON:0005399,UBERON:0003101,UBERON:0000079 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:0002076,CL:0002231 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000145 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Prostate%2520Epithelial%2520Cells%252c%2520donor3.CNhs12014.11404-118D9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Prostate%2520Epithelial%2520Cells%252c%2520donor3.CNhs12014.11404-118D9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Prostate%2520Epithelial%2520Cells%252c%2520donor3.CNhs12014.11404-118D9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Prostate%2520Epithelial%2520Cells%252c%2520donor3.CNhs12014.11404-118D9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Prostate%2520Epithelial%2520Cells%252c%2520donor3.CNhs12014.11404-118D9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11404-118D9 | |id=FF:11404-118D9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000145 | ||
|is_obsolete= | |||
|library_id=CNhs12014 | |||
|library_id_phase_based=2:CNhs12014 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11404 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10014.ACTTGA.11404 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11404 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10014.ACTTGA.11404 | |||
|name=Prostate Epithelial Cells, donor3 | |name=Prostate Epithelial Cells, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12014,LSID837,release011,COMPLETED | |profile_hcage=CNhs12014,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10014,,, | |profile_srnaseq=SRhi10014,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.0191274234626113,0.0128698443426611,0,0,0,0.101831298256717,0.239711778379318,-0.0863344582762307,0.0875672819441666,0,0,0,0,0,0,0,0,0.0382548469252227,0,0.303820231799265,0,0,0.108826317994676,0,0,0,0.50051916241075,0,0.0930697776492258,0,0,0.129192738564241,0,0,0,0,0,0,0,0,0,0,0,0,-0.0269575134750109,0.0577112865277814,0,0,0.0382548469252227,0,0,0,0,0.04387944407622,0,0,0,0,0,0,0,0.296283702794338,0,0,-0.0239325149575492,0,0,0,0,0,0,0,0,0.136188930378109,0,0,0,0,0.0382548469252227,0,0,0,0,0,0,0.0382548469252227,0,0,0.0146191081096395,0.0144970650988694,0,0,0,-0.0584468268118252,0.219589620970549,0,0.0382548469252227,0,0,0.0664379434887497,0.0062541308137073,0,0,0,0,0,0,0.0382548469252227,0,0,0,0.0558329795903852,0,0,0,0,0,0,0.0347010702490907,0.283484383035524,0,0,0,0.053031055265966,0,0,0.0260281330570951,0,0,0 | |||
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| |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=N/A | |rna_catalog_number=N/A | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118D9 | |rna_tube_id=118D9 | ||
|rna_weight_ug=64.4 | |rna_weight_ug=64.4 | ||
|rnaseq_library_id=SRhi10014.ACTTGA | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=CC-2555 | |sample_cell_catalog=CC-2555 | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.45302798048811e-231!GO:0043226;organelle;1.75015030556684e-184!GO:0043229;intracellular organelle;1.1507927146787e-183!GO:0005737;cytoplasm;1.18060717012148e-178!GO:0043231;intracellular membrane-bound organelle;3.03574676957053e-171!GO:0043227;membrane-bound organelle;3.0532698330204e-171!GO:0044422;organelle part;6.80485780631279e-121!GO:0044444;cytoplasmic part;1.61179019761994e-119!GO:0044446;intracellular organelle part;2.21754561263439e-119!GO:0044237;cellular metabolic process;5.43528883351668e-88!GO:0044238;primary metabolic process;5.04981394169009e-87!GO:0030529;ribonucleoprotein complex;9.4668232814902e-82!GO:0032991;macromolecular complex;8.78315803509588e-81!GO:0043170;macromolecule metabolic process;1.76299974897729e-80!GO:0003723;RNA binding;6.11509987983419e-68!GO:0005515;protein binding;8.28518416903785e-68!GO:0005634;nucleus;2.04367746865093e-64!GO:0043233;organelle lumen;4.37463394027718e-63!GO:0031974;membrane-enclosed lumen;4.37463394027718e-63!GO:0005739;mitochondrion;1.96516008910965e-58!GO:0044428;nuclear part;3.3030373464028e-58!GO:0019538;protein metabolic process;5.83001373445202e-55!GO:0005840;ribosome;4.63483617397446e-53!GO:0031090;organelle membrane;1.4370582850316e-52!GO:0006412;translation;1.27184535229303e-51!GO:0044267;cellular protein metabolic process;1.81510825506341e-49!GO:0044260;cellular macromolecule metabolic process;2.83139495045155e-49!GO:0015031;protein transport;1.40295501884781e-46!GO:0003735;structural constituent of ribosome;1.76214583002376e-46!GO:0033036;macromolecule localization;3.21827812228725e-46!GO:0010467;gene expression;5.17275897659526e-46!GO:0006396;RNA processing;3.66473147758449e-45!GO:0043283;biopolymer metabolic process;5.1528334968509e-45!GO:0045184;establishment of protein localization;3.85963489573102e-43!GO:0008104;protein localization;4.98001363912723e-43!GO:0009058;biosynthetic process;2.46120682223525e-42!GO:0033279;ribosomal subunit;5.09383471730501e-41!GO:0044249;cellular biosynthetic process;1.18475626800942e-40!GO:0009059;macromolecule biosynthetic process;6.71477757744606e-40!GO:0016043;cellular component organization and biogenesis;3.49458494596525e-39!GO:0044429;mitochondrial part;5.30963534539494e-39!GO:0005829;cytosol;6.6822515338631e-39!GO:0043234;protein complex;4.89139085869067e-38!GO:0031981;nuclear lumen;5.47599252471503e-38!GO:0031967;organelle envelope;2.47607348330129e-35!GO:0031975;envelope;4.49697737510816e-35!GO:0016071;mRNA metabolic process;1.3937613851862e-34!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.89162323029511e-33!GO:0046907;intracellular transport;6.68834711699914e-33!GO:0008380;RNA splicing;1.88763101222453e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.8863046046028e-30!GO:0006886;intracellular protein transport;1.96774983689644e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.26739530461981e-30!GO:0006397;mRNA processing;2.19060108705372e-29!GO:0065003;macromolecular complex assembly;3.12527889908291e-28!GO:0043228;non-membrane-bound organelle;1.68784002129476e-26!GO:0043232;intracellular non-membrane-bound organelle;1.68784002129476e-26!GO:0005740;mitochondrial envelope;8.6294139967107e-26!GO:0022607;cellular component assembly;2.3316981152175e-24!GO:0012505;endomembrane system;5.88826073550684e-24!GO:0031966;mitochondrial membrane;8.57548357500967e-24!GO:0044445;cytosolic part;2.15153202806617e-23!GO:0005654;nucleoplasm;2.75109335085635e-23!GO:0005681;spliceosome;1.07878929136097e-22!GO:0019866;organelle inner membrane;1.22243248071562e-22!GO:0006996;organelle organization and biogenesis;1.35020188528439e-21!GO:0015935;small ribosomal subunit;1.65299881973394e-21!GO:0003676;nucleic acid binding;2.74906954159325e-21!GO:0016070;RNA metabolic process;2.74906954159325e-21!GO:0005743;mitochondrial inner membrane;2.93432694542641e-21!GO:0006119;oxidative phosphorylation;7.19633707458032e-21!GO:0015934;large ribosomal subunit;1.38944171316323e-20!GO:0006457;protein folding;1.58234274196419e-20!GO:0051641;cellular localization;4.84486695782451e-20!GO:0051649;establishment of cellular localization;6.03914134562599e-20!GO:0044451;nucleoplasm part;1.94532547829285e-19!GO:0022618;protein-RNA complex assembly;3.73405864045829e-19!GO:0005783;endoplasmic reticulum;4.35798892706967e-19!GO:0044455;mitochondrial membrane part;4.0936202027324e-18!GO:0006512;ubiquitin cycle;4.61966425159664e-18!GO:0005794;Golgi apparatus;6.445817837889e-18!GO:0005730;nucleolus;2.43026052234401e-17!GO:0016874;ligase activity;2.43026052234401e-17!GO:0044432;endoplasmic reticulum part;3.73483794609209e-17!GO:0048770;pigment granule;8.18730050129515e-17!GO:0042470;melanosome;8.18730050129515e-17!GO:0006605;protein targeting;1.4482192971665e-16!GO:0008134;transcription factor binding;2.20059059417262e-16!GO:0043412;biopolymer modification;2.20059059417262e-16!GO:0031980;mitochondrial lumen;4.88466548345168e-16!GO:0005759;mitochondrial matrix;4.88466548345168e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.89555193956607e-16!GO:0008135;translation factor activity, nucleic acid binding;8.94190378653704e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.07167266740016e-15!GO:0016462;pyrophosphatase activity;2.08155411014287e-15!GO:0043285;biopolymer catabolic process;2.13131328320988e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.14107716342082e-15!GO:0006511;ubiquitin-dependent protein catabolic process;2.4416603922059e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.82901475270945e-15!GO:0044265;cellular macromolecule catabolic process;3.06324871894937e-15!GO:0000166;nucleotide binding;3.4992679212923e-15!GO:0019941;modification-dependent protein catabolic process;3.54066564728211e-15!GO:0043632;modification-dependent macromolecule catabolic process;3.54066564728211e-15!GO:0006464;protein modification process;3.71016250503209e-15!GO:0044257;cellular protein catabolic process;5.54356052750695e-15!GO:0005761;mitochondrial ribosome;6.0939407380711e-15!GO:0000313;organellar ribosome;6.0939407380711e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.38557367047788e-15!GO:0017111;nucleoside-triphosphatase activity;1.3752241084301e-14!GO:0005746;mitochondrial respiratory chain;2.47242944902116e-14!GO:0012501;programmed cell death;6.18941659393799e-14!GO:0048193;Golgi vesicle transport;9.08384316260168e-14!GO:0006915;apoptosis;1.01351630919016e-13!GO:0009057;macromolecule catabolic process;1.25670702825795e-13!GO:0030163;protein catabolic process;1.29075349260547e-13!GO:0051082;unfolded protein binding;1.71453037171122e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.86357559245739e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.0814692541196e-13!GO:0003743;translation initiation factor activity;3.57371912001142e-13!GO:0005789;endoplasmic reticulum membrane;3.65288831014105e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.70782611207613e-13!GO:0003954;NADH dehydrogenase activity;3.70782611207613e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.70782611207613e-13!GO:0006413;translational initiation;4.1534445733019e-13!GO:0051186;cofactor metabolic process;4.21300322082014e-13!GO:0006259;DNA metabolic process;4.49646410063093e-13!GO:0043687;post-translational protein modification;5.12654363850228e-13!GO:0008219;cell death;1.63634290718013e-12!GO:0016265;death;1.63634290718013e-12!GO:0042254;ribosome biogenesis and assembly;2.43892056842113e-12!GO:0016192;vesicle-mediated transport;3.1454323256533e-12!GO:0000502;proteasome complex (sensu Eukaryota);4.79167071181934e-12!GO:0044248;cellular catabolic process;8.17218874269402e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.33900141313169e-11!GO:0042773;ATP synthesis coupled electron transport;1.33900141313169e-11!GO:0006732;coenzyme metabolic process;1.49828435977214e-11!GO:0006446;regulation of translational initiation;1.97610982252906e-11!GO:0006366;transcription from RNA polymerase II promoter;2.08674904413966e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.89337678465773e-11!GO:0045271;respiratory chain complex I;2.89337678465773e-11!GO:0005747;mitochondrial respiratory chain complex I;2.89337678465773e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;4.86024053414497e-11!GO:0000375;RNA splicing, via transesterification reactions;4.86024053414497e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.86024053414497e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.55420498458023e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.10937360806807e-11!GO:0006913;nucleocytoplasmic transport;1.04978158065922e-10!GO:0005768;endosome;1.6377543118067e-10!GO:0051169;nuclear transport;2.0505835447708e-10!GO:0005635;nuclear envelope;2.20395356470674e-10!GO:0016604;nuclear body;2.81467195011383e-10!GO:0032553;ribonucleotide binding;4.34453217844518e-10!GO:0032555;purine ribonucleotide binding;4.34453217844518e-10!GO:0006461;protein complex assembly;4.63220030399247e-10!GO:0003712;transcription cofactor activity;5.40483322496072e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.62098581967574e-10!GO:0050794;regulation of cellular process;7.60271264392732e-10!GO:0017076;purine nucleotide binding;9.35099942540202e-10!GO:0009055;electron carrier activity;9.4863113089667e-10!GO:0008565;protein transporter activity;9.88859125167233e-10!GO:0008639;small protein conjugating enzyme activity;1.599571392884e-09!GO:0044431;Golgi apparatus part;1.68239468967648e-09!GO:0043067;regulation of programmed cell death;1.76165085093528e-09!GO:0042981;regulation of apoptosis;1.85539714785017e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.96025096167592e-09!GO:0031965;nuclear membrane;2.77912353139408e-09!GO:0004842;ubiquitin-protein ligase activity;3.07620241300792e-09!GO:0019787;small conjugating protein ligase activity;3.15512012599032e-09!GO:0048523;negative regulation of cellular process;3.24973993055618e-09!GO:0016607;nuclear speck;3.46601502468608e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.66764037588461e-09!GO:0005793;ER-Golgi intermediate compartment;4.83202300773715e-09!GO:0017038;protein import;5.16672533977838e-09!GO:0009259;ribonucleotide metabolic process;5.4658026108368e-09!GO:0006399;tRNA metabolic process;6.68150422210622e-09!GO:0051246;regulation of protein metabolic process;7.18505361388744e-09!GO:0006163;purine nucleotide metabolic process;7.27122437354822e-09!GO:0007005;mitochondrion organization and biogenesis;9.5090262255385e-09!GO:0009150;purine ribonucleotide metabolic process;1.47428042905136e-08!GO:0015986;ATP synthesis coupled proton transport;1.48459587960674e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.48459587960674e-08!GO:0051188;cofactor biosynthetic process;2.15166384826585e-08!GO:0009141;nucleoside triphosphate metabolic process;2.18783416863815e-08!GO:0030120;vesicle coat;2.3703297957876e-08!GO:0030662;coated vesicle membrane;2.3703297957876e-08!GO:0006164;purine nucleotide biosynthetic process;2.39309673534407e-08!GO:0003924;GTPase activity;2.65220739503986e-08!GO:0019829;cation-transporting ATPase activity;3.34401477574469e-08!GO:0007049;cell cycle;3.45149481536637e-08!GO:0044453;nuclear membrane part;3.62146612789631e-08!GO:0016881;acid-amino acid ligase activity;4.3735298686564e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.61735744843006e-08!GO:0009199;ribonucleoside triphosphate metabolic process;4.97560208203737e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.17602504007078e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.17602504007078e-08!GO:0009260;ribonucleotide biosynthetic process;5.25977664721963e-08!GO:0048475;coated membrane;6.161925370548e-08!GO:0030117;membrane coat;6.161925370548e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.57067908713494e-08!GO:0009144;purine nucleoside triphosphate metabolic process;7.57067908713494e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.93310763559175e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.93310763559175e-08!GO:0048519;negative regulation of biological process;8.59090737690439e-08!GO:0006888;ER to Golgi vesicle-mediated transport;9.07469136637705e-08!GO:0000139;Golgi membrane;1.11543567353613e-07!GO:0065002;intracellular protein transport across a membrane;1.29936851192951e-07!GO:0016072;rRNA metabolic process;1.32278478124651e-07!GO:0006974;response to DNA damage stimulus;1.5162571044622e-07!GO:0016564;transcription repressor activity;1.56040230988008e-07!GO:0006364;rRNA processing;1.87307554669593e-07!GO:0009108;coenzyme biosynthetic process;1.88233180182858e-07!GO:0009056;catabolic process;1.93432874202649e-07!GO:0006752;group transfer coenzyme metabolic process;2.14630493329214e-07!GO:0006754;ATP biosynthetic process;2.53711541581646e-07!GO:0006753;nucleoside phosphate metabolic process;2.53711541581646e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.06106773778442e-07!GO:0032446;protein modification by small protein conjugation;3.19064668690441e-07!GO:0046034;ATP metabolic process;3.29211660354096e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;4.02075975781716e-07!GO:0005643;nuclear pore;4.06673449645979e-07!GO:0016567;protein ubiquitination;4.458651303172e-07!GO:0030532;small nuclear ribonucleoprotein complex;5.33621522835297e-07!GO:0005524;ATP binding;6.23377249169624e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.23377249169624e-07!GO:0006916;anti-apoptosis;6.53336830078631e-07!GO:0043069;negative regulation of programmed cell death;7.34252010804884e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.42115710202178e-07!GO:0004812;aminoacyl-tRNA ligase activity;8.42115710202178e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.42115710202178e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.53800197641392e-07!GO:0032559;adenyl ribonucleotide binding;8.84179259208876e-07!GO:0006323;DNA packaging;1.09674149386788e-06!GO:0019222;regulation of metabolic process;1.25022470566659e-06!GO:0043066;negative regulation of apoptosis;1.27609467677798e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.33459633606123e-06!GO:0043038;amino acid activation;1.67553946006468e-06!GO:0006418;tRNA aminoacylation for protein translation;1.67553946006468e-06!GO:0043039;tRNA aminoacylation;1.67553946006468e-06!GO:0005525;GTP binding;1.67743543618797e-06!GO:0050657;nucleic acid transport;1.68562330216198e-06!GO:0051236;establishment of RNA localization;1.68562330216198e-06!GO:0050658;RNA transport;1.68562330216198e-06!GO:0006403;RNA localization;1.91029537394133e-06!GO:0030554;adenyl nucleotide binding;2.01556742800217e-06!GO:0005770;late endosome;2.27331805700445e-06!GO:0050789;regulation of biological process;2.32719944489195e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.35548674617489e-06!GO:0031988;membrane-bound vesicle;2.64699213018466e-06!GO:0016887;ATPase activity;2.95241059575465e-06!GO:0000074;regulation of progression through cell cycle;3.0841667175666e-06!GO:0044440;endosomal part;3.23100537078285e-06!GO:0010008;endosome membrane;3.23100537078285e-06!GO:0051726;regulation of cell cycle;3.41387504208384e-06!GO:0003714;transcription corepressor activity;3.86989163490452e-06!GO:0005773;vacuole;3.95124772483756e-06!GO:0016023;cytoplasmic membrane-bound vesicle;4.04386321971598e-06!GO:0051170;nuclear import;4.09269377849049e-06!GO:0006793;phosphorus metabolic process;4.27846908501423e-06!GO:0006796;phosphate metabolic process;4.27846908501423e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.36647074302191e-06!GO:0042623;ATPase activity, coupled;4.46162560962668e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.8565163424991e-06!GO:0016740;transferase activity;5.45300718073995e-06!GO:0031324;negative regulation of cellular metabolic process;7.09642167075064e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.15442540296895e-06!GO:0045259;proton-transporting ATP synthase complex;7.43432984039457e-06!GO:0006613;cotranslational protein targeting to membrane;7.9473525988997e-06!GO:0006606;protein import into nucleus;8.36591365388974e-06!GO:0009060;aerobic respiration;8.82010045520249e-06!GO:0005798;Golgi-associated vesicle;1.05483114603139e-05!GO:0005667;transcription factor complex;1.14764869262848e-05!GO:0046930;pore complex;1.1851378295427e-05!GO:0031982;vesicle;1.18602465566282e-05!GO:0006281;DNA repair;1.35270380800509e-05!GO:0051276;chromosome organization and biogenesis;1.50686916964292e-05!GO:0008026;ATP-dependent helicase activity;1.59336726862389e-05!GO:0043623;cellular protein complex assembly;1.63217535672548e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.63707947859502e-05!GO:0045333;cellular respiration;1.64619347877535e-05!GO:0005762;mitochondrial large ribosomal subunit;1.64619347877535e-05!GO:0000315;organellar large ribosomal subunit;1.64619347877535e-05!GO:0000245;spliceosome assembly;1.76868361026091e-05!GO:0004386;helicase activity;2.14381875866589e-05!GO:0016568;chromatin modification;2.25584788222594e-05!GO:0009719;response to endogenous stimulus;2.31554299641979e-05!GO:0032561;guanyl ribonucleotide binding;2.31554299641979e-05!GO:0019001;guanyl nucleotide binding;2.31554299641979e-05!GO:0000323;lytic vacuole;2.32069156835149e-05!GO:0005764;lysosome;2.32069156835149e-05!GO:0009892;negative regulation of metabolic process;2.55201830016889e-05!GO:0045786;negative regulation of progression through cell cycle;2.64147090119301e-05!GO:0031410;cytoplasmic vesicle;2.66783105213418e-05!GO:0045454;cell redox homeostasis;3.17663871481428e-05!GO:0008654;phospholipid biosynthetic process;3.17663871481428e-05!GO:0009117;nucleotide metabolic process;3.24701702056277e-05!GO:0000151;ubiquitin ligase complex;3.34918710793111e-05!GO:0007264;small GTPase mediated signal transduction;3.35176947036561e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.46461522269202e-05!GO:0016787;hydrolase activity;3.50177089748665e-05!GO:0007243;protein kinase cascade;3.97140162778784e-05!GO:0016859;cis-trans isomerase activity;4.14708098256148e-05!GO:0048471;perinuclear region of cytoplasm;4.31822624941385e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.32187916708796e-05!GO:0051028;mRNA transport;4.45365976616142e-05!GO:0005788;endoplasmic reticulum lumen;4.94926461956373e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.23112112237515e-05!GO:0031252;leading edge;5.75460096547114e-05!GO:0042802;identical protein binding;5.75622688909947e-05!GO:0022402;cell cycle process;6.12535273557026e-05!GO:0043566;structure-specific DNA binding;6.37163533865367e-05!GO:0016481;negative regulation of transcription;6.58851770911869e-05!GO:0048522;positive regulation of cellular process;6.78358947075395e-05!GO:0016563;transcription activator activity;7.6139913478692e-05!GO:0000314;organellar small ribosomal subunit;8.62082407624416e-05!GO:0005763;mitochondrial small ribosomal subunit;8.62082407624416e-05!GO:0016779;nucleotidyltransferase activity;8.64949638461088e-05!GO:0019843;rRNA binding;9.14355363605786e-05!GO:0003724;RNA helicase activity;9.42866123849547e-05!GO:0051427;hormone receptor binding;0.000109071727017631!GO:0005839;proteasome core complex (sensu Eukaryota);0.000117771067217326!GO:0043021;ribonucleoprotein binding;0.000119765085392796!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000127572248232239!GO:0016310;phosphorylation;0.000134410745224271!GO:0009967;positive regulation of signal transduction;0.000139868119783213!GO:0003713;transcription coactivator activity;0.000146636989182343!GO:0016853;isomerase activity;0.000175840848364592!GO:0003697;single-stranded DNA binding;0.00017699750972855!GO:0035257;nuclear hormone receptor binding;0.000184356421617991!GO:0005769;early endosome;0.00020284361989169!GO:0006099;tricarboxylic acid cycle;0.000222428040610902!GO:0046356;acetyl-CoA catabolic process;0.000222428040610902!GO:0005741;mitochondrial outer membrane;0.000233426906072696!GO:0006612;protein targeting to membrane;0.000233426906072696!GO:0033116;ER-Golgi intermediate compartment membrane;0.000253882315548643!GO:0051168;nuclear export;0.00025582846445354!GO:0031968;organelle outer membrane;0.00025668247298074!GO:0031323;regulation of cellular metabolic process;0.000264772659953499!GO:0019899;enzyme binding;0.000271239501571082!GO:0051187;cofactor catabolic process;0.00027755627925197!GO:0009109;coenzyme catabolic process;0.000281969953500371!GO:0019867;outer membrane;0.000312143452459225!GO:0006626;protein targeting to mitochondrion;0.000321120340110817!GO:0003899;DNA-directed RNA polymerase activity;0.000347406531966958!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000363834209299464!GO:0030118;clathrin coat;0.000366401285350051!GO:0006084;acetyl-CoA metabolic process;0.000387197855315282!GO:0030133;transport vesicle;0.000389682155284509!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00043476649062934!GO:0016044;membrane organization and biogenesis;0.00043476649062934!GO:0030658;transport vesicle membrane;0.00048819009526595!GO:0006839;mitochondrial transport;0.00048819009526595!GO:0008250;oligosaccharyl transferase complex;0.000515020205681075!GO:0005885;Arp2/3 protein complex;0.000524351150959014!GO:0004298;threonine endopeptidase activity;0.000545550675522369!GO:0004576;oligosaccharyl transferase activity;0.000545686888919107!GO:0005048;signal sequence binding;0.000557819608768365!GO:0065009;regulation of a molecular function;0.000566607818228721!GO:0006350;transcription;0.000641163844304494!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000653811514091146!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000665106973916166!GO:0007006;mitochondrial membrane organization and biogenesis;0.000665793037193678!GO:0051789;response to protein stimulus;0.000679860463489105!GO:0006986;response to unfolded protein;0.000679860463489105!GO:0030176;integral to endoplasmic reticulum membrane;0.000686711039304326!GO:0065004;protein-DNA complex assembly;0.000695822765616408!GO:0043681;protein import into mitochondrion;0.00072336532569605!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000748230819783782!GO:0030867;rough endoplasmic reticulum membrane;0.000761084771766458!GO:0005905;coated pit;0.000763953326347919!GO:0043065;positive regulation of apoptosis;0.00077922852817526!GO:0051252;regulation of RNA metabolic process;0.000849450101654194!GO:0043068;positive regulation of programmed cell death;0.000967170300862979!GO:0000785;chromatin;0.000992198779054053!GO:0003729;mRNA binding;0.00107641677633903!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00115700973376676!GO:0006333;chromatin assembly or disassembly;0.00120312336595699!GO:0043488;regulation of mRNA stability;0.00122018781441163!GO:0043487;regulation of RNA stability;0.00122018781441163!GO:0030660;Golgi-associated vesicle membrane;0.00123894952265816!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00129855422473595!GO:0010468;regulation of gene expression;0.00134552453131991!GO:0008033;tRNA processing;0.0013739358044813!GO:0006402;mRNA catabolic process;0.00141021699138722!GO:0030119;AP-type membrane coat adaptor complex;0.00148171410814891!GO:0008092;cytoskeletal protein binding;0.00148981288360121!GO:0045892;negative regulation of transcription, DNA-dependent;0.00148981288360121!GO:0048500;signal recognition particle;0.00150510818695509!GO:0046474;glycerophospholipid biosynthetic process;0.00152771047918363!GO:0016491;oxidoreductase activity;0.00153427583532176!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00154729392279631!GO:0051098;regulation of binding;0.00158057967898039!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00158386715864826!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00159803345581657!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00159803345581657!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00159803345581657!GO:0016197;endosome transport;0.00163722467276435!GO:0030132;clathrin coat of coated pit;0.00168226009961823!GO:0051128;regulation of cellular component organization and biogenesis;0.0017247853998839!GO:0030036;actin cytoskeleton organization and biogenesis;0.0017605940441724!GO:0000049;tRNA binding;0.00179502301991228!GO:0065007;biological regulation;0.00182057359101262!GO:0046489;phosphoinositide biosynthetic process;0.00183081663804856!GO:0006891;intra-Golgi vesicle-mediated transport;0.00190831874433145!GO:0051920;peroxiredoxin activity;0.00200162334319088!GO:0006650;glycerophospholipid metabolic process;0.00200402665351606!GO:0030384;phosphoinositide metabolic process;0.00202113314888204!GO:0003690;double-stranded DNA binding;0.00229803225498671!GO:0006260;DNA replication;0.00245933714024173!GO:0030125;clathrin vesicle coat;0.00245937358234648!GO:0030665;clathrin coated vesicle membrane;0.00245937358234648!GO:0031072;heat shock protein binding;0.00264993892512623!GO:0048468;cell development;0.00265789599577275!GO:0045893;positive regulation of transcription, DNA-dependent;0.00267448015180965!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00274252195641828!GO:0030131;clathrin adaptor complex;0.00275637044127952!GO:0018196;peptidyl-asparagine modification;0.00281490428821864!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00281490428821864!GO:0048518;positive regulation of biological process;0.00282991475464708!GO:0006401;RNA catabolic process;0.00299422008894526!GO:0030880;RNA polymerase complex;0.0031754229450644!GO:0008186;RNA-dependent ATPase activity;0.00320872837064307!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00329055853008257!GO:0015399;primary active transmembrane transporter activity;0.00329055853008257!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00334108452452824!GO:0045047;protein targeting to ER;0.00334108452452824!GO:0003702;RNA polymerase II transcription factor activity;0.00340589712204878!GO:0001726;ruffle;0.00382422995036653!GO:0015980;energy derivation by oxidation of organic compounds;0.0038318218299104!GO:0006091;generation of precursor metabolites and energy;0.00403406431300861!GO:0030663;COPI coated vesicle membrane;0.00403715051066016!GO:0030126;COPI vesicle coat;0.00403715051066016!GO:0015992;proton transport;0.00436274542421976!GO:0006414;translational elongation;0.00442416790743182!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00442416790743182!GO:0022890;inorganic cation transmembrane transporter activity;0.00444941211150541!GO:0008361;regulation of cell size;0.00445535426860351!GO:0006417;regulation of translation;0.00448590091778386!GO:0000059;protein import into nucleus, docking;0.00454549132327856!GO:0005684;U2-dependent spliceosome;0.00468949934562759!GO:0006818;hydrogen transport;0.00471186070239799!GO:0005791;rough endoplasmic reticulum;0.0047302421853421!GO:0051101;regulation of DNA binding;0.00481369436604089!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00486085489988019!GO:0046467;membrane lipid biosynthetic process;0.00499377405062102!GO:0008312;7S RNA binding;0.00534568494834703!GO:0030833;regulation of actin filament polymerization;0.00559483120955002!GO:0030659;cytoplasmic vesicle membrane;0.00559483120955002!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00570706668728498!GO:0000428;DNA-directed RNA polymerase complex;0.00570706668728498!GO:0008610;lipid biosynthetic process;0.00582741341530479!GO:0046983;protein dimerization activity;0.00594783508548608!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00603755938738403!GO:0016791;phosphoric monoester hydrolase activity;0.00603755938738403!GO:0006351;transcription, DNA-dependent;0.00609554309075611!GO:0032774;RNA biosynthetic process;0.00620336958012933!GO:0045941;positive regulation of transcription;0.00631082964754388!GO:0016251;general RNA polymerase II transcription factor activity;0.00635257075238303!GO:0008637;apoptotic mitochondrial changes;0.00635314900639502!GO:0030134;ER to Golgi transport vesicle;0.00640176637940171!GO:0006611;protein export from nucleus;0.00646577435343883!GO:0006383;transcription from RNA polymerase III promoter;0.00646730443694715!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.006479737803923!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.006479737803923!GO:0048144;fibroblast proliferation;0.00649894081158897!GO:0048145;regulation of fibroblast proliferation;0.00649894081158897!GO:0008287;protein serine/threonine phosphatase complex;0.00671343042524518!GO:0030029;actin filament-based process;0.00690408672113283!GO:0030127;COPII vesicle coat;0.00711091488492294!GO:0012507;ER to Golgi transport vesicle membrane;0.00711091488492294!GO:0016272;prefoldin complex;0.00739940770988847!GO:0016049;cell growth;0.00743791773339731!GO:0005694;chromosome;0.00753663033459749!GO:0048146;positive regulation of fibroblast proliferation;0.00777686346996792!GO:0009165;nucleotide biosynthetic process;0.00794028079732991!GO:0004004;ATP-dependent RNA helicase activity;0.00798959775031828!GO:0030503;regulation of cell redox homeostasis;0.00800937352617133!GO:0017166;vinculin binding;0.0080906479468957!GO:0008139;nuclear localization sequence binding;0.00859989745774253!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00862241029928034!GO:0044452;nucleolar part;0.008740754322857!GO:0004721;phosphoprotein phosphatase activity;0.00885873694032792!GO:0016363;nuclear matrix;0.00892718402301906!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00894229989619026!GO:0001558;regulation of cell growth;0.00894457818673472!GO:0048487;beta-tubulin binding;0.00929436002808311!GO:0006509;membrane protein ectodomain proteolysis;0.009382644206717!GO:0033619;membrane protein proteolysis;0.009382644206717!GO:0006506;GPI anchor biosynthetic process;0.010169173770127!GO:0006984;ER-nuclear signaling pathway;0.0102401385707065!GO:0043022;ribosome binding;0.0103114271364052!GO:0005813;centrosome;0.0105810178815752!GO:0003711;transcription elongation regulator activity;0.0109280573774365!GO:0030137;COPI-coated vesicle;0.0111603578735226!GO:0030031;cell projection biogenesis;0.0112664303531142!GO:0035258;steroid hormone receptor binding;0.0113019123170492!GO:0006354;RNA elongation;0.0113664176817727!GO:0000096;sulfur amino acid metabolic process;0.0113664176817727!GO:0004674;protein serine/threonine kinase activity;0.0113664176817727!GO:0008632;apoptotic program;0.011650821136154!GO:0051287;NAD binding;0.0116805936982898!GO:0015631;tubulin binding;0.0118335366668256!GO:0045045;secretory pathway;0.0119936519415636!GO:0008234;cysteine-type peptidase activity;0.0123238378869941!GO:0006595;polyamine metabolic process;0.0123238378869941!GO:0007034;vacuolar transport;0.012540888637554!GO:0032507;maintenance of cellular protein localization;0.0129376554749617!GO:0006352;transcription initiation;0.0131598949306822!GO:0006505;GPI anchor metabolic process;0.013358094222631!GO:0016311;dephosphorylation;0.0134182888982974!GO:0007265;Ras protein signal transduction;0.0137998160030654!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0139058443253227!GO:0006917;induction of apoptosis;0.0148416750620257!GO:0030140;trans-Golgi network transport vesicle;0.01493855410594!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0150373817289707!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0153577162087548!GO:0012506;vesicle membrane;0.0155254553466945!GO:0004722;protein serine/threonine phosphatase activity;0.0155254553466945!GO:0006497;protein amino acid lipidation;0.0161417348004845!GO:0051087;chaperone binding;0.0165089613197062!GO:0005774;vacuolar membrane;0.0165089613197062!GO:0005758;mitochondrial intermembrane space;0.0170830478913724!GO:0030041;actin filament polymerization;0.0171473009479164!GO:0003746;translation elongation factor activity;0.017158249011655!GO:0031326;regulation of cellular biosynthetic process;0.0172469360715733!GO:0000278;mitotic cell cycle;0.0173930357083719!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0177861226378417!GO:0044433;cytoplasmic vesicle part;0.018145082403418!GO:0006643;membrane lipid metabolic process;0.018244337509206!GO:0006749;glutathione metabolic process;0.018244337509206!GO:0004680;casein kinase activity;0.01832825017362!GO:0031970;organelle envelope lumen;0.018608967740331!GO:0031902;late endosome membrane;0.0192470380171512!GO:0012502;induction of programmed cell death;0.0195977139942344!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0199066362619208!GO:0046822;regulation of nucleocytoplasmic transport;0.020375216362748!GO:0008629;induction of apoptosis by intracellular signals;0.0212261340929211!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0214468535042764!GO:0006892;post-Golgi vesicle-mediated transport;0.0215038760445785!GO:0000159;protein phosphatase type 2A complex;0.0227384101358533!GO:0042158;lipoprotein biosynthetic process;0.0234372335058009!GO:0006470;protein amino acid dephosphorylation;0.023595146734973!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0241781473737583!GO:0010257;NADH dehydrogenase complex assembly;0.0241781473737583!GO:0033108;mitochondrial respiratory chain complex assembly;0.0241781473737583!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0241781473737583!GO:0015002;heme-copper terminal oxidase activity;0.0241781473737583!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0241781473737583!GO:0004129;cytochrome-c oxidase activity;0.0241781473737583!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0241781473737583!GO:0007050;cell cycle arrest;0.0242159838517622!GO:0031625;ubiquitin protein ligase binding;0.0249652696998606!GO:0007176;regulation of epidermal growth factor receptor activity;0.0252031421064801!GO:0035035;histone acetyltransferase binding;0.0259169847243699!GO:0045449;regulation of transcription;0.0261000080774663!GO:0016126;sterol biosynthetic process;0.0261023641162282!GO:0045334;clathrin-coated endocytic vesicle;0.0261057710470989!GO:0031529;ruffle organization and biogenesis;0.0261500477603249!GO:0006979;response to oxidative stress;0.0264009960146141!GO:0008180;signalosome;0.0264873182778386!GO:0043492;ATPase activity, coupled to movement of substances;0.0268195631253168!GO:0000209;protein polyubiquitination;0.0275890654824263!GO:0008320;protein transmembrane transporter activity;0.0276285089910226!GO:0051651;maintenance of cellular localization;0.0278569305759963!GO:0006376;mRNA splice site selection;0.0281133331106138!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0281133331106138!GO:0006607;NLS-bearing substrate import into nucleus;0.0281688740490765!GO:0022884;macromolecule transmembrane transporter activity;0.0282201537028663!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0282201537028663!GO:0005832;chaperonin-containing T-complex;0.0283040792706537!GO:0044427;chromosomal part;0.0283549155741574!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0287067363071243!GO:0043284;biopolymer biosynthetic process;0.0287067363071243!GO:0008652;amino acid biosynthetic process;0.0287976531880609!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0287976531880609!GO:0033043;regulation of organelle organization and biogenesis;0.0287976531880609!GO:0030521;androgen receptor signaling pathway;0.0287976531880609!GO:0046519;sphingoid metabolic process;0.0288471735548454!GO:0009889;regulation of biosynthetic process;0.0288515803426799!GO:0043433;negative regulation of transcription factor activity;0.0289401317175632!GO:0031901;early endosome membrane;0.0290693413666484!GO:0031301;integral to organelle membrane;0.0290693413666484!GO:0050790;regulation of catalytic activity;0.0290693413666484!GO:0005637;nuclear inner membrane;0.029110634541644!GO:0046966;thyroid hormone receptor binding;0.0294797653888256!GO:0008601;protein phosphatase type 2A regulator activity;0.0296279891149342!GO:0032594;protein transport within lipid bilayer;0.0298179572699657!GO:0032907;transforming growth factor-beta3 production;0.0298179572699657!GO:0032596;protein transport into lipid raft;0.0298179572699657!GO:0032910;regulation of transforming growth factor-beta3 production;0.0298179572699657!GO:0032595;B cell receptor transport within lipid bilayer;0.0298179572699657!GO:0033606;chemokine receptor transport within lipid bilayer;0.0298179572699657!GO:0032600;chemokine receptor transport out of lipid raft;0.0298179572699657!GO:0032599;protein transport out of lipid raft;0.0298179572699657!GO:0032597;B cell receptor transport into lipid raft;0.0298179572699657!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0298179572699657!GO:0043621;protein self-association;0.030268507533252!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0304262180689959!GO:0050662;coenzyme binding;0.0306103128317587!GO:0043624;cellular protein complex disassembly;0.0307581382790063!GO:0005669;transcription factor TFIID complex;0.0309938743891089!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0316033462775209!GO:0007032;endosome organization and biogenesis;0.0326020209713679!GO:0030433;ER-associated protein catabolic process;0.0327388114398642!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0327388114398642!GO:0005149;interleukin-1 receptor binding;0.0329481928178647!GO:0006405;RNA export from nucleus;0.0330560590962852!GO:0001836;release of cytochrome c from mitochondria;0.0335470496168611!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0338435431385295!GO:0032984;macromolecular complex disassembly;0.0344573924615643!GO:0008426;protein kinase C inhibitor activity;0.0351413950706008!GO:0005815;microtubule organizing center;0.0351452455323861!GO:0051540;metal cluster binding;0.0351904947419554!GO:0051536;iron-sulfur cluster binding;0.0351904947419554!GO:0007004;telomere maintenance via telomerase;0.0352380634270869!GO:0009166;nucleotide catabolic process;0.0352672389938867!GO:0008097;5S rRNA binding;0.0354883852562205!GO:0007041;lysosomal transport;0.0361785520466282!GO:0046483;heterocycle metabolic process;0.0361785520466282!GO:0000339;RNA cap binding;0.0365405936663539!GO:0040008;regulation of growth;0.0365405936663539!GO:0044437;vacuolar part;0.0367810552683635!GO:0005869;dynactin complex;0.0369622681451117!GO:0006644;phospholipid metabolic process;0.0369622681451117!GO:0004850;uridine phosphorylase activity;0.0373244834657953!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0379097572025828!GO:0008286;insulin receptor signaling pathway;0.0387222150384186!GO:0008168;methyltransferase activity;0.0387675439959493!GO:0033673;negative regulation of kinase activity;0.0390333312948676!GO:0006469;negative regulation of protein kinase activity;0.0390333312948676!GO:0045947;negative regulation of translational initiation;0.0397887479152481!GO:0007040;lysosome organization and biogenesis;0.0397887479152481!GO:0016741;transferase activity, transferring one-carbon groups;0.0399418214906957!GO:0030216;keratinocyte differentiation;0.0408357577977596!GO:0045185;maintenance of protein localization;0.0412599743207712!GO:0007033;vacuole organization and biogenesis;0.0415794828723622!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0415975891362265!GO:0030032;lamellipodium biogenesis;0.0418260136920616!GO:0050178;phenylpyruvate tautomerase activity;0.0418438965540749!GO:0004563;beta-N-acetylhexosaminidase activity;0.0419911098963331!GO:0030027;lamellipodium;0.0430923103110106!GO:0050681;androgen receptor binding;0.0431393674381454!GO:0006289;nucleotide-excision repair;0.0437768580472358!GO:0017134;fibroblast growth factor binding;0.044188008021332!GO:0006334;nucleosome assembly;0.0443763699474426!GO:0005765;lysosomal membrane;0.0443763699474426!GO:0004681;casein kinase I activity;0.0446589823167577!GO:0030518;steroid hormone receptor signaling pathway;0.0447635424468962!GO:0005784;translocon complex;0.0449389052222498!GO:0009112;nucleobase metabolic process;0.0450511449753481!GO:0009116;nucleoside metabolic process;0.0453252758674166!GO:0008154;actin polymerization and/or depolymerization;0.0458608124217359!GO:0022406;membrane docking;0.0461359058468387!GO:0048278;vesicle docking;0.0461359058468387!GO:0003756;protein disulfide isomerase activity;0.0469653500313289!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0469653500313289!GO:0032535;regulation of cellular component size;0.047194709464673!GO:0006672;ceramide metabolic process;0.0472867116787773!GO:0031371;ubiquitin conjugating enzyme complex;0.0480199010721135!GO:0030911;TPR domain binding;0.0480719507852837!GO:0051338;regulation of transferase activity;0.0489721823681405!GO:0015630;microtubule cytoskeleton;0.0489721823681405!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0490205598526454!GO:0001533;cornified envelope;0.0496443595461264!GO:0031497;chromatin assembly;0.0499262332467054 | |||
|sample_id=11404 | |sample_id=11404 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=prostate | |sample_tissue=prostate | ||
|top_motifs=ZEB1:2.47551300271;TBX4,5:2.27338892747;TEF:2.23614868651;TP53:2.11598512574;SNAI1..3:2.05292403973;AIRE:1.93592790038;PDX1:1.64645834411;PPARG:1.60597114632;ONECUT1,2:1.59840226623;MYOD1:1.43637634928;FOXQ1:1.41516586047;ARID5B:1.32956224906;NKX2-3_NKX2-5:1.32859486824;VSX1,2:1.31560927177;NKX2-1,4:1.10740625858;bHLH_family:1.05580902478;FOXM1:0.93487056199;CDC5L:0.873769172589;LMO2:0.872616204717;FOX{I1,J2}:0.867891199211;EVI1:0.860967419114;PAX1,9:0.85790020162;POU1F1:0.837091886388;HOX{A4,D4}:0.836666040256;UFEwm:0.808253959525;ADNP_IRX_SIX_ZHX:0.789718531201;KLF4:0.760694925137;CRX:0.752633180486;TEAD1:0.684313958533;ZBTB16:0.645727627059;TFCP2:0.644833805817;ELK1,4_GABP{A,B1}:0.638038412897;SP1:0.631461680811;TOPORS:0.628797718105;FOXO1,3,4:0.621599848731;NKX2-2,8:0.614836786612;ALX1:0.606149502896;ZNF423:0.557480304999;ZNF384:0.545083136181;IKZF1:0.543938403688;HIF1A:0.518515786018;TFAP2{A,C}:0.496117016512;NR5A1,2:0.445917326941;XCPE1{core}:0.440482245668;ZIC1..3:0.430731031061;NR6A1:0.426174793608;ZNF148:0.413098458208;FOX{F1,F2,J1}:0.359582517541;PITX1..3:0.353232995971;TBP:0.333560920095;HLF:0.328792686865;NFIL3:0.319314361109;FOS_FOS{B,L1}_JUN{B,D}:0.305006686363;PAX4:0.299566958391;RREB1:0.29409424541;T:0.292275121426;ATF4:0.28897547828;GLI1..3:0.288054928838;RXR{A,B,G}:0.279464184398;NKX6-1,2:0.278741553804;SREBF1,2:0.264565015918;FOSL2:0.255286146878;ZBTB6:0.240892398816;GFI1B:0.215467133826;ALX4:0.211779840561;CDX1,2,4:0.196912912063;BACH2:0.173448376442;FOXN1:0.172875584733;HAND1,2:0.160064188168;IKZF2:0.158198465965;ZFP161:0.140080934407;ESR1:0.133783839836;MAZ:0.129344430988;CEBPA,B_DDIT3:0.103696910767;RBPJ:0.0780421531473;TFAP2B:0.0378221091731;GZF1:0.0337436091139;STAT5{A,B}:0.0236849112721;ATF2:0.0190675002496;NKX3-1:0.00941392858139;LHX3,4:0.00353651498165;PAX8:-0.00917802348204;NFE2:-0.0134690655099;ATF5_CREB3:-0.0178461611628;HNF4A_NR2F1,2:-0.0187208360781;FOXL1:-0.0345844998004;ZNF143:-0.0436912399482;BPTF:-0.0724087440148;MYFfamily:-0.0844743080409;POU6F1:-0.0919951435697;NR3C1:-0.115913162359;MTF1:-0.137116503155;SOX17:-0.143865839075;TLX1..3_NFIC{dimer}:-0.163368033215;PATZ1:-0.190320500881;MED-1{core}:-0.199321768715;NRF1:-0.206273130033;NKX3-2:-0.214026538982;FOXP1:-0.238256100206;TFAP4:-0.245873289272;FOXD3:-0.252019852932;PRDM1:-0.252154057402;REST:-0.253201150296;LEF1_TCF7_TCF7L1,2:-0.2639650353;PAX6:-0.273903799266;PAX2:-0.281969827969;HNF1A:-0.292702433844;EN1,2:-0.296720619551;NR1H4:-0.298471906947;CREB1:-0.299641984436;HOX{A5,B5}:-0.30503188184;GATA4:-0.309868778269;HSF1,2:-0.317231993689;TLX2:-0.319301291081;EGR1..3:-0.319657844238;ATF6:-0.321987494068;GTF2A1,2:-0.331012162868;POU2F1..3:-0.341433224509;MAFB:-0.346754686886;HOX{A6,A7,B6,B7}:-0.357247573199;HMX1:-0.362192281439;CUX2:-0.362790199779;SOX2:-0.370758683715;OCT4_SOX2{dimer}:-0.373431986636;RFX2..5_RFXANK_RFXAP:-0.375153907799;EBF1:-0.378505765349;GTF2I:-0.390006778747;SPZ1:-0.39172819388;SPI1:-0.402730698454;MTE{core}:-0.420746004443;PAX5:-0.422680002521;EP300:-0.424104036799;TFDP1:-0.426075472952;HMGA1,2:-0.440621374471;NANOG:-0.447897695896;AHR_ARNT_ARNT2:-0.450663909757;NFIX:-0.451872247553;SPIB:-0.455406701666;BREu{core}:-0.464828550282;NFKB1_REL_RELA:-0.468776029226;ELF1,2,4:-0.484978286129;ZNF238:-0.490807400248;IRF7:-0.493933384587;JUN:-0.504710052535;HIC1:-0.523993148035;SMAD1..7,9:-0.543311073701;NHLH1,2:-0.558370398343;STAT2,4,6:-0.563716970752;MYBL2:-0.564480969561;YY1:-0.580222749485;ESRRA:-0.58107906216;POU3F1..4:-0.584584322399;RXRA_VDR{dimer}:-0.602195398654;ETS1,2:-0.615047465978;RORA:-0.626655606114;DMAP1_NCOR{1,2}_SMARC:-0.647735132851;PBX1:-0.670741356851;GATA6:-0.703216349478;AR:-0.730024640651;TAL1_TCF{3,4,12}:-0.748182404967;FOXP3:-0.752977624917;PAX3,7:-0.75374419037;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.754623419362;FOX{D1,D2}:-0.76135117992;NFE2L2:-0.845794619713;PRRX1,2:-0.846151450467;POU5F1:-0.849339630025;MYB:-0.85535992381;MZF1:-0.858088608228;MEF2{A,B,C,D}:-0.859200601195;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.885012994802;STAT1,3:-0.900918082361;SOX5:-0.93891899297;FOXA2:-0.942278715703;RUNX1..3:-0.956527518915;RFX1:-1.02083181355;NFE2L1:-1.02484929807;SRF:-1.03160986063;NFY{A,B,C}:-1.05650388309;HES1:-1.10227118488;E2F1..5:-1.13462411646;IRF1,2:-1.15857810931;GCM1,2:-1.1830622393;HOXA9_MEIS1:-1.19543172314;NFATC1..3:-1.20883178062;TGIF1:-1.23779894378;HBP1_HMGB_SSRP1_UBTF:-1.25605379664;SOX{8,9,10}:-1.27646217699;GFI1:-1.30148626372;DBP:-1.38498432217;XBP1:-1.71261828469;NANOG{mouse}:-1.90618123845 | |top_motifs=ZEB1:2.47551300271;TBX4,5:2.27338892747;TEF:2.23614868651;TP53:2.11598512574;SNAI1..3:2.05292403973;AIRE:1.93592790038;PDX1:1.64645834411;PPARG:1.60597114632;ONECUT1,2:1.59840226623;MYOD1:1.43637634928;FOXQ1:1.41516586047;ARID5B:1.32956224906;NKX2-3_NKX2-5:1.32859486824;VSX1,2:1.31560927177;NKX2-1,4:1.10740625858;bHLH_family:1.05580902478;FOXM1:0.93487056199;CDC5L:0.873769172589;LMO2:0.872616204717;FOX{I1,J2}:0.867891199211;EVI1:0.860967419114;PAX1,9:0.85790020162;POU1F1:0.837091886388;HOX{A4,D4}:0.836666040256;UFEwm:0.808253959525;ADNP_IRX_SIX_ZHX:0.789718531201;KLF4:0.760694925137;CRX:0.752633180486;TEAD1:0.684313958533;ZBTB16:0.645727627059;TFCP2:0.644833805817;ELK1,4_GABP{A,B1}:0.638038412897;SP1:0.631461680811;TOPORS:0.628797718105;FOXO1,3,4:0.621599848731;NKX2-2,8:0.614836786612;ALX1:0.606149502896;ZNF423:0.557480304999;ZNF384:0.545083136181;IKZF1:0.543938403688;HIF1A:0.518515786018;TFAP2{A,C}:0.496117016512;NR5A1,2:0.445917326941;XCPE1{core}:0.440482245668;ZIC1..3:0.430731031061;NR6A1:0.426174793608;ZNF148:0.413098458208;FOX{F1,F2,J1}:0.359582517541;PITX1..3:0.353232995971;TBP:0.333560920095;HLF:0.328792686865;NFIL3:0.319314361109;FOS_FOS{B,L1}_JUN{B,D}:0.305006686363;PAX4:0.299566958391;RREB1:0.29409424541;T:0.292275121426;ATF4:0.28897547828;GLI1..3:0.288054928838;RXR{A,B,G}:0.279464184398;NKX6-1,2:0.278741553804;SREBF1,2:0.264565015918;FOSL2:0.255286146878;ZBTB6:0.240892398816;GFI1B:0.215467133826;ALX4:0.211779840561;CDX1,2,4:0.196912912063;BACH2:0.173448376442;FOXN1:0.172875584733;HAND1,2:0.160064188168;IKZF2:0.158198465965;ZFP161:0.140080934407;ESR1:0.133783839836;MAZ:0.129344430988;CEBPA,B_DDIT3:0.103696910767;RBPJ:0.0780421531473;TFAP2B:0.0378221091731;GZF1:0.0337436091139;STAT5{A,B}:0.0236849112721;ATF2:0.0190675002496;NKX3-1:0.00941392858139;LHX3,4:0.00353651498165;PAX8:-0.00917802348204;NFE2:-0.0134690655099;ATF5_CREB3:-0.0178461611628;HNF4A_NR2F1,2:-0.0187208360781;FOXL1:-0.0345844998004;ZNF143:-0.0436912399482;BPTF:-0.0724087440148;MYFfamily:-0.0844743080409;POU6F1:-0.0919951435697;NR3C1:-0.115913162359;MTF1:-0.137116503155;SOX17:-0.143865839075;TLX1..3_NFIC{dimer}:-0.163368033215;PATZ1:-0.190320500881;MED-1{core}:-0.199321768715;NRF1:-0.206273130033;NKX3-2:-0.214026538982;FOXP1:-0.238256100206;TFAP4:-0.245873289272;FOXD3:-0.252019852932;PRDM1:-0.252154057402;REST:-0.253201150296;LEF1_TCF7_TCF7L1,2:-0.2639650353;PAX6:-0.273903799266;PAX2:-0.281969827969;HNF1A:-0.292702433844;EN1,2:-0.296720619551;NR1H4:-0.298471906947;CREB1:-0.299641984436;HOX{A5,B5}:-0.30503188184;GATA4:-0.309868778269;HSF1,2:-0.317231993689;TLX2:-0.319301291081;EGR1..3:-0.319657844238;ATF6:-0.321987494068;GTF2A1,2:-0.331012162868;POU2F1..3:-0.341433224509;MAFB:-0.346754686886;HOX{A6,A7,B6,B7}:-0.357247573199;HMX1:-0.362192281439;CUX2:-0.362790199779;SOX2:-0.370758683715;OCT4_SOX2{dimer}:-0.373431986636;RFX2..5_RFXANK_RFXAP:-0.375153907799;EBF1:-0.378505765349;GTF2I:-0.390006778747;SPZ1:-0.39172819388;SPI1:-0.402730698454;MTE{core}:-0.420746004443;PAX5:-0.422680002521;EP300:-0.424104036799;TFDP1:-0.426075472952;HMGA1,2:-0.440621374471;NANOG:-0.447897695896;AHR_ARNT_ARNT2:-0.450663909757;NFIX:-0.451872247553;SPIB:-0.455406701666;BREu{core}:-0.464828550282;NFKB1_REL_RELA:-0.468776029226;ELF1,2,4:-0.484978286129;ZNF238:-0.490807400248;IRF7:-0.493933384587;JUN:-0.504710052535;HIC1:-0.523993148035;SMAD1..7,9:-0.543311073701;NHLH1,2:-0.558370398343;STAT2,4,6:-0.563716970752;MYBL2:-0.564480969561;YY1:-0.580222749485;ESRRA:-0.58107906216;POU3F1..4:-0.584584322399;RXRA_VDR{dimer}:-0.602195398654;ETS1,2:-0.615047465978;RORA:-0.626655606114;DMAP1_NCOR{1,2}_SMARC:-0.647735132851;PBX1:-0.670741356851;GATA6:-0.703216349478;AR:-0.730024640651;TAL1_TCF{3,4,12}:-0.748182404967;FOXP3:-0.752977624917;PAX3,7:-0.75374419037;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.754623419362;FOX{D1,D2}:-0.76135117992;NFE2L2:-0.845794619713;PRRX1,2:-0.846151450467;POU5F1:-0.849339630025;MYB:-0.85535992381;MZF1:-0.858088608228;MEF2{A,B,C,D}:-0.859200601195;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.885012994802;STAT1,3:-0.900918082361;SOX5:-0.93891899297;FOXA2:-0.942278715703;RUNX1..3:-0.956527518915;RFX1:-1.02083181355;NFE2L1:-1.02484929807;SRF:-1.03160986063;NFY{A,B,C}:-1.05650388309;HES1:-1.10227118488;E2F1..5:-1.13462411646;IRF1,2:-1.15857810931;GCM1,2:-1.1830622393;HOXA9_MEIS1:-1.19543172314;NFATC1..3:-1.20883178062;TGIF1:-1.23779894378;HBP1_HMGB_SSRP1_UBTF:-1.25605379664;SOX{8,9,10}:-1.27646217699;GFI1:-1.30148626372;DBP:-1.38498432217;XBP1:-1.71261828469;NANOG{mouse}:-1.90618123845 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11404-118D9;search_select_hide=table117:FF:11404-118D9 | |||
}} | }} | ||
Latest revision as of 17:58, 4 June 2020
| Name: | Prostate Epithelial Cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12014 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12014
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12014
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.339 |
| 10 | 10 | 0.722 |
| 100 | 100 | 0.644 |
| 101 | 101 | 0.531 |
| 102 | 102 | 0.213 |
| 103 | 103 | 0.593 |
| 104 | 104 | 0.873 |
| 105 | 105 | 0.656 |
| 106 | 106 | 0.218 |
| 107 | 107 | 0.197 |
| 108 | 108 | 0.0328 |
| 109 | 109 | 0.0066 |
| 11 | 11 | 0.708 |
| 110 | 110 | 0.254 |
| 111 | 111 | 0.0885 |
| 112 | 112 | 0.162 |
| 113 | 113 | 0.488 |
| 114 | 114 | 0.521 |
| 115 | 115 | 0.0465 |
| 116 | 116 | 0.912 |
| 117 | 117 | 0.187 |
| 118 | 118 | 0.81 |
| 119 | 119 | 0.249 |
| 12 | 12 | 0.865 |
| 120 | 120 | 0.00829 |
| 121 | 121 | 0.167 |
| 122 | 122 | 0.782 |
| 123 | 123 | 0.817 |
| 124 | 124 | 0.0399 |
| 125 | 125 | 0.725 |
| 126 | 126 | 0.41 |
| 127 | 127 | 0.33 |
| 128 | 128 | 0.96 |
| 129 | 129 | 0.115 |
| 13 | 13 | 0.129 |
| 130 | 130 | 0.0257 |
| 131 | 131 | 0.852 |
| 132 | 132 | 0.191 |
| 133 | 133 | 9.63718e-4 |
| 134 | 134 | 0.0801 |
| 135 | 135 | 0.5 |
| 136 | 136 | 0.0198 |
| 137 | 137 | 0.653 |
| 138 | 138 | 0.404 |
| 139 | 139 | 0.027 |
| 14 | 14 | 0.861 |
| 140 | 140 | 0.0916 |
| 141 | 141 | 0.459 |
| 142 | 142 | 0.469 |
| 143 | 143 | 0.193 |
| 144 | 144 | 0.18 |
| 145 | 145 | 0.635 |
| 146 | 146 | 0.319 |
| 147 | 147 | 0.662 |
| 148 | 148 | 0.261 |
| 149 | 149 | 0.684 |
| 15 | 15 | 0.96 |
| 150 | 150 | 0.665 |
| 151 | 151 | 0.482 |
| 152 | 152 | 0.0365 |
| 153 | 153 | 0.331 |
| 154 | 154 | 0.461 |
| 155 | 155 | 0.637 |
| 156 | 156 | 0.623 |
| 157 | 157 | 0.461 |
| 158 | 158 | 0.912 |
| 159 | 159 | 0.855 |
| 16 | 16 | 0.0499 |
| 160 | 160 | 0.443 |
| 161 | 161 | 0.342 |
| 162 | 162 | 0.476 |
| 163 | 163 | 0.786 |
| 164 | 164 | 0.0154 |
| 165 | 165 | 0.733 |
| 166 | 166 | 0.51 |
| 167 | 167 | 0.682 |
| 168 | 168 | 0.91 |
| 169 | 169 | 0.103 |
| 17 | 17 | 0.326 |
| 18 | 18 | 0.179 |
| 19 | 19 | 0.934 |
| 2 | 2 | 0.109 |
| 20 | 20 | 0.312 |
| 21 | 21 | 0.0752 |
| 22 | 22 | 0.7 |
| 23 | 23 | 0.362 |
| 24 | 24 | 0.22 |
| 25 | 25 | 0.603 |
| 26 | 26 | 0.516 |
| 27 | 27 | 0.856 |
| 28 | 28 | 0.615 |
| 29 | 29 | 0.293 |
| 3 | 3 | 0.39 |
| 30 | 30 | 0.382 |
| 31 | 31 | 0.774 |
| 32 | 32 | 0.391 |
| 33 | 33 | 0.586 |
| 34 | 34 | 0.168 |
| 35 | 35 | 0.27 |
| 36 | 36 | 0.249 |
| 37 | 37 | 0.219 |
| 38 | 38 | 0.418 |
| 39 | 39 | 0.46 |
| 4 | 4 | 0.549 |
| 40 | 40 | 0.21 |
| 41 | 41 | 0.142 |
| 42 | 42 | 0.983 |
| 43 | 43 | 0.796 |
| 44 | 44 | 0.107 |
| 45 | 45 | 0.439 |
| 46 | 46 | 0.603 |
| 47 | 47 | 0.379 |
| 48 | 48 | 0.429 |
| 49 | 49 | 0.657 |
| 5 | 5 | 0.457 |
| 50 | 50 | 0.666 |
| 51 | 51 | 0.979 |
| 52 | 52 | 0.562 |
| 53 | 53 | 0.449 |
| 54 | 54 | 0.496 |
| 55 | 55 | 0.355 |
| 56 | 56 | 0.41 |
| 57 | 57 | 0.211 |
| 58 | 58 | 0.939 |
| 59 | 59 | 0.532 |
| 6 | 6 | 0.298 |
| 60 | 60 | 0.601 |
| 61 | 61 | 0.239 |
| 62 | 62 | 0.573 |
| 63 | 63 | 0.172 |
| 64 | 64 | 0.627 |
| 65 | 65 | 0.367 |
| 66 | 66 | 0.551 |
| 67 | 67 | 0.416 |
| 68 | 68 | 0.136 |
| 69 | 69 | 0.174 |
| 7 | 7 | 0.808 |
| 70 | 70 | 0.0039 |
| 71 | 71 | 0.932 |
| 72 | 72 | 0.447 |
| 73 | 73 | 0.0133 |
| 74 | 74 | 0.0736 |
| 75 | 75 | 0.338 |
| 76 | 76 | 0.567 |
| 77 | 77 | 0.0683 |
| 78 | 78 | 0.0107 |
| 79 | 79 | 0.763 |
| 8 | 8 | 0.67 |
| 80 | 80 | 0.0342 |
| 81 | 81 | 0.876 |
| 82 | 82 | 0.356 |
| 83 | 83 | 0.284 |
| 84 | 84 | 0.474 |
| 85 | 85 | 0.46 |
| 86 | 86 | 0.783 |
| 87 | 87 | 0.123 |
| 88 | 88 | 0.702 |
| 89 | 89 | 0.0841 |
| 9 | 9 | 0.24 |
| 90 | 90 | 0.859 |
| 91 | 91 | 0.511 |
| 92 | 92 | 0.377 |
| 93 | 93 | 0.685 |
| 94 | 94 | 0.885 |
| 95 | 95 | 0.0523 |
| 96 | 96 | 0.249 |
| 97 | 97 | 0.246 |
| 98 | 98 | 0.872 |
| 99 | 99 | 0.319 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12014
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002231 (epithelial cell of prostate)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002367 (prostate gland)
0005156 (reproductive structure)
0004119 (endoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002530 (gland)
0010147 (male accessory sex gland)
0010317 (germ layer / neural crest derived structure)
0003937 (sex gland)
0005399 (male reproductive gland)
0003101 (male organism)
0000079 (male reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000145 (human prostate epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)
