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{{f5samples
{{f5samples
|id=FF:11456-119A7
|DRA_sample_Accession=CAGE@SAMD00005027
|name=Fibroblast - Cardiac, donor5
|accession_numbers=CAGE;DRX008247;DRR009119;DRZ000544;DRZ001929;DRZ011894;DRZ013279
|sample_id=11456
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=119A7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0002494,CL:0000057,CL:0002548
|rna_box=119
|rna_position=A7
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=2832
|rna_catalog_number=SC6305
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=fetus
|sample_tissue=heart
|sample_donor(cell lot)=
|sample_sex=unknown
|sample_age=fetal
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=fibroblast
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.67
|sample_note=
|profile_hcage=CNhs12057,LSID838,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002494,CL:0002548
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002384,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000057,FF:0000001,FF:0000059
|comment=
|created_by=tmeehan
|creation_date=2011-06-15T12:34:29Z
|data_phase=2
|datafreeze_phase=2
|def="A fibroblast from cardiac tissue." [GOC:tfm]
|expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.78!59.81!SOX17;;chr19:46801639..46801699,+!p1@HIF3A!1.56!35.56!HIF3A;;chr7:35293685..35293718,-!p1@TBX20!1.55!34.76!TBX20;;chr8:11561684..11561751,+!p1@GATA4!1.55!34.35!GATA4;;chr20:62680984..62680999,-!p1@SOX18!1.27!23.17!SOX18;;chr4:174451370..174451387,-!p1@HAND2!1.18!14.28!HAND2;;chr6:134210243..134210257,+!p1@TCF21!1.16!13.47!TCF21;;chr21:39870339..39870443,-!p1@ERG!1.10!11.72!ERG;;chr18:19749541..19749557,+!p1@GATA6!1.08!35.29!GATA6;;chr18:53068911..53068935,-!p4@TCF4!1.07!12.12!TCF4;;chr3:141087393..141087426,+!p3@ZBTB38!1.05!40.82!ZBTB38;;chr8:10588010..10588030,-!p1@SOX7!1.04!9.97!SOX7;;chr17:6926362..6926377,+!p1@BCL6B!1.03!9.70!BCL6B;;chr7:19157248..19157268,-!p1@TWIST1!1.00!25.46!TWIST1;;chrY:21906594..21906622,-!p1@KDM5D!0.97!8.35!KDM5D;;chr11:61520075..61520136,+!p1@C11orf9!0.95!17.38!C11orf9;;chrY:2803415..2803468,+!p1@ZFY!0.95!7.95!ZFY;;chr8:72756637..72756664,-!p3@MSC!0.93!8.49!MSC;;chr11:46299199..46299233,+!p1@CREB3L1!0.92!39.47!CREB3L1;;chr6:85474299..85474324,-!p1@TBX18!0.92!13.34!TBX18;;chr12:66218598..66218645,+!p2@HMGA2!0.91!34.08!HMGA2;;chr11:113930425..113930471,+!p1@ZBTB16!0.91!10.51!ZBTB16;;chr20:42543441..42543497,+!p1@TOX2!0.90!32.33!TOX2;;chr18:53257001..53257015,-!p5@TCF4!0.90!12.26!TCF4;;chr8:72756267..72756296,-!p4@MSC!0.90!10.51!MSC;;chr1:170633348..170633399,+!p2@PRRX1!0.90!9.56!PRRX1;;chr6:85473156..85473210,-!p2@TBX18!0.90!8.62!TBX18;;chr1:170633262..170633285,+!p3@PRRX1!0.88!7.68!PRRX1;;chr14:62162285..62162296,+!p3@HIF1A!0.87!34.89!HIF1A;;chr8:72756667..72756736,-!p2@MSC!0.87!10.24!MSC;;chr10:94449703..94449718,+!p1@HHEX!0.86!25.19!HHEX;;chr3:169381420..169381535,-!p1@MECOM!0.86!7.41!MECOM;;chr8:106330656..106330684,+!p1@ZFPM2!0.85!16.84!ZFPM2;;chr6:126240380..126240430,+!p2@NCOA7!0.85!16.57!NCOA7;;chr8:72756063..72756125,-!p1@MSC!0.85!12.93!MSC;;chr12:66218255..66218304,+!p3@HMGA2!0.84!16.70!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!0.84!8.62!GATA6;;chr17:1959369..1959388,+!p2@HIC1!0.83!15.90!HIC1;;chr10:131762504..131762555,-!p1@EBF3!0.83!5.79!EBF3;;chr12:66218836..66218888,+!p1@HMGA2!0.81!55.64!HMGA2;;chr20:42543506..42543549,+!p2@TOX2!0.81!13.88!TOX2;;chr4:174450089..174450153,-!p2@HAND2!0.81!5.52!HAND2;;chr9:16705069..16705086,-!p3@BNC2!0.81!5.39!BNC2;;chr5:92918919..92918942,+!p1@NR2F1!0.80!25.73!NR2F1;;chr7:19157043..19157088,-!p2@TWIST1!0.80!14.01!TWIST1;;chr14:62162258..62162269,+!p2@HIF1A!0.79!54.15!HIF1A;;chr15:83953397..83953425,-!p1@BNC1!0.79!6.06!BNC1;;chr1:170632285..170632309,+!p1@PRRX1!0.79!5.93!PRRX1;;chr2:46524537..46524553,+!p1@EPAS1!0.77!526.99!EPAS1;;chr9:14314131..14314147,-!p2@NFIB!0.74!27.62!NFIB;;chrX:106960180..106960197,-!p2@TSC22D3!0.74!18.99!TSC22D3;;chr3:141087454..141087465,+!p19@ZBTB38!0.74!4.45!ZBTB38;;chr3:168864315..168864339,-!p2@MECOM!0.73!7.68!MECOM;;chr8:49833948..49833973,-!p2@SNAI2!0.72!30.04!SNAI2;;chrX:106960285..106960299,-!p1@TSC22D3!0.71!125.42!TSC22D3;;chr17:46132044..46132080,+!p4@NFE2L1!0.71!4.18!NFE2L1;;chr12:96588368..96588394,+!p3@ELK3!0.70!11.99!ELK3;;chr11:46299539..46299620,+!p2@CREB3L1!0.70!7.14!CREB3L1;;chr6:1610293..1610310,+!p1@FOXC1!0.69!6.87!FOXC1;;chr12:66218183..66218209,+!p4@HMGA2!0.67!7.68!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!0.67!5.66!HMGA2;;chr2:46524897..46524911,+!p2@EPAS1!0.66!11.18!EPAS1;;chr9:14314566..14314618,-!p1@NFIB!0.65!48.50!NFIB;;chr11:128563948..128564003,+!p1@FLI1!0.65!48.36!FLI1;;chr1:158979872..158979898,+!p3@IFI16!0.65!12.12!IFI16;;chr2:19558373..19558392,-!p1@OSR1!0.65!10.64!OSR1;;chr1:170632959..170632987,+!p4@PRRX1!0.65!3.91!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.65!3.50!FOXS1;;chr6:29648890..29648944,-!p1@ZFP57!0.65!3.50!ZFP57;;chr8:72755987..72756002,-!p7@MSC!0.65!3.50!MSC;;chr3:12329397..12329433,+!p2@PPARG!0.62!8.08!PPARG;;chr6:126070769..126070801,+!p1@HEY2!0.62!3.77!HEY2;;chr3:168865194..168865245,-!p3@MECOM!0.61!4.18!MECOM;;chr8:72756023..72756055,-!p6@MSC!0.61!4.04!MSC;;chr9:14083467..14083483,-!p4@NFIB!0.60!8.49!NFIB;;chr11:128563652..128563689,+!p3@FLI1!0.60!2.96!FLI1;;chr14:62162224..62162254,+!p1@HIF1A!0.59!515.13!HIF1A;;chr7:17338266..17338282,+!p1@AHR!0.59!37.72!AHR;;chr3:128206762..128206781,-!p2@GATA2!0.59!21.55!GATA2;;chr5:92918956..92918969,+!p4@NR2F1!0.59!3.23!NR2F1;;chr17:46126136..46126152,+!p1@NFE2L1!0.58!177.82!NFE2L1;;chr3:141087339..141087387,+!p2@ZBTB38!0.58!34.89!ZBTB38;;chr18:53255415..53255491,-!p1@TCF4!0.58!28.83!TCF4;;chr3:178789522..178789564,-!p2@ZMAT3!0.58!24.92!ZMAT3;;chr15:37392616..37392638,-!p2@MEIS2!0.58!10.37!MEIS2;;chr9:14082760..14082775,-!p6@NFIB!0.58!5.12!NFIB;;chr8:80679993..80680011,-!p1@HEY1!0.58!4.45!HEY1;;chr11:113930291..113930339,+!p2@ZBTB16!0.57!4.85!ZBTB16;;chr15:37390374..37390422,-!p9@MEIS2!0.57!3.50!MEIS2;;chr2:214014959..214015006,-!p4@IKZF2!0.57!2.69!IKZF2;;chr8:49833978..49833996,-!p1@SNAI2!0.56!67.89!SNAI2;;chr2:239756739..239756755,+!p2@TWIST2!0.56!4.98!TWIST2;;chr8:72756213..72756243,-!p5@MSC!0.56!3.64!MSC;;chr6:126102292..126102329,+!p3@NCOA7!0.55!9.97!NCOA7;;chr18:53177984..53178004,-!p17@TCF4!0.55!2.56!TCF4;;chr10:94449675..94449694,+!p2@HHEX!0.54!7.81!HHEX;;chr1:23885981..23886002,-!p1@ID3!0.53!538.71!ID3;;chr7:26191809..26191890,+!p1@NFE2L3!0.53!14.68!NFE2L3;;chr2:239756671..239756732,+!p1@TWIST2!0.53!9.30!TWIST2;;chr3:25469724..25469773,+!p1@RARB!0.53!3.77!RARB;;chr2:46602879..46602899,+!p8@EPAS1!0.53!3.10!EPAS1;;chr5:92919100..92919135,+!p3@NR2F1!0.53!3.10!NR2F1;;chr19:58341656..58341694,+!p5@ZNF587!0.52!2.96!ZNF587;;chr19:13213511..13213545,-!p2@LYL1!0.52!2.56!LYL1;;chr11:113930401..113930422,+!p3@ZBTB16!0.52!2.29!ZBTB16;;chr3:169381183..169381205,-!p4@MECOM!0.52!2.29!MECOM;;chr5:124082322..124082364,-!p1@ZNF608!0.51!7.00!ZNF608;;chr12:104531823..104531849,-!p5@NFYB!0.51!5.52!NFYB;;chr2:85980951..85981004,+!p1@ATOH8!0.51!4.18!ATOH8;;chr20:48599506..48599526,+!p1@SNAI1!0.50!17.92!SNAI1;;chr19:35455110..35455149,-!p1@ZNF792!0.50!4.98!ZNF792;;chr9:14313893..14313908,-!p7@NFIB!0.50!3.50!NFIB;;chr4:174451350..174451363,-!p3@HAND2!0.50!2.16!HAND2;;chr8:77593750..77593757,+!p3@ZFHX4!0.50!2.16!ZFHX4;;chr3:187463179..187463201,-!p2@BCL6!0.49!11.05!BCL6;;chr18:19749517..19749531,+!p3@GATA6!0.49!4.31!GATA6;;chr15:57511609..57511651,+!p2@TCF12!0.49!4.04!TCF12;;chr12:66218378..66218401,+!p6@HMGA2!0.49!3.64!HMGA2;;chr20:30193083..30193098,+!p1@ID1!0.48!222.81!ID1;;chr1:23886132..23886156,-!p2@ID3!0.48!2.42!ID3;;chr3:170076223..170076242,+!p6@SKIL!0.48!2.42!SKIL;;chr19:46800289..46800327,+!p2@HIF3A!0.48!2.02!HIF3A;;chr12:66218904..66218913,+!p11@HMGA2!0.48!2.02!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.48!2.02!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.48!2.02!HMGA2;;chr14:74256787..74256858,-!p6@C14orf43!0.48!2.02!C14orf43;;chr5:172662197..172662216,-!p1@NKX2-5!0.48!2.02!NKX2-5;;chr2:70142232..70142251,+!p1@MXD1!0.47!14.41!MXD1;;chr4:10458982..10459007,-!p2@ZNF518B!0.47!8.22!ZNF518B;;chr1:8926441..8926473,-!p10@ENO1!0.47!3.37!ENO1;;chr1:158979792..158979814,+!p2@IFI16!0.46!24.65!IFI16;;chr2:214015111..214015179,-!p1@IKZF2!0.46!4.04!IKZF2;;chr15:96876966..96877017,+!p12@NR2F2!0.46!3.10!NR2F2;;chr2:46602901..46602926,+!p7@EPAS1!0.46!2.83!EPAS1;;chr3:141087562..141087594,+!p12@ZBTB38!0.46!1.89!ZBTB38;;chr1:40105299..40105326,-!p1@HEYL!0.46!1.89!HEYL;;chr11:32457075..32457095,-!p1@WT1!0.46!1.89!WT1;;chr9:14314066..14314075,-!p11@NFIB!0.46!1.89!NFIB;;chr6:144329384..144329405,-!p1@PLAGL1!0.45!29.50!PLAGL1;;chr15:37392724..37392757,-!p1@MEIS2!0.45!11.18!MEIS2;;chr12:3069037..3069119,+!p2@TEAD4!0.45!8.22!TEAD4;;chr2:231280954..231280965,+!p2@SP100!0.45!4.04!SP100;;chr9:14314106..14314119,-!p5@NFIB!0.45!3.91!NFIB;;chr19:53496768..53496799,-!p1@ZNF702P!0.45!3.23!ZNF702P;;chr16:86544113..86544145,+!p1@FOXF1!0.45!2.42!FOXF1;;chr11:46299186..46299195,+!p3@CREB3L1!0.45!2.16!CREB3L1;;chr6:34204921..34204939,+!p3@HMGA1!0.44!75.17!HMGA1;;chr21:47063625..47063658,+!p1@PCBP3!0.44!10.24!PCBP3;;chr1:8934931..8934947,-!p4@ENO1!0.44!7.68!ENO1;;chrX:106960221..106960236,-!p3@TSC22D3!0.44!6.33!TSC22D3;;chr3:12329358..12329393,+!p3@PPARG!0.44!5.52!PPARG;;chr2:45236540..45236577,-!p1@SIX2!0.44!1.75!SIX2;;chr18:53068982..53068993,-!p20@TCF4!0.44!1.75!TCF4;;chr11:128562372..128562397,+!p4@FLI1!0.44!1.75!FLI1;;chr12:115122318..115122331,-!p2@TBX3!0.44!1.75!TBX3;;chr9:14083091..14083096,-!p12@NFIB!0.44!1.75!NFIB;;chr20:42602000..42602034,+!p5@TOX2!0.44!1.75!TOX2;;chr10:63809013..63809041,+!p3@ARID5B!0.43!13.07!ARID5B;;chr19:58220517..58220583,-!p1@ZNF154!0.43!7.14!ZNF154;;chr5:158526917..158526932,-!p1@EBF1!0.43!5.39!EBF1;;chr16:8962202..8962222,-!p3@CARHSP1!0.43!3.64!CARHSP1;;chr9:73028598..73028617,-!p5@KLF9!0.43!3.50!KLF9;;chr20:50721803..50721857,-!p2@ZFP64!0.43!3.10!ZFP64;;chr5:92919068..92919082,+!p5@NR2F1!0.43!2.16!NR2F1;;chr10:63809106..63809127,+!p1@ARID5B!0.42!31.66!ARID5B;;chr7:149470641..149470694,-!p1@ZNF467!0.42!10.24!ZNF467;;chr11:128392273..128392308,-!p2@ETS1!0.42!9.43!ETS1;;chr12:57504975..57505019,-!p2@STAT6!0.42!9.03!STAT6;;chr6:10412600..10412637,-!p1@TFAP2A!0.42!3.23!TFAP2A;;chr7:100076723..100076737,-!p3@TSC22D4!0.42!3.10!TSC22D4;;chr17:41623009..41623053,-!p4@ETV4!0.42!3.10!ETV4;;chr6:126240442..126240459,+!p4@NCOA7!0.42!2.29!NCOA7;;chr8:106330696..106330719,+!p2@ZFPM2!0.42!2.29!ZFPM2;;chr7:35293665..35293680,-!p2@TBX20!0.42!1.62!TBX20;;chr1:170633194..170633205,+!p18@PRRX1!0.42!1.62!PRRX1;;chr9:14314946..14314983,-!p8@NFIB!0.42!1.62!NFIB;;chrX:107018836..107018862,-!p8@TSC22D3!0.42!1.62!TSC22D3;;chr15:83953373..83953386,-!p2@BNC1!0.42!1.62!BNC1;;chr6:126112074..126112144,+!p1@NCOA7!0.41!30.98!NCOA7;;chr12:115121962..115121987,-!p1@TBX3!0.41!18.99!TBX3;;chr17:1958388..1958404,+!p1@HIC1!0.41!14.41!HIC1;;chr21:40177892..40177903,+!p2@ETS2!0.41!8.76!ETS2;;chr18:53257027..53257052,-!p3@TCF4!0.41!8.62!TCF4;;chr1:8483878..8483907,-!p4@RERE!0.41!8.49!RERE;;chr7:17338324..17338341,+!p3@AHR!0.41!7.14!AHR;;chr9:14314522..14314556,-!p3@NFIB!0.41!4.71!NFIB;;chr15:37390850..37390909,-!p3@MEIS2!0.41!3.91!MEIS2;;chr1:120190786..120190915,-!p1@ZNF697!0.40!15.76!ZNF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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002548;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=RXR{A,B,G}:1.30617411603;NKX2-2,8:0.933520725477;TLX1..3_NFIC{dimer}:0.925942733281;EN1,2:0.900967696267;ALX1:0.900503240457;XCPE1{core}:0.897688604735;IKZF1:0.888176772279;NR3C1:0.850086001353;TFAP4:0.824997937771;UFEwm:0.817680481627;NKX3-1:0.811509920285;CDC5L:0.809179361303;ALX4:0.799397888443;RXRA_VDR{dimer}:0.747559917536;AR:0.730882216388;XBP1:0.708348201019;EBF1:0.697891927047;NANOG{mouse}:0.683980957516;EVI1:0.680632728216;HIF1A:0.645238091965;NFATC1..3:0.636186952924;POU3F1..4:0.631365625924;SOX17:0.607570316073;ONECUT1,2:0.553655826197;GLI1..3:0.533946103658;TEAD1:0.52563971083;PAX5:0.496094600873;GFI1B:0.494622762611;FOXD3:0.476585947298;ELF1,2,4:0.46678264471;HOX{A5,B5}:0.440537448615;AIRE:0.433192697262;GTF2A1,2:0.423056642002;TP53:0.418419832215;MAFB:0.413944253972;PATZ1:0.412797616105;MYBL2:0.404021394007;MTE{core}:0.400137392943;ZNF238:0.386287432515;RBPJ:0.370126681144;TFDP1:0.365084900391;TBX4,5:0.358657223067;POU1F1:0.356433008616;TAL1_TCF{3,4,12}:0.348530495541;MAZ:0.345198145642;HMGA1,2:0.341543967536;SP1:0.337405289203;TFAP2{A,C}:0.331229906682;HES1:0.326031485289;GTF2I:0.324324347495;BPTF:0.32117352274;GFI1:0.31945429067;NFE2L1:0.316008447993;TOPORS:0.313293883707;SOX2:0.308637781524;HBP1_HMGB_SSRP1_UBTF:0.298795102242;SOX{8,9,10}:0.295580307472;ELK1,4_GABP{A,B1}:0.288509838267;TFAP2B:0.288233446998;ZNF143:0.278346526203;bHLH_family:0.274433739324;PAX1,9:0.274167938197;EGR1..3:0.2631214854;CRX:0.25988819218;CEBPA,B_DDIT3:0.243557203128;HSF1,2:0.223396106023;FOX{I1,J2}:0.222671651869;ZFP161:0.205041317086;LHX3,4:0.190374540772;PAX8:0.189999731609;HIC1:0.185413690018;ZIC1..3:0.184713122879;PRDM1:0.183637195165;TEF:0.165386632371;MZF1:0.147442772418;NFE2L2:0.13936858711;STAT2,4,6:0.136531624522;SPZ1:0.131737876946;SRF:0.125046375112;ZNF148:0.11948797892;CDX1,2,4:0.11408160418;GATA4:0.110325067649;ARID5B:0.109356426302;HLF:0.107509801718;PPARG:0.105464959624;NRF1:0.105277450646;ADNP_IRX_SIX_ZHX:0.0908255911698;NHLH1,2:0.0868608858238;LEF1_TCF7_TCF7L1,2:0.0861752658476;AHR_ARNT_ARNT2:0.085669283395;ZBTB6:0.0847058281538;SMAD1..7,9:0.0841839885364;REST:0.0765721698954;NFIX:0.0764742512502;GZF1:0.0736245065593;TLX2:0.0659009473929;NKX2-1,4:0.058725212923;MYB:0.0567156522481;ZBTB16:0.0416040445105;NR5A1,2:0.0356567294184;TFCP2:0.0275837061998;FOXP1:0.0198076659513;YY1:0.0136546683055;STAT1,3:0.0115406506399;GATA6:0.00344255063012;BACH2:-0.0139229699991;TBP:-0.0250546705921;STAT5{A,B}:-0.0256918654008;ETS1,2:-0.0361901736986;ZNF384:-0.0563053197159;ESR1:-0.0611273933317;KLF4:-0.0905564157522;NFKB1_REL_RELA:-0.0907670747717;HNF4A_NR2F1,2:-0.0921112050737;E2F1..5:-0.103196559337;ZNF423:-0.107755849279;ATF4:-0.112439542764;NFY{A,B,C}:-0.114195535863;FOS_FOS{B,L1}_JUN{B,D}:-0.11979160693;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.120166233932;NFE2:-0.121010577595;MED-1{core}:-0.121789390595;HNF1A:-0.123020292606;PAX3,7:-0.142493054659;PAX4:-0.144518138074;SPI1:-0.146428306558;PBX1:-0.147877183861;PAX6:-0.15980435886;FOXP3:-0.169373424008;SREBF1,2:-0.171320885532;FOSL2:-0.171386409426;FOXL1:-0.181103216756;NR6A1:-0.204662880003;SOX5:-0.220137345471;IKZF2:-0.221416457739;CUX2:-0.221471401521;PITX1..3:-0.234211888108;SPIB:-0.237401377613;MTF1:-0.241333956414;IRF7:-0.25051053771;ESRRA:-0.260237079365;PDX1:-0.264698486606;FOX{D1,D2}:-0.266589221937;HMX1:-0.272580230643;TGIF1:-0.277600722754;PAX2:-0.285630960238;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.295060529961;BREu{core}:-0.324179391662;ATF6:-0.325440706837;PRRX1,2:-0.335029593171;HOXA9_MEIS1:-0.348029785111;DBP:-0.349819458016;MEF2{A,B,C,D}:-0.353289705406;MYFfamily:-0.380934853782;RFX1:-0.397326782347;HOX{A4,D4}:-0.399051960321;FOX{F1,F2,J1}:-0.399134022245;NKX6-1,2:-0.402935364438;POU2F1..3:-0.404039087532;FOXN1:-0.409693629044;FOXO1,3,4:-0.416642252115;NKX3-2:-0.422699500541;ATF2:-0.42764894176;LMO2:-0.435383526801;FOXA2:-0.462869078665;POU6F1:-0.466874964756;DMAP1_NCOR{1,2}_SMARC:-0.479185013048;JUN:-0.487137625997;GCM1,2:-0.494613266076;ATF5_CREB3:-0.496229292445;RUNX1..3:-0.50262843996;HAND1,2:-0.508577338369;IRF1,2:-0.512920409889;CREB1:-0.514149162213;NR1H4:-0.519019457491;POU5F1:-0.545747149282;T:-0.558767174127;OCT4_SOX2{dimer}:-0.562785060267;NFIL3:-0.580454294619;MYOD1:-0.601512548979;RORA:-0.62455874376;FOXM1:-0.642444059544;RREB1:-0.652361129993;FOXQ1:-0.67330722704;EP300:-0.674727922325;RFX2..5_RFXANK_RFXAP:-0.799718940461;NANOG:-0.85926672363;NKX2-3_NKX2-5:-0.875479699727;SNAI1..3:-0.882439674838;ZEB1:-0.902032586901;VSX1,2:-0.965606892076;HOX{A6,A7,B6,B7}:-1.68051941317
|comment=
|created_by=tmeehan
|creation_date=2011-06-15T12:34:29Z
|def="A fibroblast from cardiac tissue." [GOC:tfm]
|has_quality=
|has_quality=
|is_a=EFO:0002091;;FF:0000002;;FF:0000059;;FF:0000210
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|rna_box=119
|rna_catalog_number=SC6305
|rna_concentration=0.67
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=2832
|rna_od260/230=
|rna_od260/280=
|rna_position=A7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=119A7
|rna_weight_ug=10
|sample_age=fetal
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=fibroblast
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=fetus
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.5576168598458e-237!GO:0005737;cytoplasm;1.66802376912142e-197!GO:0043226;organelle;2.94857896944974e-184!GO:0043229;intracellular organelle;8.75124631445265e-184!GO:0043231;intracellular membrane-bound organelle;2.44921282282085e-180!GO:0043227;membrane-bound organelle;3.18630447140812e-180!GO:0044444;cytoplasmic part;1.36159251363109e-138!GO:0044422;organelle part;1.2340114247983e-132!GO:0044446;intracellular organelle part;4.77225444300249e-131!GO:0044238;primary metabolic process;4.44387341829272e-91!GO:0032991;macromolecular complex;2.44345640106992e-90!GO:0044237;cellular metabolic process;9.5824203085162e-90!GO:0005515;protein binding;1.06310838149682e-87!GO:0043170;macromolecule metabolic process;2.28319499182782e-81!GO:0030529;ribonucleoprotein complex;1.04412832588127e-80!GO:0003723;RNA binding;2.60110986346514e-66!GO:0043233;organelle lumen;2.60110986346514e-66!GO:0031974;membrane-enclosed lumen;2.60110986346514e-66!GO:0005634;nucleus;1.89287716373845e-65!GO:0005739;mitochondrion;1.03675982063923e-64!GO:0044428;nuclear part;4.9780429640037e-61!GO:0019538;protein metabolic process;7.49450976975187e-57!GO:0031090;organelle membrane;4.49291914940187e-52!GO:0006412;translation;4.91881722004359e-51!GO:0044260;cellular macromolecule metabolic process;9.35405441579222e-51!GO:0016043;cellular component organization and biogenesis;1.70287703588294e-50!GO:0005840;ribosome;2.38761596881835e-50!GO:0044267;cellular protein metabolic process;3.01594961246221e-50!GO:0009058;biosynthetic process;1.04786960498365e-45!GO:0043234;protein complex;2.9140817081278e-45!GO:0003735;structural constituent of ribosome;1.16599055233869e-44!GO:0015031;protein transport;2.6179436789949e-44!GO:0033036;macromolecule localization;3.21412592640095e-44!GO:0006396;RNA processing;1.10298284520105e-43!GO:0044429;mitochondrial part;2.23790018302881e-43!GO:0043283;biopolymer metabolic process;1.51554176974694e-42!GO:0044249;cellular biosynthetic process;1.78064894221321e-41!GO:0009059;macromolecule biosynthetic process;2.14201302531716e-41!GO:0008104;protein localization;4.22745603441993e-41!GO:0045184;establishment of protein localization;9.79579517227091e-41!GO:0005829;cytosol;1.03358457913773e-40!GO:0033279;ribosomal subunit;2.00199394465702e-40!GO:0031967;organelle envelope;3.20222591333431e-40!GO:0031975;envelope;6.317583200503e-40!GO:0031981;nuclear lumen;8.9560405942034e-38!GO:0010467;gene expression;3.59573508326053e-37!GO:0046907;intracellular transport;2.28625382558796e-36!GO:0016071;mRNA metabolic process;1.82181432129629e-34!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.74741407134276e-33!GO:0065003;macromolecular complex assembly;5.33908540790928e-33!GO:0008380;RNA splicing;8.32533727205794e-33!GO:0006996;organelle organization and biogenesis;4.20099602881899e-31!GO:0043228;non-membrane-bound organelle;1.44620663361995e-30!GO:0043232;intracellular non-membrane-bound organelle;1.44620663361995e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.43277040991978e-30!GO:0006886;intracellular protein transport;3.85092891746025e-30!GO:0006397;mRNA processing;2.89758000972706e-29!GO:0022607;cellular component assembly;4.93701059565468e-29!GO:0005740;mitochondrial envelope;5.8255234427233e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.91767626002621e-29!GO:0031966;mitochondrial membrane;2.69397758626003e-27!GO:0019866;organelle inner membrane;1.72805180792735e-26!GO:0005743;mitochondrial inner membrane;2.22003367032985e-24!GO:0044445;cytosolic part;3.68922524775814e-24!GO:0000166;nucleotide binding;9.19659714894342e-24!GO:0051649;establishment of cellular localization;9.562715127479e-24!GO:0051641;cellular localization;1.14809942210335e-23!GO:0005654;nucleoplasm;2.73764862325085e-23!GO:0006119;oxidative phosphorylation;7.69760391944061e-23!GO:0012505;endomembrane system;2.62668371080703e-22!GO:0005681;spliceosome;5.09783381960631e-22!GO:0005783;endoplasmic reticulum;4.1421971054561e-21!GO:0015934;large ribosomal subunit;8.30435518654018e-21!GO:0015935;small ribosomal subunit;1.20371056390409e-20!GO:0006259;DNA metabolic process;1.41467964185683e-20!GO:0006457;protein folding;2.03967414170838e-20!GO:0016462;pyrophosphatase activity;3.6023015789675e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.90134961530287e-20!GO:0044455;mitochondrial membrane part;6.39322479786745e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;8.33506813029386e-20!GO:0017111;nucleoside-triphosphatase activity;1.11118473803533e-19!GO:0007049;cell cycle;1.7297846586731e-19!GO:0005794;Golgi apparatus;7.25918571716425e-19!GO:0044451;nucleoplasm part;9.16046674082527e-19!GO:0003676;nucleic acid binding;9.42845341831377e-19!GO:0048770;pigment granule;1.38897246882232e-18!GO:0042470;melanosome;1.38897246882232e-18!GO:0022618;protein-RNA complex assembly;3.15788441807876e-18!GO:0031980;mitochondrial lumen;5.61143767521702e-18!GO:0005759;mitochondrial matrix;5.61143767521702e-18!GO:0032553;ribonucleotide binding;2.81648545457278e-17!GO:0032555;purine ribonucleotide binding;2.81648545457278e-17!GO:0005746;mitochondrial respiratory chain;2.9772961527452e-17!GO:0006512;ubiquitin cycle;3.77224195211471e-17!GO:0017076;purine nucleotide binding;5.38079253467244e-17!GO:0044432;endoplasmic reticulum part;6.24138887064164e-17!GO:0016874;ligase activity;7.5183824871553e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.09443558113239e-16!GO:0008134;transcription factor binding;1.18089096391265e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.39659315280117e-16!GO:0044265;cellular macromolecule catabolic process;1.69846402477992e-16!GO:0019941;modification-dependent protein catabolic process;2.64666023159799e-16!GO:0043632;modification-dependent macromolecule catabolic process;2.64666023159799e-16!GO:0006511;ubiquitin-dependent protein catabolic process;3.52592696823731e-16!GO:0051186;cofactor metabolic process;3.92369879108118e-16!GO:0044257;cellular protein catabolic process;4.18359435922551e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.14999216100171e-16!GO:0000502;proteasome complex (sensu Eukaryota);6.4565067699166e-16!GO:0043285;biopolymer catabolic process;6.49352799890915e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.15776923847024e-15!GO:0003954;NADH dehydrogenase activity;1.15776923847024e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.15776923847024e-15!GO:0016192;vesicle-mediated transport;1.28774500985338e-15!GO:0043412;biopolymer modification;2.4815351628175e-15!GO:0006605;protein targeting;2.50825309421471e-15!GO:0005730;nucleolus;3.70626071543345e-15!GO:0048193;Golgi vesicle transport;3.80152871359379e-15!GO:0022402;cell cycle process;4.58029860021836e-15!GO:0008135;translation factor activity, nucleic acid binding;4.86532749435166e-15!GO:0030163;protein catabolic process;6.44619923428098e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.5469327444448e-15!GO:0009057;macromolecule catabolic process;7.09563229673879e-15!GO:0016070;RNA metabolic process;1.37326000671783e-14!GO:0000278;mitotic cell cycle;2.29649214430467e-14!GO:0005761;mitochondrial ribosome;4.0056573354374e-14!GO:0000313;organellar ribosome;4.0056573354374e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.89196544960841e-14!GO:0006464;protein modification process;5.11104910016398e-14!GO:0042775;organelle ATP synthesis coupled electron transport;5.90004856301134e-14!GO:0042773;ATP synthesis coupled electron transport;5.90004856301134e-14!GO:0030964;NADH dehydrogenase complex (quinone);6.9470733352e-14!GO:0045271;respiratory chain complex I;6.9470733352e-14!GO:0005747;mitochondrial respiratory chain complex I;6.9470733352e-14!GO:0044248;cellular catabolic process;8.86889301363585e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.01680302952129e-13!GO:0005524;ATP binding;2.46075693529688e-13!GO:0012501;programmed cell death;2.62232768927138e-13!GO:0032559;adenyl ribonucleotide binding;4.08079431419476e-13!GO:0051082;unfolded protein binding;5.23667564651716e-13!GO:0006915;apoptosis;7.76211534406448e-13!GO:0030554;adenyl nucleotide binding;1.05721007972781e-12!GO:0006732;coenzyme metabolic process;1.24887221109917e-12!GO:0003743;translation initiation factor activity;2.85872392969397e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;3.02366681693039e-12!GO:0000375;RNA splicing, via transesterification reactions;3.02366681693039e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.02366681693039e-12!GO:0008219;cell death;3.85147679769794e-12!GO:0016265;death;3.85147679769794e-12!GO:0006974;response to DNA damage stimulus;5.07113037176035e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.18440600595483e-12!GO:0005635;nuclear envelope;6.25890139107021e-12!GO:0006413;translational initiation;6.60878770271405e-12!GO:0043687;post-translational protein modification;1.21512934678179e-11!GO:0003712;transcription cofactor activity;1.38456052902939e-11!GO:0005789;endoplasmic reticulum membrane;1.57825033594285e-11!GO:0005793;ER-Golgi intermediate compartment;1.66179269552669e-11!GO:0042254;ribosome biogenesis and assembly;1.76441266875339e-11!GO:0009055;electron carrier activity;2.4595821749522e-11!GO:0048523;negative regulation of cellular process;3.19632980700391e-11!GO:0031965;nuclear membrane;4.52496086713885e-11!GO:0016604;nuclear body;1.09173792853813e-10!GO:0044453;nuclear membrane part;1.46664828062902e-10!GO:0006913;nucleocytoplasmic transport;1.9780327350875e-10!GO:0006446;regulation of translational initiation;2.0788889678365e-10!GO:0050794;regulation of cellular process;2.80777299378416e-10!GO:0008565;protein transporter activity;2.90642898237257e-10!GO:0006461;protein complex assembly;3.13474153111332e-10!GO:0051726;regulation of cell cycle;3.8280162655878e-10!GO:0051169;nuclear transport;4.22100931075397e-10!GO:0000074;regulation of progression through cell cycle;4.36952859669068e-10!GO:0009259;ribonucleotide metabolic process;5.47192047024361e-10!GO:0000087;M phase of mitotic cell cycle;5.73286408332898e-10!GO:0006163;purine nucleotide metabolic process;6.4963656785728e-10!GO:0007067;mitosis;8.56177527003445e-10!GO:0009150;purine ribonucleotide metabolic process;1.59293152411306e-09!GO:0051276;chromosome organization and biogenesis;1.74410580376124e-09!GO:0048519;negative regulation of biological process;1.87574432321921e-09!GO:0008639;small protein conjugating enzyme activity;2.05204462901007e-09!GO:0051246;regulation of protein metabolic process;2.06135084325496e-09!GO:0006366;transcription from RNA polymerase II promoter;2.06757231025318e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.07937671355711e-09!GO:0016887;ATPase activity;2.19216940954687e-09!GO:0051301;cell division;2.30659729118963e-09!GO:0006281;DNA repair;2.72724998274131e-09!GO:0005694;chromosome;3.25175392982961e-09!GO:0004842;ubiquitin-protein ligase activity;3.66217967132644e-09!GO:0042623;ATPase activity, coupled;3.76378647372984e-09!GO:0022403;cell cycle phase;3.87108648603291e-09!GO:0006399;tRNA metabolic process;4.47210223436149e-09!GO:0006164;purine nucleotide biosynthetic process;5.25147478548394e-09!GO:0003924;GTPase activity;5.25396768823015e-09!GO:0009199;ribonucleoside triphosphate metabolic process;5.51548301348234e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.04566303561493e-09!GO:0009719;response to endogenous stimulus;7.15108506235139e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;7.92631514400783e-09!GO:0019787;small conjugating protein ligase activity;8.02525981255659e-09!GO:0009141;nucleoside triphosphate metabolic process;1.00715988246815e-08!GO:0004386;helicase activity;1.02833939962459e-08!GO:0017038;protein import;1.12998544343944e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.22984314939944e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.22984314939944e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.26364619987355e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.26364619987355e-08!GO:0051188;cofactor biosynthetic process;1.27287559143381e-08!GO:0009260;ribonucleotide biosynthetic process;1.27287559143381e-08!GO:0044427;chromosomal part;1.34089646285158e-08!GO:0016607;nuclear speck;1.38490156450124e-08!GO:0009056;catabolic process;1.4057625849835e-08!GO:0009060;aerobic respiration;1.51058267982043e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.55944131472332e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.21753047840347e-08!GO:0006793;phosphorus metabolic process;2.30718418658312e-08!GO:0006796;phosphate metabolic process;2.30718418658312e-08!GO:0006323;DNA packaging;2.5867539239928e-08!GO:0015986;ATP synthesis coupled proton transport;2.75195005117863e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.75195005117863e-08!GO:0065004;protein-DNA complex assembly;3.49746551296459e-08!GO:0045333;cellular respiration;3.62197075215153e-08!GO:0005643;nuclear pore;3.82423024897957e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.27766718517959e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.27766718517959e-08!GO:0044431;Golgi apparatus part;4.41347117904536e-08!GO:0008026;ATP-dependent helicase activity;4.98820170732738e-08!GO:0005788;endoplasmic reticulum lumen;5.13122153357848e-08!GO:0005768;endosome;5.49595535844446e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.95252270390469e-08!GO:0004812;aminoacyl-tRNA ligase activity;5.95252270390469e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.95252270390469e-08!GO:0015630;microtubule cytoskeleton;7.37419099450554e-08!GO:0046034;ATP metabolic process;7.51209770941883e-08!GO:0016881;acid-amino acid ligase activity;7.51682506861434e-08!GO:0043067;regulation of programmed cell death;8.26494239760794e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.538751643758e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.538751643758e-08!GO:0043069;negative regulation of programmed cell death;1.08038945362185e-07!GO:0016310;phosphorylation;1.13930293803835e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.15310272493577e-07!GO:0042981;regulation of apoptosis;1.15637942696487e-07!GO:0043038;amino acid activation;1.2014176494906e-07!GO:0006418;tRNA aminoacylation for protein translation;1.2014176494906e-07!GO:0043039;tRNA aminoacylation;1.2014176494906e-07!GO:0046930;pore complex;1.39717867043074e-07!GO:0065002;intracellular protein transport across a membrane;1.42543905007755e-07!GO:0006333;chromatin assembly or disassembly;1.68161992535603e-07!GO:0006364;rRNA processing;1.86146391917476e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.86146391917476e-07!GO:0019829;cation-transporting ATPase activity;2.29797221739978e-07!GO:0043066;negative regulation of apoptosis;2.29816124741038e-07!GO:0050789;regulation of biological process;2.4169284373001e-07!GO:0006099;tricarboxylic acid cycle;2.57051748784612e-07!GO:0046356;acetyl-CoA catabolic process;2.57051748784612e-07!GO:0030120;vesicle coat;2.90909694251051e-07!GO:0030662;coated vesicle membrane;2.90909694251051e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.32281677216775e-07!GO:0009117;nucleotide metabolic process;3.32512563803788e-07!GO:0051187;cofactor catabolic process;3.39188794313056e-07!GO:0000785;chromatin;3.78586488301709e-07!GO:0016072;rRNA metabolic process;4.36161554576501e-07!GO:0009109;coenzyme catabolic process;4.90062240429558e-07!GO:0006260;DNA replication;5.06771748370526e-07!GO:0006754;ATP biosynthetic process;5.2825501710734e-07!GO:0006753;nucleoside phosphate metabolic process;5.2825501710734e-07!GO:0016740;transferase activity;5.70518965810795e-07!GO:0048475;coated membrane;6.1539880420622e-07!GO:0030117;membrane coat;6.1539880420622e-07!GO:0006916;anti-apoptosis;6.55689799778532e-07!GO:0016491;oxidoreductase activity;7.49355155781841e-07!GO:0003714;transcription corepressor activity;8.01632514029146e-07!GO:0005525;GTP binding;8.01632514029146e-07!GO:0009108;coenzyme biosynthetic process;8.24205844640667e-07!GO:0050657;nucleic acid transport;8.8960590006815e-07!GO:0051236;establishment of RNA localization;8.8960590006815e-07!GO:0050658;RNA transport;8.8960590006815e-07!GO:0016853;isomerase activity;9.00459116023213e-07!GO:0000279;M phase;9.45330818197002e-07!GO:0006403;RNA localization;9.68512748394487e-07!GO:0006084;acetyl-CoA metabolic process;9.77687674580711e-07!GO:0031252;leading edge;1.17939106114235e-06!GO:0031988;membrane-bound vesicle;1.46842389069689e-06!GO:0045786;negative regulation of progression through cell cycle;1.58660415677851e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.639828609026e-06!GO:0051170;nuclear import;1.69455347520787e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.84725327448787e-06!GO:0016564;transcription repressor activity;1.8561773428307e-06!GO:0007005;mitochondrion organization and biogenesis;1.87589525930551e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.93897745912692e-06!GO:0000139;Golgi membrane;2.35182707237872e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.54039984652656e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.79333002343014e-06!GO:0006334;nucleosome assembly;2.80889090811868e-06!GO:0045259;proton-transporting ATP synthase complex;2.98729575069206e-06!GO:0006752;group transfer coenzyme metabolic process;3.52190240129393e-06!GO:0006606;protein import into nucleus;3.75445564216657e-06!GO:0030036;actin cytoskeleton organization and biogenesis;3.83136762537192e-06!GO:0005813;centrosome;3.97401381489696e-06!GO:0005667;transcription factor complex;4.24351219545788e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.76903795747848e-06!GO:0003697;single-stranded DNA binding;4.81436682187311e-06!GO:0032446;protein modification by small protein conjugation;4.99600425371117e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.07505049024332e-06!GO:0005770;late endosome;5.23936044909744e-06!GO:0000245;spliceosome assembly;5.46704956885433e-06!GO:0008654;phospholipid biosynthetic process;5.53501390215035e-06!GO:0016859;cis-trans isomerase activity;5.85647219512909e-06!GO:0032561;guanyl ribonucleotide binding;7.31997728381148e-06!GO:0019001;guanyl nucleotide binding;7.31997728381148e-06!GO:0016567;protein ubiquitination;8.21804120317473e-06!GO:0006613;cotranslational protein targeting to membrane;8.26503302513062e-06!GO:0005762;mitochondrial large ribosomal subunit;8.93483562022011e-06!GO:0000315;organellar large ribosomal subunit;8.93483562022011e-06!GO:0004298;threonine endopeptidase activity;1.00205608175411e-05!GO:0007010;cytoskeleton organization and biogenesis;1.08505721638118e-05!GO:0031324;negative regulation of cellular metabolic process;1.08505721638118e-05!GO:0044440;endosomal part;1.23324651645977e-05!GO:0010008;endosome membrane;1.23324651645977e-05!GO:0005773;vacuole;1.24512493404152e-05!GO:0031497;chromatin assembly;1.26836768163381e-05!GO:0031982;vesicle;1.31329198486411e-05!GO:0043566;structure-specific DNA binding;1.37357948301505e-05!GO:0007243;protein kinase cascade;1.50638913818098e-05!GO:0005798;Golgi-associated vesicle;1.54390645808373e-05!GO:0005815;microtubule organizing center;1.62491163386021e-05!GO:0016787;hydrolase activity;1.72004147340175e-05!GO:0003713;transcription coactivator activity;1.77290747603382e-05!GO:0043623;cellular protein complex assembly;1.7944150411135e-05!GO:0051028;mRNA transport;1.86807515297196e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.90897067055134e-05!GO:0045454;cell redox homeostasis;2.00780999880576e-05!GO:0048522;positive regulation of cellular process;2.05668597855257e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.28368237806324e-05!GO:0031410;cytoplasmic vesicle;2.31464943474166e-05!GO:0000151;ubiquitin ligase complex;2.51116890180744e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.16518083903923e-05!GO:0030029;actin filament-based process;3.27450475318637e-05!GO:0016563;transcription activator activity;3.28509296355437e-05!GO:0003724;RNA helicase activity;3.49343247654741e-05!GO:0019899;enzyme binding;3.54939572592242e-05!GO:0030867;rough endoplasmic reticulum membrane;3.6033183217924e-05!GO:0031968;organelle outer membrane;4.1317662747511e-05!GO:0019843;rRNA binding;4.15793889848682e-05!GO:0016044;membrane organization and biogenesis;5.13261220187639e-05!GO:0016779;nucleotidyltransferase activity;5.173823786932e-05!GO:0005769;early endosome;5.6092205414247e-05!GO:0019867;outer membrane;6.22120483526351e-05!GO:0008092;cytoskeletal protein binding;6.42868811162983e-05!GO:0006091;generation of precursor metabolites and energy;7.03501415715056e-05!GO:0009892;negative regulation of metabolic process;7.59835150978819e-05!GO:0015980;energy derivation by oxidation of organic compounds;8.42072233877267e-05!GO:0000323;lytic vacuole;9.51725925812095e-05!GO:0005764;lysosome;9.51725925812095e-05!GO:0051789;response to protein stimulus;9.90080137600873e-05!GO:0006986;response to unfolded protein;9.90080137600873e-05!GO:0051329;interphase of mitotic cell cycle;0.000115168068516016!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000118960343698893!GO:0016568;chromatin modification;0.000124785237802388!GO:0008361;regulation of cell size;0.00012603243112361!GO:0005741;mitochondrial outer membrane;0.000130068299912663!GO:0043021;ribonucleoprotein binding;0.000141791547020087!GO:0016049;cell growth;0.000148618016104303!GO:0005048;signal sequence binding;0.000149383349218822!GO:0005819;spindle;0.000162140431688712!GO:0005905;coated pit;0.000187815643536881!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000201898327944841!GO:0051427;hormone receptor binding;0.000201898327944841!GO:0033116;ER-Golgi intermediate compartment membrane;0.000225642699815278!GO:0000314;organellar small ribosomal subunit;0.000232458390987723!GO:0005763;mitochondrial small ribosomal subunit;0.000232458390987723!GO:0051325;interphase;0.000244216341699468!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000258976206360321!GO:0065007;biological regulation;0.000283851518595503!GO:0006612;protein targeting to membrane;0.000296376824553512!GO:0009165;nucleotide biosynthetic process;0.000313376762511196!GO:0005885;Arp2/3 protein complex;0.000316908501288014!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000343687254962809!GO:0001558;regulation of cell growth;0.000359343442974281!GO:0007264;small GTPase mediated signal transduction;0.000370643103795382!GO:0004576;oligosaccharyl transferase activity;0.000397406474953807!GO:0008250;oligosaccharyl transferase complex;0.000420344883678785!GO:0035257;nuclear hormone receptor binding;0.000423018776418233!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000467417304012196!GO:0007050;cell cycle arrest;0.000490390329342935!GO:0030133;transport vesicle;0.000490390329342935!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000531129464258458!GO:0019222;regulation of metabolic process;0.000553423684987563!GO:0030663;COPI coated vesicle membrane;0.000553423684987563!GO:0030126;COPI vesicle coat;0.000553423684987563!GO:0016126;sterol biosynthetic process;0.000561035293110923!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000584434657546209!GO:0016481;negative regulation of transcription;0.000640530125842603!GO:0030041;actin filament polymerization;0.000708127911405251!GO:0006950;response to stress;0.000727299560266581!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000731249396413124!GO:0006414;translational elongation;0.000755331519313454!GO:0046474;glycerophospholipid biosynthetic process;0.000755955298092557!GO:0042802;identical protein binding;0.000824919631001052!GO:0006891;intra-Golgi vesicle-mediated transport;0.000840497120334985!GO:0065009;regulation of a molecular function;0.000843765082669226!GO:0003899;DNA-directed RNA polymerase activity;0.000854686031902208!GO:0005791;rough endoplasmic reticulum;0.000930572531397254!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000930572531397254!GO:0044262;cellular carbohydrate metabolic process;0.000967024585986615!GO:0000786;nucleosome;0.000971190221631453!GO:0051920;peroxiredoxin activity;0.000978378534803196!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00101598560102152!GO:0018196;peptidyl-asparagine modification;0.00104905098500451!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00104905098500451!GO:0046467;membrane lipid biosynthetic process;0.00114321902418571!GO:0043681;protein import into mitochondrion;0.00115671314671716!GO:0008047;enzyme activator activity;0.00115671314671716!GO:0008186;RNA-dependent ATPase activity;0.00120327635162406!GO:0030137;COPI-coated vesicle;0.00127456965502256!GO:0051252;regulation of RNA metabolic process;0.00127855257176592!GO:0016197;endosome transport;0.0013094661723898!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00132459188551527!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00132459188551527!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00132459188551527!GO:0008610;lipid biosynthetic process;0.00143453585510033!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00148349523515972!GO:0031072;heat shock protein binding;0.00152333011445902!GO:0000059;protein import into nucleus, docking;0.0015954730465865!GO:0007051;spindle organization and biogenesis;0.00160713166143027!GO:0048518;positive regulation of biological process;0.00167396577785926!GO:0016363;nuclear matrix;0.00170124319101868!GO:0008139;nuclear localization sequence binding;0.00199748715510071!GO:0048500;signal recognition particle;0.00205083947551913!GO:0030027;lamellipodium;0.0020874617063366!GO:0051168;nuclear export;0.00210346378427954!GO:0003729;mRNA binding;0.00222704894194611!GO:0006626;protein targeting to mitochondrion;0.00230387472143368!GO:0045045;secretory pathway;0.00242660153997946!GO:0009967;positive regulation of signal transduction;0.00267931419810896!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00267931419810896!GO:0030176;integral to endoplasmic reticulum membrane;0.00279721506381996!GO:0035258;steroid hormone receptor binding;0.00286274113726372!GO:0007006;mitochondrial membrane organization and biogenesis;0.00292387324251487!GO:0004004;ATP-dependent RNA helicase activity;0.00330868870299816!GO:0051087;chaperone binding;0.00334791570582186!GO:0000075;cell cycle checkpoint;0.0033484059559978!GO:0048471;perinuclear region of cytoplasm;0.00339539199076256!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00343961798440296!GO:0015399;primary active transmembrane transporter activity;0.00343961798440296!GO:0048487;beta-tubulin binding;0.00349702356658622!GO:0006695;cholesterol biosynthetic process;0.00353978205246747!GO:0046489;phosphoinositide biosynthetic process;0.00354473634418789!GO:0015631;tubulin binding;0.0035496971468554!GO:0051128;regulation of cellular component organization and biogenesis;0.00357643158403297!GO:0006509;membrane protein ectodomain proteolysis;0.00361758355492699!GO:0033619;membrane protein proteolysis;0.00361758355492699!GO:0030880;RNA polymerase complex;0.00365427903042764!GO:0030134;ER to Golgi transport vesicle;0.00366953517519727!GO:0048468;cell development;0.00368813391665275!GO:0008154;actin polymerization and/or depolymerization;0.0037101593741988!GO:0000049;tRNA binding;0.00390451789243322!GO:0030521;androgen receptor signaling pathway;0.00390489499708303!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00414402771778539!GO:0045047;protein targeting to ER;0.00414402771778539!GO:0006650;glycerophospholipid metabolic process;0.00414402771778539!GO:0006383;transcription from RNA polymerase III promoter;0.00419251208657637!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00425195866599227!GO:0006417;regulation of translation;0.00443261024815961!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00448901541672352!GO:0005874;microtubule;0.00455670671156182!GO:0005637;nuclear inner membrane;0.00459514320025686!GO:0046483;heterocycle metabolic process;0.00463073808474279!GO:0030132;clathrin coat of coated pit;0.00479224100989344!GO:0008033;tRNA processing;0.00495921277241902!GO:0008312;7S RNA binding;0.00495921277241902!GO:0005684;U2-dependent spliceosome;0.00509883123344092!GO:0017166;vinculin binding;0.00520210974203407!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00524092070981638!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00524092070981638!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00527775272756563!GO:0006402;mRNA catabolic process;0.0055772875721723!GO:0030833;regulation of actin filament polymerization;0.00558842131272672!GO:0003690;double-stranded DNA binding;0.00579635875741269!GO:0051101;regulation of DNA binding;0.0058071963604275!GO:0004674;protein serine/threonine kinase activity;0.00605633474844569!GO:0006839;mitochondrial transport;0.00606200292477565!GO:0030659;cytoplasmic vesicle membrane;0.0063127752658109!GO:0006897;endocytosis;0.00637501610819912!GO:0010324;membrane invagination;0.00637501610819912!GO:0030127;COPII vesicle coat;0.00637501610819912!GO:0012507;ER to Golgi transport vesicle membrane;0.00637501610819912!GO:0006740;NADPH regeneration;0.0064137624579676!GO:0006098;pentose-phosphate shunt;0.0064137624579676!GO:0043284;biopolymer biosynthetic process;0.00652503020103192!GO:0033673;negative regulation of kinase activity;0.0065948572208216!GO:0006469;negative regulation of protein kinase activity;0.0065948572208216!GO:0001726;ruffle;0.00664375292701242!GO:0006261;DNA-dependent DNA replication;0.00665011159510078!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00665011159510078!GO:0040008;regulation of growth;0.00666189451471362!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0067729544924735!GO:0005096;GTPase activator activity;0.00707725539211613!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00736579848486842!GO:0000428;DNA-directed RNA polymerase complex;0.00736579848486842!GO:0030118;clathrin coat;0.00736665611318318!GO:0030658;transport vesicle membrane;0.00758309093837569!GO:0043488;regulation of mRNA stability;0.00789333241307212!GO:0043487;regulation of RNA stability;0.00789333241307212!GO:0008632;apoptotic program;0.00790626164735988!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00794164277562556!GO:0019752;carboxylic acid metabolic process;0.00796585911888273!GO:0006082;organic acid metabolic process;0.00798496905648481!GO:0045941;positive regulation of transcription;0.00825619084035515!GO:0006352;transcription initiation;0.00852968518745664!GO:0004177;aminopeptidase activity;0.00880132276035738!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00895008250443131!GO:0000082;G1/S transition of mitotic cell cycle;0.00904660298410121!GO:0030384;phosphoinositide metabolic process;0.00907921167117679!GO:0045893;positive regulation of transcription, DNA-dependent;0.00916343030130569!GO:0051348;negative regulation of transferase activity;0.00916600628967098!GO:0006979;response to oxidative stress;0.00938142102304753!GO:0003711;transcription elongation regulator activity;0.00947659030564074!GO:0005869;dynactin complex;0.00950049377742677!GO:0051539;4 iron, 4 sulfur cluster binding;0.00993131500392005!GO:0006595;polyamine metabolic process;0.00993131500392005!GO:0051270;regulation of cell motility;0.00998788336824425!GO:0006302;double-strand break repair;0.0101907971254211!GO:0001568;blood vessel development;0.0103328888476552!GO:0031326;regulation of cellular biosynthetic process;0.0107180811754949!GO:0051052;regulation of DNA metabolic process;0.0109568215110104!GO:0008180;signalosome;0.0110376741050852!GO:0022408;negative regulation of cell-cell adhesion;0.0111067069076431!GO:0006892;post-Golgi vesicle-mediated transport;0.011188047302804!GO:0051287;NAD binding;0.011188047302804!GO:0044452;nucleolar part;0.0113170372433624!GO:0009889;regulation of biosynthetic process;0.0113296453244191!GO:0007040;lysosome organization and biogenesis;0.0114696762449873!GO:0005862;muscle thin filament tropomyosin;0.0119878485639957!GO:0016272;prefoldin complex;0.0123986495287407!GO:0045892;negative regulation of transcription, DNA-dependent;0.0124620105872491!GO:0001953;negative regulation of cell-matrix adhesion;0.012924348567114!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0129674329732693!GO:0003678;DNA helicase activity;0.0130014270085138!GO:0000776;kinetochore;0.013022348059987!GO:0044433;cytoplasmic vesicle part;0.0131638324782552!GO:0030518;steroid hormone receptor signaling pathway;0.0131638324782552!GO:0031901;early endosome membrane;0.0131638324782552!GO:0003779;actin binding;0.0131819943758264!GO:0031625;ubiquitin protein ligase binding;0.0131819943758264!GO:0006778;porphyrin metabolic process;0.0132266605716089!GO:0033013;tetrapyrrole metabolic process;0.0132266605716089!GO:0015992;proton transport;0.0133710004536492!GO:0040011;locomotion;0.0133758253073073!GO:0003684;damaged DNA binding;0.0134378188317741!GO:0000096;sulfur amino acid metabolic process;0.0135982888896129!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0136127787983575!GO:0015002;heme-copper terminal oxidase activity;0.0136127787983575!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0136127787983575!GO:0004129;cytochrome-c oxidase activity;0.0136127787983575!GO:0050681;androgen receptor binding;0.0138397258856548!GO:0005832;chaperonin-containing T-complex;0.0138730981710513!GO:0001944;vasculature development;0.0141564836998262!GO:0006643;membrane lipid metabolic process;0.0148386620884719!GO:0003682;chromatin binding;0.0148386620884719!GO:0000339;RNA cap binding;0.0148751555056532!GO:0003756;protein disulfide isomerase activity;0.0148843699797504!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0148843699797504!GO:0006818;hydrogen transport;0.0149065249694538!GO:0003746;translation elongation factor activity;0.0152300060948911!GO:0031902;late endosome membrane;0.0152410700346949!GO:0001952;regulation of cell-matrix adhesion;0.0154335849884667!GO:0043022;ribosome binding;0.0159107413396894!GO:0007052;mitotic spindle organization and biogenesis;0.0159362423413235!GO:0050662;coenzyme binding;0.016103114907019!GO:0050790;regulation of catalytic activity;0.0161755851045984!GO:0051540;metal cluster binding;0.0162260417911369!GO:0051536;iron-sulfur cluster binding;0.0162260417911369!GO:0008094;DNA-dependent ATPase activity;0.0162296834849372!GO:0005100;Rho GTPase activator activity;0.0163129986027974!GO:0012506;vesicle membrane;0.01679109363669!GO:0001872;zymosan binding;0.0170309966849759!GO:0001878;response to yeast;0.0170309966849759!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0170929636046419!GO:0000775;chromosome, pericentric region;0.0178901072168266!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0179366795647775!GO:0030032;lamellipodium biogenesis;0.0182944969982004!GO:0040012;regulation of locomotion;0.0183412661191675!GO:0015036;disulfide oxidoreductase activity;0.0185120783686858!GO:0048144;fibroblast proliferation;0.0185444045809818!GO:0048145;regulation of fibroblast proliferation;0.0185444045809818!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0186319280991059!GO:0033043;regulation of organelle organization and biogenesis;0.0186319280991059!GO:0016301;kinase activity;0.0186373530619876!GO:0007265;Ras protein signal transduction;0.0188251197256983!GO:0030660;Golgi-associated vesicle membrane;0.019216512356616!GO:0030145;manganese ion binding;0.0192265932317913!GO:0007093;mitotic cell cycle checkpoint;0.0192543219637551!GO:0007034;vacuolar transport;0.0192543219637551!GO:0006401;RNA catabolic process;0.0196014835270978!GO:0043433;negative regulation of transcription factor activity;0.0198985104223825!GO:0048146;positive regulation of fibroblast proliferation;0.0198985104223825!GO:0006289;nucleotide-excision repair;0.0201100801257926!GO:0043065;positive regulation of apoptosis;0.0205421508325009!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0208576360031663!GO:0032984;macromolecular complex disassembly;0.0210417990686218!GO:0043068;positive regulation of programmed cell death;0.0211079742175578!GO:0005774;vacuolar membrane;0.0211238109048146!GO:0016408;C-acyltransferase activity;0.0211602985189154!GO:0050811;GABA receptor binding;0.0218225684764228!GO:0043492;ATPase activity, coupled to movement of substances;0.022089354380403!GO:0007033;vacuole organization and biogenesis;0.022178062664756!GO:0031272;regulation of pseudopodium formation;0.022178062664756!GO:0031269;pseudopodium formation;0.022178062664756!GO:0031344;regulation of cell projection organization and biogenesis;0.022178062664756!GO:0031268;pseudopodium organization and biogenesis;0.022178062664756!GO:0031346;positive regulation of cell projection organization and biogenesis;0.022178062664756!GO:0031274;positive regulation of pseudopodium formation;0.022178062664756!GO:0046519;sphingoid metabolic process;0.0222622625431103!GO:0006739;NADP metabolic process;0.0223212627317432!GO:0030119;AP-type membrane coat adaptor complex;0.0224916268576421!GO:0032940;secretion by cell;0.022520237254046!GO:0016251;general RNA polymerase II transcription factor activity;0.0226908852111497!GO:0000209;protein polyubiquitination;0.0228961114280866!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0230972982142957!GO:0042158;lipoprotein biosynthetic process;0.0233046479954315!GO:0033559;unsaturated fatty acid metabolic process;0.0236862676954082!GO:0006636;unsaturated fatty acid biosynthetic process;0.0236862676954082!GO:0007242;intracellular signaling cascade;0.0236862676954082!GO:0006520;amino acid metabolic process;0.0237110024365147!GO:0045792;negative regulation of cell size;0.0237110024365147!GO:0031529;ruffle organization and biogenesis;0.0240385184043971!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0240416424857741!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0240416424857741!GO:0008147;structural constituent of bone;0.0244475187377421!GO:0006497;protein amino acid lipidation;0.0244619466961958!GO:0006611;protein export from nucleus;0.0245152742463491!GO:0030308;negative regulation of cell growth;0.0245471378609546!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0247103949687854!GO:0006672;ceramide metabolic process;0.0248842849040203!GO:0016584;nucleosome positioning;0.0251100281771683!GO:0046426;negative regulation of JAK-STAT cascade;0.0252887580261091!GO:0007088;regulation of mitosis;0.0255941603446567!GO:0022890;inorganic cation transmembrane transporter activity;0.0261024848295467!GO:0006779;porphyrin biosynthetic process;0.0261024848295467!GO:0033014;tetrapyrrole biosynthetic process;0.0261024848295467!GO:0030031;cell projection biogenesis;0.0263778055179384!GO:0009112;nucleobase metabolic process;0.0266996527745651!GO:0042168;heme metabolic process;0.0283130776928962!GO:0022415;viral reproductive process;0.0283290018317258!GO:0007346;regulation of progression through mitotic cell cycle;0.0284135848395404!GO:0006506;GPI anchor biosynthetic process;0.0284312464184918!GO:0030433;ER-associated protein catabolic process;0.0285497878847917!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0285497878847917!GO:0008652;amino acid biosynthetic process;0.0285497878847917!GO:0006310;DNA recombination;0.0288717669004497!GO:0009966;regulation of signal transduction;0.0289110503490071!GO:0031301;integral to organelle membrane;0.0292598107592543!GO:0007162;negative regulation of cell adhesion;0.0292685908318988!GO:0048660;regulation of smooth muscle cell proliferation;0.0293598754220189!GO:0001666;response to hypoxia;0.0293696345480187!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0298771835418397!GO:0051098;regulation of binding;0.0299981540569256!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0305429756384894!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0308232220026842!GO:0031323;regulation of cellular metabolic process;0.0308962398249575!GO:0006144;purine base metabolic process;0.0312709972915572!GO:0051235;maintenance of localization;0.0316937980665931!GO:0000910;cytokinesis;0.0320418820420532!GO:0005586;collagen type III;0.0326796033623326!GO:0043241;protein complex disassembly;0.0327180694953205!GO:0035035;histone acetyltransferase binding;0.0330091399700864!GO:0006007;glucose catabolic process;0.0330251141070884!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0330780141505442!GO:0045185;maintenance of protein localization;0.0334201202474739!GO:0008234;cysteine-type peptidase activity;0.03378726423166!GO:0009116;nucleoside metabolic process;0.0337952819631862!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0339884499279634!GO:0006505;GPI anchor metabolic process;0.0343026346656426!GO:0016860;intramolecular oxidoreductase activity;0.0343026346656426!GO:0004860;protein kinase inhibitor activity;0.0343776537277843!GO:0030503;regulation of cell redox homeostasis;0.0348245664733551!GO:0006118;electron transport;0.0348245664733551!GO:0008097;5S rRNA binding;0.0348735193515635!GO:0032981;mitochondrial respiratory chain complex I assembly;0.034926200577345!GO:0010257;NADH dehydrogenase complex assembly;0.034926200577345!GO:0033108;mitochondrial respiratory chain complex assembly;0.034926200577345!GO:0007021;tubulin folding;0.0349632498402704!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0349710138171404!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0349710138171404!GO:0006376;mRNA splice site selection;0.0353933842476882!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0353933842476882!GO:0030131;clathrin adaptor complex;0.0358064058438261!GO:0031124;mRNA 3'-end processing;0.0376786740312479!GO:0006607;NLS-bearing substrate import into nucleus;0.0377132170061548!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0382020968593099!GO:0051059;NF-kappaB binding;0.0383627669011643!GO:0031418;L-ascorbic acid binding;0.0386121231918089!GO:0005784;translocon complex;0.0388619536432647!GO:0000287;magnesium ion binding;0.0389385616290432!GO:0030496;midbody;0.0389385616290432!GO:0005099;Ras GTPase activator activity;0.0390986457313334!GO:0030911;TPR domain binding;0.0392150794819271!GO:0006807;nitrogen compound metabolic process;0.0392961522213792!GO:0005801;cis-Golgi network;0.0396870471820612!GO:0030508;thiol-disulfide exchange intermediate activity;0.0398298994755693!GO:0006644;phospholipid metabolic process;0.0398436957659166!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0398436957659166!GO:0008022;protein C-terminus binding;0.0407151935878896!GO:0005669;transcription factor TFIID complex;0.04164285167073!GO:0032507;maintenance of cellular protein localization;0.0423056286444993!GO:0050178;phenylpyruvate tautomerase activity;0.0426693195162769!GO:0006733;oxidoreduction coenzyme metabolic process;0.0433149479500456!GO:0008017;microtubule binding;0.0433149479500456!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0433149479500456!GO:0047485;protein N-terminus binding;0.0439020957116115!GO:0006984;ER-nuclear signaling pathway;0.0439608040445803!GO:0007030;Golgi organization and biogenesis;0.0441990245971262!GO:0005083;small GTPase regulator activity;0.0442609147942758!GO:0005092;GDP-dissociation inhibitor activity;0.044463007034944!GO:0044437;vacuolar part;0.0449392195942777!GO:0006405;RNA export from nucleus;0.0449392195942777!GO:0022406;membrane docking;0.0450261867311354!GO:0048278;vesicle docking;0.0450261867311354!GO:0004003;ATP-dependent DNA helicase activity;0.0452239431337501!GO:0043130;ubiquitin binding;0.0455791286000791!GO:0032182;small conjugating protein binding;0.0455791286000791!GO:0007017;microtubule-based process;0.045961323581832!GO:0016407;acetyltransferase activity;0.0461510569110005!GO:0032906;transforming growth factor-beta2 production;0.0461510569110005!GO:0032909;regulation of transforming growth factor-beta2 production;0.0461510569110005!GO:0030522;intracellular receptor-mediated signaling pathway;0.0464466678454777!GO:0008538;proteasome activator activity;0.0464466678454777!GO:0031543;peptidyl-proline dioxygenase activity;0.0467812013433162!GO:0006066;alcohol metabolic process;0.0467869776820021!GO:0005657;replication fork;0.0468838659335766!GO:0031371;ubiquitin conjugating enzyme complex;0.0468838659335766!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0470817548032922!GO:0008637;apoptotic mitochondrial changes;0.0473614384210372!GO:0000097;sulfur amino acid biosynthetic process;0.0498187501118829!GO:0044255;cellular lipid metabolic process;0.0499627721826342
|sample_id=11456
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=heart
|top_motifs=RXR{A,B,G}:1.30617411603;NKX2-2,8:0.933520725477;TLX1..3_NFIC{dimer}:0.925942733281;EN1,2:0.900967696267;ALX1:0.900503240457;XCPE1{core}:0.897688604735;IKZF1:0.888176772279;NR3C1:0.850086001353;TFAP4:0.824997937771;UFEwm:0.817680481627;NKX3-1:0.811509920285;CDC5L:0.809179361303;ALX4:0.799397888443;RXRA_VDR{dimer}:0.747559917536;AR:0.730882216388;XBP1:0.708348201019;EBF1:0.697891927047;NANOG{mouse}:0.683980957516;EVI1:0.680632728216;HIF1A:0.645238091965;NFATC1..3:0.636186952924;POU3F1..4:0.631365625924;SOX17:0.607570316073;ONECUT1,2:0.553655826197;GLI1..3:0.533946103658;TEAD1:0.52563971083;PAX5:0.496094600873;GFI1B:0.494622762611;FOXD3:0.476585947298;ELF1,2,4:0.46678264471;HOX{A5,B5}:0.440537448615;AIRE:0.433192697262;GTF2A1,2:0.423056642002;TP53:0.418419832215;MAFB:0.413944253972;PATZ1:0.412797616105;MYBL2:0.404021394007;MTE{core}:0.400137392943;ZNF238:0.386287432515;RBPJ:0.370126681144;TFDP1:0.365084900391;TBX4,5:0.358657223067;POU1F1:0.356433008616;TAL1_TCF{3,4,12}:0.348530495541;MAZ:0.345198145642;HMGA1,2:0.341543967536;SP1:0.337405289203;TFAP2{A,C}:0.331229906682;HES1:0.326031485289;GTF2I:0.324324347495;BPTF:0.32117352274;GFI1:0.31945429067;NFE2L1:0.316008447993;TOPORS:0.313293883707;SOX2:0.308637781524;HBP1_HMGB_SSRP1_UBTF:0.298795102242;SOX{8,9,10}:0.295580307472;ELK1,4_GABP{A,B1}:0.288509838267;TFAP2B:0.288233446998;ZNF143:0.278346526203;bHLH_family:0.274433739324;PAX1,9:0.274167938197;EGR1..3:0.2631214854;CRX:0.25988819218;CEBPA,B_DDIT3:0.243557203128;HSF1,2:0.223396106023;FOX{I1,J2}:0.222671651869;ZFP161:0.205041317086;LHX3,4:0.190374540772;PAX8:0.189999731609;HIC1:0.185413690018;ZIC1..3:0.184713122879;PRDM1:0.183637195165;TEF:0.165386632371;MZF1:0.147442772418;NFE2L2:0.13936858711;STAT2,4,6:0.136531624522;SPZ1:0.131737876946;SRF:0.125046375112;ZNF148:0.11948797892;CDX1,2,4:0.11408160418;GATA4:0.110325067649;ARID5B:0.109356426302;HLF:0.107509801718;PPARG:0.105464959624;NRF1:0.105277450646;ADNP_IRX_SIX_ZHX:0.0908255911698;NHLH1,2:0.0868608858238;LEF1_TCF7_TCF7L1,2:0.0861752658476;AHR_ARNT_ARNT2:0.085669283395;ZBTB6:0.0847058281538;SMAD1..7,9:0.0841839885364;REST:0.0765721698954;NFIX:0.0764742512502;GZF1:0.0736245065593;TLX2:0.0659009473929;NKX2-1,4:0.058725212923;MYB:0.0567156522481;ZBTB16:0.0416040445105;NR5A1,2:0.0356567294184;TFCP2:0.0275837061998;FOXP1:0.0198076659513;YY1:0.0136546683055;STAT1,3:0.0115406506399;GATA6:0.00344255063012;BACH2:-0.0139229699991;TBP:-0.0250546705921;STAT5{A,B}:-0.0256918654008;ETS1,2:-0.0361901736986;ZNF384:-0.0563053197159;ESR1:-0.0611273933317;KLF4:-0.0905564157522;NFKB1_REL_RELA:-0.0907670747717;HNF4A_NR2F1,2:-0.0921112050737;E2F1..5:-0.103196559337;ZNF423:-0.107755849279;ATF4:-0.112439542764;NFY{A,B,C}:-0.114195535863;FOS_FOS{B,L1}_JUN{B,D}:-0.11979160693;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.120166233932;NFE2:-0.121010577595;MED-1{core}:-0.121789390595;HNF1A:-0.123020292606;PAX3,7:-0.142493054659;PAX4:-0.144518138074;SPI1:-0.146428306558;PBX1:-0.147877183861;PAX6:-0.15980435886;FOXP3:-0.169373424008;SREBF1,2:-0.171320885532;FOSL2:-0.171386409426;FOXL1:-0.181103216756;NR6A1:-0.204662880003;SOX5:-0.220137345471;IKZF2:-0.221416457739;CUX2:-0.221471401521;PITX1..3:-0.234211888108;SPIB:-0.237401377613;MTF1:-0.241333956414;IRF7:-0.25051053771;ESRRA:-0.260237079365;PDX1:-0.264698486606;FOX{D1,D2}:-0.266589221937;HMX1:-0.272580230643;TGIF1:-0.277600722754;PAX2:-0.285630960238;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.295060529961;BREu{core}:-0.324179391662;ATF6:-0.325440706837;PRRX1,2:-0.335029593171;HOXA9_MEIS1:-0.348029785111;DBP:-0.349819458016;MEF2{A,B,C,D}:-0.353289705406;MYFfamily:-0.380934853782;RFX1:-0.397326782347;HOX{A4,D4}:-0.399051960321;FOX{F1,F2,J1}:-0.399134022245;NKX6-1,2:-0.402935364438;POU2F1..3:-0.404039087532;FOXN1:-0.409693629044;FOXO1,3,4:-0.416642252115;NKX3-2:-0.422699500541;ATF2:-0.42764894176;LMO2:-0.435383526801;FOXA2:-0.462869078665;POU6F1:-0.466874964756;DMAP1_NCOR{1,2}_SMARC:-0.479185013048;JUN:-0.487137625997;GCM1,2:-0.494613266076;ATF5_CREB3:-0.496229292445;RUNX1..3:-0.50262843996;HAND1,2:-0.508577338369;IRF1,2:-0.512920409889;CREB1:-0.514149162213;NR1H4:-0.519019457491;POU5F1:-0.545747149282;T:-0.558767174127;OCT4_SOX2{dimer}:-0.562785060267;NFIL3:-0.580454294619;MYOD1:-0.601512548979;RORA:-0.62455874376;FOXM1:-0.642444059544;RREB1:-0.652361129993;FOXQ1:-0.67330722704;EP300:-0.674727922325;RFX2..5_RFXANK_RFXAP:-0.799718940461;NANOG:-0.85926672363;NKX2-3_NKX2-5:-0.875479699727;SNAI1..3:-0.882439674838;ZEB1:-0.902032586901;VSX1,2:-0.965606892076;HOX{A6,A7,B6,B7}:-1.68051941317
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11456-119A7;search_select_hide=table117:FF:11456-119A7
}}
}}

Latest revision as of 18:02, 4 June 2020

Name:Fibroblast - Cardiac, donor5
Species:Human (Homo sapiens)
Library ID:CNhs12057
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stagefetus
sexunknown
agefetal
cell typefibroblast
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2832
catalog numberSC6305
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005027
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12057 CAGE DRX008247 DRR009119
Accession ID Hg19

Library idBAMCTSS
CNhs12057 DRZ000544 DRZ001929
Accession ID Hg38

Library idBAMCTSS
CNhs12057 DRZ011894 DRZ013279
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0929
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0923
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.353
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.201
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0616
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.283
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.288
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.152
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.148
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.1
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0118
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.104
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0549
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.517
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.383
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.187
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.857
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.416
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.736
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12057

Jaspar motifP-value
MA0002.20.00266
MA0003.10.773
MA0004.10.348
MA0006.10.154
MA0007.10.397
MA0009.10.704
MA0014.10.887
MA0017.10.0666
MA0018.20.0288
MA0019.10.865
MA0024.10.885
MA0025.10.0496
MA0027.10.55
MA0028.10.00473
MA0029.10.0576
MA0030.10.547
MA0031.10.99
MA0035.20.85
MA0038.10.763
MA0039.20.851
MA0040.10.523
MA0041.10.33
MA0042.10.744
MA0043.10.0262
MA0046.10.0141
MA0047.20.111
MA0048.10.0826
MA0050.10.00895
MA0051.10.189
MA0052.10.0119
MA0055.10.0197
MA0057.10.463
MA0058.10.135
MA0059.10.166
MA0060.10.609
MA0061.10.0364
MA0062.20.425
MA0065.26.72034e-4
MA0066.10.565
MA0067.10.139
MA0068.10.0447
MA0069.10.973
MA0070.10.927
MA0071.10.819
MA0072.10.428
MA0073.10.818
MA0074.10.264
MA0076.10.0821
MA0077.10.119
MA0078.10.234
MA0079.20.304
MA0080.25.97106e-6
MA0081.10.427
MA0083.10.787
MA0084.10.00386
MA0087.10.151
MA0088.10.776
MA0090.10.137
MA0091.10.835
MA0092.10.476
MA0093.10.328
MA0099.20.0554
MA0100.10.713
MA0101.10.885
MA0102.20.953
MA0103.12.2864e-4
MA0104.20.0432
MA0105.10.00255
MA0106.10.86
MA0107.10.615
MA0108.20.439
MA0111.10.361
MA0112.20.0304
MA0113.10.126
MA0114.10.00524
MA0115.10.144
MA0116.10.00701
MA0117.10.184
MA0119.10.88
MA0122.10.78
MA0124.10.54
MA0125.10.484
MA0131.10.359
MA0135.10.0457
MA0136.16.26749e-5
MA0137.20.481
MA0138.20.304
MA0139.10.147
MA0140.10.676
MA0141.10.498
MA0142.10.0483
MA0143.10.292
MA0144.10.618
MA0145.10.568
MA0146.10.683
MA0147.10.0767
MA0148.10.297
MA0149.10.257
MA0150.10.0822
MA0152.10.0967
MA0153.10.207
MA0154.10.0445
MA0155.10.854
MA0156.10.447
MA0157.10.375
MA0159.10.323
MA0160.10.044
MA0162.10.278
MA0163.10.0592
MA0164.10.553
MA0258.10.0684
MA0259.10.201



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12057

Novel motifP-value
10.179
100.378
1000.976
1010.118
1020.457
1030.345
1040.792
1050.27
1060.354
1070.877
1080.755
1090.65
110.55
1100.499
1110.038
1120.319
1130.0574
1140.121
1150.481
1160.442
1170.984
1180.533
1190.358
120.223
1200.116
1210.82
1220.0274
1230.00447
1240.00525
1250.601
1260.659
1270.071
1280.7
1290.204
130.446
1300.545
1310.93
1320.201
1330.391
1340.475
1350.605
1360.151
1370.17
1380.806
1390.382
140.199
1400.704
1410.528
1420.0592
1430.543
1440.861
1450.464
1460.901
1470.52
1480.226
1490.157
150.0667
1500.35
1510.652
1520.0735
1530.738
1540.835
1550.00265
1560.446
1570.306
1580.0082
1590.2
160.895
1600.369
1610.422
1620.997
1630.391
1640.298
1650.0673
1660.498
1670.266
1680.647
1690.87
170.512
180.632
190.774
20.884
200.627
210.617
220.682
230.676
240.466
250.0659
260.926
270.766
280.278
290.751
30.728
300.977
310.94
323.34248e-4
330.801
340.71
350.0828
360.145
370.999
380.333
390.514
40.0158
400.0648
410.339
420.396
430.137
440.832
450.395
460.253
470.443
480.999
490.0666
50.255
500.557
510.354
520.451
530.172
540.602
550.673
560.426
570.659
580.0403
590.533
60.62
600.172
610.564
620.0761
630.607
640.417
650.674
660.924
670.951
680.834
690.725
70.129
700.0478
710.231
720.491
730.0352
740.756
750.409
760.924
770.682
780.532
790.147
80.883
800.19
810.103
820.0287
830.391
840.731
850.474
860.972
870.0119
880.956
890.436
90.729
900.331
910.419
920.517
930.208
940.0596
950.134
960.12
970.513
980.0153
990.0643



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12057


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000057 (fibroblast)
0002548 (cardiac fibroblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000059 (human cardiac fibroblast sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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