FF:11761-123H6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00006010 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008565;DRR009437;DRZ000862;DRZ002247;DRZ012212;DRZ013597 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002118,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000275 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor3%2520%2528SOC-57-02%2529.CNhs12377.11761-123H6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor3%2520%2528SOC-57-02%2529.CNhs12377.11761-123H6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor3%2520%2528SOC-57-02%2529.CNhs12377.11761-123H6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor3%2520%2528SOC-57-02%2529.CNhs12377.11761-123H6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor3%2520%2528SOC-57-02%2529.CNhs12377.11761-123H6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11761-123H6 | |id=FF:11761-123H6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000275 | ||
|is_obsolete= | |||
|library_id=CNhs12377 | |||
|library_id_phase_based=2:CNhs12377 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11761 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11761 | |||
|name=mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02) | |name=mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02) | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12377,LSID914,release011,COMPLETED | |profile_hcage=CNhs12377,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=42.44185 | |rna_weight_ug=42.44185 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.93144493675342e-210!GO:0005737;cytoplasm;4.82199969786176e-202!GO:0043226;organelle;3.8518608136677e-157!GO:0043229;intracellular organelle;9.72066843788505e-157!GO:0043231;intracellular membrane-bound organelle;5.23806113384887e-156!GO:0043227;membrane-bound organelle;1.02443221016822e-155!GO:0044444;cytoplasmic part;9.73900018223415e-148!GO:0044422;organelle part;3.30599869513252e-120!GO:0044446;intracellular organelle part;9.95252504378142e-119!GO:0005515;protein binding;1.89752084878122e-83!GO:0032991;macromolecular complex;7.11145588257423e-78!GO:0044238;primary metabolic process;8.99971817765808e-74!GO:0030529;ribonucleoprotein complex;4.49966433617006e-72!GO:0044237;cellular metabolic process;7.55691890838533e-72!GO:0043170;macromolecule metabolic process;8.20162254137719e-65!GO:0005739;mitochondrion;4.92864403716339e-58!GO:0043233;organelle lumen;9.46019336044057e-58!GO:0031974;membrane-enclosed lumen;9.46019336044057e-58!GO:0031090;organelle membrane;1.07617694855333e-56!GO:0003723;RNA binding;6.40869230834922e-54!GO:0019538;protein metabolic process;2.79920411680234e-53!GO:0044428;nuclear part;5.04619109689396e-53!GO:0044260;cellular macromolecule metabolic process;5.21515458249771e-47!GO:0044267;cellular protein metabolic process;2.03267740990728e-46!GO:0015031;protein transport;2.48597612424727e-46!GO:0005840;ribosome;5.00170079890173e-46!GO:0033036;macromolecule localization;7.17882621127995e-46!GO:0005634;nucleus;9.13563883474005e-45!GO:0006412;translation;3.16426593502685e-44!GO:0016043;cellular component organization and biogenesis;4.27000272704913e-44!GO:0045184;establishment of protein localization;6.38272090351736e-44!GO:0009058;biosynthetic process;8.33777083036424e-44!GO:0008104;protein localization;1.61227107258062e-43!GO:0005829;cytosol;1.3290940168062e-41!GO:0003735;structural constituent of ribosome;1.57780283550518e-40!GO:0044429;mitochondrial part;1.68411435203662e-39!GO:0043234;protein complex;2.79011454282344e-38!GO:0044249;cellular biosynthetic process;4.57004000917224e-37!GO:0009059;macromolecule biosynthetic process;4.83980863619161e-37!GO:0031967;organelle envelope;6.61591155951459e-37!GO:0031975;envelope;1.68751415828789e-36!GO:0033279;ribosomal subunit;2.02637898160967e-35!GO:0006396;RNA processing;6.77737933307232e-35!GO:0046907;intracellular transport;1.40209976424628e-34!GO:0031981;nuclear lumen;7.23423072521701e-32!GO:0043283;biopolymer metabolic process;9.04341429278263e-31!GO:0006886;intracellular protein transport;1.55954178166256e-29!GO:0016071;mRNA metabolic process;1.61401535574409e-29!GO:0008380;RNA splicing;8.0548349492717e-29!GO:0005783;endoplasmic reticulum;1.11914421457102e-28!GO:0005740;mitochondrial envelope;5.88083370424012e-27!GO:0012505;endomembrane system;1.63975350746991e-26!GO:0010467;gene expression;2.21863381921571e-26!GO:0065003;macromolecular complex assembly;3.0905985863786e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.10748628117243e-26!GO:0006397;mRNA processing;9.20129045854124e-26!GO:0031966;mitochondrial membrane;2.37109587308013e-25!GO:0019866;organelle inner membrane;3.0140757479028e-24!GO:0022607;cellular component assembly;2.87177629386729e-23!GO:0051649;establishment of cellular localization;5.23392618018536e-23!GO:0051641;cellular localization;6.21797318252877e-23!GO:0005743;mitochondrial inner membrane;8.61370063503156e-23!GO:0006996;organelle organization and biogenesis;1.12344932129766e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.05513375465376e-22!GO:0006119;oxidative phosphorylation;2.53130269109364e-22!GO:0044445;cytosolic part;3.93148486348758e-22!GO:0006457;protein folding;3.20532881407036e-21!GO:0005794;Golgi apparatus;7.5699693592619e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.26378243265498e-21!GO:0043228;non-membrane-bound organelle;9.16363945978737e-21!GO:0043232;intracellular non-membrane-bound organelle;9.16363945978737e-21!GO:0048770;pigment granule;2.61673687104397e-20!GO:0042470;melanosome;2.61673687104397e-20!GO:0044432;endoplasmic reticulum part;7.99377159993175e-20!GO:0005681;spliceosome;1.42642211537656e-19!GO:0044455;mitochondrial membrane part;2.30830458884144e-19!GO:0005654;nucleoplasm;4.11594969816881e-19!GO:0016462;pyrophosphatase activity;1.0313524775675e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.25124412622601e-18!GO:0015934;large ribosomal subunit;1.47114324072103e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.0667022650067e-18!GO:0000166;nucleotide binding;6.49568613679543e-18!GO:0015935;small ribosomal subunit;7.79220588714934e-18!GO:0017111;nucleoside-triphosphatase activity;1.4685328595767e-17!GO:0008134;transcription factor binding;4.21919894586452e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;5.98543598398809e-17!GO:0019941;modification-dependent protein catabolic process;1.19352668020281e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.19352668020281e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.21559211219383e-16!GO:0043285;biopolymer catabolic process;1.36518115817837e-16!GO:0044257;cellular protein catabolic process;1.45231038574566e-16!GO:0030163;protein catabolic process;1.68940391329776e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.71718178662902e-16!GO:0016192;vesicle-mediated transport;4.32237094893572e-16!GO:0005746;mitochondrial respiratory chain;4.42124167106469e-16!GO:0016874;ligase activity;4.62261840745161e-16!GO:0044265;cellular macromolecule catabolic process;4.89349835341762e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.93727244302137e-16!GO:0051186;cofactor metabolic process;7.26810375088435e-16!GO:0022618;protein-RNA complex assembly;1.05656822195519e-15!GO:0048193;Golgi vesicle transport;1.07361798166842e-15!GO:0009057;macromolecule catabolic process;1.51393128242258e-15!GO:0006512;ubiquitin cycle;1.71407990243215e-15!GO:0044451;nucleoplasm part;1.76613634621419e-15!GO:0031980;mitochondrial lumen;1.89022107295675e-15!GO:0005759;mitochondrial matrix;1.89022107295675e-15!GO:0012501;programmed cell death;6.77393042939049e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.77393042939049e-15!GO:0003954;NADH dehydrogenase activity;6.77393042939049e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.77393042939049e-15!GO:0006915;apoptosis;1.8936073969919e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.95680399811249e-14!GO:0051082;unfolded protein binding;2.8413110213554e-14!GO:0043412;biopolymer modification;2.90409903104728e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.16127450527614e-14!GO:0006605;protein targeting;6.0228165380544e-14!GO:0005789;endoplasmic reticulum membrane;6.57464832241987e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.27676601108495e-13!GO:0044248;cellular catabolic process;1.2785836582796e-13!GO:0006464;protein modification process;2.26840502265098e-13!GO:0032553;ribonucleotide binding;2.71233884421235e-13!GO:0032555;purine ribonucleotide binding;2.71233884421235e-13!GO:0007049;cell cycle;3.15768946110145e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.02494500943577e-13!GO:0008219;cell death;4.21518670967305e-13!GO:0016265;death;4.21518670967305e-13!GO:0017076;purine nucleotide binding;4.62633442918251e-13!GO:0005730;nucleolus;5.17161781980386e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.32482447090696e-13!GO:0045271;respiratory chain complex I;5.32482447090696e-13!GO:0005747;mitochondrial respiratory chain complex I;5.32482447090696e-13!GO:0008135;translation factor activity, nucleic acid binding;5.37081308341461e-13!GO:0042775;organelle ATP synthesis coupled electron transport;5.39368073567549e-13!GO:0042773;ATP synthesis coupled electron transport;5.39368073567549e-13!GO:0006259;DNA metabolic process;9.14882483840709e-13!GO:0005793;ER-Golgi intermediate compartment;1.2738174330968e-12!GO:0005761;mitochondrial ribosome;1.46301550867957e-12!GO:0000313;organellar ribosome;1.46301550867957e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.55542773980333e-12!GO:0048523;negative regulation of cellular process;1.70819400640438e-12!GO:0009055;electron carrier activity;1.98473020612783e-12!GO:0006732;coenzyme metabolic process;2.01949542338213e-12!GO:0003924;GTPase activity;6.57823388367203e-12!GO:0003712;transcription cofactor activity;2.22322533292914e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;7.75130623192076e-11!GO:0000375;RNA splicing, via transesterification reactions;7.75130623192076e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.75130623192076e-11!GO:0048519;negative regulation of biological process;9.00390554809287e-11!GO:0005635;nuclear envelope;9.25742969071249e-11!GO:0043687;post-translational protein modification;1.52651187344331e-10!GO:0005768;endosome;2.38848344877748e-10!GO:0043067;regulation of programmed cell death;2.42235917486563e-10!GO:0006413;translational initiation;2.92300677638987e-10!GO:0042981;regulation of apoptosis;3.4020428935187e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.59898917990989e-10!GO:0003743;translation initiation factor activity;4.78564479277092e-10!GO:0006163;purine nucleotide metabolic process;4.7901538668125e-10!GO:0009259;ribonucleotide metabolic process;5.1881545937192e-10!GO:0009150;purine ribonucleotide metabolic process;6.96346182750476e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.2785115228713e-10!GO:0044431;Golgi apparatus part;1.00162799183998e-09!GO:0043069;negative regulation of programmed cell death;1.22218846706031e-09!GO:0006446;regulation of translational initiation;1.23865753332441e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.28691130084872e-09!GO:0003676;nucleic acid binding;1.95052726520406e-09!GO:0031965;nuclear membrane;2.33072711977475e-09!GO:0022402;cell cycle process;2.56109898928677e-09!GO:0016023;cytoplasmic membrane-bound vesicle;2.63122796502394e-09!GO:0031988;membrane-bound vesicle;2.6361887798763e-09!GO:0006164;purine nucleotide biosynthetic process;2.84565665194931e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.78623057403455e-09!GO:0008639;small protein conjugating enzyme activity;3.93871053443974e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.96874859400747e-09!GO:0043066;negative regulation of apoptosis;3.98009358700758e-09!GO:0006461;protein complex assembly;4.26064196041681e-09!GO:0008565;protein transporter activity;4.4385479702553e-09!GO:0006888;ER to Golgi vesicle-mediated transport;4.4452440373863e-09!GO:0005525;GTP binding;4.48445166862068e-09!GO:0009056;catabolic process;5.68039042465468e-09!GO:0016070;RNA metabolic process;6.41417692226161e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.47151599383105e-09!GO:0019787;small conjugating protein ligase activity;6.60143121655035e-09!GO:0004842;ubiquitin-protein ligase activity;6.98228894454461e-09!GO:0009141;nucleoside triphosphate metabolic process;7.77145745348537e-09!GO:0030120;vesicle coat;7.81194433558003e-09!GO:0030662;coated vesicle membrane;7.81194433558003e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.86114785410656e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.96060078510986e-09!GO:0009144;purine nucleoside triphosphate metabolic process;7.96060078510986e-09!GO:0016604;nuclear body;8.03250870445912e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.49399513327583e-09!GO:0009060;aerobic respiration;8.85822072620894e-09!GO:0006916;anti-apoptosis;1.05506608629573e-08!GO:0009260;ribonucleotide biosynthetic process;1.06835093408071e-08!GO:0015986;ATP synthesis coupled proton transport;1.15171722368794e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.15171722368794e-08!GO:0006913;nucleocytoplasmic transport;1.24273814438517e-08!GO:0000074;regulation of progression through cell cycle;1.60038873689503e-08!GO:0048475;coated membrane;1.82003423482938e-08!GO:0030117;membrane coat;1.82003423482938e-08!GO:0051726;regulation of cell cycle;1.86293832027447e-08!GO:0016881;acid-amino acid ligase activity;1.91288725104273e-08!GO:0031982;vesicle;2.11562825312985e-08!GO:0051169;nuclear transport;2.3453206511914e-08!GO:0005524;ATP binding;2.50164674541878e-08!GO:0045333;cellular respiration;2.54066422134975e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.76782245438938e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.76782245438938e-08!GO:0031410;cytoplasmic vesicle;2.86354078349168e-08!GO:0051188;cofactor biosynthetic process;3.29127196764265e-08!GO:0006366;transcription from RNA polymerase II promoter;3.38482268659211e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.43240334129985e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.43240334129985e-08!GO:0051246;regulation of protein metabolic process;3.44974454816086e-08!GO:0005788;endoplasmic reticulum lumen;3.60112906052352e-08!GO:0032559;adenyl ribonucleotide binding;4.3801196895232e-08!GO:0032561;guanyl ribonucleotide binding;4.3801196895232e-08!GO:0019001;guanyl nucleotide binding;4.3801196895232e-08!GO:0044453;nuclear membrane part;5.0866282183695e-08!GO:0042254;ribosome biogenesis and assembly;5.67111375477803e-08!GO:0046034;ATP metabolic process;6.06059953127822e-08!GO:0019829;cation-transporting ATPase activity;7.01557487733737e-08!GO:0000139;Golgi membrane;7.20445471740471e-08!GO:0030554;adenyl nucleotide binding;7.73688110109183e-08!GO:0050794;regulation of cellular process;9.25482315276481e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.21341300167366e-07!GO:0006099;tricarboxylic acid cycle;1.3516349822514e-07!GO:0046356;acetyl-CoA catabolic process;1.3516349822514e-07!GO:0003714;transcription corepressor activity;1.4709487353959e-07!GO:0017038;protein import;1.54324420571923e-07!GO:0016491;oxidoreductase activity;1.6440250395691e-07!GO:0007005;mitochondrion organization and biogenesis;1.78297645845031e-07!GO:0006754;ATP biosynthetic process;2.28831169022144e-07!GO:0006753;nucleoside phosphate metabolic process;2.28831169022144e-07!GO:0051187;cofactor catabolic process;2.80388585575282e-07!GO:0006399;tRNA metabolic process;3.49569874043131e-07!GO:0044440;endosomal part;3.58229520701759e-07!GO:0010008;endosome membrane;3.58229520701759e-07!GO:0006974;response to DNA damage stimulus;3.61196826820331e-07!GO:0016607;nuclear speck;4.05163816730194e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.55307900224425e-07!GO:0005770;late endosome;6.15548967786537e-07!GO:0006084;acetyl-CoA metabolic process;6.78746385879319e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.44397430626302e-07!GO:0004812;aminoacyl-tRNA ligase activity;8.44397430626302e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.44397430626302e-07!GO:0009109;coenzyme catabolic process;9.55275720213874e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.05833606306413e-06!GO:0016564;transcription repressor activity;1.09038697789722e-06!GO:0043038;amino acid activation;1.09661945453016e-06!GO:0006418;tRNA aminoacylation for protein translation;1.09661945453016e-06!GO:0043039;tRNA aminoacylation;1.09661945453016e-06!GO:0007243;protein kinase cascade;1.1013520584209e-06!GO:0009117;nucleotide metabolic process;1.56778360687104e-06!GO:0016853;isomerase activity;1.59927962923607e-06!GO:0009108;coenzyme biosynthetic process;1.73688951611987e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.77307467681385e-06!GO:0000278;mitotic cell cycle;1.83673379262722e-06!GO:0006793;phosphorus metabolic process;2.05654302649152e-06!GO:0006796;phosphate metabolic process;2.05654302649152e-06!GO:0031252;leading edge;2.11007008838076e-06!GO:0008654;phospholipid biosynthetic process;2.1555440180898e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.63603173991589e-06!GO:0048522;positive regulation of cellular process;2.83839680189928e-06!GO:0045786;negative regulation of progression through cell cycle;2.84119054705703e-06!GO:0016787;hydrolase activity;2.87952506854553e-06!GO:0016887;ATPase activity;3.01929850576944e-06!GO:0004298;threonine endopeptidase activity;3.90645862522821e-06!GO:0042623;ATPase activity, coupled;3.97979405019135e-06!GO:0045259;proton-transporting ATP synthase complex;4.65583357040212e-06!GO:0005773;vacuole;5.13010886482065e-06!GO:0005798;Golgi-associated vesicle;5.31258424212645e-06!GO:0006752;group transfer coenzyme metabolic process;5.54767444381985e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;5.59170542303716e-06!GO:0016740;transferase activity;5.74411732214292e-06!GO:0006613;cotranslational protein targeting to membrane;5.78405822552786e-06!GO:0008026;ATP-dependent helicase activity;7.14013279168064e-06!GO:0045454;cell redox homeostasis;8.26190899295058e-06!GO:0004386;helicase activity;8.65622656211853e-06!GO:0005643;nuclear pore;9.81289790895556e-06!GO:0016563;transcription activator activity;1.08922663551169e-05!GO:0065002;intracellular protein transport across a membrane;1.12103572386679e-05!GO:0005769;early endosome;1.14043325027427e-05!GO:0032446;protein modification by small protein conjugation;1.21666549734516e-05!GO:0051789;response to protein stimulus;1.2636476372815e-05!GO:0006986;response to unfolded protein;1.2636476372815e-05!GO:0006323;DNA packaging;1.40655209190789e-05!GO:0016310;phosphorylation;1.43313040219707e-05!GO:0051170;nuclear import;1.48012651381905e-05!GO:0016126;sterol biosynthetic process;1.74534812795166e-05!GO:0006281;DNA repair;1.78811562401679e-05!GO:0016567;protein ubiquitination;1.93760109948609e-05!GO:0000245;spliceosome assembly;2.04031897709358e-05!GO:0005905;coated pit;2.05969598421635e-05!GO:0008361;regulation of cell size;2.08331340768831e-05!GO:0006091;generation of precursor metabolites and energy;2.11077764011247e-05!GO:0050789;regulation of biological process;2.40528734838758e-05!GO:0007264;small GTPase mediated signal transduction;2.41257585984702e-05!GO:0006606;protein import into nucleus;2.48841726999275e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.54651393821108e-05!GO:0030867;rough endoplasmic reticulum membrane;2.68959695114224e-05!GO:0051276;chromosome organization and biogenesis;2.70073436043588e-05!GO:0016049;cell growth;3.1888370941197e-05!GO:0031324;negative regulation of cellular metabolic process;3.53525468839759e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.65983895129416e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.83008185979997e-05!GO:0016859;cis-trans isomerase activity;4.10003256313407e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.1532206337217e-05!GO:0030133;transport vesicle;4.92055565294753e-05!GO:0008610;lipid biosynthetic process;5.03556616052668e-05!GO:0006612;protein targeting to membrane;5.07001371541496e-05!GO:0033116;ER-Golgi intermediate compartment membrane;5.20559252396082e-05!GO:0015630;microtubule cytoskeleton;5.40577691474919e-05!GO:0043623;cellular protein complex assembly;6.38009629989171e-05!GO:0000323;lytic vacuole;6.42765274497528e-05!GO:0005764;lysosome;6.42765274497528e-05!GO:0005667;transcription factor complex;6.46582417599779e-05!GO:0043566;structure-specific DNA binding;7.11977028163638e-05!GO:0006364;rRNA processing;7.57350879819646e-05!GO:0030659;cytoplasmic vesicle membrane;7.80080072071953e-05!GO:0005762;mitochondrial large ribosomal subunit;7.87979928705022e-05!GO:0000315;organellar large ribosomal subunit;7.87979928705022e-05!GO:0005791;rough endoplasmic reticulum;7.91341997658148e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.02362078733583e-05!GO:0003713;transcription coactivator activity;8.59956872212708e-05!GO:0009719;response to endogenous stimulus;9.4723323329214e-05!GO:0051427;hormone receptor binding;9.49657900148893e-05!GO:0065004;protein-DNA complex assembly;9.65225737204564e-05!GO:0001558;regulation of cell growth;9.94292966342129e-05!GO:0046930;pore complex;0.000116099458572489!GO:0003697;single-stranded DNA binding;0.000121447803034166!GO:0016072;rRNA metabolic process;0.000123100625371554!GO:0019899;enzyme binding;0.000137397863258609!GO:0000151;ubiquitin ligase complex;0.000148190503091533!GO:0016044;membrane organization and biogenesis;0.000148950580972583!GO:0051301;cell division;0.000153894201230129!GO:0044433;cytoplasmic vesicle part;0.000157638651404488!GO:0044262;cellular carbohydrate metabolic process;0.000164715924454308!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000167754031194555!GO:0006403;RNA localization;0.000175031588654045!GO:0003724;RNA helicase activity;0.000188481935824215!GO:0050657;nucleic acid transport;0.00018939366656213!GO:0051236;establishment of RNA localization;0.00018939366656213!GO:0050658;RNA transport;0.00018939366656213!GO:0009892;negative regulation of metabolic process;0.000193139339804643!GO:0035257;nuclear hormone receptor binding;0.000193157004069266!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000194928538581568!GO:0048468;cell development;0.000195254821865441!GO:0016568;chromatin modification;0.00020976274035588!GO:0043021;ribonucleoprotein binding;0.000217885917599592!GO:0006333;chromatin assembly or disassembly;0.000240381145517311!GO:0004576;oligosaccharyl transferase activity;0.000259680034614468!GO:0006695;cholesterol biosynthetic process;0.000261228217285564!GO:0031968;organelle outer membrane;0.000266275583899537!GO:0005885;Arp2/3 protein complex;0.000283764532164519!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000320539097281521!GO:0065009;regulation of a molecular function;0.000326310650032007!GO:0008250;oligosaccharyl transferase complex;0.000326310650032007!GO:0019867;outer membrane;0.00034715368366182!GO:0005694;chromosome;0.00034715368366182!GO:0030029;actin filament-based process;0.00034715368366182!GO:0012506;vesicle membrane;0.000383979427884225!GO:0046467;membrane lipid biosynthetic process;0.00040062194061858!GO:0009967;positive regulation of signal transduction;0.000415812159286036!GO:0016779;nucleotidyltransferase activity;0.000456659104885402!GO:0018196;peptidyl-asparagine modification;0.000457783964506726!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000457783964506726!GO:0005048;signal sequence binding;0.000479040457972268!GO:0048518;positive regulation of biological process;0.000487855409077518!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000502816235492311!GO:0046474;glycerophospholipid biosynthetic process;0.000520766699934914!GO:0000314;organellar small ribosomal subunit;0.000541859858883763!GO:0005763;mitochondrial small ribosomal subunit;0.000541859858883763!GO:0030663;COPI coated vesicle membrane;0.000563223449817641!GO:0030126;COPI vesicle coat;0.000563223449817641!GO:0005813;centrosome;0.000564493340572471!GO:0048471;perinuclear region of cytoplasm;0.000597296538936455!GO:0000785;chromatin;0.000637464447537389!GO:0030658;transport vesicle membrane;0.000760049841773152!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000769262617992569!GO:0051920;peroxiredoxin activity;0.000793968243568364!GO:0044427;chromosomal part;0.000793968243568364!GO:0007050;cell cycle arrest;0.000794638882427965!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000821252072568254!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000831919834977068!GO:0000087;M phase of mitotic cell cycle;0.000853056584708256!GO:0007010;cytoskeleton organization and biogenesis;0.000916688900409034!GO:0030118;clathrin coat;0.000934093158188043!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000943656908153279!GO:0008092;cytoskeletal protein binding;0.00098077667321663!GO:0007067;mitosis;0.00102621197978606!GO:0022403;cell cycle phase;0.00103513478633344!GO:0042802;identical protein binding;0.00108273983952429!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00113038079403396!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00121082400798854!GO:0019843;rRNA binding;0.00121937921077273!GO:0006260;DNA replication;0.0012972752603047!GO:0008047;enzyme activator activity;0.0012972752603047!GO:0006891;intra-Golgi vesicle-mediated transport;0.00131433374143837!GO:0006650;glycerophospholipid metabolic process;0.00134022313451822!GO:0016481;negative regulation of transcription;0.00134453659341465!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00137636984216818!GO:0005741;mitochondrial outer membrane;0.00142133931330059!GO:0016197;endosome transport;0.00144164944428193!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00149719706776257!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00149719706776257!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00149719706776257!GO:0006839;mitochondrial transport;0.00158097971385109!GO:0048500;signal recognition particle;0.00158414928979143!GO:0005815;microtubule organizing center;0.00165795187615426!GO:0045045;secretory pathway;0.00169590951065276!GO:0030137;COPI-coated vesicle;0.00175458644420432!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00181162906786993!GO:0030176;integral to endoplasmic reticulum membrane;0.00188195287608395!GO:0001726;ruffle;0.00202030514952425!GO:0051028;mRNA transport;0.00202030514952425!GO:0035258;steroid hormone receptor binding;0.00206037617731451!GO:0030132;clathrin coat of coated pit;0.00207642839178237!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00234123035890617!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00239959323960629!GO:0008632;apoptotic program;0.0024757914085291!GO:0009165;nucleotide biosynthetic process;0.00249400695275706!GO:0016363;nuclear matrix;0.00268528853257796!GO:0031901;early endosome membrane;0.00279303626233745!GO:0030660;Golgi-associated vesicle membrane;0.00279317182810746!GO:0030134;ER to Golgi transport vesicle;0.00279970327995427!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00283423419170305!GO:0031072;heat shock protein binding;0.00297991232877781!GO:0043681;protein import into mitochondrion;0.00320250704431065!GO:0008243;plasminogen activator activity;0.00329671395000273!GO:0007242;intracellular signaling cascade;0.00356156995224983!GO:0006643;membrane lipid metabolic process;0.00367830904624979!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00378343577804397!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00378343577804397!GO:0045047;protein targeting to ER;0.00378343577804397!GO:0046489;phosphoinositide biosynthetic process;0.00378343749313788!GO:0003729;mRNA binding;0.00378343749313788!GO:0006414;translational elongation;0.00387192347249966!GO:0006979;response to oxidative stress;0.00405744993891809!GO:0008186;RNA-dependent ATPase activity;0.00405744993891809!GO:0043065;positive regulation of apoptosis;0.00423577371298775!GO:0015992;proton transport;0.00429546988766543!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00434604261762741!GO:0065007;biological regulation;0.00441096433104209!GO:0003899;DNA-directed RNA polymerase activity;0.0044994931451598!GO:0030027;lamellipodium;0.00453690459749281!GO:0030127;COPII vesicle coat;0.00458911886964189!GO:0012507;ER to Golgi transport vesicle membrane;0.00458911886964189!GO:0006626;protein targeting to mitochondrion;0.00467469254426272!GO:0006818;hydrogen transport;0.00470700450113108!GO:0032940;secretion by cell;0.00471216430066658!GO:0051252;regulation of RNA metabolic process;0.00474873995605079!GO:0040008;regulation of growth;0.00483292278713645!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00498270470478882!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00498270470478882!GO:0006334;nucleosome assembly;0.00513288506705294!GO:0003690;double-stranded DNA binding;0.00522313914311259!GO:0030119;AP-type membrane coat adaptor complex;0.00524394978302125!GO:0043068;positive regulation of programmed cell death;0.00543960811233001!GO:0030521;androgen receptor signaling pathway;0.00548328526636348!GO:0030125;clathrin vesicle coat;0.00548818190336214!GO:0030665;clathrin coated vesicle membrane;0.00548818190336214!GO:0006509;membrane protein ectodomain proteolysis;0.00550481532607795!GO:0033619;membrane protein proteolysis;0.00550481532607795!GO:0017166;vinculin binding;0.00552407398923366!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00574958525667517!GO:0051287;NAD binding;0.00575723826135515!GO:0031902;late endosome membrane;0.00602671737326955!GO:0051329;interphase of mitotic cell cycle;0.00631915321708983!GO:0016860;intramolecular oxidoreductase activity;0.00631915321708983!GO:0022406;membrane docking;0.00642756326394021!GO:0048278;vesicle docking;0.00642756326394021!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00645353376138518!GO:0031543;peptidyl-proline dioxygenase activity;0.00645353376138518!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00654345044747925!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00654345044747925!GO:0033673;negative regulation of kinase activity;0.00681217668565997!GO:0006469;negative regulation of protein kinase activity;0.00681217668565997!GO:0031418;L-ascorbic acid binding;0.00681234663576554!GO:0046519;sphingoid metabolic process;0.00692130479374009!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00700185422881482!GO:0043284;biopolymer biosynthetic process;0.00703651581169107!GO:0007006;mitochondrial membrane organization and biogenesis;0.0072337530377251!GO:0008312;7S RNA binding;0.00743207349081355!GO:0046483;heterocycle metabolic process;0.00753635041012558!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00755680823375525!GO:0030384;phosphoinositide metabolic process;0.00785852098694422!GO:0043433;negative regulation of transcription factor activity;0.0079168166978783!GO:0005869;dynactin complex;0.00816636673921328!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00817347563909573!GO:0015399;primary active transmembrane transporter activity;0.00817347563909573!GO:0043488;regulation of mRNA stability;0.00817745711559637!GO:0043487;regulation of RNA stability;0.00817745711559637!GO:0051325;interphase;0.00835245330242114!GO:0045893;positive regulation of transcription, DNA-dependent;0.0083666902285215!GO:0006904;vesicle docking during exocytosis;0.0083666902285215!GO:0006740;NADPH regeneration;0.00843910647180374!GO:0006098;pentose-phosphate shunt;0.00843910647180374!GO:0006595;polyamine metabolic process;0.0085779410441108!GO:0008180;signalosome;0.00871506097094524!GO:0008139;nuclear localization sequence binding;0.00874680890378528!GO:0051087;chaperone binding;0.00895536117133972!GO:0051348;negative regulation of transferase activity;0.00907077104810184!GO:0005684;U2-dependent spliceosome;0.00913086628904586!GO:0048487;beta-tubulin binding;0.00926512767010202!GO:0050681;androgen receptor binding;0.00927033241517248!GO:0051270;regulation of cell motility;0.00940843693747589!GO:0004004;ATP-dependent RNA helicase activity;0.00956919471744338!GO:0051101;regulation of DNA binding;0.00960272152350503!GO:0045941;positive regulation of transcription;0.00964982708566653!GO:0030131;clathrin adaptor complex;0.00968138922205302!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00970227201829229!GO:0031497;chromatin assembly;0.00991607053610239!GO:0006778;porphyrin metabolic process;0.0100564186804337!GO:0033013;tetrapyrrole metabolic process;0.0100564186804337!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0103388218633661!GO:0019798;procollagen-proline dioxygenase activity;0.0104688546311469!GO:0003746;translation elongation factor activity;0.0105587695008235!GO:0006672;ceramide metabolic process;0.0105587695008235!GO:0000339;RNA cap binding;0.0108176598731563!GO:0030433;ER-associated protein catabolic process;0.0108496105724306!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0108496105724306!GO:0006892;post-Golgi vesicle-mediated transport;0.0109393671101503!GO:0015631;tubulin binding;0.0109463609977535!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0109994354103837!GO:0006383;transcription from RNA polymerase III promoter;0.0112463662641166!GO:0050790;regulation of catalytic activity;0.012299969631726!GO:0051168;nuclear export;0.0123684983835717!GO:0005096;GTPase activator activity;0.0124584802650151!GO:0006007;glucose catabolic process;0.0128520983822047!GO:0008637;apoptotic mitochondrial changes;0.0131032762066366!GO:0005862;muscle thin filament tropomyosin;0.0132425313388439!GO:0043022;ribosome binding;0.0132810836799208!GO:0001516;prostaglandin biosynthetic process;0.013648011261677!GO:0046457;prostanoid biosynthetic process;0.013648011261677!GO:0030032;lamellipodium biogenesis;0.0140122112375422!GO:0007040;lysosome organization and biogenesis;0.0140122112375422!GO:0000096;sulfur amino acid metabolic process;0.0140351694005889!GO:0007034;vacuolar transport;0.0140417355710341!GO:0006739;NADP metabolic process;0.0145085306472248!GO:0016408;C-acyltransferase activity;0.0149829504776963!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0152697764359443!GO:0007030;Golgi organization and biogenesis;0.01531075095588!GO:0045936;negative regulation of phosphate metabolic process;0.015335780097249!GO:0019752;carboxylic acid metabolic process;0.015335780097249!GO:0045792;negative regulation of cell size;0.015335780097249!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0154099379847281!GO:0006082;organic acid metabolic process;0.0155167317209045!GO:0016272;prefoldin complex;0.0158622374814584!GO:0030308;negative regulation of cell growth;0.0159107915222409!GO:0006769;nicotinamide metabolic process;0.0159751321299217!GO:0031529;ruffle organization and biogenesis;0.0160034715401701!GO:0005832;chaperonin-containing T-complex;0.016178838112767!GO:0006644;phospholipid metabolic process;0.0163283567513438!GO:0022890;inorganic cation transmembrane transporter activity;0.0163650134011515!GO:0006984;ER-nuclear signaling pathway;0.0167729363485011!GO:0006720;isoprenoid metabolic process;0.0168437650614364!GO:0051128;regulation of cellular component organization and biogenesis;0.0171735199650864!GO:0030041;actin filament polymerization;0.0172486355635607!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0172486355635607!GO:0015002;heme-copper terminal oxidase activity;0.0172486355635607!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0172486355635607!GO:0004129;cytochrome-c oxidase activity;0.0172486355635607!GO:0004177;aminopeptidase activity;0.0175208410675698!GO:0051540;metal cluster binding;0.0175208410675698!GO:0051536;iron-sulfur cluster binding;0.0175208410675698!GO:0042168;heme metabolic process;0.0179563596349589!GO:0040011;locomotion;0.0182323780499437!GO:0007033;vacuole organization and biogenesis;0.0182786532427678!GO:0000059;protein import into nucleus, docking;0.0184372978103863!GO:0051272;positive regulation of cell motility;0.0184392555274736!GO:0040017;positive regulation of locomotion;0.0184392555274736!GO:0000209;protein polyubiquitination;0.0185579200133636!GO:0031625;ubiquitin protein ligase binding;0.0192100636654344!GO:0006790;sulfur metabolic process;0.0192100636654344!GO:0030518;steroid hormone receptor signaling pathway;0.0193651799222758!GO:0016125;sterol metabolic process;0.0193946889208206!GO:0005774;vacuolar membrane;0.0197243732901165!GO:0006417;regulation of translation;0.0198696561081171!GO:0008234;cysteine-type peptidase activity;0.0200960144817664!GO:0000049;tRNA binding;0.0202977254167587!GO:0016251;general RNA polymerase II transcription factor activity;0.0203277359886477!GO:0040012;regulation of locomotion;0.0204094603602578!GO:0006950;response to stress;0.0204226450275758!GO:0007021;tubulin folding;0.0204475832444537!GO:0006402;mRNA catabolic process;0.0205890803864041!GO:0051090;regulation of transcription factor activity;0.0215896377864901!GO:0004674;protein serine/threonine kinase activity;0.0219733799174755!GO:0003756;protein disulfide isomerase activity;0.0221071080491662!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0221071080491662!GO:0030833;regulation of actin filament polymerization;0.0230161875058111!GO:0030880;RNA polymerase complex;0.0231852669208397!GO:0005637;nuclear inner membrane;0.0233122201799617!GO:0000279;M phase;0.0233478583234405!GO:0050662;coenzyme binding;0.0233932459386253!GO:0044255;cellular lipid metabolic process;0.0237331862375108!GO:0006897;endocytosis;0.0239605604496225!GO:0010324;membrane invagination;0.0239605604496225!GO:0006497;protein amino acid lipidation;0.0239605604496225!GO:0006767;water-soluble vitamin metabolic process;0.0239605604496225!GO:0031301;integral to organelle membrane;0.0243099105390054!GO:0046426;negative regulation of JAK-STAT cascade;0.0251468736104827!GO:0030031;cell projection biogenesis;0.0256823401367461!GO:0006917;induction of apoptosis;0.0259799727968745!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0261049626686462!GO:0009966;regulation of signal transduction;0.0266878729464744!GO:0008283;cell proliferation;0.0273114055211862!GO:0006066;alcohol metabolic process;0.0274469874771005!GO:0004860;protein kinase inhibitor activity;0.0275253643382923!GO:0035035;histone acetyltransferase binding;0.028175138513118!GO:0050811;GABA receptor binding;0.0281979147814368!GO:0003711;transcription elongation regulator activity;0.0287772499236567!GO:0030145;manganese ion binding;0.0288709079140387!GO:0006352;transcription initiation;0.0289074093135547!GO:0051059;NF-kappaB binding;0.0289074093135547!GO:0045892;negative regulation of transcription, DNA-dependent;0.0292051762906525!GO:0005586;collagen type III;0.0299053145666551!GO:0005874;microtubule;0.0300238381341775!GO:0019318;hexose metabolic process;0.0312094398275294!GO:0007265;Ras protein signal transduction;0.0326484214985639!GO:0031124;mRNA 3'-end processing;0.0334819129023602!GO:0004287;prolyl oligopeptidase activity;0.0335952725631366!GO:0051539;4 iron, 4 sulfur cluster binding;0.0336493785708979!GO:0030503;regulation of cell redox homeostasis;0.0336493785708979!GO:0042326;negative regulation of phosphorylation;0.0338830572167695!GO:0012502;induction of programmed cell death;0.0340391129857678!GO:0008033;tRNA processing;0.0341517506089941!GO:0005581;collagen;0.0342185026699896!GO:0006779;porphyrin biosynthetic process;0.0348443387844896!GO:0033014;tetrapyrrole biosynthetic process;0.0348443387844896!GO:0030508;thiol-disulfide exchange intermediate activity;0.0350663751988696!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0362921057522423!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0362921057522423!GO:0008154;actin polymerization and/or depolymerization;0.0366953542995831!GO:0030149;sphingolipid catabolic process;0.0375206883275113!GO:0016584;nucleosome positioning;0.0375213318916889!GO:0033559;unsaturated fatty acid metabolic process;0.0385654801785167!GO:0006636;unsaturated fatty acid biosynthetic process;0.0385654801785167!GO:0031371;ubiquitin conjugating enzyme complex;0.0386748697586657!GO:0005996;monosaccharide metabolic process;0.0389433448342282!GO:0043492;ATPase activity, coupled to movement of substances;0.0392267807146887!GO:0006506;GPI anchor biosynthetic process;0.0394391508859057!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0396810203117845!GO:0000428;DNA-directed RNA polymerase complex;0.0396810203117845!GO:0004448;isocitrate dehydrogenase activity;0.0397513983125237!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0399069411603261!GO:0008652;amino acid biosynthetic process;0.0400174868934733!GO:0051098;regulation of binding;0.0400778388067636!GO:0008538;proteasome activator activity;0.0403662239609785!GO:0005784;translocon complex;0.0404240721624675!GO:0005100;Rho GTPase activator activity;0.0408423594018546!GO:0004722;protein serine/threonine phosphatase activity;0.0411603763950865!GO:0006693;prostaglandin metabolic process;0.0420197746300849!GO:0006692;prostanoid metabolic process;0.0420197746300849!GO:0022408;negative regulation of cell-cell adhesion;0.042340881994766!GO:0005801;cis-Golgi network;0.0424021536660127!GO:0006520;amino acid metabolic process;0.0428521050023335!GO:0006733;oxidoreduction coenzyme metabolic process;0.0436324388803764!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0436626186943593!GO:0006289;nucleotide-excision repair;0.0439400044917822!GO:0030911;TPR domain binding;0.0440527665106078!GO:0019362;pyridine nucleotide metabolic process;0.0444349567894072!GO:0001952;regulation of cell-matrix adhesion;0.0452357731506798!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0452357731506798!GO:0051092;activation of NF-kappaB transcription factor;0.0453547628242158!GO:0006505;GPI anchor metabolic process;0.0456774970558153!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0457319553221402!GO:0007041;lysosomal transport;0.0457319553221402!GO:0005938;cell cortex;0.0457319553221402!GO:0006354;RNA elongation;0.0457319553221402!GO:0044437;vacuolar part;0.0458516899602946!GO:0004721;phosphoprotein phosphatase activity;0.0459207802044441!GO:0048144;fibroblast proliferation;0.0461568362207449!GO:0048145;regulation of fibroblast proliferation;0.0461568362207449!GO:0006458;'de novo' protein folding;0.0466120641061577!GO:0051084;'de novo' posttranslational protein folding;0.0466120641061577!GO:0008097;5S rRNA binding;0.0466120641061577!GO:0006611;protein export from nucleus;0.0477369863726232!GO:0046822;regulation of nucleocytoplasmic transport;0.0477920213064996!GO:0030100;regulation of endocytosis;0.048078814647839!GO:0009225;nucleotide-sugar metabolic process;0.0482833434269003!GO:0016791;phosphoric monoester hydrolase activity;0.0487652350627332!GO:0016301;kinase activity;0.0488475463725552!GO:0005975;carbohydrate metabolic process;0.0490698134545207!GO:0005765;lysosomal membrane;0.0495593565521061 | |||
|sample_id=11761 | |sample_id=11761 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=NKX3-1:2.05983490507;HOX{A5,B5}:1.58606512693;HIF1A:1.50666156921;GZF1:1.41433368728;HSF1,2:1.37076750346;GLI1..3:1.27597892432;TAL1_TCF{3,4,12}:1.0938782662;RXRA_VDR{dimer}:1.02355135031;AIRE:1.00179438387;PAX4:0.938982465782;bHLH_family:0.89974520256;UFEwm:0.898755792166;ATF6:0.894956009515;MAFB:0.892707174104;ONECUT1,2:0.880885753528;NFATC1..3:0.87670749698;EVI1:0.867714669723;ALX4:0.846199202749;TBX4,5:0.80263756004;EBF1:0.79945794303;HMGA1,2:0.786710498759;TFCP2:0.769459718709;TEAD1:0.735189866607;EN1,2:0.715991577764;NFE2L2:0.705175314324;XCPE1{core}:0.695909347408;TLX1..3_NFIC{dimer}:0.667934623254;ZNF238:0.667803395295;ZIC1..3:0.66445284597;SPZ1:0.655058894534;HOX{A4,D4}:0.647144257472;ZNF148:0.623071788512;NANOG{mouse}:0.612111925143;MAZ:0.598834002432;NKX2-1,4:0.590422015415;CRX:0.572509974768;CDC5L:0.565829363734;PRDM1:0.558236539507;MYBL2:0.557143864383;HBP1_HMGB_SSRP1_UBTF:0.527686969392;FOX{I1,J2}:0.525176655512;ZNF384:0.500761646649;BACH2:0.496898446405;MZF1:0.496804773553;NR6A1:0.493856973596;GTF2I:0.477099723596;NFIX:0.462273323946;IKZF1:0.460446447749;PAX1,9:0.440750207996;ZBTB16:0.436333225518;EP300:0.435548636033;TEF:0.424157815483;SRF:0.417552660995;TBP:0.410319133294;TP53:0.40432680729;NFE2L1:0.404202452622;SMAD1..7,9:0.402054653672;FOS_FOS{B,L1}_JUN{B,D}:0.400695846467;PAX8:0.399880227738;HMX1:0.393213651296;ZBTB6:0.377490475599;KLF4:0.376287178078;PAX5:0.370065321268;SOX2:0.369677613244;PAX2:0.364337389456;ESR1:0.363229776587;HLF:0.354232250357;FOSL2:0.347766907885;NFE2:0.332256812132;SP1:0.330351065305;XBP1:0.327932947727;GTF2A1,2:0.312488146231;RXR{A,B,G}:0.307828075458;DBP:0.300079332182;SOX17:0.285300405549;HOXA9_MEIS1:0.269140801762;PATZ1:0.256455140892;AR:0.255056268297;GFI1B:0.240641092915;TLX2:0.236356676639;RREB1:0.221906795318;HES1:0.21683071392;NR3C1:0.203265062501;NFKB1_REL_RELA:0.196579893535;STAT2,4,6:0.181873429075;GCM1,2:0.175422050917;AHR_ARNT_ARNT2:0.175182365295;ZNF423:0.157437880175;CEBPA,B_DDIT3:0.155189225033;TFAP2B:0.15410300408;GATA4:0.152273029613;MTE{core}:0.143361900249;RFX1:0.143105191672;POU6F1:0.122430485272;REST:0.112895751168;NHLH1,2:0.102935845444;NKX3-2:0.0940281178519;FOXD3:0.0926542235069;EGR1..3:0.0874433297114;CDX1,2,4:0.0819459134014;RUNX1..3:0.0779408803912;TFAP2{A,C}:0.0737207448415;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0632479277815;ALX1:0.0414061416441;LEF1_TCF7_TCF7L1,2:0.0328684357371;POU3F1..4:0.0318910282347;LHX3,4:0.0174190725071;NKX2-2,8:0.00822571573369;FOXM1:0.00685855790127;FOXQ1:0.00201722719764;SREBF1,2:-0.00710842506005;STAT5{A,B}:-0.00748005211093;ZFP161:-0.0167261177692;HNF1A:-0.0312000510335;HIC1:-0.0394596059812;ELK1,4_GABP{A,B1}:-0.0446350243558;ATF5_CREB3:-0.048992361258;POU5F1:-0.058947510173;LMO2:-0.066843831089;NR1H4:-0.0841111601571;NFIL3:-0.101902978828;MTF1:-0.107680707101;IRF7:-0.135017589975;ATF2:-0.136388425344;TFAP4:-0.139054140597;PAX6:-0.141459186292;MYFfamily:-0.145882415157;ARID5B:-0.157915625112;PPARG:-0.159594630493;CREB1:-0.168043947433;IRF1,2:-0.169042384411;NRF1:-0.204350904052;JUN:-0.214688069354;TOPORS:-0.223941169599;GATA6:-0.23306650337;ADNP_IRX_SIX_ZHX:-0.236061697886;DMAP1_NCOR{1,2}_SMARC:-0.248983503665;PBX1:-0.249225434458;ZEB1:-0.263868765992;ATF4:-0.275199706491;MED-1{core}:-0.286657961364;NFY{A,B,C}:-0.290288365533;POU1F1:-0.300111880384;ZNF143:-0.304429165303;PRRX1,2:-0.310652579365;BPTF:-0.314922794923;ETS1,2:-0.318018243458;HNF4A_NR2F1,2:-0.324930045603;NKX6-1,2:-0.351484463421;STAT1,3:-0.353488030707;FOXO1,3,4:-0.368193378863;FOX{D1,D2}:-0.372035929229;SPI1:-0.376931817751;PAX3,7:-0.378579207599;SNAI1..3:-0.393189884447;GFI1:-0.402389385348;IKZF2:-0.4155418014;TFDP1:-0.426101786392;FOXN1:-0.445459170156;ELF1,2,4:-0.450387867936;RBPJ:-0.471768830176;POU2F1..3:-0.48309784967;FOXL1:-0.484763834446;FOXP3:-0.49116213951;MYOD1:-0.501767748322;MEF2{A,B,C,D}:-0.523682136657;FOXP1:-0.538227753669;OCT4_SOX2{dimer}:-0.548585842582;YY1:-0.576956626494;TGIF1:-0.59868857244;SOX{8,9,10}:-0.615268673228;CUX2:-0.619615322318;HAND1,2:-0.621239302378;E2F1..5:-0.639320728904;FOXA2:-0.654891724934;SOX5:-0.656079060926;SPIB:-0.66125846662;T:-0.691551607906;MYB:-0.697007038002;RFX2..5_RFXANK_RFXAP:-0.720754107483;NKX2-3_NKX2-5:-0.818389131744;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.863483063632;ESRRA:-0.872271545698;RORA:-0.934111139065;NR5A1,2:-0.995519239393;BREu{core}:-1.0777301698;FOX{F1,F2,J1}:-1.08038560535;PDX1:-1.1268036819;NANOG:-1.18778875611;PITX1..3:-1.21997652358;HOX{A6,A7,B6,B7}:-1.49892934432;VSX1,2:-1.60229601381 | |top_motifs=NKX3-1:2.05983490507;HOX{A5,B5}:1.58606512693;HIF1A:1.50666156921;GZF1:1.41433368728;HSF1,2:1.37076750346;GLI1..3:1.27597892432;TAL1_TCF{3,4,12}:1.0938782662;RXRA_VDR{dimer}:1.02355135031;AIRE:1.00179438387;PAX4:0.938982465782;bHLH_family:0.89974520256;UFEwm:0.898755792166;ATF6:0.894956009515;MAFB:0.892707174104;ONECUT1,2:0.880885753528;NFATC1..3:0.87670749698;EVI1:0.867714669723;ALX4:0.846199202749;TBX4,5:0.80263756004;EBF1:0.79945794303;HMGA1,2:0.786710498759;TFCP2:0.769459718709;TEAD1:0.735189866607;EN1,2:0.715991577764;NFE2L2:0.705175314324;XCPE1{core}:0.695909347408;TLX1..3_NFIC{dimer}:0.667934623254;ZNF238:0.667803395295;ZIC1..3:0.66445284597;SPZ1:0.655058894534;HOX{A4,D4}:0.647144257472;ZNF148:0.623071788512;NANOG{mouse}:0.612111925143;MAZ:0.598834002432;NKX2-1,4:0.590422015415;CRX:0.572509974768;CDC5L:0.565829363734;PRDM1:0.558236539507;MYBL2:0.557143864383;HBP1_HMGB_SSRP1_UBTF:0.527686969392;FOX{I1,J2}:0.525176655512;ZNF384:0.500761646649;BACH2:0.496898446405;MZF1:0.496804773553;NR6A1:0.493856973596;GTF2I:0.477099723596;NFIX:0.462273323946;IKZF1:0.460446447749;PAX1,9:0.440750207996;ZBTB16:0.436333225518;EP300:0.435548636033;TEF:0.424157815483;SRF:0.417552660995;TBP:0.410319133294;TP53:0.40432680729;NFE2L1:0.404202452622;SMAD1..7,9:0.402054653672;FOS_FOS{B,L1}_JUN{B,D}:0.400695846467;PAX8:0.399880227738;HMX1:0.393213651296;ZBTB6:0.377490475599;KLF4:0.376287178078;PAX5:0.370065321268;SOX2:0.369677613244;PAX2:0.364337389456;ESR1:0.363229776587;HLF:0.354232250357;FOSL2:0.347766907885;NFE2:0.332256812132;SP1:0.330351065305;XBP1:0.327932947727;GTF2A1,2:0.312488146231;RXR{A,B,G}:0.307828075458;DBP:0.300079332182;SOX17:0.285300405549;HOXA9_MEIS1:0.269140801762;PATZ1:0.256455140892;AR:0.255056268297;GFI1B:0.240641092915;TLX2:0.236356676639;RREB1:0.221906795318;HES1:0.21683071392;NR3C1:0.203265062501;NFKB1_REL_RELA:0.196579893535;STAT2,4,6:0.181873429075;GCM1,2:0.175422050917;AHR_ARNT_ARNT2:0.175182365295;ZNF423:0.157437880175;CEBPA,B_DDIT3:0.155189225033;TFAP2B:0.15410300408;GATA4:0.152273029613;MTE{core}:0.143361900249;RFX1:0.143105191672;POU6F1:0.122430485272;REST:0.112895751168;NHLH1,2:0.102935845444;NKX3-2:0.0940281178519;FOXD3:0.0926542235069;EGR1..3:0.0874433297114;CDX1,2,4:0.0819459134014;RUNX1..3:0.0779408803912;TFAP2{A,C}:0.0737207448415;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0632479277815;ALX1:0.0414061416441;LEF1_TCF7_TCF7L1,2:0.0328684357371;POU3F1..4:0.0318910282347;LHX3,4:0.0174190725071;NKX2-2,8:0.00822571573369;FOXM1:0.00685855790127;FOXQ1:0.00201722719764;SREBF1,2:-0.00710842506005;STAT5{A,B}:-0.00748005211093;ZFP161:-0.0167261177692;HNF1A:-0.0312000510335;HIC1:-0.0394596059812;ELK1,4_GABP{A,B1}:-0.0446350243558;ATF5_CREB3:-0.048992361258;POU5F1:-0.058947510173;LMO2:-0.066843831089;NR1H4:-0.0841111601571;NFIL3:-0.101902978828;MTF1:-0.107680707101;IRF7:-0.135017589975;ATF2:-0.136388425344;TFAP4:-0.139054140597;PAX6:-0.141459186292;MYFfamily:-0.145882415157;ARID5B:-0.157915625112;PPARG:-0.159594630493;CREB1:-0.168043947433;IRF1,2:-0.169042384411;NRF1:-0.204350904052;JUN:-0.214688069354;TOPORS:-0.223941169599;GATA6:-0.23306650337;ADNP_IRX_SIX_ZHX:-0.236061697886;DMAP1_NCOR{1,2}_SMARC:-0.248983503665;PBX1:-0.249225434458;ZEB1:-0.263868765992;ATF4:-0.275199706491;MED-1{core}:-0.286657961364;NFY{A,B,C}:-0.290288365533;POU1F1:-0.300111880384;ZNF143:-0.304429165303;PRRX1,2:-0.310652579365;BPTF:-0.314922794923;ETS1,2:-0.318018243458;HNF4A_NR2F1,2:-0.324930045603;NKX6-1,2:-0.351484463421;STAT1,3:-0.353488030707;FOXO1,3,4:-0.368193378863;FOX{D1,D2}:-0.372035929229;SPI1:-0.376931817751;PAX3,7:-0.378579207599;SNAI1..3:-0.393189884447;GFI1:-0.402389385348;IKZF2:-0.4155418014;TFDP1:-0.426101786392;FOXN1:-0.445459170156;ELF1,2,4:-0.450387867936;RBPJ:-0.471768830176;POU2F1..3:-0.48309784967;FOXL1:-0.484763834446;FOXP3:-0.49116213951;MYOD1:-0.501767748322;MEF2{A,B,C,D}:-0.523682136657;FOXP1:-0.538227753669;OCT4_SOX2{dimer}:-0.548585842582;YY1:-0.576956626494;TGIF1:-0.59868857244;SOX{8,9,10}:-0.615268673228;CUX2:-0.619615322318;HAND1,2:-0.621239302378;E2F1..5:-0.639320728904;FOXA2:-0.654891724934;SOX5:-0.656079060926;SPIB:-0.66125846662;T:-0.691551607906;MYB:-0.697007038002;RFX2..5_RFXANK_RFXAP:-0.720754107483;NKX2-3_NKX2-5:-0.818389131744;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.863483063632;ESRRA:-0.872271545698;RORA:-0.934111139065;NR5A1,2:-0.995519239393;BREu{core}:-1.0777301698;FOX{F1,F2,J1}:-1.08038560535;PDX1:-1.1268036819;NANOG:-1.18778875611;PITX1..3:-1.21997652358;HOX{A6,A7,B6,B7}:-1.49892934432;VSX1,2:-1.60229601381 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11761-123H6;search_select_hide=table117:FF:11761-123H6 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02) |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12377 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12377
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12377
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.238 |
| 10 | 10 | 0.09 |
| 100 | 100 | 0.666 |
| 101 | 101 | 0.529 |
| 102 | 102 | 0.0946 |
| 103 | 103 | 0.777 |
| 104 | 104 | 0.903 |
| 105 | 105 | 0.453 |
| 106 | 106 | 0.16 |
| 107 | 107 | 0.499 |
| 108 | 108 | 0.673 |
| 109 | 109 | 0.228 |
| 11 | 11 | 0.735 |
| 110 | 110 | 0.341 |
| 111 | 111 | 0.0408 |
| 112 | 112 | 0.78 |
| 113 | 113 | 0.00182 |
| 114 | 114 | 0.789 |
| 115 | 115 | 0.339 |
| 116 | 116 | 0.506 |
| 117 | 117 | 0.473 |
| 118 | 118 | 0.791 |
| 119 | 119 | 0.365 |
| 12 | 12 | 0.187 |
| 120 | 120 | 0.15 |
| 121 | 121 | 0.794 |
| 122 | 122 | 0.164 |
| 123 | 123 | 4.9331e-5 |
| 124 | 124 | 0.116 |
| 125 | 125 | 0.326 |
| 126 | 126 | 0.733 |
| 127 | 127 | 0.773 |
| 128 | 128 | 0.735 |
| 129 | 129 | 0.791 |
| 13 | 13 | 0.694 |
| 130 | 130 | 0.768 |
| 131 | 131 | 0.363 |
| 132 | 132 | 0.549 |
| 133 | 133 | 0.413 |
| 134 | 134 | 0.726 |
| 135 | 135 | 0.348 |
| 136 | 136 | 0.738 |
| 137 | 137 | 0.37 |
| 138 | 138 | 0.937 |
| 139 | 139 | 0.423 |
| 14 | 14 | 0.299 |
| 140 | 140 | 0.73 |
| 141 | 141 | 0.396 |
| 142 | 142 | 0.381 |
| 143 | 143 | 0.795 |
| 144 | 144 | 0.759 |
| 145 | 145 | 0.698 |
| 146 | 146 | 0.917 |
| 147 | 147 | 0.106 |
| 148 | 148 | 0.572 |
| 149 | 149 | 0.466 |
| 15 | 15 | 0.836 |
| 150 | 150 | 0.41 |
| 151 | 151 | 0.639 |
| 152 | 152 | 0.0321 |
| 153 | 153 | 0.914 |
| 154 | 154 | 0.944 |
| 155 | 155 | 0.00188 |
| 156 | 156 | 0.163 |
| 157 | 157 | 0.976 |
| 158 | 158 | 0.00421 |
| 159 | 159 | 0.383 |
| 16 | 16 | 0.126 |
| 160 | 160 | 0.736 |
| 161 | 161 | 0.656 |
| 162 | 162 | 0.84 |
| 163 | 163 | 0.0437 |
| 164 | 164 | 0.297 |
| 165 | 165 | 0.95 |
| 166 | 166 | 0.484 |
| 167 | 167 | 0.0791 |
| 168 | 168 | 0.672 |
| 169 | 169 | 0.306 |
| 17 | 17 | 0.945 |
| 18 | 18 | 0.404 |
| 19 | 19 | 0.715 |
| 2 | 2 | 0.352 |
| 20 | 20 | 0.76 |
| 21 | 21 | 0.994 |
| 22 | 22 | 0.942 |
| 23 | 23 | 0.0459 |
| 24 | 24 | 0.997 |
| 25 | 25 | 0.0366 |
| 26 | 26 | 0.611 |
| 27 | 27 | 0.993 |
| 28 | 28 | 0.871 |
| 29 | 29 | 0.635 |
| 3 | 3 | 0.556 |
| 30 | 30 | 0.549 |
| 31 | 31 | 0.929 |
| 32 | 32 | 2.89137e-7 |
| 33 | 33 | 0.876 |
| 34 | 34 | 0.919 |
| 35 | 35 | 0.413 |
| 36 | 36 | 0.0231 |
| 37 | 37 | 0.147 |
| 38 | 38 | 0.167 |
| 39 | 39 | 0.129 |
| 4 | 4 | 0.11 |
| 40 | 40 | 0.154 |
| 41 | 41 | 0.223 |
| 42 | 42 | 0.267 |
| 43 | 43 | 0.561 |
| 44 | 44 | 0.934 |
| 45 | 45 | 0.949 |
| 46 | 46 | 0.52 |
| 47 | 47 | 0.135 |
| 48 | 48 | 0.59 |
| 49 | 49 | 0.00856 |
| 5 | 5 | 0.586 |
| 50 | 50 | 0.899 |
| 51 | 51 | 0.847 |
| 52 | 52 | 0.748 |
| 53 | 53 | 0.026 |
| 54 | 54 | 0.904 |
| 55 | 55 | 0.164 |
| 56 | 56 | 0.47 |
| 57 | 57 | 0.456 |
| 58 | 58 | 0.0765 |
| 59 | 59 | 0.977 |
| 6 | 6 | 0.732 |
| 60 | 60 | 0.838 |
| 61 | 61 | 0.439 |
| 62 | 62 | 0.225 |
| 63 | 63 | 0.881 |
| 64 | 64 | 0.556 |
| 65 | 65 | 0.867 |
| 66 | 66 | 0.416 |
| 67 | 67 | 0.901 |
| 68 | 68 | 0.47 |
| 69 | 69 | 0.176 |
| 7 | 7 | 0.0665 |
| 70 | 70 | 0.427 |
| 71 | 71 | 0.422 |
| 72 | 72 | 0.213 |
| 73 | 73 | 0.105 |
| 74 | 74 | 0.354 |
| 75 | 75 | 0.742 |
| 76 | 76 | 0.677 |
| 77 | 77 | 0.0793 |
| 78 | 78 | 0.0545 |
| 79 | 79 | 0.0104 |
| 8 | 8 | 0.758 |
| 80 | 80 | 0.73 |
| 81 | 81 | 0.267 |
| 82 | 82 | 0.77 |
| 83 | 83 | 0.824 |
| 84 | 84 | 0.76 |
| 85 | 85 | 0.321 |
| 86 | 86 | 0.937 |
| 87 | 87 | 0.341 |
| 88 | 88 | 0.962 |
| 89 | 89 | 0.724 |
| 9 | 9 | 0.725 |
| 90 | 90 | 0.181 |
| 91 | 91 | 0.871 |
| 92 | 92 | 0.733 |
| 93 | 93 | 0.812 |
| 94 | 94 | 0.927 |
| 95 | 95 | 0.794 |
| 96 | 96 | 0.356 |
| 97 | 97 | 0.221 |
| 98 | 98 | 6.27279e-4 |
| 99 | 99 | 0.12 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12377
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000275 human mesenchymal precursor cell- ovarian cancer-right ovary sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
