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{{f5samples
{{f5samples
|id=FF:11843-124H7
|DRA_sample_Accession=CAGE@SAMD00005193
|name=serous adenocarcinoma cell line:SK-OV-3-R after co-culture with SOC-57-02-G, biol_rep1
|accession_numbers=CAGE;DRX007999;DRR008871;DRZ000296;DRZ001681;DRZ011646;DRZ013031
|sample_id=11843
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
|rna_tube_id=124H7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000499,CL:0000255,CL:0002076,CL:0002149,CL:0002255
|rna_box=124
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:193,DOID:305,DOID:120,DOID:299,DOID:3001
|rna_position=H7
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0000350,FF:0103803,FF:0100297,FF:0101120,FF:0100167,FF:0100658,FF:0101555
|sample_cell_lot=SKOV-3-R-CC
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!1.98!95.54!PAX8;;chr8:55370487..55370503,+!p1@SOX17!1.64!42.19!SOX17;;chr17:46675558..46675577,-!p2@HOXB6!1.56!35.67!HOXB6;;chr19:3574330..3574393,+!p2@HMG20B!1.34!21.09!HMG20B;;chr1:201979743..201979762,+!p1@ELF3!1.34!20.78!ELF3;;chr19:45971246..45971265,+!p1@FOSB!1.29!333.16!FOSB;;chr17:46682321..46682362,-!p1@HOXB6!1.29!18.30!HOXB6;;chr3:5021268..5021282,+!p4@BHLHE40!1.25!34.12!BHLHE40;;chr8:72756063..72756125,-!p1@MSC!1.24!32.88!MSC;;chr20:2673383..2673441,+!p1@EBF4!1.22!24.82!EBF4;;chr1:201979703..201979721,+!p2@ELF3!1.21!15.20!ELF3;;chr17:46692624..46692659,-!p3@HOXB8!1.16!13.34!HOXB8;;chr17:46687959..46688007,-!p2@HOXB7!1.14!17.68!HOXB7;;chr1:37940170..37940190,+!p1@ZC3H12A!1.13!154.48!ZC3H12A;;chr17:46688334..46688385,-!p1@HOXB7!1.11!17.06!HOXB7;;chr17:38256822..38256851,-!p1@NR1D1!1.06!83.45!NR1D1;;chr3:5021113..5021180,+!p1@BHLHE40!1.03!679.35!BHLHE40;;chr18:77155922..77155939,+!p1@NFATC1!1.02!26.37!NFATC1;;chr17:38256799..38256815,-!p3@NR1D1!1.02!17.37!NR1D1;;chr17:46692457..46692484,-!p2@HOXB8!1.01!9.31!HOXB8;;chr12:85673977..85674015,+!p1@ALX1!1.01!9.31!ALX1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.00!12.72!NFKBIZ;;chr20:50179368..50179392,-!p2@NFATC2!1.00!11.79!NFATC2;;chr17:46675420..46675465,-!p3@HOXB6!1.00!10.55!HOXB6;;chr19:48773337..48773339,+!p2@ZNF114!0.99!8.69!ZNF114;;chr17:46621937..46621966,-!p2@HOXB2!0.96!22.33!HOXB2;;chr10:64018918..64018936,+!p2@ZNF365!0.96!8.07!ZNF365;;chr13:73633131..73633149,+!p1@KLF5!0.95!88.10!KLF5;;chr17:35294075..35294102,+!p1@ENST00000559335!0.94!7.76!LHX1;;chr22:19748231..19748317,+!p1@TBX1!0.94!7.76!TBX1;;chr6:10412600..10412637,-!p1@TFAP2A!0.93!12.72!TFAP2A;;chr14:75745523..75745537,+!p1@FOS!0.92!920.07!FOS;;chr11:61520075..61520136,+!p1@C11orf9!0.91!15.51!C11orf9;;chr17:46690839..46690884,-!p1@HOXB8!0.91!7.13!HOXB8;;chr7:63505799..63505904,+!p1@ZNF727!0.91!7.13!ZNF727;;chr14:35872453..35872485,-!p2@NFKBIA!0.90!17.68!NFKBIA;;chr6:1389789..1389821,+!p1@FOXF2!0.90!9.62!FOXF2;;chr8:49833978..49833996,-!p1@SNAI2!0.89!146.73!SNAI2;;chr1:212782094..212782109,+!p1@ATF3!0.88!187.99!ATF3;;chr8:72755987..72756002,-!p7@MSC!0.88!6.51!MSC;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.88!6.51!ZNF676;;chr7:19157248..19157268,-!p1@TWIST1!0.87!18.61!TWIST1;;chr6:10412392..10412409,-!p4@TFAP2A!0.86!7.13!TFAP2A;;chr18:45935720..45935772,-!p1@ZBTB7C!0.86!6.20!ZBTB7C;;chr5:174151553..174151610,+!p1@MSX2!0.85!10.55!MSX2;;chr8:49833948..49833973,-!p2@SNAI2!0.83!38.78!SNAI2;;chr3:169381420..169381535,-!p1@MECOM!0.83!6.82!MECOM;;chr12:66218255..66218304,+!p3@HMGA2!0.82!16.13!HMGA2;;chr3:5021191..5021202,+!p3@BHLHE40!0.82!15.82!BHLHE40;;chr21:38071430..38071456,+!p1@SIM2!0.82!5.58!SIM2;;chr4:4861385..4861398,+!p1@MSX1!0.81!17.37!MSX1;;chr1:158985493..158985535,+!p4@IFI16!0.81!8.69!IFI16;;chr13:41635029..41635044,-!p4@ELF1!0.80!11.79!ELF1;;chr13:100634031..100634045,+!p1@ZIC2!0.80!5.27!ZIC2;;chr17:46691732..46691766,-!p4@HOXB8!0.80!5.27!HOXB8;;chr17:46703528..46703549,-!p5@HOXB9!0.80!5.27!HOXB9;;chr2:238536207..238536290,+!p2@LRRFIP1!0.79!54.60!LRRFIP1;;chr8:72756267..72756296,-!p4@MSC!0.79!7.76!MSC;;chr5:131826457..131826514,-!p1@IRF1!0.78!217.14!IRF1;;chr12:66218598..66218645,+!p2@HMGA2!0.78!25.13!HMGA2;;chr19:52956798..52956843,+!p1@ZNF578!0.77!10.24!ZNF578;;chr8:72756667..72756736,-!p2@MSC!0.77!8.07!MSC;;chr14:35873947..35873965,-!p1@NFKBIA!0.75!326.03!NFKBIA;;chr17:46692318..46692362,-!p5@HOXB8!0.75!4.65!HOXB8;;chr1:212738742..212738755,+!p2@ATF3!0.75!4.65!ATF3;;chr1:8938709..8938720,-!p3@ENO1!0.74!240.41!ENO1;;chr17:46667594..46667619,-!p1@HOXB3!0.73!4.34!HOXB3;;chr17:46688310..46688323,-!p4@HOXB7!0.73!4.34!HOXB7;;chr13:100634130..100634143,+!p3@ZIC2!0.73!4.34!ZIC2;;chr2:238600998..238601013,+!p5@LRRFIP1!0.73!4.34!LRRFIP1;;chr5:72744594..72744609,-!p1@FOXD1!0.72!21.40!FOXD1;;chr17:46622205..46622218,-!p3@HOXB2!0.72!4.96!HOXB2;;chr6:21597765..21597779,+!p2@SOX4!0.71!37.53!SOX4;;chr8:80679993..80680011,-!p1@HEY1!0.71!6.20!HEY1;;chr8:72756023..72756055,-!p6@MSC!0.71!5.27!MSC;;chr3:101568349..101568365,+!p1@NFKBIZ!0.70!238.24!NFKBIZ;;chr17:56065729..56065781,-!p2@VEZF1!0.70!19.54!VEZF1;;chr5:150284532..150284549,-!p1@ZNF300!0.70!9.00!ZNF300;;chr13:73636516..73636532,+!p3@KLF5!0.70!4.65!KLF5;;chr12:85674018..85674039,+!p3@ALX1!0.70!4.03!ALX1;;chr17:46692603..46692621,-!p6@HOXB8!0.70!4.03!HOXB8;;chr19:47523058..47523114,+!p1@NPAS1!0.70!4.03!NPAS1;;chr21:38071403..38071428,+!p2@SIM2!0.70!4.03!SIM2;;chr6:10415484..10415508,-!p3@TFAP2A!0.70!4.03!TFAP2A;;chr6:21593973..21593988,+!p1@SOX4!0.69!160.07!SOX4;;chr19:36391434..36391450,-!p1@NFKBID!0.69!8.38!NFKBID;;chr12:66218212..66218244,+!p5@HMGA2!0.69!5.89!HMGA2;;chr20:48807351..48807384,+!p1@CEBPB!0.68!452.59!CEBPB;;chr3:193853927..193853944,+!p1@HES1!0.68!142.69!HES1;;chr22:21771656..21771662,+!p1@HIC2!0.67!3.72!HIC2;;chr1:6479968..6479986,-!p1@HES2!0.67!3.72!HES2;;chr16:51185172..51185197,-!p1@SALL1!0.67!3.72!SALL1;;chr17:46675539..46675551,-!p7@HOXB6!0.67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73780879..73780963,+!p1@UNK!0.18!22.65!UNK;;chr14:65569244..65569264,-!p2@MAX!0.18!14.89!MAX;;chr11:615942..615957,-!p1@IRF7!0.18!12.41!IRF7;;chr19:37064145..37064216,-!p1@ZNF529!0.18!10.86!ZNF529;;chr6:28193037..28193086,+!p1@ZNF193!0.18!10.24!ZNF193;;chr3:141868357..141868393,-!p3@TFDP2!0.18!8.38!TFDP2;;chr12:3068544..3068597,+!p1@TEAD4!0.18!7.44!TEAD4;;chr19:21106049..21106072,+!p1@ZNF85!0.18!6.82!ZNF85;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.18!5.89!ZNF20;;chr19:36909528..36909581,-!p1@ZFP82!0.18!5.58!ZFP82;;chr19:22034809..22034878,-!p2@ZNF43!0.18!4.03!ZNF43;;chr19:24097675..24097699,+!p1@ZNF726!0.18!3.72!ZNF726;;chr19:53636125..53636178,-!p1@ZNF415!0.18!3.10!ZNF415;;chr19:37958285..37958317,-!p3@ZNF569!0.18!2.79!ZNF569;;chr1:61548069..61548102,+!p3@NFIA!0.18!2.48!NFIA;;chr22:50247528..50247568,+!p2@ZBED4!0.18!2.48!ZBED4;;chr2:187350951..187350962,+!p2@ZC3H15!0.18!2.48!ZC3H15;;chr6:20403727..20403769,+!p4@E2F3!0.18!2.48!E2F3;;chr22:46546494..46546525,+!p2@PPARA!0.18!1.86!PPARA;;chr4:87857474..87857489,+!p7@AFF1!0.18!1.55!AFF1;;chr1:158969752..158969780,+!p6@IFI16!0.18!1.55!IFI16;;chr19:12444440..12444455,-!p1@ZNF563!0.18!1.55!ZNF563;;chr9:16870710..16870763,-!p1@BNC2!0.18!1.55!BNC2;;chr13:37494365..37494381,-!p1@SMAD9!0.18!1.55!SMAD9;;chr19:12444519..12444537,-!p3@ZNF563!0.18!1.24!ZNF563;;chr19:57019215..57019250,+!p1@ZNF471!0.18!1.24!ZNF471;;chr8:145980968..145980996,-!p2@ZNF251!0.18!1.24!ZNF251;;chr14:75746722..75746777,+!p2@FOS!0.18!0.93!FOS;;chr16:4366005..4366016,+!p@chr16:4366005..4366016,+!0.18!0.93!GLIS2;;chr18:3450334..3450341,+!p15@TGIF1!0.18!0.93!TGIF1;;chr19:13106383..13106423,+!p8@NFIX!0.18!0.93!NFIX;;chr19:18391615..18391637,-!p5@JUND!0.18!0.93!JUND;;chr19:52531585..52531596,-!p2@ZNF614!0.18!0.93!ZNF614;;chr1:211432872..211432883,+!p7@RCOR3!0.18!0.93!RCOR3;;chr3:12329320..12329338,+!p4@PPARG!0.18!0.62!PPARG;;chr17:41623667..41623682,-!p8@ETV4!0.18!0.62!ETV4;;chr6:34204642..34204664,+!p2@HMGA1!0.17!179.92!HMGA1;;chr13:27998720..27998826,+!p1@GTF3A!0.17!125.63!GTF3A;;chr19:1652575..1652621,-!p1@TCF3!0.17!51.18!TCF3;;chrX:47509928..47509990,-!p1@ELK1!0.17!40.95!ELK1;;chr17:38804061..38804112,-!p1@SMARCE1!0.17!35.05!SMARCE1;;chr19:39390587..39390646,+!p1@NFKBIB!0.17!20.78!NFKBIB;;chr19:57999101..57999158,+!p1@ZNF419!0.17!8.38!ZNF419;;chr19:53898380..53898422,+!p1@ZNF765!0.17!7.44!ZNF765;;chr13:41635512..41635539,-!p2@ELF1!0.17!6.82!ELF1;;chr2:85360499..85360598,+!p1@TCF7L1!0.17!6.82!TCF7L1;;chr19:53073532..53073551,+!p1@ZNF701!0.17!5.27!ZNF701;;chr6:20403916..20403965,+!p3@E2F3!0.17!5.27!E2F3;;chr13:74708504..74708549,-!p1@KLF12!0.17!5.27!KLF12;;chr19:1652555..1652568,-!p2@TCF3!0.17!4.65!TCF3;;chr19:37407212..37407280,+!p1@ZNF568!0.17!4.65!ZNF568;;chr19:18392250..18392260,-!p4@JUND!0.17!3.41!JUND;;chr6:12008986..12009016,+!p3@HIVEP1!0.17!3.41!HIVEP1;;chr16:1429627..1429662,-!p2@UNKL!0.17!3.10!UNKL;;chr17:41322281..41322328,-!p2@BRCA1!0.17!3.10!BRCA1;;chr18:45457478..45457517,-!p6@SMAD2!0.17!3.10!SMAD2;;chr19:37178482..37178520,+!p1@ZNF567!0.17!2.79!ZNF567;;chr16:67596384..67596411,+!p3@CTCF!0.17!2.48!CTCF;;chr18:51750928..51750942,-!p4@MBD2!0.17!2.48!MBD2;;chr19:58071166..58071189,-!p2@ZNF550!0.17!2.48!ZNF550;;chr4:146402843..146402864,+!p3@SMAD1!0.17!1.86!SMAD1;;chr1:16302608..16302621,-!p2@ZBTB17!0.17!1.55!ZBTB17;;chr1:6845489..6845494,+!p4@CAMTA1!0.17!1.55!CAMTA1;;chr8:123793988..123794016,+!p1@ZHX2!0.17!1.55!ZHX2;;chr14:103059006..103059017,+!p2@RCOR1!0.17!1.24!RCOR1;;chr5:178287112..178287133,+!p4@ZNF354B!0.17!0.93!ZNF354B;;chr9:110251836..110251887,-!p4@KLF4!0.17!0.93!KLF4;;chr16:30569801..30569845,-!p4@ZNF764!0.17!0.93!ZNF764;;
|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134,CL:0000223,UBERON:0002532,UBERON:0006603,UBERON:0005795,UBERON:0010316
|sample_tissue=bone marrow
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.74
|rna_od260/280=2.1
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=5.4803
|rna_concentration=0.15658
|sample_note=
|profile_hcage=CNhs13508,LSID1025,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000066,CL:0000134,CL:0000144,CL:0000219,CL:0000220,CL:0000223,CL:0000255,CL:0000499,CL:0000548,CL:0000723,CL:0002076,CL:0002149,CL:0002255,CL:0002320,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000474,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000995,UBERON:0001062,UBERON:0002050,UBERON:0002384,UBERON:0002532,UBERON:0003100,UBERON:0003133,UBERON:0003134,UBERON:0003975,UBERON:0004120,UBERON:0004175,UBERON:0005156,UBERON:0005423,UBERON:0005795
|ancestors_in_disease_facet=DOID:0050686,DOID:0050687,DOID:120,DOID:14566,DOID:162,DOID:193,DOID:299,DOID:3001,DOID:305,DOID:4
|sample_description=
|fonse_cell_line=FF:0101120,FF:0101555
|fonse_cell_line=FF:0101120,FF:0101555
|fonse_cell_line_closure=FF:0101120,FF:0101555
|fonse_cell_line_closure=FF:0101120,FF:0101555
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
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|rna_box=124
|rna_catalog_number=
|rna_concentration=0.15658
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=1.74
|rna_od260/280=2.1
|rna_position=H7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=124H7
|rna_weight_ug=5.4803
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=SKOV-3-R-CC
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.23769832981676e-240!GO:0005737;cytoplasm;3.58058796877246e-193!GO:0043231;intracellular membrane-bound organelle;1.3146950129408e-186!GO:0043227;membrane-bound organelle;1.53070670285736e-186!GO:0043226;organelle;5.76589739504115e-185!GO:0043229;intracellular organelle;3.32713764630563e-184!GO:0044444;cytoplasmic part;1.48030420226575e-136!GO:0044422;organelle part;1.94993737542502e-133!GO:0044446;intracellular organelle part;8.22669123477383e-132!GO:0032991;macromolecular complex;2.26315882644784e-94!GO:0044237;cellular metabolic process;6.16646727881649e-85!GO:0030529;ribonucleoprotein complex;1.22462549338649e-84!GO:0044238;primary metabolic process;4.27869540575348e-83!GO:0043170;macromolecule metabolic process;6.99060046350177e-79!GO:0005515;protein binding;3.12797209980435e-74!GO:0005634;nucleus;8.95246290137265e-70!GO:0044428;nuclear part;2.30009692586368e-66!GO:0043233;organelle lumen;2.96934074454822e-66!GO:0031974;membrane-enclosed lumen;2.96934074454822e-66!GO:0005739;mitochondrion;9.55283960811152e-65!GO:0003723;RNA binding;8.46677583387667e-63!GO:0031090;organelle membrane;3.52868989107734e-53!GO:0005840;ribosome;2.89801893424281e-52!GO:0006412;translation;2.03062862936935e-49!GO:0019538;protein metabolic process;3.54178492368332e-49!GO:0016043;cellular component organization and biogenesis;1.06907223209664e-47!GO:0043234;protein complex;1.26302733799582e-46!GO:0003735;structural constituent of ribosome;1.88654587716184e-45!GO:0043283;biopolymer metabolic process;2.07264692803074e-45!GO:0033036;macromolecule localization;1.25393625264703e-44!GO:0015031;protein transport;2.10173975059319e-44!GO:0044260;cellular macromolecule metabolic process;3.94118750745506e-44!GO:0006396;RNA processing;4.2497287685799e-44!GO:0044267;cellular protein metabolic process;1.86989692765141e-43!GO:0044429;mitochondrial part;2.8241202972547e-41!GO:0045184;establishment of protein localization;4.23489172438046e-41!GO:0008104;protein localization;4.70062675551081e-41!GO:0010467;gene expression;5.782669087056e-41!GO:0031981;nuclear lumen;1.06712186238671e-40!GO:0009058;biosynthetic process;1.14798204427194e-40!GO:0005829;cytosol;2.12869512116468e-40!GO:0044249;cellular biosynthetic process;1.30960174587586e-39!GO:0031967;organelle envelope;1.07046434740756e-38!GO:0031975;envelope;1.13525020817288e-38!GO:0033279;ribosomal subunit;1.33696378953544e-38!GO:0009059;macromolecule biosynthetic process;9.34027172188555e-38!GO:0016071;mRNA metabolic process;8.69136212711002e-36!GO:0008380;RNA splicing;4.5358882908667e-35!GO:0046907;intracellular transport;4.86087187745769e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.04068431970821e-34!GO:0006397;mRNA processing;3.61369738919348e-31!GO:0006996;organelle organization and biogenesis;4.93778015168242e-30!GO:0065003;macromolecular complex assembly;2.55241349182829e-29!GO:0006886;intracellular protein transport;8.25450113275139e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.7972927214998e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.4345097785351e-27!GO:0005740;mitochondrial envelope;1.43259872904449e-26!GO:0022607;cellular component assembly;1.90499443525826e-26!GO:0043228;non-membrane-bound organelle;3.4206226451331e-26!GO:0043232;intracellular non-membrane-bound organelle;3.4206226451331e-26!GO:0019866;organelle inner membrane;1.30704301867763e-25!GO:0031966;mitochondrial membrane;2.46877900014374e-25!GO:0005681;spliceosome;8.65041885037519e-25!GO:0005654;nucleoplasm;1.49798136429372e-24!GO:0012505;endomembrane system;1.95216154948406e-23!GO:0005743;mitochondrial inner membrane;4.54818571377021e-23!GO:0051641;cellular localization;6.69212024952757e-23!GO:0051649;establishment of cellular localization;1.08039074743325e-22!GO:0044445;cytosolic part;1.1780230104112e-21!GO:0005783;endoplasmic reticulum;3.15344578832959e-21!GO:0006119;oxidative phosphorylation;3.16732253139547e-21!GO:0015934;large ribosomal subunit;1.30170839352041e-20!GO:0044451;nucleoplasm part;1.43199592101414e-20!GO:0003676;nucleic acid binding;3.82083240892125e-20!GO:0016462;pyrophosphatase activity;4.34880107055414e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.61152418391632e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;8.82391877178154e-20!GO:0006457;protein folding;2.5172347170874e-19!GO:0000166;nucleotide binding;2.71160602842285e-19!GO:0017111;nucleoside-triphosphatase activity;3.80052818232743e-19!GO:0015935;small ribosomal subunit;5.7374196247981e-19!GO:0006259;DNA metabolic process;1.09980265871405e-18!GO:0044455;mitochondrial membrane part;1.65392548030805e-18!GO:0016070;RNA metabolic process;1.79319375640952e-18!GO:0022618;protein-RNA complex assembly;2.26466834977213e-18!GO:0048770;pigment granule;5.52002709843798e-18!GO:0042470;melanosome;5.52002709843798e-18!GO:0031980;mitochondrial lumen;1.31325548344898e-17!GO:0005759;mitochondrial matrix;1.31325548344898e-17!GO:0044265;cellular macromolecule catabolic process;2.04749051498926e-17!GO:0043285;biopolymer catabolic process;2.09661135359099e-17!GO:0008134;transcription factor binding;4.03845624820595e-17!GO:0000502;proteasome complex (sensu Eukaryota);4.43490474112552e-17!GO:0044432;endoplasmic reticulum part;4.50049694470211e-17!GO:0016874;ligase activity;5.87398709231413e-17!GO:0005730;nucleolus;6.11933998405057e-17!GO:0009057;macromolecule catabolic process;8.12416381835893e-17!GO:0006512;ubiquitin cycle;9.41208916223196e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.5957461625784e-16!GO:0051186;cofactor metabolic process;7.85434091044057e-16!GO:0005794;Golgi apparatus;1.87326885901525e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.78420593922696e-15!GO:0003954;NADH dehydrogenase activity;2.78420593922696e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.78420593922696e-15!GO:0030163;protein catabolic process;3.38261839482911e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;3.77324164508085e-15!GO:0005746;mitochondrial respiratory chain;4.53057575043113e-15!GO:0005761;mitochondrial ribosome;5.29968309294164e-15!GO:0000313;organellar ribosome;5.29968309294164e-15!GO:0019941;modification-dependent protein catabolic process;7.88478285958124e-15!GO:0043632;modification-dependent macromolecule catabolic process;7.88478285958124e-15!GO:0044257;cellular protein catabolic process;8.54986984468639e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.01694088615247e-14!GO:0016192;vesicle-mediated transport;1.08653047178601e-14!GO:0006605;protein targeting;1.41961276945314e-14!GO:0008135;translation factor activity, nucleic acid binding;1.74624996055621e-14!GO:0007049;cell cycle;2.57896945727857e-14!GO:0051082;unfolded protein binding;2.58791042582284e-14!GO:0032553;ribonucleotide binding;3.35670197791305e-14!GO:0032555;purine ribonucleotide binding;3.35670197791305e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.70385213170771e-14!GO:0043412;biopolymer modification;4.69344796466898e-14!GO:0012501;programmed cell death;8.50980528779328e-14!GO:0048193;Golgi vesicle transport;9.75149369700173e-14!GO:0017076;purine nucleotide binding;1.106724221395e-13!GO:0044248;cellular catabolic process;1.36124953588107e-13!GO:0006915;apoptosis;1.39911168160596e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.75876858014495e-13!GO:0045271;respiratory chain complex I;2.75876858014495e-13!GO:0005747;mitochondrial respiratory chain complex I;2.75876858014495e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.49579507118007e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.5338686408897e-13!GO:0005635;nuclear envelope;4.29353571028326e-13!GO:0005789;endoplasmic reticulum membrane;7.77207615323502e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.24565671097352e-13!GO:0031965;nuclear membrane;1.09482008082776e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.1888249403808e-12!GO:0000375;RNA splicing, via transesterification reactions;1.1888249403808e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.1888249403808e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.4741291371622e-12!GO:0006464;protein modification process;1.91724752714963e-12!GO:0006732;coenzyme metabolic process;2.03250217360193e-12!GO:0008219;cell death;2.59410244001491e-12!GO:0016265;death;2.59410244001491e-12!GO:0006413;translational initiation;2.6906159145513e-12!GO:0042775;organelle ATP synthesis coupled electron transport;7.76331627789669e-12!GO:0042773;ATP synthesis coupled electron transport;7.76331627789669e-12!GO:0003743;translation initiation factor activity;9.20638696080267e-12!GO:0005768;endosome;1.57513844845644e-11!GO:0003712;transcription cofactor activity;2.23241445080398e-11!GO:0044453;nuclear membrane part;3.75397311967666e-11!GO:0009055;electron carrier activity;5.83899032041551e-11!GO:0006446;regulation of translational initiation;6.64417934513606e-11!GO:0042254;ribosome biogenesis and assembly;8.51177882289508e-11!GO:0006366;transcription from RNA polymerase II promoter;2.00703609017616e-10!GO:0043687;post-translational protein modification;2.27076651894099e-10!GO:0005524;ATP binding;2.63470578267607e-10!GO:0043069;negative regulation of programmed cell death;2.70266889007003e-10!GO:0005793;ER-Golgi intermediate compartment;2.82182065297187e-10!GO:0032559;adenyl ribonucleotide binding;3.68356304402986e-10!GO:0006913;nucleocytoplasmic transport;3.80337559614866e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;3.85962178546219e-10!GO:0008639;small protein conjugating enzyme activity;4.18257092636367e-10!GO:0022402;cell cycle process;5.65630017520992e-10!GO:0004842;ubiquitin-protein ligase activity;7.90068107001633e-10!GO:0051169;nuclear transport;8.30175938901218e-10!GO:0043066;negative regulation of apoptosis;8.38477539279455e-10!GO:0019787;small conjugating protein ligase activity;8.73733895413082e-10!GO:0048523;negative regulation of cellular process;8.9818772656557e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.2385014255104e-10!GO:0003924;GTPase activity;9.8785083072114e-10!GO:0016604;nuclear body;1.14386259172376e-09!GO:0030554;adenyl nucleotide binding;1.27910393660481e-09!GO:0006323;DNA packaging;1.41035338344765e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.79118093733312e-09!GO:0006974;response to DNA damage stimulus;1.84559366707548e-09!GO:0050794;regulation of cellular process;2.04920161067745e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.21441096818762e-09!GO:0051276;chromosome organization and biogenesis;2.23786591069207e-09!GO:0006916;anti-apoptosis;2.53493829513793e-09!GO:0043067;regulation of programmed cell death;3.13060817815833e-09!GO:0042981;regulation of apoptosis;3.58151170942369e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.67045641701762e-09!GO:0016887;ATPase activity;3.84585815759298e-09!GO:0009259;ribonucleotide metabolic process;3.89803975151165e-09!GO:0051188;cofactor biosynthetic process;4.15658153542032e-09!GO:0042623;ATPase activity, coupled;4.78706301621766e-09!GO:0006399;tRNA metabolic process;5.02511311212314e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.49840231349822e-09!GO:0016881;acid-amino acid ligase activity;8.29476032478637e-09!GO:0006163;purine nucleotide metabolic process;1.02201176240083e-08!GO:0008565;protein transporter activity;1.04065664015288e-08!GO:0015986;ATP synthesis coupled proton transport;1.09975936902191e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.09975936902191e-08!GO:0000278;mitotic cell cycle;1.32552153125103e-08!GO:0009056;catabolic process;1.40921060814995e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.91198030068498e-08!GO:0006164;purine nucleotide biosynthetic process;1.91198030068498e-08!GO:0009150;purine ribonucleotide metabolic process;1.91198030068498e-08!GO:0005643;nuclear pore;2.03676389511169e-08!GO:0009260;ribonucleotide biosynthetic process;2.23515354943658e-08!GO:0017038;protein import;3.04436796660468e-08!GO:0007005;mitochondrion organization and biogenesis;3.25437300813585e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.42807749441066e-08!GO:0048519;negative regulation of biological process;3.42807749441066e-08!GO:0032446;protein modification by small protein conjugation;4.53423303837618e-08!GO:0019829;cation-transporting ATPase activity;4.59874424501051e-08!GO:0030532;small nuclear ribonucleoprotein complex;4.67888572899588e-08!GO:0065004;protein-DNA complex assembly;5.03187312401838e-08!GO:0006403;RNA localization;5.1703697549835e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.45932830115108e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.45932830115108e-08!GO:0005694;chromosome;5.56466428480647e-08!GO:0009199;ribonucleoside triphosphate metabolic process;6.46651631553653e-08!GO:0016567;protein ubiquitination;6.85759362154182e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.57532334475454e-08!GO:0016607;nuclear speck;7.64787110012795e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.02136292872586e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.02136292872586e-08!GO:0009141;nucleoside triphosphate metabolic process;8.10403363606729e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.41099972378311e-08!GO:0009144;purine nucleoside triphosphate metabolic process;9.41099972378311e-08!GO:0050657;nucleic acid transport;9.73867313108717e-08!GO:0051236;establishment of RNA localization;9.73867313108717e-08!GO:0050658;RNA transport;9.73867313108717e-08!GO:0065002;intracellular protein transport across a membrane;1.07235286958889e-07!GO:0006461;protein complex assembly;1.11899412130277e-07!GO:0015630;microtubule cytoskeleton;1.91342349541562e-07!GO:0044427;chromosomal part;2.01747311001266e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.01747311001266e-07!GO:0009108;coenzyme biosynthetic process;2.16938389780367e-07!GO:0006754;ATP biosynthetic process;2.24384245139723e-07!GO:0006753;nucleoside phosphate metabolic process;2.24384245139723e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.59007924067737e-07!GO:0006281;DNA repair;2.95782884743176e-07!GO:0051246;regulation of protein metabolic process;3.05992370145167e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.49877259286741e-07!GO:0004812;aminoacyl-tRNA ligase activity;3.49877259286741e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.49877259286741e-07!GO:0006333;chromatin assembly or disassembly;3.49877259286741e-07!GO:0046034;ATP metabolic process;3.71405186471147e-07!GO:0051726;regulation of cell cycle;4.40265182235177e-07!GO:0000074;regulation of progression through cell cycle;5.23994974218418e-07!GO:0000785;chromatin;5.36548809456412e-07!GO:0006364;rRNA processing;5.73716119358572e-07!GO:0016072;rRNA metabolic process;5.74042881824931e-07!GO:0016564;transcription repressor activity;5.76555785178104e-07!GO:0044440;endosomal part;5.97242464912861e-07!GO:0010008;endosome membrane;5.97242464912861e-07!GO:0044431;Golgi apparatus part;6.42376567240723e-07!GO:0043038;amino acid activation;6.78798573544072e-07!GO:0006418;tRNA aminoacylation for protein translation;6.78798573544072e-07!GO:0043039;tRNA aminoacylation;6.78798573544072e-07!GO:0016563;transcription activator activity;7.36051162267458e-07!GO:0005525;GTP binding;8.85055038195251e-07!GO:0004386;helicase activity;9.95362014561593e-07!GO:0005667;transcription factor complex;1.06754450440345e-06!GO:0009117;nucleotide metabolic process;1.08930852735663e-06!GO:0004298;threonine endopeptidase activity;1.17416391115361e-06!GO:0031324;negative regulation of cellular metabolic process;1.20141031193161e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.20347316720819e-06!GO:0046930;pore complex;1.20724650783729e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.368094710093e-06!GO:0006752;group transfer coenzyme metabolic process;1.64754532585256e-06!GO:0008654;phospholipid biosynthetic process;1.79860596205339e-06!GO:0048475;coated membrane;1.82343422332636e-06!GO:0030117;membrane coat;1.82343422332636e-06!GO:0003714;transcription corepressor activity;1.83756260256872e-06!GO:0005773;vacuole;2.1101355825719e-06!GO:0008026;ATP-dependent helicase activity;2.14857610914531e-06!GO:0030120;vesicle coat;2.21865221492648e-06!GO:0030662;coated vesicle membrane;2.21865221492648e-06!GO:0009060;aerobic respiration;2.34527748801316e-06!GO:0009719;response to endogenous stimulus;2.43364511934347e-06!GO:0031988;membrane-bound vesicle;2.68578181227428e-06!GO:0050789;regulation of biological process;2.93877521139627e-06!GO:0016023;cytoplasmic membrane-bound vesicle;3.24281353476137e-06!GO:0006334;nucleosome assembly;3.52399474177085e-06!GO:0031497;chromatin assembly;3.63944877694946e-06!GO:0051028;mRNA transport;3.69806100202679e-06!GO:0005769;early endosome;3.93634768625449e-06!GO:0045259;proton-transporting ATP synthase complex;3.99782165070239e-06!GO:0006793;phosphorus metabolic process;4.76356650424914e-06!GO:0006796;phosphate metabolic process;4.76356650424914e-06!GO:0016568;chromatin modification;4.85729775281829e-06!GO:0016740;transferase activity;4.9943356865975e-06!GO:0005762;mitochondrial large ribosomal subunit;5.05796758502911e-06!GO:0000315;organellar large ribosomal subunit;5.05796758502911e-06!GO:0006099;tricarboxylic acid cycle;5.65930421903661e-06!GO:0046356;acetyl-CoA catabolic process;5.65930421903661e-06!GO:0000245;spliceosome assembly;5.79719158127422e-06!GO:0051301;cell division;5.81289776691125e-06!GO:0000087;M phase of mitotic cell cycle;5.81289776691125e-06!GO:0005770;late endosome;5.85906445355107e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.91727707307368e-06!GO:0007243;protein kinase cascade;6.13794296326403e-06!GO:0007067;mitosis;6.94285372198774e-06!GO:0006260;DNA replication;7.01389832149124e-06!GO:0016491;oxidoreductase activity;7.16605861894626e-06!GO:0051170;nuclear import;7.40661680533232e-06!GO:0051427;hormone receptor binding;8.88345359087332e-06!GO:0003713;transcription coactivator activity;9.78104166594755e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.07042120006497e-05!GO:0005788;endoplasmic reticulum lumen;1.10793518404596e-05!GO:0051187;cofactor catabolic process;1.14313695137467e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.16483535875521e-05!GO:0032561;guanyl ribonucleotide binding;1.32762345346093e-05!GO:0019001;guanyl nucleotide binding;1.32762345346093e-05!GO:0045333;cellular respiration;1.47943123192625e-05!GO:0006084;acetyl-CoA metabolic process;1.59558165359218e-05!GO:0016787;hydrolase activity;1.59941204672879e-05!GO:0009892;negative regulation of metabolic process;1.66161949024835e-05!GO:0006606;protein import into nucleus;1.69225418573498e-05!GO:0000151;ubiquitin ligase complex;2.00056439329253e-05!GO:0035257;nuclear hormone receptor binding;2.04398521445675e-05!GO:0000323;lytic vacuole;2.15582001148946e-05!GO:0005764;lysosome;2.15582001148946e-05!GO:0016481;negative regulation of transcription;2.713679719486e-05!GO:0022403;cell cycle phase;2.9547170814939e-05!GO:0006613;cotranslational protein targeting to membrane;2.96565767341269e-05!GO:0005813;centrosome;3.17601283193881e-05!GO:0000139;Golgi membrane;3.29163664422472e-05!GO:0045454;cell redox homeostasis;3.78952107371994e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.13050438397049e-05!GO:0016310;phosphorylation;4.66863582555376e-05!GO:0006091;generation of precursor metabolites and energy;4.69513724116557e-05!GO:0009109;coenzyme catabolic process;5.3985559065815e-05!GO:0043623;cellular protein complex assembly;5.59636593015773e-05!GO:0043021;ribonucleoprotein binding;5.80326660825646e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.05570863374714e-05!GO:0031982;vesicle;6.05570863374714e-05!GO:0003724;RNA helicase activity;6.43993321739697e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.99021545590546e-05!GO:0030867;rough endoplasmic reticulum membrane;7.61740325118762e-05!GO:0016044;membrane organization and biogenesis;7.85458900746409e-05!GO:0005815;microtubule organizing center;7.96783516460703e-05!GO:0019222;regulation of metabolic process;8.19100456562945e-05!GO:0048471;perinuclear region of cytoplasm;9.05257336928244e-05!GO:0019899;enzyme binding;9.21661130713708e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.21661130713708e-05!GO:0031410;cytoplasmic vesicle;0.000104901589462768!GO:0000314;organellar small ribosomal subunit;0.0001056617689705!GO:0005763;mitochondrial small ribosomal subunit;0.0001056617689705!GO:0005798;Golgi-associated vesicle;0.000107417347535491!GO:0043566;structure-specific DNA binding;0.00010911529702805!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000113855647322582!GO:0044262;cellular carbohydrate metabolic process;0.000139496689240446!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000161691126115708!GO:0015399;primary active transmembrane transporter activity;0.000161691126115708!GO:0007264;small GTPase mediated signal transduction;0.000164346052363433!GO:0033116;ER-Golgi intermediate compartment membrane;0.000172690730373548!GO:0016779;nucleotidyltransferase activity;0.000176017220021138!GO:0048522;positive regulation of cellular process;0.000184810127557013!GO:0051789;response to protein stimulus;0.000206442686414653!GO:0006986;response to unfolded protein;0.000206442686414653!GO:0005791;rough endoplasmic reticulum;0.000208822857184133!GO:0005905;coated pit;0.000220214674274285!GO:0003899;DNA-directed RNA polymerase activity;0.000244055225718562!GO:0006612;protein targeting to membrane;0.000295400938216117!GO:0005048;signal sequence binding;0.000296804138054622!GO:0008361;regulation of cell size;0.000298750298303817!GO:0008250;oligosaccharyl transferase complex;0.000321740076481582!GO:0046474;glycerophospholipid biosynthetic process;0.000358777522112283!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000381450244492839!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000402185175871222!GO:0016049;cell growth;0.000417804426297068!GO:0045786;negative regulation of progression through cell cycle;0.000424962130864781!GO:0016197;endosome transport;0.00043673019293366!GO:0003697;single-stranded DNA binding;0.000456822937410214!GO:0004576;oligosaccharyl transferase activity;0.000462747376136401!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000470688944001982!GO:0051168;nuclear export;0.000476542224043593!GO:0031252;leading edge;0.000512960512650268!GO:0005885;Arp2/3 protein complex;0.000532704421195827!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000549069283499846!GO:0008186;RNA-dependent ATPase activity;0.000629426524697476!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000645019850542859!GO:0046489;phosphoinositide biosynthetic process;0.000646461823039291!GO:0030521;androgen receptor signaling pathway;0.000653626801982164!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000670148299994801!GO:0065009;regulation of a molecular function;0.000671467958318301!GO:0046467;membrane lipid biosynthetic process;0.000685674823488944!GO:0051920;peroxiredoxin activity;0.000691545368849404!GO:0031968;organelle outer membrane;0.000705169165061979!GO:0000279;M phase;0.000715471030607322!GO:0016853;isomerase activity;0.000736742615811389!GO:0015980;energy derivation by oxidation of organic compounds;0.000751878575089534!GO:0009967;positive regulation of signal transduction;0.00076110200583383!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000775806511485071!GO:0003729;mRNA binding;0.000776319751801011!GO:0019843;rRNA binding;0.000776512607344922!GO:0005874;microtubule;0.000805172134669971!GO:0043681;protein import into mitochondrion;0.000821569542687079!GO:0009165;nucleotide biosynthetic process;0.000832988097524289!GO:0007010;cytoskeleton organization and biogenesis;0.000914561619316288!GO:0006891;intra-Golgi vesicle-mediated transport;0.000931680280733463!GO:0048468;cell development;0.000987690226034204!GO:0019867;outer membrane;0.00100399065761372!GO:0006839;mitochondrial transport;0.00101409345394289!GO:0000786;nucleosome;0.00109413559113746!GO:0005637;nuclear inner membrane;0.0011265180687253!GO:0031072;heat shock protein binding;0.0012016309201794!GO:0008610;lipid biosynthetic process;0.00123478558428566!GO:0006383;transcription from RNA polymerase III promoter;0.00126365251186257!GO:0015631;tubulin binding;0.00128273816786251!GO:0006401;RNA catabolic process;0.00132935576083917!GO:0018196;peptidyl-asparagine modification;0.00133352539303874!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00133352539303874!GO:0006626;protein targeting to mitochondrion;0.0013761140191513!GO:0006414;translational elongation;0.00139137336188329!GO:0065007;biological regulation;0.0014303491905333!GO:0006650;glycerophospholipid metabolic process;0.00159179611591271!GO:0001558;regulation of cell growth;0.00163144316208298!GO:0046483;heterocycle metabolic process;0.00163605739405294!GO:0004004;ATP-dependent RNA helicase activity;0.00170751194326258!GO:0051087;chaperone binding;0.00170816107430548!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00172427880661851!GO:0006402;mRNA catabolic process;0.00178261954350453!GO:0005741;mitochondrial outer membrane;0.00178261954350453!GO:0008033;tRNA processing;0.00189076186503217!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00192869173624695!GO:0005819;spindle;0.00206361561274631!GO:0008092;cytoskeletal protein binding;0.00213621940926771!GO:0030036;actin cytoskeleton organization and biogenesis;0.00216961686746439!GO:0043488;regulation of mRNA stability;0.00228265530890916!GO:0043487;regulation of RNA stability;0.00228265530890916!GO:0042802;identical protein binding;0.00240670683625059!GO:0035258;steroid hormone receptor binding;0.00251083469562713!GO:0043492;ATPase activity, coupled to movement of substances;0.00268156189122221!GO:0016859;cis-trans isomerase activity;0.00287810076313531!GO:0030176;integral to endoplasmic reticulum membrane;0.00295066744604151!GO:0031901;early endosome membrane;0.00299514147974812!GO:0031902;late endosome membrane;0.00310887106256443!GO:0030880;RNA polymerase complex;0.00323559675416045!GO:0030659;cytoplasmic vesicle membrane;0.00324300095949558!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00345346819747118!GO:0016272;prefoldin complex;0.00376581300659896!GO:0051540;metal cluster binding;0.00380378729351957!GO:0051536;iron-sulfur cluster binding;0.00380378729351957!GO:0006352;transcription initiation;0.00390406494857258!GO:0048487;beta-tubulin binding;0.00396700751235196!GO:0051252;regulation of RNA metabolic process;0.00402245859161345!GO:0006509;membrane protein ectodomain proteolysis;0.00402245859161345!GO:0033619;membrane protein proteolysis;0.00402245859161345!GO:0007034;vacuolar transport;0.0040726457653022!GO:0043284;biopolymer biosynthetic process;0.0041145973525074!GO:0007040;lysosome organization and biogenesis;0.0041345636912379!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00426887318155288!GO:0030133;transport vesicle;0.00452641142856843!GO:0045893;positive regulation of transcription, DNA-dependent;0.00461485340273049!GO:0030384;phosphoinositide metabolic process;0.00474939700863172!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00480936108349779!GO:0048500;signal recognition particle;0.00489851694351087!GO:0030118;clathrin coat;0.00495778298569957!GO:0030518;steroid hormone receptor signaling pathway;0.00502501679797793!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00511669114446769!GO:0045941;positive regulation of transcription;0.00516135289551203!GO:0016251;general RNA polymerase II transcription factor activity;0.00525611522078694!GO:0007033;vacuole organization and biogenesis;0.00546303090534333!GO:0030658;transport vesicle membrane;0.00554637834285373!GO:0031323;regulation of cellular metabolic process;0.00555188052688663!GO:0050681;androgen receptor binding;0.00557496407456009!GO:0044452;nucleolar part;0.00559109733198347!GO:0006897;endocytosis;0.00568085898785892!GO:0010324;membrane invagination;0.00568085898785892!GO:0006497;protein amino acid lipidation;0.0058820216246641!GO:0045892;negative regulation of transcription, DNA-dependent;0.00596585431267545!GO:0006007;glucose catabolic process;0.00609210732046291!GO:0007242;intracellular signaling cascade;0.00612622949645735!GO:0008139;nuclear localization sequence binding;0.00617684553249942!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00635085975111004!GO:0000428;DNA-directed RNA polymerase complex;0.00635085975111004!GO:0016363;nuclear matrix;0.00643086141722265!GO:0051329;interphase of mitotic cell cycle;0.00649419365670177!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00688573318404564!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00688573318404564!GO:0016126;sterol biosynthetic process;0.00703593015919973!GO:0007021;tubulin folding;0.00757471963877916!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00769175970292132!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00770817343300157!GO:0005774;vacuolar membrane;0.00770817343300157!GO:0006350;transcription;0.00787103035892918!GO:0044433;cytoplasmic vesicle part;0.00790425029335851!GO:0009112;nucleobase metabolic process;0.00806775589761868!GO:0003746;translation elongation factor activity;0.00831282788881892!GO:0006740;NADPH regeneration;0.00833599410989336!GO:0006098;pentose-phosphate shunt;0.00833599410989336!GO:0005684;U2-dependent spliceosome;0.00834877982593414!GO:0043022;ribosome binding;0.00847504169901675!GO:0046519;sphingoid metabolic process;0.00859167775886203!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00859167775886203!GO:0030132;clathrin coat of coated pit;0.00888348138889456!GO:0017166;vinculin binding;0.00889220055951447!GO:0030663;COPI coated vesicle membrane;0.00902504185522234!GO:0030126;COPI vesicle coat;0.00902504185522234!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00914107000121498!GO:0006778;porphyrin metabolic process;0.00929726276523275!GO:0033013;tetrapyrrole metabolic process;0.00929726276523275!GO:0003711;transcription elongation regulator activity;0.00934993280809386!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00934993280809386!GO:0051101;regulation of DNA binding;0.00934993280809386!GO:0030660;Golgi-associated vesicle membrane;0.00946563661611694!GO:0051287;NAD binding;0.00964711167540153!GO:0008017;microtubule binding;0.0100033201508083!GO:0008637;apoptotic mitochondrial changes;0.0102556138450172!GO:0030134;ER to Golgi transport vesicle;0.0103009682866447!GO:0045045;secretory pathway;0.0104412223237223!GO:0051325;interphase;0.0104456623084908!GO:0007006;mitochondrial membrane organization and biogenesis;0.0104909716998551!GO:0030029;actin filament-based process;0.0107838974373201!GO:0006506;GPI anchor biosynthetic process;0.0108393239363719!GO:0000059;protein import into nucleus, docking;0.0108542562433798!GO:0009116;nucleoside metabolic process;0.0108542562433798!GO:0006672;ceramide metabolic process;0.0112019346312992!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0113455167669012!GO:0045047;protein targeting to ER;0.0113455167669012!GO:0000049;tRNA binding;0.0113455167669012!GO:0012506;vesicle membrane;0.0117551691254461!GO:0030137;COPI-coated vesicle;0.011771845753449!GO:0008312;7S RNA binding;0.0118671975000988!GO:0008632;apoptotic program;0.0118671975000988!GO:0048518;positive regulation of biological process;0.0118671975000988!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0118882556041075!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0119464003490963!GO:0015002;heme-copper terminal oxidase activity;0.0119464003490963!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0119464003490963!GO:0004129;cytochrome-c oxidase activity;0.0119464003490963!GO:0005869;dynactin complex;0.012051334955322!GO:0019318;hexose metabolic process;0.012634927450302!GO:0030127;COPII vesicle coat;0.012775724979976!GO:0012507;ER to Golgi transport vesicle membrane;0.012775724979976!GO:0003690;double-stranded DNA binding;0.0129041755157364!GO:0050662;coenzyme binding;0.0130243798607085!GO:0042158;lipoprotein biosynthetic process;0.0132410540029156!GO:0007041;lysosomal transport;0.0132935787044874!GO:0003702;RNA polymerase II transcription factor activity;0.0133511760185725!GO:0005996;monosaccharide metabolic process;0.0133789790681877!GO:0051098;regulation of binding;0.0134753365962295!GO:0006643;membrane lipid metabolic process;0.0137800160669223!GO:0006405;RNA export from nucleus;0.0137800160669223!GO:0006818;hydrogen transport;0.0138783524715248!GO:0006518;peptide metabolic process;0.0139240693509584!GO:0006733;oxidoreduction coenzyme metabolic process;0.0139240693509584!GO:0015992;proton transport;0.0139240693509584!GO:0000118;histone deacetylase complex;0.0140848567600999!GO:0006767;water-soluble vitamin metabolic process;0.0144225885234984!GO:0006695;cholesterol biosynthetic process;0.0145159405384037!GO:0005832;chaperonin-containing T-complex;0.0145546457869815!GO:0006505;GPI anchor metabolic process;0.0153462958479524!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0155099420694456!GO:0030119;AP-type membrane coat adaptor complex;0.015719145337633!GO:0004177;aminopeptidase activity;0.0157824113505777!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0166065353395048!GO:0051539;4 iron, 4 sulfur cluster binding;0.0168749896299492!GO:0040008;regulation of growth;0.0171492131544345!GO:0004674;protein serine/threonine kinase activity;0.0179188818091049!GO:0044437;vacuolar part;0.0181008996030296!GO:0030032;lamellipodium biogenesis;0.0183546866144993!GO:0046966;thyroid hormone receptor binding;0.0185248520087046!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0185415647487419!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0185415647487419!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0185415647487419!GO:0031418;L-ascorbic acid binding;0.0185903113084233!GO:0035035;histone acetyltransferase binding;0.018660786524781!GO:0030503;regulation of cell redox homeostasis;0.0190630693316397!GO:0019752;carboxylic acid metabolic process;0.0193321575351107!GO:0050790;regulation of catalytic activity;0.0193536740762722!GO:0008320;protein transmembrane transporter activity;0.0195555941462018!GO:0022884;macromolecule transmembrane transporter activity;0.0201333207012314!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0201333207012314!GO:0006892;post-Golgi vesicle-mediated transport;0.020482784723724!GO:0006417;regulation of translation;0.0210872842035119!GO:0031543;peptidyl-proline dioxygenase activity;0.0212287333133047!GO:0000209;protein polyubiquitination;0.0212663239193021!GO:0007030;Golgi organization and biogenesis;0.0214192520498495!GO:0030522;intracellular receptor-mediated signaling pathway;0.0214574785530529!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0216402814124271!GO:0010257;NADH dehydrogenase complex assembly;0.0216402814124271!GO:0033108;mitochondrial respiratory chain complex assembly;0.0216402814124271!GO:0006213;pyrimidine nucleoside metabolic process;0.0218731601357975!GO:0050811;GABA receptor binding;0.0218731601357975!GO:0006595;polyamine metabolic process;0.0220370587325654!GO:0008180;signalosome;0.0220370587325654!GO:0006082;organic acid metabolic process;0.0222631964212829!GO:0003684;damaged DNA binding;0.0222631964212829!GO:0045792;negative regulation of cell size;0.023321733525279!GO:0000339;RNA cap binding;0.0236113601668243!GO:0006611;protein export from nucleus;0.0244690325209302!GO:0006261;DNA-dependent DNA replication;0.0248461259545574!GO:0008383;manganese superoxide dismutase activity;0.0250751624288678!GO:0001315;age-dependent response to reactive oxygen species;0.0250751624288678!GO:0010468;regulation of gene expression;0.0251525472784423!GO:0001666;response to hypoxia;0.02558462788928!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0257052803679012!GO:0033559;unsaturated fatty acid metabolic process;0.0259054378316602!GO:0006636;unsaturated fatty acid biosynthetic process;0.0259054378316602!GO:0006338;chromatin remodeling;0.0259759748354277!GO:0022890;inorganic cation transmembrane transporter activity;0.026072470361226!GO:0031124;mRNA 3'-end processing;0.0263483757954982!GO:0008287;protein serine/threonine phosphatase complex;0.0263483757954982!GO:0050178;phenylpyruvate tautomerase activity;0.0269482770623042!GO:0006739;NADP metabolic process;0.026997110832186!GO:0005765;lysosomal membrane;0.0275032783401504!GO:0008022;protein C-terminus binding;0.0276094644407123!GO:0030308;negative regulation of cell growth;0.0279754325792731!GO:0016791;phosphoric monoester hydrolase activity;0.0280282234903269!GO:0005862;muscle thin filament tropomyosin;0.0282263436217949!GO:0042168;heme metabolic process;0.0282263436217949!GO:0003756;protein disulfide isomerase activity;0.0285661119420851!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0285661119420851!GO:0006769;nicotinamide metabolic process;0.0286193621047483!GO:0032508;DNA duplex unwinding;0.0297738833514246!GO:0032392;DNA geometric change;0.0297738833514246!GO:0043433;negative regulation of transcription factor activity;0.030230139382977!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.030230139382977!GO:0030131;clathrin adaptor complex;0.0306745015374426!GO:0043065;positive regulation of apoptosis;0.0307104818762886!GO:0009966;regulation of signal transduction;0.0311055518279765!GO:0016301;kinase activity;0.0311796853735311!GO:0043189;H4/H2A histone acetyltransferase complex;0.0316999363248118!GO:0007051;spindle organization and biogenesis;0.0321284436717375!GO:0008234;cysteine-type peptidase activity;0.0321637824868868!GO:0006376;mRNA splice site selection;0.0322554040842308!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0322554040842308!GO:0046983;protein dimerization activity;0.0323992698156416!GO:0030125;clathrin vesicle coat;0.0324125315915975!GO:0030665;clathrin coated vesicle membrane;0.0324125315915975!GO:0030100;regulation of endocytosis;0.0333458737226207!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0336842771554058!GO:0006354;RNA elongation;0.0339919407461888!GO:0006644;phospholipid metabolic process;0.0349764652126822!GO:0043068;positive regulation of programmed cell death;0.0353814842095471!GO:0003678;DNA helicase activity;0.035396380826198!GO:0031625;ubiquitin protein ligase binding;0.0356702689074857!GO:0000792;heterochromatin;0.0356702689074857!GO:0006096;glycolysis;0.0356702689074857!GO:0031371;ubiquitin conjugating enzyme complex;0.0356702689074857!GO:0001836;release of cytochrome c from mitochondria;0.035681429985547!GO:0030984;kininogen binding;0.0360602519860222!GO:0004213;cathepsin B activity;0.0360602519860222!GO:0006144;purine base metabolic process;0.0363765599237653!GO:0006779;porphyrin biosynthetic process;0.0366269814790164!GO:0033014;tetrapyrrole biosynthetic process;0.0366269814790164!GO:0009119;ribonucleoside metabolic process;0.037354883648358!GO:0008601;protein phosphatase type 2A regulator activity;0.0375115530487828!GO:0046426;negative regulation of JAK-STAT cascade;0.038535640831175!GO:0043154;negative regulation of caspase activity;0.0386246205619936!GO:0006914;autophagy;0.0386246205619936!GO:0000776;kinetochore;0.0387690306175833!GO:0000030;mannosyltransferase activity;0.0387690306175833!GO:0030041;actin filament polymerization;0.0389426486226468!GO:0030433;ER-associated protein catabolic process;0.0389499696216016!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0389499696216016!GO:0032774;RNA biosynthetic process;0.0396829576966042!GO:0004860;protein kinase inhibitor activity;0.0397215115997777!GO:0000123;histone acetyltransferase complex;0.0400184744022364!GO:0006351;transcription, DNA-dependent;0.0404788911301267!GO:0019798;procollagen-proline dioxygenase activity;0.0406728016302255!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0410730779211294!GO:0016408;C-acyltransferase activity;0.0413445586730456!GO:0008629;induction of apoptosis by intracellular signals;0.0420137552942067!GO:0032940;secretion by cell;0.0420137552942067!GO:0043624;cellular protein complex disassembly;0.0420568402450151!GO:0033673;negative regulation of kinase activity;0.0424983853193809!GO:0006469;negative regulation of protein kinase activity;0.0424983853193809!GO:0046365;monosaccharide catabolic process;0.0428238768263793!GO:0008047;enzyme activator activity;0.0429027118508753!GO:0009889;regulation of biosynthetic process;0.0429027118508753!GO:0016407;acetyltransferase activity;0.0429027118508753!GO:0005784;translocon complex;0.0431484660000338!GO:0030911;TPR domain binding;0.0432505310253133!GO:0008538;proteasome activator activity;0.0432505310253133!GO:0031326;regulation of cellular biosynthetic process;0.0434941596983383!GO:0030508;thiol-disulfide exchange intermediate activity;0.0435234669999737!GO:0032984;macromolecular complex disassembly;0.0435234669999737!GO:0031529;ruffle organization and biogenesis;0.0438771577613584!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0441258577871854!GO:0040029;regulation of gene expression, epigenetic;0.0447951141819915!GO:0051338;regulation of transferase activity;0.046016364749562!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0460196907182885!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0461054661825264!GO:0016311;dephosphorylation;0.0469408857056576!GO:0006378;mRNA polyadenylation;0.0471117503800451!GO:0005669;transcription factor TFIID complex;0.0472442395831727!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0473671127549215!GO:0035267;NuA4 histone acetyltransferase complex;0.0479895713620446!GO:0016584;nucleosome positioning;0.048518729662524!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0489204489955016!GO:0005657;replication fork;0.0491586197519957!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0492018936756097!GO:0009303;rRNA transcription;0.0496566456404679
|sample_id=11843
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone marrow
|top_motifs=ALX1:1.18541040599;ONECUT1,2:1.16454582963;HIF1A:1.09156216267;RXRA_VDR{dimer}:1.04862264837;NKX3-1:0.895498827804;FOXQ1:0.864104485913;XCPE1{core}:0.765498292955;PPARG:0.759260870415;PAX8:0.752929307455;HOXA9_MEIS1:0.751388583089;LHX3,4:0.728170423307;POU3F1..4:0.713078404913;BACH2:0.669317249003;ZBTB16:0.628453780359;SP1:0.503017819893;STAT5{A,B}:0.495639283673;NFE2L2:0.489358838305;FOSL2:0.471612647654;UFEwm:0.470638322268;PAX4:0.414551761945;ATF6:0.410703614049;FOS_FOS{B,L1}_JUN{B,D}:0.398720416972;ZNF148:0.379571569828;RFX1:0.376921036742;TBP:0.349250278154;PBX1:0.342908245363;NR6A1:0.339633249353;NFKB1_REL_RELA:0.334542027543;POU1F1:0.308616745625;HNF1A:0.306261326696;NFE2:0.298566093218;ZNF423:0.285866434892;SMAD1..7,9:0.261456374849;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.238898166431;HOX{A5,B5}:0.169276519159;HLF:0.16709840538;ATF4:0.148591896776;EGR1..3:0.146973831227;HMX1:0.145406342498;TFAP2B:0.135431508861;NR3C1:0.130785481433;NR1H4:0.127070061072;CDC5L:0.122984560097;NFE2L1:0.110784806616;MYOD1:0.10816803026;HES1:0.0893968505854;GLI1..3:0.0839225323902;bHLH_family:0.0735175993642;STAT2,4,6:0.0706453329669;ALX4:0.069724678216;STAT1,3:0.0669763564335;TEAD1:0.0503426564235;ARID5B:0.0502196399355;PRRX1,2:0.0488597885794;EBF1:0.0414603309653;POU6F1:0.0265653864598;TFDP1:0.0246299327168;PAX2:0.0200832940543;NANOG:-3.09802577455e-05;ZBTB6:-0.00147446769269;TLX1..3_NFIC{dimer}:-0.00306260768152;ZFP161:-0.00694591392201;ATF5_CREB3:-0.0115453635131;CEBPA,B_DDIT3:-0.0212266441973;TBX4,5:-0.0612625048887;HIC1:-0.0628574915268;ZNF143:-0.0684661477392;LEF1_TCF7_TCF7L1,2:-0.0771511198408;EVI1:-0.084843909715;MYFfamily:-0.0893153166607;FOXN1:-0.0918603234384;ATF2:-0.093894025537;BPTF:-0.120148943042;PDX1:-0.128053675444;NHLH1,2:-0.133813246618;IKZF1:-0.133852029113;TEF:-0.137440403729;GTF2A1,2:-0.140890389743;TP53:-0.150260901987;GFI1:-0.162691883011;NRF1:-0.16529510894;POU2F1..3:-0.165622390559;PAX1,9:-0.181025232042;GFI1B:-0.192724499821;SOX2:-0.197573853102;GZF1:-0.199856886161;ESRRA:-0.200548244549;TFAP4:-0.20274143221;ZEB1:-0.203694238844;SPZ1:-0.204303937207;RORA:-0.205420906677;TAL1_TCF{3,4,12}:-0.207816856638;IRF7:-0.208948445331;FOX{F1,F2,J1}:-0.212119127129;OCT4_SOX2{dimer}:-0.215352211047;PAX6:-0.218810334197;AHR_ARNT_ARNT2:-0.220677137519;SNAI1..3:-0.223411417168;ZNF238:-0.224552750287;FOXL1:-0.228802549195;HSF1,2:-0.237209055947;REST:-0.238449944122;ELK1,4_GABP{A,B1}:-0.244433350942;MEF2{A,B,C,D}:-0.246854329702;NFIX:-0.248745718963;EN1,2:-0.253878854707;RXR{A,B,G}:-0.257189194077;AIRE:-0.257954177073;IKZF2:-0.260209237786;NFIL3:-0.265112738548;NANOG{mouse}:-0.269078135542;GATA6:-0.26929254197;VSX1,2:-0.27009374118;CUX2:-0.29875118853;SOX17:-0.301099577507;HNF4A_NR2F1,2:-0.304587230681;EP300:-0.315510420778;PITX1..3:-0.325697609011;MAFB:-0.336359582073;ADNP_IRX_SIX_ZHX:-0.345532008995;XBP1:-0.34676682898;FOXP3:-0.347107411099;NKX3-2:-0.35544424705;ZIC1..3:-0.366258090534;DBP:-0.37218326891;AR:-0.374616949419;MED-1{core}:-0.376294138538;RREB1:-0.398358035979;BREu{core}:-0.398726594829;HOX{A4,D4}:-0.400453682614;GTF2I:-0.402367317395;TFCP2:-0.407664842629;NKX2-1,4:-0.427493338496;HOX{A6,A7,B6,B7}:-0.428504563254;NFY{A,B,C}:-0.437225936005;DMAP1_NCOR{1,2}_SMARC:-0.439039844179;NR5A1,2:-0.448546584354;SREBF1,2:-0.448609343122;FOX{D1,D2}:-0.453837256789;FOXD3:-0.454653389107;PAX3,7:-0.455765642153;RFX2..5_RFXANK_RFXAP:-0.459967148562;MYB:-0.461043878033;MTE{core}:-0.46343424047;RUNX1..3:-0.467557013184;IRF1,2:-0.469790061329;CREB1:-0.470950397822;TFAP2{A,C}:-0.491788548029;MTF1:-0.497492393501;SPIB:-0.501007979366;SRF:-0.51323937039;SOX{8,9,10}:-0.519772582436;CRX:-0.519773100077;YY1:-0.539349194304;E2F1..5:-0.539609960626;NFATC1..3:-0.556362674505;HBP1_HMGB_SSRP1_UBTF:-0.56085315675;T:-0.565714177277;POU5F1:-0.582682577389;JUN:-0.589886162779;FOXA2:-0.611268645878;RBPJ:-0.635711000588;ESR1:-0.653554727547;ETS1,2:-0.65736936129;FOX{I1,J2}:-0.670971861893;LMO2:-0.673235547485;CDX1,2,4:-0.681347872245;SPI1:-0.683085871034;FOXM1:-0.722204244417;NKX6-1,2:-0.725106681799;NKX2-3_NKX2-5:-0.731621068986;NKX2-2,8:-0.732698320231;HMGA1,2:-0.763310208271;HAND1,2:-0.766017081262;ZNF384:-0.767180968004;TLX2:-0.770549584151;MAZ:-0.789750404023;SOX5:-0.816376174292;MYBL2:-0.853078267193;TOPORS:-0.854311775686;GCM1,2:-0.866680061312;PATZ1:-0.876516362044;MZF1:-0.900038281465;KLF4:-0.997237208506;PAX5:-1.00895331859;FOXP1:-1.02756746085;ELF1,2,4:-1.0614225473;PRDM1:-1.09375250529;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.11534033464;GATA4:-1.25920186219;FOXO1,3,4:-1.3161427503;TGIF1:-1.33939535301
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11843-124H7;search_select_hide=table117:FF:11843-124H7
}}
}}

Latest revision as of 18:23, 4 June 2020

Name:serous adenocarcinoma cell line:SK-OV-3-R after co-culture with SOC-57-02-G, biol_rep1
Species:Human (Homo sapiens)
Library ID:CNhs13508
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005193
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13508 CAGE DRX007999 DRR008871
Accession ID Hg19

Library idBAMCTSS
CNhs13508 DRZ000296 DRZ001681
Accession ID Hg38

Library idBAMCTSS
CNhs13508 DRZ011646 DRZ013031
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0787
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.112
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0352
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0645
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0301
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.169
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.177
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.728
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0512
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.117
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.514
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.121
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0358
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0749
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.501
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13508

Jaspar motifP-value
MA0002.20.527
MA0003.10.191
MA0004.10.856
MA0006.10.253
MA0007.10.0122
MA0009.10.341
MA0014.10.00245
MA0017.10.753
MA0018.20.0393
MA0019.10.542
MA0024.10.00573
MA0025.10.563
MA0027.10.693
MA0028.10.331
MA0029.10.06
MA0030.10.381
MA0031.10.633
MA0035.20.494
MA0038.10.449
MA0039.23.10355e-4
MA0040.10.753
MA0041.10.51
MA0042.10.764
MA0043.10.111
MA0046.10.723
MA0047.20.648
MA0048.10.433
MA0050.10.0621
MA0051.10.456
MA0052.10.117
MA0055.10.782
MA0057.10.355
MA0058.10.73
MA0059.10.367
MA0060.10.166
MA0061.10.0905
MA0062.20.00131
MA0065.20.395
MA0066.10.424
MA0067.10.527
MA0068.12.05393e-4
MA0069.10.245
MA0070.10.815
MA0071.10.146
MA0072.10.583
MA0073.10.624
MA0074.10.0448
MA0076.10.0126
MA0077.10.164
MA0078.10.971
MA0079.20.379
MA0080.24.33007e-7
MA0081.10.00288
MA0083.10.649
MA0084.10.281
MA0087.10.55
MA0088.10.57
MA0090.10.667
MA0091.10.777
MA0092.10.799
MA0093.10.778
MA0099.21.21921e-23
MA0100.10.66
MA0101.10.00321
MA0102.20.418
MA0103.10.0302
MA0104.20.939
MA0105.10.261
MA0106.10.525
MA0107.10.00134
MA0108.20.026
MA0111.10.547
MA0112.20.349
MA0113.10.806
MA0114.10.977
MA0115.10.145
MA0116.10.992
MA0117.10.725
MA0119.10.405
MA0122.10.699
MA0124.10.86
MA0125.10.644
MA0131.10.674
MA0135.10.178
MA0136.11.75766e-7
MA0137.20.207
MA0138.20.339
MA0139.10.917
MA0140.10.872
MA0141.10.0401
MA0142.10.801
MA0143.10.539
MA0144.10.523
MA0145.10.306
MA0146.10.795
MA0147.10.847
MA0148.10.842
MA0149.10.0268
MA0150.10.00205
MA0152.10.104
MA0153.10.0424
MA0154.10.9
MA0155.10.937
MA0156.13.01825e-5
MA0157.10.859
MA0159.10.0849
MA0160.10.0241
MA0162.10.654
MA0163.10.0574
MA0164.10.196
MA0258.10.219
MA0259.10.084



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13508

Novel motifP-value
10.419
100.798
1000.0228
1010.779
1020.778
1030.342
1040.501
1050.906
1060.246
1070.549
1080.615
1090.0382
110.632
1100.429
1110.315
1120.268
1130.163
1140.219
1150.81
1160.885
1170.665
1180.108
1190.411
120.301
1200.166
1210.825
1220.986
1230.0807
1240.547
1250.229
1260.705
1270.0612
1280.234
1290.452
130.0657
1300.792
1310.672
1320.492
1330.0123
1340.743
1350.516
1360.293
1370.861
1380.373
1390.717
140.525
1400.545
1410.861
1420.884
1430.023
1440.114
1450.884
1460.98
1470.169
1480.657
1490.597
150.0282
1500.212
1510.949
1520.0285
1530.671
1540.771
1550.537
1560.0565
1570.678
1580.835
1590.738
160.342
1600.956
1610.782
1620.387
1630.268
1640.983
1650.904
1660.327
1670.0899
1680.866
1690.8
170.994
180.11
190.589
20.254
200.16
210.609
220.74
230.143
240.0376
250.668
260.292
270.312
280.61
290.131
30.825
300.857
310.985
320.276
330.00224
340.0242
350.913
360.39
370.0214
380.578
390.2
40.0746
400.0109
410.955
420.808
430.122
440.0184
450.679
460.286
470.916
480.869
490.2
50.279
500.411
510.815
520.238
530.0208
540.948
550.667
560.723
570.974
580.73
590.793
60.843
600.142
610.783
620.935
630.911
640.47
650.249
661.82374e-4
670.542
680.301
690.413
70.305
700.173
710.378
720.706
730.0223
740.793
750.854
760.216
770.432
780.452
790.585
80.0316
800.871
810.64
820.56
830.0162
840.921
850.0848
860.844
870.00664
880.997
890.869
90.414
900.654
910.836
920.864
930.919
940.941
950.0585
960.591
970.509
980.661
990.706



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13508


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002149 (epithelial cell of uterus)
0002255 (stromal cell of endometrium)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
305 (carcinoma)
120 (female reproductive organ cancer)
299 (adenocarcinoma)
3001 (female reproductive endometrioid cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000995 (uterus)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0103803 (serous adenocarcinoma cell line sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100658 (uterine adenocarcinoma cell sample)
0101555 (endometrial cancer cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005795 (embryonic uterus)
UBERON:0010316 (germ layer / neural crest)

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