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{{f5samples
{{f5samples
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Line 35: Line 41:
|fonse_treatment_closure=FF:0000625,FF:0000632,FF:0000639,FF:0011134,FF:11894-125E4
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|id=FF:11894-125E4
|id=FF:11894-125E4
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|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11894
|name=Hep-2 cells treated with Streptococci strain JRS4, biol_rep1
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Line 42: Line 60:
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Line 54: Line 75:
|rna_rin=9.5
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|sample_cell_line=Hep-2
Line 69: Line 91:
|sample_ethnicity=
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.26316263140678e-257!GO:0005737;cytoplasm;2.4482451449573e-210!GO:0043226;organelle;1.56555855509781e-206!GO:0043229;intracellular organelle;6.875169877845e-206!GO:0043227;membrane-bound organelle;1.71398876876492e-205!GO:0043231;intracellular membrane-bound organelle;1.88712905673226e-205!GO:0044422;organelle part;6.91894786589458e-178!GO:0044446;intracellular organelle part;8.6488865103177e-176!GO:0044444;cytoplasmic part;6.47091334445581e-156!GO:0032991;macromolecular complex;7.74820975329099e-123!GO:0030529;ribonucleoprotein complex;2.65551895654853e-103!GO:0005739;mitochondrion;1.09192354010043e-100!GO:0044237;cellular metabolic process;5.26583601910792e-93!GO:0043233;organelle lumen;1.88771978626489e-89!GO:0031974;membrane-enclosed lumen;1.88771978626489e-89!GO:0044238;primary metabolic process;2.187943200221e-89!GO:0044428;nuclear part;5.03112359694792e-88!GO:0003723;RNA binding;5.24037535797883e-83!GO:0005634;nucleus;2.94979640869661e-75!GO:0043170;macromolecule metabolic process;6.24268192202838e-75!GO:0005515;protein binding;1.30338938134168e-69!GO:0044429;mitochondrial part;2.75261394838793e-65!GO:0005840;ribosome;1.06717961106202e-62!GO:0006396;RNA processing;2.20228067414076e-62!GO:0043234;protein complex;2.20228067414076e-62!GO:0006412;translation;2.97252947028015e-61!GO:0031090;organelle membrane;3.20057361246757e-59!GO:0031967;organelle envelope;4.68887868801124e-57!GO:0031975;envelope;7.62935891436014e-57!GO:0003735;structural constituent of ribosome;2.08417494273153e-54!GO:0044249;cellular biosynthetic process;3.78967665682682e-54!GO:0009058;biosynthetic process;2.38366148268242e-53!GO:0031981;nuclear lumen;3.22888596775306e-51!GO:0016043;cellular component organization and biogenesis;9.241233286654e-49!GO:0033279;ribosomal subunit;1.15296818156088e-47!GO:0019538;protein metabolic process;2.8236607496328e-46!GO:0015031;protein transport;3.55076445891236e-45!GO:0005829;cytosol;2.86669262828377e-44!GO:0033036;macromolecule localization;4.08700892265368e-44!GO:0043228;non-membrane-bound organelle;7.67739880041735e-44!GO:0043232;intracellular non-membrane-bound organelle;7.67739880041735e-44!GO:0009059;macromolecule biosynthetic process;1.58411886400997e-43!GO:0006259;DNA metabolic process;6.41382510943728e-43!GO:0016071;mRNA metabolic process;3.43909665658559e-42!GO:0005740;mitochondrial envelope;4.19248862703148e-42!GO:0008380;RNA splicing;3.9809793616844e-41!GO:0045184;establishment of protein localization;5.51586705954304e-41!GO:0044260;cellular macromolecule metabolic process;1.85265432547349e-40!GO:0044267;cellular protein metabolic process;2.72901188328687e-40!GO:0008104;protein localization;3.28153407114497e-40!GO:0019866;organelle inner membrane;6.96628323833643e-40!GO:0031966;mitochondrial membrane;1.55277122382021e-39!GO:0006397;mRNA processing;2.12325789832569e-38!GO:0005743;mitochondrial inner membrane;8.69321641394996e-38!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.00950354330218e-37!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.98014324116768e-37!GO:0065003;macromolecular complex assembly;1.25725735224985e-36!GO:0043283;biopolymer metabolic process;1.38624873397266e-36!GO:0006996;organelle organization and biogenesis;1.21771069957147e-35!GO:0046907;intracellular transport;2.89325652338019e-35!GO:0010467;gene expression;1.18941220665692e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.21878930895755e-32!GO:0007049;cell cycle;4.81909526194983e-32!GO:0022607;cellular component assembly;8.42081563013055e-32!GO:0006886;intracellular protein transport;2.3893645080305e-30!GO:0005681;spliceosome;4.12653586958034e-30!GO:0005654;nucleoplasm;3.59441624435935e-29!GO:0031980;mitochondrial lumen;9.07832179002485e-29!GO:0005759;mitochondrial matrix;9.07832179002485e-29!GO:0000166;nucleotide binding;4.48153739207125e-27!GO:0044445;cytosolic part;9.73534142085659e-27!GO:0006119;oxidative phosphorylation;9.94309169234823e-27!GO:0044455;mitochondrial membrane part;1.64931313226637e-26!GO:0006974;response to DNA damage stimulus;6.56133275130162e-26!GO:0015934;large ribosomal subunit;8.40727475588845e-26!GO:0005730;nucleolus;8.49373666774244e-26!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.59786435254268e-25!GO:0016462;pyrophosphatase activity;1.93634833820203e-25!GO:0016817;hydrolase activity, acting on acid anhydrides;2.48378557080419e-25!GO:0017111;nucleoside-triphosphatase activity;2.1986157648465e-24!GO:0000278;mitotic cell cycle;6.28091621126086e-24!GO:0022402;cell cycle process;7.49357913648008e-24!GO:0051649;establishment of cellular localization;1.14861992487743e-23!GO:0051641;cellular localization;1.35557872716854e-23!GO:0005694;chromosome;2.53014570825032e-23!GO:0015935;small ribosomal subunit;4.26523759245695e-23!GO:0044451;nucleoplasm part;5.67536327256246e-23!GO:0051186;cofactor metabolic process;1.04069416298547e-22!GO:0006281;DNA repair;8.18524647492817e-22!GO:0044427;chromosomal part;8.88489762812814e-22!GO:0006457;protein folding;1.24578698914621e-21!GO:0012505;endomembrane system;1.92653948583064e-21!GO:0005783;endoplasmic reticulum;5.26619590826892e-21!GO:0016874;ligase activity;1.32683209046414e-20!GO:0005746;mitochondrial respiratory chain;3.73212844199215e-20!GO:0022618;protein-RNA complex assembly;7.37095867719236e-20!GO:0006260;DNA replication;8.64363771112136e-20!GO:0009719;response to endogenous stimulus;1.24367480726035e-19!GO:0005761;mitochondrial ribosome;1.36758919807552e-19!GO:0000313;organellar ribosome;1.36758919807552e-19!GO:0022403;cell cycle phase;2.83960746924922e-19!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.99819150482578e-19!GO:0003676;nucleic acid binding;6.66146111722992e-19!GO:0042254;ribosome biogenesis and assembly;1.26289961540594e-18!GO:0017076;purine nucleotide binding;1.88512346577858e-18!GO:0032553;ribonucleotide binding;2.23222312302791e-18!GO:0032555;purine ribonucleotide binding;2.23222312302791e-18!GO:0044432;endoplasmic reticulum part;2.64722091388683e-18!GO:0006732;coenzyme metabolic process;2.97550405015029e-18!GO:0000502;proteasome complex (sensu Eukaryota);3.93457777737666e-18!GO:0050136;NADH dehydrogenase (quinone) activity;4.51593415091609e-18!GO:0003954;NADH dehydrogenase activity;4.51593415091609e-18!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.51593415091609e-18!GO:0000087;M phase of mitotic cell cycle;7.37118821581058e-18!GO:0007067;mitosis;1.41922368708975e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.50852061791226e-17!GO:0008135;translation factor activity, nucleic acid binding;3.75125031224472e-17!GO:0044248;cellular catabolic process;3.84244618045512e-17!GO:0044265;cellular macromolecule catabolic process;9.49286239166894e-17!GO:0005524;ATP binding;2.40900803960675e-16!GO:0042775;organelle ATP synthesis coupled electron transport;2.40900803960675e-16!GO:0042773;ATP synthesis coupled electron transport;2.40900803960675e-16!GO:0016887;ATPase activity;2.56987837292905e-16!GO:0032559;adenyl ribonucleotide binding;2.8136239340573e-16!GO:0051276;chromosome organization and biogenesis;3.31512134539501e-16!GO:0030554;adenyl nucleotide binding;3.8082177325252e-16!GO:0006605;protein targeting;4.0905682099105e-16!GO:0006512;ubiquitin cycle;4.51201613177544e-16!GO:0042623;ATPase activity, coupled;4.70415192888393e-16!GO:0030964;NADH dehydrogenase complex (quinone);4.71795121817395e-16!GO:0045271;respiratory chain complex I;4.71795121817395e-16!GO:0005747;mitochondrial respiratory chain complex I;4.71795121817395e-16!GO:0005635;nuclear envelope;1.3227590348137e-15!GO:0051301;cell division;1.39221933950041e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.48224820884841e-15!GO:0006399;tRNA metabolic process;1.5652303780218e-15!GO:0048770;pigment granule;1.7287504349704e-15!GO:0042470;melanosome;1.7287504349704e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.89043041686449e-15!GO:0044453;nuclear membrane part;3.26504448851662e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;4.05347550387806e-15!GO:0000279;M phase;4.10391645600622e-15!GO:0051082;unfolded protein binding;4.62248330204217e-15!GO:0019941;modification-dependent protein catabolic process;6.8112523557565e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.8112523557565e-15!GO:0009055;electron carrier activity;8.09506789598335e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;1.01640331793458e-14!GO:0000375;RNA splicing, via transesterification reactions;1.01640331793458e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.01640331793458e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.05178083399429e-14!GO:0044257;cellular protein catabolic process;1.1829815175578e-14!GO:0031965;nuclear membrane;1.49030819511117e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.61790980464091e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.25006390463859e-14!GO:0005789;endoplasmic reticulum membrane;5.63680527930201e-14!GO:0008134;transcription factor binding;9.54949885823602e-14!GO:0009057;macromolecule catabolic process;9.61716201333386e-14!GO:0043285;biopolymer catabolic process;1.02729361651973e-13!GO:0003743;translation initiation factor activity;2.51563971124974e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;4.78876241370349e-13!GO:0006364;rRNA processing;5.14266280108673e-13!GO:0005643;nuclear pore;5.70583202953931e-13!GO:0009259;ribonucleotide metabolic process;5.86482692196828e-13!GO:0006413;translational initiation;6.83534783216969e-13!GO:0012501;programmed cell death;6.83534783216969e-13!GO:0006915;apoptosis;1.01181216506206e-12!GO:0051726;regulation of cell cycle;1.0510091599855e-12!GO:0051188;cofactor biosynthetic process;1.13711674945397e-12!GO:0000074;regulation of progression through cell cycle;1.20989048523964e-12!GO:0016072;rRNA metabolic process;1.23453010772762e-12!GO:0006163;purine nucleotide metabolic process;1.55688242565074e-12!GO:0006323;DNA packaging;1.58137935512314e-12!GO:0000785;chromatin;1.59452524987637e-12!GO:0065002;intracellular protein transport across a membrane;1.73502418232539e-12!GO:0016192;vesicle-mediated transport;2.46049913563777e-12!GO:0048193;Golgi vesicle transport;2.52610663542442e-12!GO:0006913;nucleocytoplasmic transport;2.54975593114263e-12!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.87025902106671e-12!GO:0051169;nuclear transport;8.55151123646674e-12!GO:0009150;purine ribonucleotide metabolic process;1.83931979308372e-11!GO:0050657;nucleic acid transport;1.97173238592656e-11!GO:0051236;establishment of RNA localization;1.97173238592656e-11!GO:0050658;RNA transport;1.97173238592656e-11!GO:0030163;protein catabolic process;1.99710130337682e-11!GO:0008219;cell death;2.0921737559821e-11!GO:0016265;death;2.0921737559821e-11!GO:0004386;helicase activity;2.32324601089493e-11!GO:0006403;RNA localization;2.38596953998397e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.4137636350901e-11!GO:0009260;ribonucleotide biosynthetic process;3.29873231717771e-11!GO:0006164;purine nucleotide biosynthetic process;3.95399565991044e-11!GO:0016604;nuclear body;4.67683219716878e-11!GO:0046930;pore complex;5.06571926449911e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.35940116798298e-11!GO:0016491;oxidoreductase activity;5.81768327048419e-11!GO:0006461;protein complex assembly;6.32902366250408e-11!GO:0016070;RNA metabolic process;7.74426343196987e-11!GO:0008026;ATP-dependent helicase activity;8.17684971266209e-11!GO:0006446;regulation of translational initiation;8.80547848058978e-11!GO:0009117;nucleotide metabolic process;1.08198837889229e-10!GO:0006333;chromatin assembly or disassembly;1.12983103569482e-10!GO:0007005;mitochondrion organization and biogenesis;1.2663215907324e-10!GO:0009060;aerobic respiration;1.26792300759694e-10!GO:0009108;coenzyme biosynthetic process;1.32893710023369e-10!GO:0005794;Golgi apparatus;1.40190002858965e-10!GO:0009141;nucleoside triphosphate metabolic process;2.14815259859732e-10!GO:0065004;protein-DNA complex assembly;2.15595003683998e-10!GO:0009199;ribonucleoside triphosphate metabolic process;2.30012077328765e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.42573814989863e-10!GO:0008565;protein transporter activity;3.22074352070631e-10!GO:0043412;biopolymer modification;4.53057494600078e-10!GO:0009152;purine ribonucleotide biosynthetic process;4.58983321580565e-10!GO:0045333;cellular respiration;5.15381249817679e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.69724422615294e-10!GO:0009144;purine nucleoside triphosphate metabolic process;5.69724422615294e-10!GO:0009056;catabolic process;7.20314458702396e-10!GO:0016779;nucleotidyltransferase activity;1.00275630541786e-09!GO:0015986;ATP synthesis coupled proton transport;1.07449676017401e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.07449676017401e-09!GO:0006261;DNA-dependent DNA replication;1.08255000971785e-09!GO:0006366;transcription from RNA polymerase II promoter;1.16257394630951e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.16865190291576e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.17730797263263e-09!GO:0051028;mRNA transport;1.20924675891749e-09!GO:0016787;hydrolase activity;1.25583484475176e-09!GO:0008639;small protein conjugating enzyme activity;1.65825601487047e-09!GO:0017038;protein import;1.66776541733072e-09!GO:0009142;nucleoside triphosphate biosynthetic process;2.11280921352485e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.11280921352485e-09!GO:0046034;ATP metabolic process;2.592513210743e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.83860331668791e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.83860331668791e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.83860331668791e-09!GO:0003697;single-stranded DNA binding;3.1535804214006e-09!GO:0043566;structure-specific DNA binding;4.28680453552583e-09!GO:0004842;ubiquitin-protein ligase activity;4.78654479013844e-09!GO:0019787;small conjugating protein ligase activity;4.78654479013844e-09!GO:0043038;amino acid activation;4.78654479013844e-09!GO:0006418;tRNA aminoacylation for protein translation;4.78654479013844e-09!GO:0043039;tRNA aminoacylation;4.78654479013844e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.24214351312624e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.24214351312624e-09!GO:0019829;cation-transporting ATPase activity;7.37430183675604e-09!GO:0006099;tricarboxylic acid cycle;8.90900899611582e-09!GO:0046356;acetyl-CoA catabolic process;8.90900899611582e-09!GO:0016607;nuclear speck;1.11653827272078e-08!GO:0005793;ER-Golgi intermediate compartment;1.35533690322288e-08!GO:0006084;acetyl-CoA metabolic process;1.37653961179813e-08!GO:0042981;regulation of apoptosis;1.5993400588417e-08!GO:0000775;chromosome, pericentric region;1.74825838032141e-08!GO:0016881;acid-amino acid ligase activity;1.80702816369593e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.83239079763088e-08!GO:0043067;regulation of programmed cell death;1.86015276285608e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.86015276285608e-08!GO:0006754;ATP biosynthetic process;1.99924430317881e-08!GO:0006753;nucleoside phosphate metabolic process;1.99924430317881e-08!GO:0006334;nucleosome assembly;2.12654388625927e-08!GO:0003712;transcription cofactor activity;3.65359078893348e-08!GO:0006464;protein modification process;4.17100247201047e-08!GO:0031497;chromatin assembly;4.26106493078004e-08!GO:0051325;interphase;4.29800002818337e-08!GO:0006752;group transfer coenzyme metabolic process;4.58062146242995e-08!GO:0005819;spindle;6.62062197520576e-08!GO:0006091;generation of precursor metabolites and energy;7.09417281591283e-08!GO:0051329;interphase of mitotic cell cycle;7.23509193261841e-08!GO:0016740;transferase activity;7.90731252795193e-08!GO:0008033;tRNA processing;1.22568290869181e-07!GO:0005657;replication fork;1.2349740549594e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.68758591460232e-07!GO:0051187;cofactor catabolic process;1.77983942148587e-07!GO:0005768;endosome;2.02179023247357e-07!GO:0005762;mitochondrial large ribosomal subunit;2.07794254022572e-07!GO:0000315;organellar large ribosomal subunit;2.07794254022572e-07!GO:0030120;vesicle coat;2.19021342093946e-07!GO:0030662;coated vesicle membrane;2.19021342093946e-07!GO:0009109;coenzyme catabolic process;2.61483436599312e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.72308722821292e-07!GO:0045259;proton-transporting ATP synthase complex;2.78556215867121e-07!GO:0008094;DNA-dependent ATPase activity;3.02148511323775e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.66186307332318e-07!GO:0006916;anti-apoptosis;4.54665803176304e-07!GO:0043623;cellular protein complex assembly;4.68803690660957e-07!GO:0043687;post-translational protein modification;4.98506708520947e-07!GO:0003899;DNA-directed RNA polymerase activity;4.99985661242968e-07!GO:0008654;phospholipid biosynthetic process;5.67379551908779e-07!GO:0043069;negative regulation of programmed cell death;5.93791159197146e-07!GO:0051246;regulation of protein metabolic process;6.34483998313917e-07!GO:0016568;chromatin modification;7.36027433603652e-07!GO:0016853;isomerase activity;7.59409766857679e-07!GO:0000245;spliceosome assembly;8.13175476694597e-07!GO:0043066;negative regulation of apoptosis;8.79233117804206e-07!GO:0048475;coated membrane;8.79233117804206e-07!GO:0030117;membrane coat;8.79233117804206e-07!GO:0032446;protein modification by small protein conjugation;1.13183356132444e-06!GO:0000075;cell cycle checkpoint;1.41320675349855e-06!GO:0015630;microtubule cytoskeleton;1.4523338387318e-06!GO:0051170;nuclear import;1.6801534640897e-06!GO:0005667;transcription factor complex;1.70649963732681e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.73748268047849e-06!GO:0016567;protein ubiquitination;1.81303648624918e-06!GO:0004298;threonine endopeptidase activity;2.09429694634526e-06!GO:0007051;spindle organization and biogenesis;2.09429694634526e-06!GO:0051427;hormone receptor binding;2.28371819419086e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.36019228053503e-06!GO:0006082;organic acid metabolic process;2.48134156800242e-06!GO:0048523;negative regulation of cellular process;2.6042121960877e-06!GO:0019752;carboxylic acid metabolic process;2.63201423428167e-06!GO:0000314;organellar small ribosomal subunit;2.74184517347359e-06!GO:0005763;mitochondrial small ribosomal subunit;2.74184517347359e-06!GO:0003724;RNA helicase activity;2.88804898251616e-06!GO:0009165;nucleotide biosynthetic process;2.91966609978e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.02925270348528e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.32948347062053e-06!GO:0000079;regulation of cyclin-dependent protein kinase activity;4.53511229007691e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.31823523088155e-06!GO:0035257;nuclear hormone receptor binding;5.4596070075445e-06!GO:0006613;cotranslational protein targeting to membrane;5.81199807482615e-06!GO:0005788;endoplasmic reticulum lumen;6.22917030260274e-06!GO:0006606;protein import into nucleus;6.36009495044549e-06!GO:0000151;ubiquitin ligase complex;8.36483375503833e-06!GO:0006302;double-strand break repair;8.36483375503833e-06!GO:0006626;protein targeting to mitochondrion;8.6696955687979e-06!GO:0044452;nucleolar part;8.87420099860016e-06!GO:0006414;translational elongation;9.1810419706624e-06!GO:0005773;vacuole;9.24542094591431e-06!GO:0051168;nuclear export;1.07954138329337e-05!GO:0031324;negative regulation of cellular metabolic process;1.29897787996479e-05!GO:0003924;GTPase activity;1.47460896342887e-05!GO:0046474;glycerophospholipid biosynthetic process;1.67063688019303e-05!GO:0046483;heterocycle metabolic process;1.79762968541019e-05!GO:0005813;centrosome;1.91111798115065e-05!GO:0008168;methyltransferase activity;2.03922926488722e-05!GO:0045454;cell redox homeostasis;2.05287175703856e-05!GO:0016741;transferase activity, transferring one-carbon groups;2.2167533083792e-05!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;2.32234485475475e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.34511468463864e-05!GO:0006839;mitochondrial transport;2.81535909011589e-05!GO:0003682;chromatin binding;2.84130157479909e-05!GO:0005770;late endosome;2.92343852692561e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.01049916875637e-05!GO:0015399;primary active transmembrane transporter activity;3.01049916875637e-05!GO:0044440;endosomal part;3.01049916875637e-05!GO:0010008;endosome membrane;3.01049916875637e-05!GO:0016859;cis-trans isomerase activity;3.64447865116399e-05!GO:0005815;microtubule organizing center;3.68522271927638e-05!GO:0000786;nucleosome;3.82535928517855e-05!GO:0043021;ribonucleoprotein binding;3.87009547768004e-05!GO:0003713;transcription coactivator activity;4.17412576776419e-05!GO:0000323;lytic vacuole;4.17412576776419e-05!GO:0005764;lysosome;4.17412576776419e-05!GO:0007088;regulation of mitosis;4.19537908414758e-05!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;4.19537908414758e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.21698523262162e-05!GO:0050662;coenzyme binding;4.65724445446117e-05!GO:0006950;response to stress;4.69085212253682e-05!GO:0016126;sterol biosynthetic process;4.883683840858e-05!GO:0019867;outer membrane;4.99094973438637e-05!GO:0008610;lipid biosynthetic process;5.01639178049328e-05!GO:0043681;protein import into mitochondrion;5.08981331834461e-05!GO:0006793;phosphorus metabolic process;5.32937882416799e-05!GO:0006796;phosphate metabolic process;5.32937882416799e-05!GO:0051052;regulation of DNA metabolic process;5.51573781725761e-05!GO:0030867;rough endoplasmic reticulum membrane;6.04138997785694e-05!GO:0031968;organelle outer membrane;6.40312512028906e-05!GO:0003690;double-stranded DNA binding;6.67359730034829e-05!GO:0009892;negative regulation of metabolic process;6.83244004104087e-05!GO:0006612;protein targeting to membrane;7.57446634855743e-05!GO:0048519;negative regulation of biological process;7.85362780819508e-05!GO:0005753;mitochondrial proton-transporting ATP synthase complex;8.04847780531394e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;8.39464802514329e-05!GO:0000776;kinetochore;8.92308585282225e-05!GO:0008186;RNA-dependent ATPase activity;9.17803113185968e-05!GO:0046489;phosphoinositide biosynthetic process;9.78521673430947e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;9.88428131424906e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000108926695408082!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000120034144894216!GO:0045786;negative regulation of progression through cell cycle;0.000124033402905558!GO:0005525;GTP binding;0.000127773965171781!GO:0006383;transcription from RNA polymerase III promoter;0.000129896401464013!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000136348197945664!GO:0006310;DNA recombination;0.00014276169856272!GO:0003684;damaged DNA binding;0.000146708532051722!GO:0007059;chromosome segregation;0.000154403589715882!GO:0005791;rough endoplasmic reticulum;0.000165846477547591!GO:0051789;response to protein stimulus;0.000181334836651058!GO:0006986;response to unfolded protein;0.000181334836651058!GO:0004527;exonuclease activity;0.000183083937495368!GO:0005798;Golgi-associated vesicle;0.000183704943353081!GO:0006695;cholesterol biosynthetic process;0.000187287141614541!GO:0030880;RNA polymerase complex;0.000235611173009715!GO:0000059;protein import into nucleus, docking;0.0002388267008775!GO:0005741;mitochondrial outer membrane;0.00024042687658889!GO:0004004;ATP-dependent RNA helicase activity;0.000257036785682097!GO:0031988;membrane-bound vesicle;0.000258992536741456!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000260351096109292!GO:0006520;amino acid metabolic process;0.000272472090834847!GO:0042802;identical protein binding;0.000286932125688325!GO:0016310;phosphorylation;0.000312040407016989!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00032150376514154!GO:0006650;glycerophospholipid metabolic process;0.00032154214072609!GO:0004518;nuclease activity;0.000322587979849408!GO:0033116;ER-Golgi intermediate compartment membrane;0.000328299170664678!GO:0019843;rRNA binding;0.000361504170373058!GO:0043284;biopolymer biosynthetic process;0.000370589898080617!GO:0048037;cofactor binding;0.000370891479721276!GO:0044431;Golgi apparatus part;0.000376094258930366!GO:0043596;nuclear replication fork;0.000376529477451394!GO:0003678;DNA helicase activity;0.000376932954211319!GO:0016023;cytoplasmic membrane-bound vesicle;0.000403153797180544!GO:0009112;nucleobase metabolic process;0.000437708570396963!GO:0051920;peroxiredoxin activity;0.00048224855721131!GO:0008361;regulation of cell size;0.000534721588914471!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000534721588914471!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000542814632346273!GO:0003729;mRNA binding;0.000557164457500303!GO:0001558;regulation of cell growth;0.000559286881537148!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000590253363584528!GO:0000428;DNA-directed RNA polymerase complex;0.000590253363584528!GO:0051540;metal cluster binding;0.000608553371387812!GO:0051536;iron-sulfur cluster binding;0.000608553371387812!GO:0006275;regulation of DNA replication;0.000615063009467489!GO:0006118;electron transport;0.000619015462836534!GO:0007006;mitochondrial membrane organization and biogenesis;0.000621946602250817!GO:0005048;signal sequence binding;0.000621946602250817!GO:0031252;leading edge;0.000639853697231556!GO:0016049;cell growth;0.000639853697231556!GO:0065009;regulation of a molecular function;0.000658993741444554!GO:0016564;transcription repressor activity;0.000668094573176222!GO:0005684;U2-dependent spliceosome;0.000680535517680558!GO:0016563;transcription activator activity;0.000684147554240236!GO:0009116;nucleoside metabolic process;0.000693103045804997!GO:0048471;perinuclear region of cytoplasm;0.000716357984153972!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000724724928437071!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000724724928437071!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000724724928437071!GO:0005905;coated pit;0.000760687070328002!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000766804929272826!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000766804929272826!GO:0005885;Arp2/3 protein complex;0.000772851415118553!GO:0046467;membrane lipid biosynthetic process;0.000775949588346925!GO:0016363;nuclear matrix;0.000852174844905316!GO:0031072;heat shock protein binding;0.000910743693297122!GO:0006506;GPI anchor biosynthetic process;0.000957851268330068!GO:0030176;integral to endoplasmic reticulum membrane;0.00099952910733408!GO:0015992;proton transport;0.00099952910733408!GO:0016044;membrane organization and biogenesis;0.00100966418196756!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00102659448769285!GO:0006767;water-soluble vitamin metabolic process;0.0010307062610684!GO:0031982;vesicle;0.00107798100882007!GO:0006284;base-excision repair;0.00107798100882007!GO:0032508;DNA duplex unwinding;0.001082056805263!GO:0032392;DNA geometric change;0.001082056805263!GO:0043492;ATPase activity, coupled to movement of substances;0.00113864087363581!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00115664708485719!GO:0006818;hydrogen transport;0.0011824951252881!GO:0051087;chaperone binding;0.0011974984908067!GO:0030132;clathrin coat of coated pit;0.00121042992402245!GO:0051287;NAD binding;0.0012104476370601!GO:0048487;beta-tubulin binding;0.00124521360428372!GO:0008180;signalosome;0.0013040420276094!GO:0003711;transcription elongation regulator activity;0.0013040420276094!GO:0030118;clathrin coat;0.00131973220818998!GO:0032561;guanyl ribonucleotide binding;0.00133751831527314!GO:0019001;guanyl nucleotide binding;0.00133751831527314!GO:0048500;signal recognition particle;0.00133751831527314!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00134174576009424!GO:0044262;cellular carbohydrate metabolic process;0.00136878559460461!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00140489372885407!GO:0006270;DNA replication initiation;0.00140489372885407!GO:0006405;RNA export from nucleus;0.0014744041942259!GO:0000049;tRNA binding;0.00147651452517815!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00150366420949893!GO:0008312;7S RNA binding;0.00157298370447295!GO:0006505;GPI anchor metabolic process;0.00158533605492873!GO:0030663;COPI coated vesicle membrane;0.00162382599310024!GO:0030126;COPI vesicle coat;0.00162382599310024!GO:0048522;positive regulation of cellular process;0.0016254965520044!GO:0035258;steroid hormone receptor binding;0.00169202532795878!GO:0007052;mitotic spindle organization and biogenesis;0.0016938516857621!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00169754861570517!GO:0030384;phosphoinositide metabolic process;0.00176214596023586!GO:0016272;prefoldin complex;0.00176918831515722!GO:0006352;transcription initiation;0.00177923069086908!GO:0031410;cytoplasmic vesicle;0.00178482643725417!GO:0008632;apoptotic program;0.00183247759948485!GO:0005758;mitochondrial intermembrane space;0.00183825016847493!GO:0006733;oxidoreduction coenzyme metabolic process;0.00185821869256194!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00188771370723182!GO:0043601;nuclear replisome;0.00194583409232106!GO:0030894;replisome;0.00194583409232106!GO:0007093;mitotic cell cycle checkpoint;0.00194806677256222!GO:0016481;negative regulation of transcription;0.00197183615759748!GO:0006497;protein amino acid lipidation;0.00197183615759748!GO:0006268;DNA unwinding during replication;0.0020004544087333!GO:0006007;glucose catabolic process;0.00217156261934171!GO:0003746;translation elongation factor activity;0.00225096532392952!GO:0008408;3'-5' exonuclease activity;0.002361742441575!GO:0005876;spindle microtubule;0.0024887501292108!GO:0008320;protein transmembrane transporter activity;0.00250120693290045!GO:0006519;amino acid and derivative metabolic process;0.00260629430949907!GO:0000086;G2/M transition of mitotic cell cycle;0.0026162831165611!GO:0000082;G1/S transition of mitotic cell cycle;0.00263188869958978!GO:0005769;early endosome;0.00267019428124691!GO:0009451;RNA modification;0.00296108831337591!GO:0003714;transcription corepressor activity;0.00301621742571767!GO:0006611;protein export from nucleus;0.00303717288254164!GO:0042393;histone binding;0.00320485308184272!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00320559660124952!GO:0015002;heme-copper terminal oxidase activity;0.00320559660124952!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00320559660124952!GO:0004129;cytochrome-c oxidase activity;0.00320559660124952!GO:0042770;DNA damage response, signal transduction;0.00324639955177704!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00324639955177704!GO:0045047;protein targeting to ER;0.00324639955177704!GO:0043065;positive regulation of apoptosis;0.00324639955177704!GO:0016251;general RNA polymerase II transcription factor activity;0.00336061768419769!GO:0051252;regulation of RNA metabolic process;0.00336061768419769!GO:0000178;exosome (RNase complex);0.0034840639233008!GO:0007243;protein kinase cascade;0.00349257573322951!GO:0000139;Golgi membrane;0.00353412702988855!GO:0006144;purine base metabolic process;0.00355925972631083!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0035769014820357!GO:0006401;RNA catabolic process;0.00366428448375099!GO:0015631;tubulin binding;0.00368947943460444!GO:0022890;inorganic cation transmembrane transporter activity;0.00374951540234858!GO:0000096;sulfur amino acid metabolic process;0.00382004537233644!GO:0019899;enzyme binding;0.00384119424626665!GO:0022884;macromolecule transmembrane transporter activity;0.00401303310898065!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.00401303310898065!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00403610912080012!GO:0043068;positive regulation of programmed cell death;0.00409843752097141!GO:0005637;nuclear inner membrane;0.00425991361829765!GO:0006595;polyamine metabolic process;0.00427284522496951!GO:0030137;COPI-coated vesicle;0.00431315374262901!GO:0000228;nuclear chromosome;0.00431315374262901!GO:0004532;exoribonuclease activity;0.00441482610409029!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00441482610409029!GO:0006417;regulation of translation;0.00441482610409029!GO:0008637;apoptotic mitochondrial changes;0.00468202251647715!GO:0030658;transport vesicle membrane;0.00469834714665799!GO:0000287;magnesium ion binding;0.00484791100198396!GO:0016408;C-acyltransferase activity;0.0050026925509753!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00536749879511757!GO:0003725;double-stranded RNA binding;0.00541096950697281!GO:0040008;regulation of growth;0.00544425967867289!GO:0008022;protein C-terminus binding;0.00562321978886213!GO:0031902;late endosome membrane;0.00607351733489576!GO:0050790;regulation of catalytic activity;0.00646723399169042!GO:0045045;secretory pathway;0.00671924380182092!GO:0016125;sterol metabolic process;0.00680183142129034!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00694900760519357!GO:0006509;membrane protein ectodomain proteolysis;0.00725155886603473!GO:0033619;membrane protein proteolysis;0.00725155886603473!GO:0005774;vacuolar membrane;0.00731237213332878!GO:0006402;mRNA catabolic process;0.0073210932642561!GO:0042158;lipoprotein biosynthetic process;0.0073210932642561!GO:0043154;negative regulation of caspase activity;0.00735068199511854!GO:0030125;clathrin vesicle coat;0.00735068199511854!GO:0030665;clathrin coated vesicle membrane;0.00735068199511854!GO:0046982;protein heterodimerization activity;0.00740046801927911!GO:0006400;tRNA modification;0.00741322793360758!GO:0004549;tRNA-specific ribonuclease activity;0.00755436255760955!GO:0008629;induction of apoptosis by intracellular signals;0.00787719279860629!GO:0044255;cellular lipid metabolic process;0.00787719279860629!GO:0004526;ribonuclease P activity;0.00796659743295551!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00800788452315779!GO:0006778;porphyrin metabolic process;0.00808647229019243!GO:0033013;tetrapyrrole metabolic process;0.00808647229019243!GO:0006807;nitrogen compound metabolic process;0.0081438256088174!GO:0009124;nucleoside monophosphate biosynthetic process;0.00817157548091978!GO:0009123;nucleoside monophosphate metabolic process;0.00817157548091978!GO:0031970;organelle envelope lumen;0.00824900118820394!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00826263918306168!GO:0043022;ribosome binding;0.0083634799766504!GO:0046966;thyroid hormone receptor binding;0.00844464302336772!GO:0004003;ATP-dependent DNA helicase activity;0.00845612217181874!GO:0051539;4 iron, 4 sulfur cluster binding;0.00846215130081045!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00861270399348106!GO:0008250;oligosaccharyl transferase complex;0.00861270399348106!GO:0045792;negative regulation of cell size;0.00893031009030153!GO:0005832;chaperonin-containing T-complex;0.00909179108355912!GO:0030660;Golgi-associated vesicle membrane;0.00926337678777384!GO:0006891;intra-Golgi vesicle-mediated transport;0.00991932658481202!GO:0031326;regulation of cellular biosynthetic process;0.00993415163584!GO:0031570;DNA integrity checkpoint;0.00999743039733969!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0102653095941759!GO:0004576;oligosaccharyl transferase activity;0.0102653095941759!GO:0030308;negative regulation of cell growth;0.0105171964725414!GO:0008139;nuclear localization sequence binding;0.0105269752267109!GO:0030659;cytoplasmic vesicle membrane;0.0105269752267109!GO:0016407;acetyltransferase activity;0.0106082984641144!GO:0032259;methylation;0.0108081206664607!GO:0009119;ribonucleoside metabolic process;0.0109816400042093!GO:0043414;biopolymer methylation;0.0109832816305736!GO:0007034;vacuolar transport;0.0109899487764268!GO:0007010;cytoskeleton organization and biogenesis;0.0110031478631648!GO:0031124;mRNA 3'-end processing;0.0117622873034393!GO:0006979;response to oxidative stress;0.0117688221118187!GO:0000725;recombinational repair;0.0118156607442605!GO:0000724;double-strand break repair via homologous recombination;0.0118156607442605!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0120308689471054!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0120704440693519!GO:0006289;nucleotide-excision repair;0.0121743221123085!GO:0044438;microbody part;0.0122724944912083!GO:0044439;peroxisomal part;0.0122724944912083!GO:0030521;androgen receptor signaling pathway;0.0126821455287127!GO:0009889;regulation of biosynthetic process;0.0127005981868319!GO:0007050;cell cycle arrest;0.0127005981868319!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0127310998394009!GO:0000339;RNA cap binding;0.0128045257769627!GO:0000922;spindle pole;0.0128535859817641!GO:0030119;AP-type membrane coat adaptor complex;0.0128693669819989!GO:0005869;dynactin complex;0.0129046960048419!GO:0051338;regulation of transferase activity;0.0130655951134791!GO:0006066;alcohol metabolic process;0.013079402362218!GO:0012506;vesicle membrane;0.01325234029816!GO:0007021;tubulin folding;0.0136643211082458!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0138341614522906!GO:0004540;ribonuclease activity;0.0141094413878257!GO:0000175;3'-5'-exoribonuclease activity;0.0141160775876324!GO:0006740;NADPH regeneration;0.0143013402056104!GO:0006098;pentose-phosphate shunt;0.0143013402056104!GO:0005862;muscle thin filament tropomyosin;0.0145095663674379!GO:0006096;glycolysis;0.0147755141004064!GO:0043488;regulation of mRNA stability;0.0147755141004064!GO:0043487;regulation of RNA stability;0.0147755141004064!GO:0006338;chromatin remodeling;0.0148665062739203!GO:0000070;mitotic sister chromatid segregation;0.0150370165430365!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0151270361911224!GO:0045039;protein import into mitochondrial inner membrane;0.0151270361911224!GO:0016788;hydrolase activity, acting on ester bonds;0.0151670752900622!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.015200317185709!GO:0004523;ribonuclease H activity;0.0152428723361052!GO:0043433;negative regulation of transcription factor activity;0.0162115558275289!GO:0043624;cellular protein complex disassembly;0.0162224714369467!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0164846199374464!GO:0030131;clathrin adaptor complex;0.0165813096429464!GO:0009308;amine metabolic process;0.0167164548889871!GO:0006779;porphyrin biosynthetic process;0.0167164548889871!GO:0033014;tetrapyrrole biosynthetic process;0.0167164548889871!GO:0044437;vacuolar part;0.0167164548889871!GO:0009303;rRNA transcription;0.0168561416957332!GO:0005874;microtubule;0.016932164790505!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0169741518421403!GO:0005669;transcription factor TFIID complex;0.0169741518421403!GO:0043549;regulation of kinase activity;0.0171495760109918!GO:0008234;cysteine-type peptidase activity;0.01716496994949!GO:0046983;protein dimerization activity;0.0174280864539148!GO:0044433;cytoplasmic vesicle part;0.0174443316064936!GO:0030133;transport vesicle;0.0174530940102462!GO:0000030;mannosyltransferase activity;0.017694920637091!GO:0003702;RNA polymerase II transcription factor activity;0.017694920637091!GO:0005663;DNA replication factor C complex;0.017694920637091!GO:0031903;microbody membrane;0.0182368576974477!GO:0005778;peroxisomal membrane;0.0182368576974477!GO:0006769;nicotinamide metabolic process;0.018249386751276!GO:0009161;ribonucleoside monophosphate metabolic process;0.018249386751276!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.018249386751276!GO:0050178;phenylpyruvate tautomerase activity;0.0186477135627051!GO:0004659;prenyltransferase activity;0.0187196712730243!GO:0000819;sister chromatid segregation;0.0188881702248459!GO:0044454;nuclear chromosome part;0.0188886745311976!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0188886745311976!GO:0010257;NADH dehydrogenase complex assembly;0.0188886745311976!GO:0033108;mitochondrial respiratory chain complex assembly;0.0188886745311976!GO:0050681;androgen receptor binding;0.0188886745311976!GO:0008538;proteasome activator activity;0.0209287513676458!GO:0005765;lysosomal membrane;0.0209755905052971!GO:0006378;mRNA polyadenylation;0.0209995116488157!GO:0009003;signal peptidase activity;0.0209995116488157!GO:0032984;macromolecular complex disassembly;0.0210323169786162!GO:0048144;fibroblast proliferation;0.0210323169786162!GO:0048145;regulation of fibroblast proliferation;0.0210323169786162!GO:0008652;amino acid biosynthetic process;0.0212225981072141!GO:0048146;positive regulation of fibroblast proliferation;0.0212691093356409!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0214922315553238!GO:0030508;thiol-disulfide exchange intermediate activity;0.0217593136677476!GO:0042168;heme metabolic process;0.02178110379162!GO:0050794;regulation of cellular process;0.021816791606871!GO:0046519;sphingoid metabolic process;0.021951714397994!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0221644075418637!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0224811838177244!GO:0000726;non-recombinational repair;0.0232025831141084!GO:0006730;one-carbon compound metabolic process;0.0232025831141084!GO:0018196;peptidyl-asparagine modification;0.0232025831141084!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0232025831141084!GO:0006643;membrane lipid metabolic process;0.0232228858479079!GO:0003923;GPI-anchor transamidase activity;0.0237718595518838!GO:0016255;attachment of GPI anchor to protein;0.0237718595518838!GO:0042765;GPI-anchor transamidase complex;0.0237718595518838!GO:0006354;RNA elongation;0.0237950861407556!GO:0001836;release of cytochrome c from mitochondria;0.0239606507990439!GO:0009967;positive regulation of signal transduction;0.0240842259436704!GO:0007040;lysosome organization and biogenesis;0.0245739360018833!GO:0005996;monosaccharide metabolic process;0.0246323262213185!GO:0006360;transcription from RNA polymerase I promoter;0.0250175747484242!GO:0008092;cytoskeletal protein binding;0.0251022139272627!GO:0045859;regulation of protein kinase activity;0.0259094429202658!GO:0006213;pyrimidine nucleoside metabolic process;0.0262448943115028!GO:0019318;hexose metabolic process;0.0263825976476063!GO:0051059;NF-kappaB binding;0.0264712652496004!GO:0031406;carboxylic acid binding;0.0265177543559656!GO:0006672;ceramide metabolic process;0.0266651171493259!GO:0022406;membrane docking;0.0268469288304028!GO:0048278;vesicle docking;0.0268469288304028!GO:0051053;negative regulation of DNA metabolic process;0.0271751287384251!GO:0031529;ruffle organization and biogenesis;0.0275662043575508!GO:0006541;glutamine metabolic process;0.0280349179253254!GO:0004860;protein kinase inhibitor activity;0.0280368419663439!GO:0043189;H4/H2A histone acetyltransferase complex;0.0280483742191086!GO:0006006;glucose metabolic process;0.0280483742191086!GO:0042364;water-soluble vitamin biosynthetic process;0.0282649723838497!GO:0006749;glutathione metabolic process;0.0284313059779422!GO:0046822;regulation of nucleocytoplasmic transport;0.0284625412199423!GO:0008017;microtubule binding;0.0288608510269545!GO:0043241;protein complex disassembly;0.0293531949081863!GO:0005732;small nucleolar ribonucleoprotein complex;0.0293834515307729!GO:0006376;mRNA splice site selection;0.029521146531016!GO:0000389;nuclear mRNA 3'-splice site recognition;0.029521146531016!GO:0016197;endosome transport;0.0295454054128842!GO:0004448;isocitrate dehydrogenase activity;0.0300196376357277!GO:0030134;ER to Golgi transport vesicle;0.0300196376357277!GO:0019362;pyridine nucleotide metabolic process;0.0304682063429635!GO:0016791;phosphoric monoester hydrolase activity;0.0304730468433926!GO:0048518;positive regulation of biological process;0.0308710149304895!GO:0006644;phospholipid metabolic process;0.031310769632481!GO:0017166;vinculin binding;0.0313930331586679!GO:0005658;alpha DNA polymerase:primase complex;0.0315269406951185!GO:0006220;pyrimidine nucleotide metabolic process;0.0317833518195815!GO:0016790;thiolester hydrolase activity;0.0319414756212609!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0320917765826153!GO:0015036;disulfide oxidoreductase activity;0.0321278073687259!GO:0004861;cyclin-dependent protein kinase inhibitor activity;0.0325200598044252!GO:0007017;microtubule-based process;0.0328160276459167!GO:0046365;monosaccharide catabolic process;0.0328313698860954!GO:0046128;purine ribonucleoside metabolic process;0.0331388920622453!GO:0042278;purine nucleoside metabolic process;0.0331388920622453!GO:0042769;DNA damage response, detection of DNA damage;0.0331871023300796!GO:0005777;peroxisome;0.0332752137444226!GO:0042579;microbody;0.0332752137444226!GO:0008299;isoprenoid biosynthetic process;0.0332823224704993!GO:0007041;lysosomal transport;0.0339641822718904!GO:0000792;heterochromatin;0.0342504249040994!GO:0000152;nuclear ubiquitin ligase complex;0.0344871179557922!GO:0006629;lipid metabolic process;0.0349575982871909!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0350683055276171!GO:0008203;cholesterol metabolic process;0.0351811754691802!GO:0008536;Ran GTPase binding;0.0352127911825127!GO:0019783;small conjugating protein-specific protease activity;0.0352993127070202!GO:0030677;ribonuclease P complex;0.0353321689279068!GO:0050811;GABA receptor binding;0.0355644335954301!GO:0030127;COPII vesicle coat;0.0357134144547071!GO:0012507;ER to Golgi transport vesicle membrane;0.0357134144547071!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0357134144547071!GO:0009081;branched chain family amino acid metabolic process;0.0362049474986679!GO:0006739;NADP metabolic process;0.0362053594586975!GO:0031371;ubiquitin conjugating enzyme complex;0.0362962884351461!GO:0005784;translocon complex;0.0365290834541163!GO:0031123;RNA 3'-end processing;0.0365290834541163!GO:0006904;vesicle docking during exocytosis;0.0366217237964675!GO:0051716;cellular response to stimulus;0.0367177461621364!GO:0019206;nucleoside kinase activity;0.0369683726142528!GO:0030032;lamellipodium biogenesis;0.037134822345895!GO:0007033;vacuole organization and biogenesis;0.0372852267001913!GO:0045926;negative regulation of growth;0.0375451645654476!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0375451645654476!GO:0006596;polyamine biosynthetic process;0.0378169302376247!GO:0035267;NuA4 histone acetyltransferase complex;0.0380155880124181!GO:0045893;positive regulation of transcription, DNA-dependent;0.0383254831409102!GO:0000077;DNA damage checkpoint;0.0383254831409102!GO:0045936;negative regulation of phosphate metabolic process;0.0389478873345234!GO:0006917;induction of apoptosis;0.0394820636179529!GO:0030911;TPR domain binding;0.039733632772943!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0405928902596528!GO:0004843;ubiquitin-specific protease activity;0.0408062225638738!GO:0022411;cellular component disassembly;0.0413621799419519!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0413860085185469!GO:0046112;nucleobase biosynthetic process;0.0417318183450492!GO:0031577;spindle checkpoint;0.0422492323916077!GO:0016453;C-acetyltransferase activity;0.042364619683824!GO:0007346;regulation of progression through mitotic cell cycle;0.0425150281430794!GO:0030433;ER-associated protein catabolic process;0.0425150281430794!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0425150281430794!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0438649350435231!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0438649350435231!GO:0030100;regulation of endocytosis;0.0443551349519524!GO:0008415;acyltransferase activity;0.0445999341717418!GO:0006783;heme biosynthetic process;0.0446023333133287!GO:0045892;negative regulation of transcription, DNA-dependent;0.044637856221639!GO:0046164;alcohol catabolic process;0.0447262703863249!GO:0001726;ruffle;0.0450506872492892!GO:0030503;regulation of cell redox homeostasis;0.0450668310496258!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0453499695313547!GO:0012502;induction of programmed cell death;0.0454457155096877!GO:0006897;endocytosis;0.0465720438214154!GO:0010324;membrane invagination;0.0465720438214154!GO:0016417;S-acyltransferase activity;0.0468666717266247!GO:0030036;actin cytoskeleton organization and biogenesis;0.0469513719363985!GO:0008426;protein kinase C inhibitor activity;0.0473755368308654!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0476683588820414!GO:0005971;ribonucleoside-diphosphate reductase complex;0.0477972501278958!GO:0030518;steroid hormone receptor signaling pathway;0.0484494569907502!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0484797877085477!GO:0001522;pseudouridine synthesis;0.0485371124368722!GO:0016860;intramolecular oxidoreductase activity;0.0487971608754885!GO:0008287;protein serine/threonine phosphatase complex;0.0491824615806516!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0491824615806516!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0491824615806516!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0491824615806516!GO:0008601;protein phosphatase type 2A regulator activity;0.0493685172647824!GO:0048468;cell development;0.0496445866699911
|sample_id=11894
|sample_id=11894
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=
|sample_tissue=
|top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.96146599585;HES1:1.84384225587;FOXQ1:1.66176322348;E2F1..5:1.55200980964;ESRRA:1.53499155208;NR5A1,2:1.47317969871;FOXM1:1.33248571484;PPARG:1.28903526227;ELK1,4_GABP{A,B1}:1.14985498036;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.12141516455;YY1:0.966405704251;bHLH_family:0.90525608562;HIF1A:0.793611477784;NR6A1:0.731328064981;ZNF143:0.723984212349;NRF1:0.694462422964;NKX3-1:0.687817888892;HOX{A6,A7,B6,B7}:0.671680050668;PAX1,9:0.608212437306;NFY{A,B,C}:0.607625683924;ARID5B:0.605722042048;MYB:0.603798841982;HNF4A_NR2F1,2:0.603641451959;FOXD3:0.572239791365;EP300:0.570254141163;NKX3-2:0.566087567053;NFE2L1:0.517319889938;ZEB1:0.503380773948;FOXN1:0.501251400928;IKZF1:0.486099672952;SNAI1..3:0.480565199065;PAX8:0.442555167171;PAX5:0.419781480783;TEAD1:0.413124261386;TBX4,5:0.394545179742;ZBTB16:0.379855476449;IKZF2:0.348487852382;IRF7:0.334383380947;UFEwm:0.330735540867;GCM1,2:0.310746586525;CREB1:0.303561164357;MYOD1:0.288542164763;GFI1:0.287366834182;HOXA9_MEIS1:0.283194995053;POU3F1..4:0.27722421711;TP53:0.271931984563;POU1F1:0.254818363261;ZNF148:0.231439204032;PAX2:0.229016203645;GTF2A1,2:0.168445938065;FOX{F1,F2,J1}:0.161411556105;ALX4:0.141166932364;HOX{A5,B5}:0.135624093949;ATF5_CREB3:0.129572368824;RXR{A,B,G}:0.129156400885;HLF:0.117531451332;VSX1,2:0.102023649756;MYBL2:0.0878024435129;OCT4_SOX2{dimer}:0.082264312568;BACH2:0.0732428150258;HAND1,2:0.0652451279799;NFE2:0.0566242632324;NFE2L2:0.0515076757951;CDC5L:0.046026053031;RFX2..5_RFXANK_RFXAP:0.043710975854;LHX3,4:0.043459084862;TFDP1:0.0238898604659;PITX1..3:0.0144212979736;HSF1,2:0.000151200844005;TEF:-0.0125635194609;RORA:-0.0147838680369;GFI1B:-0.0166888647734;EN1,2:-0.022678903936;FOS_FOS{B,L1}_JUN{B,D}:-0.0353905763576;GLI1..3:-0.0429768651324;TBP:-0.0472501338611;HNF1A:-0.0515870385566;CDX1,2,4:-0.0559988469277;ZNF423:-0.0720903139421;LEF1_TCF7_TCF7L1,2:-0.0738189120308;ZNF384:-0.08064408537;MEF2{A,B,C,D}:-0.0816029923765;MTF1:-0.0937159680725;ONECUT1,2:-0.0946682462415;CUX2:-0.102133402107;ATF6:-0.103820695261;FOXP3:-0.105594818453;ESR1:-0.11252573196;SOX{8,9,10}:-0.113077041903;PRRX1,2:-0.122054486967;PAX4:-0.1701605415;NR1H4:-0.173833645188;ELF1,2,4:-0.175235391623;ZBTB6:-0.180563314551;SREBF1,2:-0.189970770244;HOX{A4,D4}:-0.19267373803;ALX1:-0.196152007748;STAT2,4,6:-0.196764024916;LMO2:-0.202857028532;NR3C1:-0.203928290053;NANOG:-0.206636546773;PDX1:-0.216783533633;PAX3,7:-0.221433109988;NFKB1_REL_RELA:-0.234176629356;BREu{core}:-0.241592240157;NKX2-2,8:-0.242129465505;CEBPA,B_DDIT3:-0.251954391005;GZF1:-0.252029271381;FOXL1:-0.252485312778;NKX6-1,2:-0.263143030021;TLX1..3_NFIC{dimer}:-0.268584696106;ATF4:-0.282537035876;FOSL2:-0.305401793647;PBX1:-0.311066535075;STAT5{A,B}:-0.31891577695;AHR_ARNT_ARNT2:-0.323460805926;MAFB:-0.332962477559;AIRE:-0.340016456215;JUN:-0.351017291324;IRF1,2:-0.366689393621;EBF1:-0.38429523301;KLF4:-0.386394764688;NKX2-1,4:-0.426565931132;RBPJ:-0.427912498759;HBP1_HMGB_SSRP1_UBTF:-0.434032933059;PAX6:-0.436829339293;HIC1:-0.443988275727;DBP:-0.44806147477;NFIL3:-0.457597120791;SPIB:-0.457616931664;TFCP2:-0.485137409159;HMGA1,2:-0.49035219223;FOX{I1,J2}:-0.49374604123;ADNP_IRX_SIX_ZHX:-0.495389824302;GTF2I:-0.49780035724;RFX1:-0.498099188569;GATA6:-0.522199475337;BPTF:-0.523671672949;ZFP161:-0.535013572383;FOXP1:-0.539884784904;POU2F1..3:-0.542534988271;EVI1:-0.551248337649;T:-0.557882473877;SRF:-0.558543733757;CRX:-0.564656077691;SPI1:-0.617237395864;RXRA_VDR{dimer}:-0.648424230498;TFAP2B:-0.671565266861;SP1:-0.68487934896;SOX5:-0.694825350379;TFAP2{A,C}:-0.698445384393;AR:-0.700779746523;RUNX1..3:-0.704022237358;SOX17:-0.704244634538;FOXA2:-0.711704665724;TOPORS:-0.722917982193;NFATC1..3:-0.746021275997;TFAP4:-0.760813703872;ETS1,2:-0.768828172319;MED-1{core}:-0.76937811795;EGR1..3:-0.820048342089;NKX2-3_NKX2-5:-0.822164366439;XCPE1{core}:-0.82301509056;GATA4:-0.834813646418;REST:-0.851408937131;FOX{D1,D2}:-0.853476936002;DMAP1_NCOR{1,2}_SMARC:-0.888532277693;NHLH1,2:-0.892075983351;ZNF238:-0.92512313282;TAL1_TCF{3,4,12}:-0.930767038934;ATF2:-0.949615790923;POU6F1:-0.949922169675;SOX2:-0.95261668456;ZIC1..3:-0.964360236676;FOXO1,3,4:-0.973024181432;XBP1:-0.989318111656;POU5F1:-1.01350395746;MAZ:-1.03403136927;RREB1:-1.06610930211;MYFfamily:-1.10068880745;MTE{core}:-1.13926383654;PRDM1:-1.19161956402;MZF1:-1.26449697154;NFIX:-1.27399556276;PATZ1:-1.29202580971;SMAD1..7,9:-1.30411342839;TGIF1:-1.317275746;STAT1,3:-1.33149751431;TLX2:-1.39654741363;NANOG{mouse}:-1.48372951898;HMX1:-1.49442868737;SPZ1:-1.92865538494
|top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.96146599585;HES1:1.84384225587;FOXQ1:1.66176322348;E2F1..5:1.55200980964;ESRRA:1.53499155208;NR5A1,2:1.47317969871;FOXM1:1.33248571484;PPARG:1.28903526227;ELK1,4_GABP{A,B1}:1.14985498036;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.12141516455;YY1:0.966405704251;bHLH_family:0.90525608562;HIF1A:0.793611477784;NR6A1:0.731328064981;ZNF143:0.723984212349;NRF1:0.694462422964;NKX3-1:0.687817888892;HOX{A6,A7,B6,B7}:0.671680050668;PAX1,9:0.608212437306;NFY{A,B,C}:0.607625683924;ARID5B:0.605722042048;MYB:0.603798841982;HNF4A_NR2F1,2:0.603641451959;FOXD3:0.572239791365;EP300:0.570254141163;NKX3-2:0.566087567053;NFE2L1:0.517319889938;ZEB1:0.503380773948;FOXN1:0.501251400928;IKZF1:0.486099672952;SNAI1..3:0.480565199065;PAX8:0.442555167171;PAX5:0.419781480783;TEAD1:0.413124261386;TBX4,5:0.394545179742;ZBTB16:0.379855476449;IKZF2:0.348487852382;IRF7:0.334383380947;UFEwm:0.330735540867;GCM1,2:0.310746586525;CREB1:0.303561164357;MYOD1:0.288542164763;GFI1:0.287366834182;HOXA9_MEIS1:0.283194995053;POU3F1..4:0.27722421711;TP53:0.271931984563;POU1F1:0.254818363261;ZNF148:0.231439204032;PAX2:0.229016203645;GTF2A1,2:0.168445938065;FOX{F1,F2,J1}:0.161411556105;ALX4:0.141166932364;HOX{A5,B5}:0.135624093949;ATF5_CREB3:0.129572368824;RXR{A,B,G}:0.129156400885;HLF:0.117531451332;VSX1,2:0.102023649756;MYBL2:0.0878024435129;OCT4_SOX2{dimer}:0.082264312568;BACH2:0.0732428150258;HAND1,2:0.0652451279799;NFE2:0.0566242632324;NFE2L2:0.0515076757951;CDC5L:0.046026053031;RFX2..5_RFXANK_RFXAP:0.043710975854;LHX3,4:0.043459084862;TFDP1:0.0238898604659;PITX1..3:0.0144212979736;HSF1,2:0.000151200844005;TEF:-0.0125635194609;RORA:-0.0147838680369;GFI1B:-0.0166888647734;EN1,2:-0.022678903936;FOS_FOS{B,L1}_JUN{B,D}:-0.0353905763576;GLI1..3:-0.0429768651324;TBP:-0.0472501338611;HNF1A:-0.0515870385566;CDX1,2,4:-0.0559988469277;ZNF423:-0.0720903139421;LEF1_TCF7_TCF7L1,2:-0.0738189120308;ZNF384:-0.08064408537;MEF2{A,B,C,D}:-0.0816029923765;MTF1:-0.0937159680725;ONECUT1,2:-0.0946682462415;CUX2:-0.102133402107;ATF6:-0.103820695261;FOXP3:-0.105594818453;ESR1:-0.11252573196;SOX{8,9,10}:-0.113077041903;PRRX1,2:-0.122054486967;PAX4:-0.1701605415;NR1H4:-0.173833645188;ELF1,2,4:-0.175235391623;ZBTB6:-0.180563314551;SREBF1,2:-0.189970770244;HOX{A4,D4}:-0.19267373803;ALX1:-0.196152007748;STAT2,4,6:-0.196764024916;LMO2:-0.202857028532;NR3C1:-0.203928290053;NANOG:-0.206636546773;PDX1:-0.216783533633;PAX3,7:-0.221433109988;NFKB1_REL_RELA:-0.234176629356;BREu{core}:-0.241592240157;NKX2-2,8:-0.242129465505;CEBPA,B_DDIT3:-0.251954391005;GZF1:-0.252029271381;FOXL1:-0.252485312778;NKX6-1,2:-0.263143030021;TLX1..3_NFIC{dimer}:-0.268584696106;ATF4:-0.282537035876;FOSL2:-0.305401793647;PBX1:-0.311066535075;STAT5{A,B}:-0.31891577695;AHR_ARNT_ARNT2:-0.323460805926;MAFB:-0.332962477559;AIRE:-0.340016456215;JUN:-0.351017291324;IRF1,2:-0.366689393621;EBF1:-0.38429523301;KLF4:-0.386394764688;NKX2-1,4:-0.426565931132;RBPJ:-0.427912498759;HBP1_HMGB_SSRP1_UBTF:-0.434032933059;PAX6:-0.436829339293;HIC1:-0.443988275727;DBP:-0.44806147477;NFIL3:-0.457597120791;SPIB:-0.457616931664;TFCP2:-0.485137409159;HMGA1,2:-0.49035219223;FOX{I1,J2}:-0.49374604123;ADNP_IRX_SIX_ZHX:-0.495389824302;GTF2I:-0.49780035724;RFX1:-0.498099188569;GATA6:-0.522199475337;BPTF:-0.523671672949;ZFP161:-0.535013572383;FOXP1:-0.539884784904;POU2F1..3:-0.542534988271;EVI1:-0.551248337649;T:-0.557882473877;SRF:-0.558543733757;CRX:-0.564656077691;SPI1:-0.617237395864;RXRA_VDR{dimer}:-0.648424230498;TFAP2B:-0.671565266861;SP1:-0.68487934896;SOX5:-0.694825350379;TFAP2{A,C}:-0.698445384393;AR:-0.700779746523;RUNX1..3:-0.704022237358;SOX17:-0.704244634538;FOXA2:-0.711704665724;TOPORS:-0.722917982193;NFATC1..3:-0.746021275997;TFAP4:-0.760813703872;ETS1,2:-0.768828172319;MED-1{core}:-0.76937811795;EGR1..3:-0.820048342089;NKX2-3_NKX2-5:-0.822164366439;XCPE1{core}:-0.82301509056;GATA4:-0.834813646418;REST:-0.851408937131;FOX{D1,D2}:-0.853476936002;DMAP1_NCOR{1,2}_SMARC:-0.888532277693;NHLH1,2:-0.892075983351;ZNF238:-0.92512313282;TAL1_TCF{3,4,12}:-0.930767038934;ATF2:-0.949615790923;POU6F1:-0.949922169675;SOX2:-0.95261668456;ZIC1..3:-0.964360236676;FOXO1,3,4:-0.973024181432;XBP1:-0.989318111656;POU5F1:-1.01350395746;MAZ:-1.03403136927;RREB1:-1.06610930211;MYFfamily:-1.10068880745;MTE{core}:-1.13926383654;PRDM1:-1.19161956402;MZF1:-1.26449697154;NFIX:-1.27399556276;PATZ1:-1.29202580971;SMAD1..7,9:-1.30411342839;TGIF1:-1.317275746;STAT1,3:-1.33149751431;TLX2:-1.39654741363;NANOG{mouse}:-1.48372951898;HMX1:-1.49442868737;SPZ1:-1.92865538494
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11894-125E4;search_select_hide=table117:FF:11894-125E4
}}
}}

Latest revision as of 18:27, 4 June 2020

Name:Hep-2 cells treated with Streptococci strain JRS4, biol_rep1
Species:Human (Homo sapiens)
Library ID:CNhs13478
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age56
cell typeunclassifiable
cell lineHep-2
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2a
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005170
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13478 CAGE DRX007788 DRR008660
Accession ID Hg19

Library idBAMCTSS
CNhs13478 DRZ000085 DRZ001470
Accession ID Hg38

Library idBAMCTSS
CNhs13478 DRZ011435 DRZ012820
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0218
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0.787
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.452
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0424
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0.0549
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0229
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.218
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0085
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0735
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0697
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.104
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.777
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.28
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.0212
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.717
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0549
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-2.062684e-4
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.555
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.526
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0.187
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0451
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13478

Jaspar motifP-value
MA0002.20.222
MA0003.10.71
MA0004.10.0752
MA0006.10.636
MA0007.10.447
MA0009.10.396
MA0014.10.562
MA0017.10.266
MA0018.20.54
MA0019.10.684
MA0024.11.16985e-7
MA0025.10.0767
MA0027.10.704
MA0028.11.12474e-5
MA0029.10.308
MA0030.10.256
MA0031.10.17
MA0035.20.928
MA0038.10.74
MA0039.20.0336
MA0040.10.426
MA0041.10.441
MA0042.10.624
MA0043.10.251
MA0046.10.96
MA0047.20.936
MA0048.10.0366
MA0050.10.08
MA0051.10.786
MA0052.10.0287
MA0055.13.53118e-5
MA0057.10.233
MA0058.10.0245
MA0059.10.00597
MA0060.10.241
MA0061.10.446
MA0062.20.00839
MA0065.20.00749
MA0066.10.468
MA0067.10.6
MA0068.10.00175
MA0069.10.234
MA0070.10.726
MA0071.10.033
MA0072.10.613
MA0073.10.288
MA0074.10.393
MA0076.11.05532e-4
MA0077.10.942
MA0078.10.209
MA0079.20.343
MA0080.21.44105e-7
MA0081.10.376
MA0083.10.0281
MA0084.10.612
MA0087.10.368
MA0088.10.0457
MA0090.10.00308
MA0091.10.6
MA0092.10.616
MA0093.10.0521
MA0099.20.64
MA0100.10.53
MA0101.10.508
MA0102.20.656
MA0103.10.0132
MA0104.20.00151
MA0105.10.536
MA0106.10.511
MA0107.10.238
MA0108.20.373
MA0111.10.564
MA0112.20.00358
MA0113.10.73
MA0114.10.00512
MA0115.10.0925
MA0116.10.136
MA0117.10.793
MA0119.10.69
MA0122.10.988
MA0124.10.783
MA0125.10.337
MA0131.10.599
MA0135.10.984
MA0136.18.15887e-4
MA0137.20.04
MA0138.20.0866
MA0139.10.459
MA0140.10.663
MA0141.18.93392e-4
MA0142.10.867
MA0143.10.121
MA0144.10.499
MA0145.10.74
MA0146.10.108
MA0147.14.85518e-4
MA0148.10.232
MA0149.10.0427
MA0150.10.732
MA0152.10.646
MA0153.10.112
MA0154.10.972
MA0155.10.461
MA0156.10.116
MA0157.10.259
MA0159.10.0448
MA0160.10.0047
MA0162.10.0799
MA0163.10.00628
MA0164.10.402
MA0258.10.351
MA0259.10.0396



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13478

Novel motifP-value
10.0599
100.0498
1000.0156
1010.155
1020.74
1030.795
1040.923
1050.36
1060.126
1070.23
1080.728
1096.53345e-4
110.588
1100.189
1110.765
1120.659
1130.00327
1140.416
1150.804
1160.138
1170.0803
1180.0654
1190.307
120.832
1200.0608
1210.397
1220.187
1230.287
1240.605
1250.727
1260.53
1270.2
1280.00125
1290.548
135.28612e-5
1300.821
1310.433
1320.605
1330.233
1340.902
1350.0423
1360.00834
1370.317
1380.512
1390.144
140.654
1400.506
1410.279
1420.853
1430.346
1440.39
1450.369
1460.742
1470.567
1480.331
1490.4
150.584
1500.683
1510.665
1520.993
1530.704
1540.411
1550.351
1560.0874
1570.119
1580.19
1590.216
160.484
1600.255
1610.568
1620.623
1630.295
1640.0122
1650.619
1660.0667
1670.208
1680.434
1690.108
170.707
180.267
190.933
20.522
200.0562
210.123
220.855
230.00942
240.513
250.273
260.592
270.687
280.888
290.00484
30.965
300.291
310.639
320.31
330.132
340.235
350.954
360.0533
370.168
380.772
390.919
40.235
400.00381
410.161
420.802
430.688
440.0348
450.241
460.985
470.262
480.292
490.348
50.304
500.829
510.741
520.378
530.161
540.701
550.0387
560.907
570.431
580.99
590.788
60.581
600.671
610.0303
620.623
630.417
640.504
650.606
660.783
670.548
680.541
690.903
70.0174
700.642
710.0147
720.995
730.232
740.134
750.0615
760.126
770.361
780.0983
790.903
80.0566
800.0608
810.259
820.366
830.38
840.718
850.0314
860.977
870.0025
880.826
890.744
90.586
900.0349
910.0134
920.3
930.353
940.548
950.00316
960.535
970.785
980.733
990.398



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13478


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001737 (larynx)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000072 (segment of respiratory tract)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0001004 (respiratory system)
0001557 (upper respiratory tract)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000632 (group A streptococci treatment sample)
0104978 (HEp-2 cell sample)
0000639 (Streptococcus strain JRS4 treatment sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0011134 (human Hep-2 cells treated with Streptococci strain JRS4 sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

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