FF:11906-125F7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005907 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008192;DRR009064;DRZ000489;DRZ001874;DRZ011839;DRZ013224 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001 | |||
|comment=Changed from previous label. TODO: full classification | |comment=Changed from previous label. TODO: full classification | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor3.CNhs13512.11906-125F7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor3.CNhs13512.11906-125F7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor3.CNhs13512.11906-125F7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor3.CNhs13512.11906-125F7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor3.CNhs13512.11906-125F7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11906-125F7 | |id=FF:11906-125F7 | ||
|is_a=EFO:0002091;;FF:0000002;;FF:0000210 | |is_a=EFO:0002091;;FF:0000002;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs13512 | |||
|library_id_phase_based=2:CNhs13512 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11906 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11906 | |||
|name=CD4+CD25-CD45RA+ naive conventional T cells, donor3 | |name=CD4+CD25-CD45RA+ naive conventional T cells, donor3 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13512,LSID1025,release012,COMPLETED | |profile_hcage=CNhs13512,LSID1025,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0.310768747319633,0.494413345828749,0.905964936441996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640940245755704,0,0,0,0,0,0.212810851051576,0,0,0.483630840467978,0,0,0,0,0,0,0,0,0,0,0,0,0.539173623850791,0.568365355007786,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0632829884749903,0,0.519595069004235,0,0,0.392714696995636,0,0,0,0,0,0,0,0,0.310768747319633,0,0.714448876940803,0,0,0,0,0,0,0.163069727529764,0,0,0,0,0,-0.0123231037980502,-0.0592489295327205,0,0,0,-0.171208107067991,0.341318599016014,0,0,0,0,0.212733396081927,0.628009473439538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.437350812392678,0.604121158495901,0,0,0.310768747319633,0,0,0 | |||
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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=2.5186 | |rna_weight_ug=2.5186 | ||
|sample_age=23 | |sample_age=23 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.61858431684261e-210!GO:0043227;membrane-bound organelle;6.49467304726363e-187!GO:0043231;intracellular membrane-bound organelle;1.46301923497833e-186!GO:0043226;organelle;1.73708411747408e-175!GO:0043229;intracellular organelle;5.01999405650674e-175!GO:0005737;cytoplasm;2.75852222307522e-120!GO:0044422;organelle part;8.85301434146825e-108!GO:0044446;intracellular organelle part;2.93794842006714e-106!GO:0005634;nucleus;1.57324809962084e-102!GO:0044237;cellular metabolic process;2.69034199914237e-100!GO:0043170;macromolecule metabolic process;1.29410187587439e-99!GO:0044238;primary metabolic process;5.4065308475382e-96!GO:0032991;macromolecular complex;2.52001180128449e-86!GO:0030529;ribonucleoprotein complex;4.95547161575154e-86!GO:0003723;RNA binding;1.03404998107964e-83!GO:0044444;cytoplasmic part;9.76733811816237e-82!GO:0044428;nuclear part;3.42621075132325e-77!GO:0043283;biopolymer metabolic process;2.14594308099993e-69!GO:0043233;organelle lumen;5.33172105789449e-67!GO:0031974;membrane-enclosed lumen;5.33172105789449e-67!GO:0010467;gene expression;3.89744252100003e-64!GO:0006396;RNA processing;2.28802452391315e-58!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.10552389325127e-58!GO:0005739;mitochondrion;1.44658869924711e-54!GO:0006412;translation;1.38092971088204e-49!GO:0031981;nuclear lumen;1.93452168146735e-48!GO:0016071;mRNA metabolic process;6.14465659669571e-48!GO:0005840;ribosome;7.08393466568774e-48!GO:0019538;protein metabolic process;7.44143042220757e-47!GO:0003676;nucleic acid binding;1.76572445300292e-46!GO:0044267;cellular protein metabolic process;1.26862897976361e-45!GO:0044260;cellular macromolecule metabolic process;3.59741512386678e-45!GO:0033036;macromolecule localization;1.29802863089243e-43!GO:0005515;protein binding;5.75385057906019e-42!GO:0003735;structural constituent of ribosome;4.12747887468195e-41!GO:0015031;protein transport;4.14234368748544e-41!GO:0043234;protein complex;2.22054820666745e-40!GO:0006397;mRNA processing;2.73406779391201e-40!GO:0008380;RNA splicing;8.66847520833105e-40!GO:0008104;protein localization;2.61471927402177e-39!GO:0045184;establishment of protein localization;4.65606699972835e-39!GO:0044429;mitochondrial part;5.31585476153938e-38!GO:0033279;ribosomal subunit;1.91185333828465e-37!GO:0009059;macromolecule biosynthetic process;4.75306775412345e-37!GO:0016070;RNA metabolic process;1.69501991660774e-36!GO:0031090;organelle membrane;5.386743636814e-36!GO:0031967;organelle envelope;6.3824559695778e-36!GO:0031975;envelope;1.28022697288422e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.25206509525801e-32!GO:0005829;cytosol;1.47047322544642e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.14568035872295e-31!GO:0005654;nucleoplasm;2.33811673318266e-30!GO:0005681;spliceosome;4.16293910870992e-30!GO:0044249;cellular biosynthetic process;1.39709825376133e-29!GO:0046907;intracellular transport;1.91272654418279e-29!GO:0006886;intracellular protein transport;1.96797730606006e-29!GO:0006259;DNA metabolic process;1.93379071976352e-28!GO:0009058;biosynthetic process;9.38914056267609e-28!GO:0065003;macromolecular complex assembly;5.49678175430495e-27!GO:0016043;cellular component organization and biogenesis;2.10132019763733e-26!GO:0044445;cytosolic part;3.13374548011242e-26!GO:0006512;ubiquitin cycle;6.95598515364471e-25!GO:0044451;nucleoplasm part;2.2926537507217e-24!GO:0000166;nucleotide binding;6.1026241098663e-24!GO:0022607;cellular component assembly;8.20053061915066e-24!GO:0005740;mitochondrial envelope;2.99136510349811e-23!GO:0031966;mitochondrial membrane;1.46280094246883e-22!GO:0019866;organelle inner membrane;3.25462239570396e-22!GO:0006996;organelle organization and biogenesis;2.66814915666442e-21!GO:0016874;ligase activity;7.31933779948124e-21!GO:0005743;mitochondrial inner membrane;1.91612304104104e-20!GO:0022618;protein-RNA complex assembly;1.95275761316249e-20!GO:0051641;cellular localization;6.98594907037104e-20!GO:0015935;small ribosomal subunit;1.05249584674426e-19!GO:0051649;establishment of cellular localization;1.96139090571634e-19!GO:0005730;nucleolus;2.9041367437725e-19!GO:0043412;biopolymer modification;5.34494868266314e-19!GO:0015934;large ribosomal subunit;8.76733790353416e-19!GO:0006119;oxidative phosphorylation;1.83719080842247e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.14388182886392e-18!GO:0016462;pyrophosphatase activity;3.57285411504394e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;3.84230516629707e-18!GO:0016604;nuclear body;9.28564457405471e-18!GO:0017111;nucleoside-triphosphatase activity;9.28564457405471e-18!GO:0044265;cellular macromolecule catabolic process;9.36032050555167e-18!GO:0044455;mitochondrial membrane part;1.03684031553364e-17!GO:0006605;protein targeting;1.62594390209685e-17!GO:0008135;translation factor activity, nucleic acid binding;2.31181618239728e-17!GO:0031980;mitochondrial lumen;3.41755686767171e-17!GO:0005759;mitochondrial matrix;3.41755686767171e-17!GO:0043285;biopolymer catabolic process;2.12215357007777e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;3.36454311724511e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.77210800430738e-16!GO:0006464;protein modification process;5.75432269090984e-16!GO:0043228;non-membrane-bound organelle;7.06435231928956e-16!GO:0043232;intracellular non-membrane-bound organelle;7.06435231928956e-16!GO:0043687;post-translational protein modification;8.66637985175809e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.25083094729087e-15!GO:0019941;modification-dependent protein catabolic process;1.40808731778016e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.40808731778016e-15!GO:0006323;DNA packaging;1.63991924218033e-15!GO:0006913;nucleocytoplasmic transport;1.68031211915721e-15!GO:0006511;ubiquitin-dependent protein catabolic process;2.0522825366231e-15!GO:0044257;cellular protein catabolic process;2.23091895829609e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.29034258343237e-15!GO:0032553;ribonucleotide binding;2.29034258343237e-15!GO:0032555;purine ribonucleotide binding;2.29034258343237e-15!GO:0051169;nuclear transport;2.51082984916579e-15!GO:0016887;ATPase activity;3.06566135225701e-15!GO:0017076;purine nucleotide binding;4.76438392584491e-15!GO:0006457;protein folding;9.63290400996423e-15!GO:0042623;ATPase activity, coupled;1.00156113971205e-14!GO:0016607;nuclear speck;1.15573285020404e-14!GO:0008134;transcription factor binding;1.37450114945289e-14!GO:0009057;macromolecule catabolic process;1.73813482495504e-14!GO:0051276;chromosome organization and biogenesis;1.88949620938473e-14!GO:0005524;ATP binding;3.00190131990717e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;3.43163534637464e-14!GO:0000375;RNA splicing, via transesterification reactions;3.43163534637464e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.43163534637464e-14!GO:0005746;mitochondrial respiratory chain;3.65326609686276e-14!GO:0032559;adenyl ribonucleotide binding;7.02062624000386e-14!GO:0004386;helicase activity;7.78598240132042e-14!GO:0006413;translational initiation;1.62217697818229e-13!GO:0005635;nuclear envelope;1.9161356537464e-13!GO:0030554;adenyl nucleotide binding;1.92873878820318e-13!GO:0003743;translation initiation factor activity;2.1441651205667e-13!GO:0031965;nuclear membrane;3.04407950607099e-13!GO:0012505;endomembrane system;3.62757647031074e-13!GO:0012501;programmed cell death;5.81451280170213e-13!GO:0006915;apoptosis;8.10398246109498e-13!GO:0006974;response to DNA damage stimulus;1.04979000023298e-12!GO:0008219;cell death;1.58926893621741e-12!GO:0016265;death;1.58926893621741e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.87099582626099e-12!GO:0003954;NADH dehydrogenase activity;1.87099582626099e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.87099582626099e-12!GO:0044453;nuclear membrane part;2.1440335524075e-12!GO:0042254;ribosome biogenesis and assembly;2.63428385694183e-12!GO:0008026;ATP-dependent helicase activity;3.56601026783097e-12!GO:0016568;chromatin modification;3.68321073900558e-12!GO:0006403;RNA localization;4.35976001125422e-12!GO:0050657;nucleic acid transport;5.37294581546681e-12!GO:0051236;establishment of RNA localization;5.37294581546681e-12!GO:0050658;RNA transport;5.37294581546681e-12!GO:0000502;proteasome complex (sensu Eukaryota);5.51065920278106e-12!GO:0019222;regulation of metabolic process;6.32424306315105e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.12166089865618e-11!GO:0030163;protein catabolic process;1.13176001185011e-11!GO:0050794;regulation of cellular process;1.35078176064176e-11!GO:0005643;nuclear pore;1.49564830792289e-11!GO:0006446;regulation of translational initiation;1.68244585087024e-11!GO:0017038;protein import;2.20743696200394e-11!GO:0051082;unfolded protein binding;2.38786229162877e-11!GO:0044248;cellular catabolic process;3.02265030434162e-11!GO:0042775;organelle ATP synthesis coupled electron transport;3.55964708535261e-11!GO:0042773;ATP synthesis coupled electron transport;3.55964708535261e-11!GO:0006281;DNA repair;4.58598449899028e-11!GO:0008639;small protein conjugating enzyme activity;4.9995427165063e-11!GO:0004842;ubiquitin-protein ligase activity;6.6674981969624e-11!GO:0019787;small conjugating protein ligase activity;9.02555146887251e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.54686726551973e-11!GO:0045271;respiratory chain complex I;9.54686726551973e-11!GO:0005747;mitochondrial respiratory chain complex I;9.54686726551973e-11!GO:0005761;mitochondrial ribosome;1.18724855987481e-10!GO:0000313;organellar ribosome;1.18724855987481e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.87729472072593e-10!GO:0048193;Golgi vesicle transport;3.27318107149958e-10!GO:0031323;regulation of cellular metabolic process;3.29453641850164e-10!GO:0006399;tRNA metabolic process;3.65805334382278e-10!GO:0051028;mRNA transport;3.91399904059916e-10!GO:0065002;intracellular protein transport across a membrane;5.76996255022535e-10!GO:0008270;zinc ion binding;5.98879567279345e-10!GO:0006333;chromatin assembly or disassembly;6.03079021609359e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.80264250311848e-10!GO:0046930;pore complex;1.33391065744373e-09!GO:0006350;transcription;1.41160749948617e-09!GO:0051186;cofactor metabolic process;1.55068517510853e-09!GO:0065004;protein-DNA complex assembly;2.05219434075347e-09!GO:0003712;transcription cofactor activity;2.18676371444315e-09!GO:0009259;ribonucleotide metabolic process;3.01474736380035e-09!GO:0005694;chromosome;3.55115519556627e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.70496473205228e-09!GO:0042981;regulation of apoptosis;3.94688609120941e-09!GO:0016072;rRNA metabolic process;3.94941314856996e-09!GO:0043067;regulation of programmed cell death;5.17442730104526e-09!GO:0006364;rRNA processing;5.84134141853876e-09!GO:0009260;ribonucleotide biosynthetic process;6.56469662651139e-09!GO:0010468;regulation of gene expression;8.41809741885575e-09!GO:0016881;acid-amino acid ligase activity;1.05240332685842e-08!GO:0008565;protein transporter activity;1.05368791504743e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.75619343835106e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.75619343835106e-08!GO:0006164;purine nucleotide biosynthetic process;1.92982365541249e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.06182056595304e-08!GO:0016787;hydrolase activity;2.18707209337587e-08!GO:0007049;cell cycle;2.22455858723274e-08!GO:0006793;phosphorus metabolic process;2.22486229838979e-08!GO:0006796;phosphate metabolic process;2.22486229838979e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.44734458092078e-08!GO:0043566;structure-specific DNA binding;2.57113403677802e-08!GO:0048770;pigment granule;2.92444713686827e-08!GO:0042470;melanosome;2.92444713686827e-08!GO:0006163;purine nucleotide metabolic process;3.03676346012603e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.33337804899994e-08!GO:0019829;cation-transporting ATPase activity;3.49058555190772e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.89397271528163e-08!GO:0009150;purine ribonucleotide metabolic process;4.29803170593224e-08!GO:0044427;chromosomal part;6.02694049007476e-08!GO:0000151;ubiquitin ligase complex;1.06809220319854e-07!GO:0003713;transcription coactivator activity;1.111619446183e-07!GO:0000785;chromatin;1.11217733666495e-07!GO:0051170;nuclear import;1.37517962104373e-07!GO:0005794;Golgi apparatus;1.37517962104373e-07!GO:0050789;regulation of biological process;1.42737270687941e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.49840402760592e-07!GO:0009719;response to endogenous stimulus;1.70012068352751e-07!GO:0032774;RNA biosynthetic process;1.87954608998009e-07!GO:0016310;phosphorylation;1.88574297491645e-07!GO:0006606;protein import into nucleus;2.04282203043689e-07!GO:0046914;transition metal ion binding;2.1390308731218e-07!GO:0006351;transcription, DNA-dependent;2.14237813646436e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.43270767203353e-07!GO:0006732;coenzyme metabolic process;2.81094250806839e-07!GO:0032446;protein modification by small protein conjugation;2.90858325336237e-07!GO:0009060;aerobic respiration;3.52073529445747e-07!GO:0051726;regulation of cell cycle;4.52929307413108e-07!GO:0003697;single-stranded DNA binding;4.60756741732653e-07!GO:0051168;nuclear export;4.90138191715287e-07!GO:0045449;regulation of transcription;5.60036700782918e-07!GO:0016567;protein ubiquitination;6.52435425629026e-07!GO:0000074;regulation of progression through cell cycle;7.31754763863646e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.50713486987321e-07!GO:0015986;ATP synthesis coupled proton transport;7.66294915515458e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.66294915515458e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.77265093951786e-07!GO:0004812;aminoacyl-tRNA ligase activity;8.77265093951786e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.77265093951786e-07!GO:0006334;nucleosome assembly;9.74945114856432e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.13636828424648e-06!GO:0015399;primary active transmembrane transporter activity;1.13636828424648e-06!GO:0044432;endoplasmic reticulum part;1.25810924533121e-06!GO:0003724;RNA helicase activity;1.31284872076577e-06!GO:0031497;chromatin assembly;1.40326896936717e-06!GO:0043038;amino acid activation;1.86478345557985e-06!GO:0006418;tRNA aminoacylation for protein translation;1.86478345557985e-06!GO:0043039;tRNA aminoacylation;1.86478345557985e-06!GO:0004298;threonine endopeptidase activity;2.16080157751899e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.21838587171624e-06!GO:0016192;vesicle-mediated transport;2.32468034190472e-06!GO:0009141;nucleoside triphosphate metabolic process;2.50195731826369e-06!GO:0045333;cellular respiration;2.68493882403718e-06!GO:0000245;spliceosome assembly;2.78682600586492e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.82278540680201e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.82278540680201e-06!GO:0006754;ATP biosynthetic process;3.13604931090657e-06!GO:0006753;nucleoside phosphate metabolic process;3.13604931090657e-06!GO:0022402;cell cycle process;3.17036047799779e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.17570037206666e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.23082837214148e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.23082837214148e-06!GO:0046034;ATP metabolic process;3.43372011143726e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.47675685440072e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.57612494519071e-06!GO:0016563;transcription activator activity;3.62425739123648e-06!GO:0005768;endosome;3.87613000723977e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.14816236859485e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.14816236859485e-06!GO:0045259;proton-transporting ATP synthase complex;4.44545182320946e-06!GO:0016779;nucleotidyltransferase activity;4.86296985590782e-06!GO:0006401;RNA catabolic process;4.86296985590782e-06!GO:0006366;transcription from RNA polymerase II promoter;4.9068023855053e-06!GO:0051188;cofactor biosynthetic process;5.02999345476864e-06!GO:0007005;mitochondrion organization and biogenesis;5.73621090062317e-06!GO:0016740;transferase activity;5.97007514180555e-06!GO:0006888;ER to Golgi vesicle-mediated transport;6.16385835813074e-06!GO:0006355;regulation of transcription, DNA-dependent;6.29488552858039e-06!GO:0006916;anti-apoptosis;6.37015524810743e-06!GO:0005789;endoplasmic reticulum membrane;6.95855803731313e-06!GO:0009056;catabolic process;7.48142702074108e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.03499219404132e-06!GO:0051246;regulation of protein metabolic process;9.55841436787164e-06!GO:0003677;DNA binding;9.55870200426897e-06!GO:0019899;enzyme binding;9.91222723601106e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.09540522807664e-05!GO:0045786;negative regulation of progression through cell cycle;1.42000318637268e-05!GO:0006260;DNA replication;1.52664775666584e-05!GO:0006402;mRNA catabolic process;1.76632175386534e-05!GO:0009055;electron carrier activity;1.78981550250657e-05!GO:0043069;negative regulation of programmed cell death;1.87331414639237e-05!GO:0005783;endoplasmic reticulum;1.92831439603398e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;1.94440869943989e-05!GO:0016363;nuclear matrix;1.94692683643337e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.97354472629175e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.08145699424255e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.1805368213196e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.52730632472852e-05!GO:0008186;RNA-dependent ATPase activity;2.62620272359568e-05!GO:0043066;negative regulation of apoptosis;2.80455465805796e-05!GO:0006613;cotranslational protein targeting to membrane;2.90684898151571e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.08032213902325e-05!GO:0006099;tricarboxylic acid cycle;3.90033703828472e-05!GO:0046356;acetyl-CoA catabolic process;3.90033703828472e-05!GO:0043623;cellular protein complex assembly;3.96689791724296e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.0126553116547e-05!GO:0006084;acetyl-CoA metabolic process;4.65854463763143e-05!GO:0007243;protein kinase cascade;5.61142591715974e-05!GO:0030120;vesicle coat;7.11031534815223e-05!GO:0030662;coated vesicle membrane;7.11031534815223e-05!GO:0048523;negative regulation of cellular process;7.15289365917013e-05!GO:0006461;protein complex assembly;7.60806374509905e-05!GO:0009108;coenzyme biosynthetic process;8.02968343952802e-05!GO:0004004;ATP-dependent RNA helicase activity;8.95135322803277e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000100474040776942!GO:0008033;tRNA processing;0.000102406297887065!GO:0048475;coated membrane;0.000122378284548382!GO:0030117;membrane coat;0.000122378284548382!GO:0003690;double-stranded DNA binding;0.00012385717126071!GO:0006752;group transfer coenzyme metabolic process;0.000132168731614871!GO:0005793;ER-Golgi intermediate compartment;0.00013766374312111!GO:0016564;transcription repressor activity;0.000150976653730505!GO:0008234;cysteine-type peptidase activity;0.000188649059073533!GO:0009109;coenzyme catabolic process;0.000189211713512648!GO:0003729;mRNA binding;0.000234405334118544!GO:0060090;molecular adaptor activity;0.000237917068918317!GO:0031324;negative regulation of cellular metabolic process;0.00024127557165901!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000244342802096473!GO:0004674;protein serine/threonine kinase activity;0.00026367307669342!GO:0005762;mitochondrial large ribosomal subunit;0.000275189142333097!GO:0000315;organellar large ribosomal subunit;0.000275189142333097!GO:0006612;protein targeting to membrane;0.000280294028766284!GO:0044431;Golgi apparatus part;0.000287191508665993!GO:0009117;nucleotide metabolic process;0.000306377953822651!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000310345879531595!GO:0032259;methylation;0.000334309383032649!GO:0043021;ribonucleoprotein binding;0.000365119179537731!GO:0065009;regulation of a molecular function;0.000365342872546763!GO:0065007;biological regulation;0.000400394206279451!GO:0005885;Arp2/3 protein complex;0.000421104356693524!GO:0006891;intra-Golgi vesicle-mediated transport;0.000429359048542129!GO:0051187;cofactor catabolic process;0.000434600825118351!GO:0006611;protein export from nucleus;0.00046474023173933!GO:0006818;hydrogen transport;0.000467562937067315!GO:0005813;centrosome;0.000483760846516979!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000537224368984214!GO:0015992;proton transport;0.000543883879467404!GO:0043681;protein import into mitochondrion;0.000602573235419747!GO:0005769;early endosome;0.000675133420973688!GO:0043414;biopolymer methylation;0.000699936842106977!GO:0031072;heat shock protein binding;0.00072969413689487!GO:0016251;general RNA polymerase II transcription factor activity;0.000817025212178634!GO:0005667;transcription factor complex;0.000817025212178634!GO:0006405;RNA export from nucleus;0.00082022089405586!GO:0006310;DNA recombination;0.000861930570415976!GO:0048519;negative regulation of biological process;0.000871224244339633!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000892205112324142!GO:0000314;organellar small ribosomal subunit;0.000972326404127865!GO:0005763;mitochondrial small ribosomal subunit;0.000972326404127865!GO:0003899;DNA-directed RNA polymerase activity;0.00100386836945985!GO:0030384;phosphoinositide metabolic process;0.00100442224578114!GO:0016741;transferase activity, transferring one-carbon groups;0.00103694894126748!GO:0019843;rRNA binding;0.00104064675632526!GO:0006417;regulation of translation;0.00106255003767704!GO:0008168;methyltransferase activity;0.00119327975622765!GO:0004518;nuclease activity;0.00132301791195124!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00137944532325223!GO:0004527;exonuclease activity;0.00138805044032591!GO:0006917;induction of apoptosis;0.00140382824646441!GO:0044452;nucleolar part;0.00149255859739096!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00149821074758127!GO:0044440;endosomal part;0.00157113562496605!GO:0010008;endosome membrane;0.00157113562496605!GO:0009892;negative regulation of metabolic process;0.00157455354113364!GO:0008654;phospholipid biosynthetic process;0.00160472422745473!GO:0000786;nucleosome;0.00163912685453683!GO:0051427;hormone receptor binding;0.00179808940230873!GO:0005815;microtubule organizing center;0.00180458408898991!GO:0006607;NLS-bearing substrate import into nucleus;0.00181458290210804!GO:0012502;induction of programmed cell death;0.0018171769576628!GO:0006352;transcription initiation;0.00189070382917429!GO:0006650;glycerophospholipid metabolic process;0.00190545402371463!GO:0007006;mitochondrial membrane organization and biogenesis;0.00193463677324443!GO:0031326;regulation of cellular biosynthetic process;0.00193594444487339!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00210663891303586!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00210663891303586!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00210663891303586!GO:0006383;transcription from RNA polymerase III promoter;0.00226171382284779!GO:0006261;DNA-dependent DNA replication;0.00231534432015168!GO:0008632;apoptotic program;0.00235364700525642!GO:0005770;late endosome;0.00237102839390768!GO:0016197;endosome transport;0.00238143327446228!GO:0046489;phosphoinositide biosynthetic process;0.00265426550888643!GO:0051252;regulation of RNA metabolic process;0.00267979203044417!GO:0000139;Golgi membrane;0.00287144586847428!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00292583828314064!GO:0035257;nuclear hormone receptor binding;0.0031781470681433!GO:0006414;translational elongation;0.00326137552025925!GO:0016481;negative regulation of transcription;0.00326137552025925!GO:0051087;chaperone binding;0.00351550108770088!GO:0005684;U2-dependent spliceosome;0.00361438065061607!GO:0031625;ubiquitin protein ligase binding;0.00368756637669325!GO:0005525;GTP binding;0.00370100381633884!GO:0005070;SH3/SH2 adaptor activity;0.00397010464258796!GO:0009165;nucleotide biosynthetic process;0.00425915469013543!GO:0043065;positive regulation of apoptosis;0.0042668210158912!GO:0003746;translation elongation factor activity;0.00432500385889866!GO:0022890;inorganic cation transmembrane transporter activity;0.0043784021859681!GO:0009615;response to virus;0.00439396397681923!GO:0006289;nucleotide-excision repair;0.00443176053690834!GO:0051539;4 iron, 4 sulfur cluster binding;0.00461364922219595!GO:0005798;Golgi-associated vesicle;0.00483507427985835!GO:0003678;DNA helicase activity;0.00484415051059971!GO:0046474;glycerophospholipid biosynthetic process;0.00492317732553933!GO:0019783;small conjugating protein-specific protease activity;0.00499450664210028!GO:0006839;mitochondrial transport;0.00507288917172598!GO:0003924;GTPase activity;0.00511818610093932!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00537822942586811!GO:0048500;signal recognition particle;0.00539606780277032!GO:0051789;response to protein stimulus;0.00549931179189976!GO:0006986;response to unfolded protein;0.00549931179189976!GO:0016584;nucleosome positioning;0.00554548067813536!GO:0043068;positive regulation of programmed cell death;0.00559141984495747!GO:0008312;7S RNA binding;0.00572544225791531!GO:0005773;vacuole;0.00575396200989082!GO:0006338;chromatin remodeling;0.00575656161764561!GO:0019867;outer membrane;0.00594728456848078!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00617041855440702!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00617041855440702!GO:0004843;ubiquitin-specific protease activity;0.00668264532044338!GO:0043488;regulation of mRNA stability;0.00672522563562475!GO:0043487;regulation of RNA stability;0.00672522563562475!GO:0004532;exoribonuclease activity;0.00683041087137093!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00683041087137093!GO:0006626;protein targeting to mitochondrion;0.00700922642790336!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00701051841435158!GO:0045047;protein targeting to ER;0.00701051841435158!GO:0003711;transcription elongation regulator activity;0.0076035272278869!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00813981809871606!GO:0031968;organelle outer membrane;0.00835381968521224!GO:0051540;metal cluster binding;0.00866693550595312!GO:0051536;iron-sulfur cluster binding;0.00866693550595312!GO:0005741;mitochondrial outer membrane;0.0089222540489661!GO:0015980;energy derivation by oxidation of organic compounds;0.00929434754026203!GO:0009116;nucleoside metabolic process;0.00933719880265405!GO:0000323;lytic vacuole;0.00933719880265405!GO:0005764;lysosome;0.00933719880265405!GO:0003714;transcription corepressor activity;0.00938743250298416!GO:0047485;protein N-terminus binding;0.00956786106752256!GO:0000209;protein polyubiquitination;0.00961680585688578!GO:0009889;regulation of biosynthetic process;0.00965903312908937!GO:0042101;T cell receptor complex;0.00991013608595965!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00996991995137664!GO:0015002;heme-copper terminal oxidase activity;0.00996991995137664!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00996991995137664!GO:0004129;cytochrome-c oxidase activity;0.00996991995137664!GO:0004221;ubiquitin thiolesterase activity;0.0102221916665014!GO:0003684;damaged DNA binding;0.0102262114265488!GO:0040029;regulation of gene expression, epigenetic;0.0105105195037723!GO:0006497;protein amino acid lipidation;0.0105105195037723!GO:0031461;cullin-RING ubiquitin ligase complex;0.0105850133530588!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0108970599698778!GO:0016859;cis-trans isomerase activity;0.0108970599698778!GO:0007242;intracellular signaling cascade;0.0109001623295944!GO:0000059;protein import into nucleus, docking;0.0114067339117174!GO:0005774;vacuolar membrane;0.0114174935397322!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0114265415030919!GO:0030258;lipid modification;0.011562642600178!GO:0008408;3'-5' exonuclease activity;0.0119923300673472!GO:0030518;steroid hormone receptor signaling pathway;0.0122428378728204!GO:0005637;nuclear inner membrane;0.0125817200150769!GO:0003682;chromatin binding;0.013012030076983!GO:0016853;isomerase activity;0.0131743960994172!GO:0006595;polyamine metabolic process;0.0138443099441397!GO:0032200;telomere organization and biogenesis;0.0142533139194246!GO:0000723;telomere maintenance;0.0142533139194246!GO:0044438;microbody part;0.0143887337201168!GO:0044439;peroxisomal part;0.0143887337201168!GO:0005048;signal sequence binding;0.0144383494145839!GO:0006376;mRNA splice site selection;0.0147129374902381!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0147129374902381!GO:0045603;positive regulation of endothelial cell differentiation;0.0149546487582154!GO:0016585;chromatin remodeling complex;0.0150414978942458!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0153007180276585!GO:0008624;induction of apoptosis by extracellular signals;0.0159347374869738!GO:0009161;ribonucleoside monophosphate metabolic process;0.0160780052582251!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0160780052582251!GO:0033116;ER-Golgi intermediate compartment membrane;0.016086792011763!GO:0006914;autophagy;0.0161230600358727!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0162505830459726!GO:0005669;transcription factor TFIID complex;0.0164421294729983!GO:0016570;histone modification;0.0166831127343637!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0167153683723256!GO:0010257;NADH dehydrogenase complex assembly;0.0167153683723256!GO:0033108;mitochondrial respiratory chain complex assembly;0.0167153683723256!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0168566183580054!GO:0008213;protein amino acid alkylation;0.0168680264710105!GO:0006479;protein amino acid methylation;0.0168680264710105!GO:0042110;T cell activation;0.0171789880237564!GO:0009112;nucleobase metabolic process;0.0176849989840377!GO:0050852;T cell receptor signaling pathway;0.0179694097521784!GO:0016569;covalent chromatin modification;0.0180116432461151!GO:0000278;mitotic cell cycle;0.0184634117202848!GO:0003725;double-stranded RNA binding;0.0193243934010366!GO:0044437;vacuolar part;0.0196500351451223!GO:0022415;viral reproductive process;0.0197066144583187!GO:0005521;lamin binding;0.019888918656699!GO:0000049;tRNA binding;0.0207252506642965!GO:0016272;prefoldin complex;0.0208694355944721!GO:0019901;protein kinase binding;0.0212710973773788!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0212710973773788!GO:0030658;transport vesicle membrane;0.0212710973773788!GO:0016788;hydrolase activity, acting on ester bonds;0.0217764712726869!GO:0030522;intracellular receptor-mediated signaling pathway;0.0228182099370525!GO:0048487;beta-tubulin binding;0.0228182099370525!GO:0032561;guanyl ribonucleotide binding;0.0229934236597807!GO:0019001;guanyl nucleotide binding;0.0229934236597807!GO:0046966;thyroid hormone receptor binding;0.023122647852067!GO:0007004;telomere maintenance via telomerase;0.0238634219102948!GO:0030137;COPI-coated vesicle;0.0239757607241011!GO:0006013;mannose metabolic process;0.0240093705035222!GO:0030118;clathrin coat;0.024202736962808!GO:0046822;regulation of nucleocytoplasmic transport;0.0243648442924691!GO:0030880;RNA polymerase complex;0.0244526618566946!GO:0008276;protein methyltransferase activity;0.0244759176693522!GO:0016790;thiolester hydrolase activity;0.0245561364803102!GO:0016763;transferase activity, transferring pentosyl groups;0.024689441419952!GO:0008017;microtubule binding;0.0247464999032324!GO:0030521;androgen receptor signaling pathway;0.0247472427817139!GO:0051251;positive regulation of lymphocyte activation;0.024970394273387!GO:0000738;DNA catabolic process, exonucleolytic;0.0253760666255703!GO:0005765;lysosomal membrane;0.0253769711075765!GO:0042158;lipoprotein biosynthetic process;0.0253769711075765!GO:0022406;membrane docking;0.0256346443329054!GO:0048278;vesicle docking;0.0256346443329054!GO:0006302;double-strand break repair;0.0256346443329054!GO:0031903;microbody membrane;0.0256346443329054!GO:0005778;peroxisomal membrane;0.0256346443329054!GO:0015631;tubulin binding;0.0257502881966431!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.025962067764095!GO:0008022;protein C-terminus binding;0.0266896387770301!GO:0019900;kinase binding;0.0269319430363826!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0272289344911138!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0275821331239664!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0283923179328672!GO:0008097;5S rRNA binding;0.0288499709829289!GO:0031124;mRNA 3'-end processing;0.0289965866774874!GO:0008139;nuclear localization sequence binding;0.0290313877177272!GO:0000287;magnesium ion binding;0.0292344890347635!GO:0005869;dynactin complex;0.0295063467050986!GO:0045947;negative regulation of translational initiation;0.029537087386259!GO:0043022;ribosome binding;0.029634445666709!GO:0016301;kinase activity;0.029812004702355!GO:0006406;mRNA export from nucleus;0.0298526438884409!GO:0000118;histone deacetylase complex;0.030236309672764!GO:0001772;immunological synapse;0.0306323206413153!GO:0006904;vesicle docking during exocytosis;0.0307225345583989!GO:0030663;COPI coated vesicle membrane;0.0307225345583989!GO:0030126;COPI vesicle coat;0.0307225345583989!GO:0050790;regulation of catalytic activity;0.0307609770174608!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.030968338104672!GO:0048471;perinuclear region of cytoplasm;0.0312295108535584!GO:0006506;GPI anchor biosynthetic process;0.031386747672956!GO:0009451;RNA modification;0.0316422624194984!GO:0045892;negative regulation of transcription, DNA-dependent;0.031718378888918!GO:0004197;cysteine-type endopeptidase activity;0.0319080688909748!GO:0051920;peroxiredoxin activity;0.0319080688909748!GO:0050870;positive regulation of T cell activation;0.0319080688909748!GO:0042608;T cell receptor binding;0.0321511924467862!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0321511924467862!GO:0046426;negative regulation of JAK-STAT cascade;0.0324232522714233!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0326452065180108!GO:0015923;mannosidase activity;0.0332126466041657!GO:0008287;protein serine/threonine phosphatase complex;0.0333655786425986!GO:0000119;mediator complex;0.0333655786425986!GO:0000178;exosome (RNase complex);0.0342487534930267!GO:0051052;regulation of DNA metabolic process;0.0354261355265075!GO:0001667;ameboidal cell migration;0.0360602519860222!GO:0032027;myosin light chain binding;0.0360602519860222!GO:0031123;RNA 3'-end processing;0.0369615094143367!GO:0006730;one-carbon compound metabolic process;0.0369788094431407!GO:0030660;Golgi-associated vesicle membrane;0.0374532232784479!GO:0004177;aminopeptidase activity;0.0375988485145119!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0375988485145119!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0375988485145119!GO:0009126;purine nucleoside monophosphate metabolic process;0.0375988485145119!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0375988485145119!GO:0007050;cell cycle arrest;0.037760159492465!GO:0031647;regulation of protein stability;0.0387081528766888!GO:0006505;GPI anchor metabolic process;0.0387741246793429!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0390254647295196!GO:0000428;DNA-directed RNA polymerase complex;0.0390254647295196!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0396411306185897!GO:0043621;protein self-association;0.0403734828469277!GO:0030132;clathrin coat of coated pit;0.0416096161594222!GO:0000175;3'-5'-exoribonuclease activity;0.0420417993197441!GO:0005832;chaperonin-containing T-complex;0.0429349761337192!GO:0050811;GABA receptor binding;0.0434425307968348!GO:0000090;mitotic anaphase;0.044152781659613!GO:0051322;anaphase;0.044152781659613!GO:0008320;protein transmembrane transporter activity;0.0446679090325063!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0450102456301908!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0450102456301908!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0450102456301908!GO:0000123;histone acetyltransferase complex;0.0452278162040395!GO:0005777;peroxisome;0.0454321100251089!GO:0042579;microbody;0.0454321100251089!GO:0007265;Ras protein signal transduction;0.0455240179617938!GO:0045309;protein phosphorylated amino acid binding;0.0455240179617938!GO:0006465;signal peptide processing;0.0462375532376512!GO:0016791;phosphoric monoester hydrolase activity;0.0480255188435391!GO:0046854;phosphoinositide phosphorylation;0.0481067111143207!GO:0046979;TAP2 binding;0.0488135371323815!GO:0046977;TAP binding;0.0488135371323815!GO:0046978;TAP1 binding;0.0488135371323815!GO:0051092;activation of NF-kappaB transcription factor;0.0488135371323815!GO:0004576;oligosaccharyl transferase activity;0.0488135371323815!GO:0006308;DNA catabolic process;0.0488135371323815!GO:0046834;lipid phosphorylation;0.0498315427321584!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0498315427321584!GO:0005083;small GTPase regulator activity;0.0498437894242262 | |||
|sample_id=11906 | |sample_id=11906 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=PDX1:2.76983119066;CDX1,2,4:2.45063693218;FOX{D1,D2}:2.43424202459;CREB1:2.36663663806;PAX3,7:2.36534311548;BPTF:2.02514076398;RUNX1..3:1.93018899916;ELF1,2,4:1.8845963436;RFX2..5_RFXANK_RFXAP:1.79682311583;ZBTB16:1.67538683272;HMX1:1.56699647459;LEF1_TCF7_TCF7L1,2:1.4993469272;ETS1,2:1.48308707497;TLX2:1.45524222209;FOXO1,3,4:1.43748513467;ATF5_CREB3:1.41564124926;DMAP1_NCOR{1,2}_SMARC:1.39535332567;ATF4:1.37441493425;IKZF2:1.34896854236;SPZ1:1.32133833743;FOX{F1,F2,J1}:1.23751201043;BREu{core}:1.2165495279;RFX1:1.16796615234;NKX6-1,2:1.16295152855;PBX1:1.14245457585;PAX6:1.11920492211;FOXN1:1.08161716315;AHR_ARNT_ARNT2:0.948594859614;PITX1..3:0.92589330193;SPI1:0.905037001171;RORA:0.859227965338;FOXP1:0.850052975304;ELK1,4_GABP{A,B1}:0.793578760013;ZEB1:0.793267417511;GATA6:0.782267636059;IRF1,2:0.740333047867;HIF1A:0.718360491024;JUN:0.708760624345;AIRE:0.680804535618;ATF2:0.676190331462;TGIF1:0.640135228854;NKX2-1,4:0.601657515813;SPIB:0.581798637835;YY1:0.565690542829;T:0.558465926805;HOX{A6,A7,B6,B7}:0.534318941021;PAX2:0.524780440775;SOX5:0.491194891238;SNAI1..3:0.486762089128;CRX:0.459128453076;NR5A1,2:0.385123632297;FOXD3:0.369053840929;CUX2:0.351773138976;ATF6:0.339383836995;TOPORS:0.328287944752;FOX{I1,J2}:0.313117313726;IRF7:0.300395828325;STAT1,3:0.284096900104;LMO2:0.268094144498;MYOD1:0.24419445992;NFIX:0.230030679269;POU1F1:0.214580306569;POU2F1..3:0.213847097084;SOX2:0.2078862489;NFE2L1:0.181230981192;NANOG:0.130404309989;PAX4:0.112938894864;NFIL3:0.109775925428;STAT5{A,B}:0.0582637954313;MAFB:0.0550203729799;VSX1,2:0.0346669697907;FOXA2:0.0128700998793;HBP1_HMGB_SSRP1_UBTF:0.00508231370969;EVI1:0.000779045542529;NRF1:-0.00566150081124;DBP:-0.0206430914301;NFKB1_REL_RELA:-0.0219271252322;SMAD1..7,9:-0.0773310055236;MYB:-0.0780571269038;TAL1_TCF{3,4,12}:-0.085093827802;ALX1:-0.0894148206276;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.105593661082;HOXA9_MEIS1:-0.127721290995;EP300:-0.142391221217;NKX3-1:-0.16327243099;FOXQ1:-0.166772021989;POU6F1:-0.186079364325;SREBF1,2:-0.222335510474;HAND1,2:-0.227674446982;OCT4_SOX2{dimer}:-0.279700475108;HNF1A:-0.280399630153;NR6A1:-0.303270003689;FOXL1:-0.31484822803;PPARG:-0.360015754562;HNF4A_NR2F1,2:-0.377852586738;MYFfamily:-0.385176512278;GLI1..3:-0.428867219465;RREB1:-0.434409375058;PRRX1,2:-0.459236341253;HES1:-0.467391645549;NANOG{mouse}:-0.475438614843;NFATC1..3:-0.520216600663;ADNP_IRX_SIX_ZHX:-0.539845640539;ZNF143:-0.545108694322;GFI1B:-0.557150826436;TBX4,5:-0.585430850266;E2F1..5:-0.604321804689;MEF2{A,B,C,D}:-0.606161753251;NFY{A,B,C}:-0.607475120454;NHLH1,2:-0.610009590798;EGR1..3:-0.626824833865;AR:-0.633661116478;POU3F1..4:-0.636847295766;STAT2,4,6:-0.657744353514;CEBPA,B_DDIT3:-0.707117771582;FOSL2:-0.723287612922;HMGA1,2:-0.760148907526;RBPJ:-0.760434456615;MED-1{core}:-0.772771903356;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.774277926537;FOS_FOS{B,L1}_JUN{B,D}:-0.779753465676;HLF:-0.793086848352;REST:-0.800607504973;NKX2-2,8:-0.811845649878;BACH2:-0.813108884315;ZNF384:-0.818640551395;PAX5:-0.857279186646;MZF1:-0.867339674129;RXRA_VDR{dimer}:-0.86819095641;GFI1:-0.898773899162;SOX{8,9,10}:-0.900961398372;ALX4:-0.903836353208;FOXP3:-0.934705150632;ZNF148:-0.935239492787;NKX2-3_NKX2-5:-0.93879959702;RXR{A,B,G}:-0.967814569823;FOXM1:-0.972130328903;NFE2:-0.989262641727;ZNF423:-1.00074555227;UFEwm:-1.00274236141;LHX3,4:-1.02265190817;ZFP161:-1.05760399668;GCM1,2:-1.09087092225;SRF:-1.11270835126;ZBTB6:-1.11289235434;HOX{A5,B5}:-1.11330811385;MTE{core}:-1.14316601717;ONECUT1,2:-1.15185224621;ZNF238:-1.15198940713;ARID5B:-1.15288688976;CDC5L:-1.15342182518;KLF4:-1.15582231787;SOX17:-1.1648264878;TP53:-1.18321771429;bHLH_family:-1.18894276992;GATA4:-1.19373790479;NR1H4:-1.19410011134;MTF1:-1.22807142914;TFAP4:-1.25085117234;GZF1:-1.26415579596;PRDM1:-1.32817673099;EN1,2:-1.3607079086;PATZ1:-1.37675020343;MYBL2:-1.38253450021;NR3C1:-1.41076600843;TFCP2:-1.46530374141;NFE2L2:-1.47678779628;XBP1:-1.48885557367;HIC1:-1.50494781819;HOX{A4,D4}:-1.51927630408;POU5F1:-1.53474597365;PAX8:-1.55740590447;ESR1:-1.59189366314;TEAD1:-1.59692714746;TEF:-1.60144125148;GTF2I:-1.61529430644;MAZ:-1.62762041486;EBF1:-1.64492101552;GTF2A1,2:-1.64987282384;XCPE1{core}:-1.67235933483;NKX3-2:-1.69348289463;TLX1..3_NFIC{dimer}:-1.71438104099;TFAP2B:-1.76128108733;ZIC1..3:-1.80909488298;ESRRA:-1.81368153932;TFDP1:-1.9199593927;PAX1,9:-1.95910249057;TBP:-1.97537542152;SP1:-2.02738623085;TFAP2{A,C}:-2.07571116447;HSF1,2:-2.64570675183;IKZF1:-2.75319095604 | |top_motifs=PDX1:2.76983119066;CDX1,2,4:2.45063693218;FOX{D1,D2}:2.43424202459;CREB1:2.36663663806;PAX3,7:2.36534311548;BPTF:2.02514076398;RUNX1..3:1.93018899916;ELF1,2,4:1.8845963436;RFX2..5_RFXANK_RFXAP:1.79682311583;ZBTB16:1.67538683272;HMX1:1.56699647459;LEF1_TCF7_TCF7L1,2:1.4993469272;ETS1,2:1.48308707497;TLX2:1.45524222209;FOXO1,3,4:1.43748513467;ATF5_CREB3:1.41564124926;DMAP1_NCOR{1,2}_SMARC:1.39535332567;ATF4:1.37441493425;IKZF2:1.34896854236;SPZ1:1.32133833743;FOX{F1,F2,J1}:1.23751201043;BREu{core}:1.2165495279;RFX1:1.16796615234;NKX6-1,2:1.16295152855;PBX1:1.14245457585;PAX6:1.11920492211;FOXN1:1.08161716315;AHR_ARNT_ARNT2:0.948594859614;PITX1..3:0.92589330193;SPI1:0.905037001171;RORA:0.859227965338;FOXP1:0.850052975304;ELK1,4_GABP{A,B1}:0.793578760013;ZEB1:0.793267417511;GATA6:0.782267636059;IRF1,2:0.740333047867;HIF1A:0.718360491024;JUN:0.708760624345;AIRE:0.680804535618;ATF2:0.676190331462;TGIF1:0.640135228854;NKX2-1,4:0.601657515813;SPIB:0.581798637835;YY1:0.565690542829;T:0.558465926805;HOX{A6,A7,B6,B7}:0.534318941021;PAX2:0.524780440775;SOX5:0.491194891238;SNAI1..3:0.486762089128;CRX:0.459128453076;NR5A1,2:0.385123632297;FOXD3:0.369053840929;CUX2:0.351773138976;ATF6:0.339383836995;TOPORS:0.328287944752;FOX{I1,J2}:0.313117313726;IRF7:0.300395828325;STAT1,3:0.284096900104;LMO2:0.268094144498;MYOD1:0.24419445992;NFIX:0.230030679269;POU1F1:0.214580306569;POU2F1..3:0.213847097084;SOX2:0.2078862489;NFE2L1:0.181230981192;NANOG:0.130404309989;PAX4:0.112938894864;NFIL3:0.109775925428;STAT5{A,B}:0.0582637954313;MAFB:0.0550203729799;VSX1,2:0.0346669697907;FOXA2:0.0128700998793;HBP1_HMGB_SSRP1_UBTF:0.00508231370969;EVI1:0.000779045542529;NRF1:-0.00566150081124;DBP:-0.0206430914301;NFKB1_REL_RELA:-0.0219271252322;SMAD1..7,9:-0.0773310055236;MYB:-0.0780571269038;TAL1_TCF{3,4,12}:-0.085093827802;ALX1:-0.0894148206276;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.105593661082;HOXA9_MEIS1:-0.127721290995;EP300:-0.142391221217;NKX3-1:-0.16327243099;FOXQ1:-0.166772021989;POU6F1:-0.186079364325;SREBF1,2:-0.222335510474;HAND1,2:-0.227674446982;OCT4_SOX2{dimer}:-0.279700475108;HNF1A:-0.280399630153;NR6A1:-0.303270003689;FOXL1:-0.31484822803;PPARG:-0.360015754562;HNF4A_NR2F1,2:-0.377852586738;MYFfamily:-0.385176512278;GLI1..3:-0.428867219465;RREB1:-0.434409375058;PRRX1,2:-0.459236341253;HES1:-0.467391645549;NANOG{mouse}:-0.475438614843;NFATC1..3:-0.520216600663;ADNP_IRX_SIX_ZHX:-0.539845640539;ZNF143:-0.545108694322;GFI1B:-0.557150826436;TBX4,5:-0.585430850266;E2F1..5:-0.604321804689;MEF2{A,B,C,D}:-0.606161753251;NFY{A,B,C}:-0.607475120454;NHLH1,2:-0.610009590798;EGR1..3:-0.626824833865;AR:-0.633661116478;POU3F1..4:-0.636847295766;STAT2,4,6:-0.657744353514;CEBPA,B_DDIT3:-0.707117771582;FOSL2:-0.723287612922;HMGA1,2:-0.760148907526;RBPJ:-0.760434456615;MED-1{core}:-0.772771903356;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.774277926537;FOS_FOS{B,L1}_JUN{B,D}:-0.779753465676;HLF:-0.793086848352;REST:-0.800607504973;NKX2-2,8:-0.811845649878;BACH2:-0.813108884315;ZNF384:-0.818640551395;PAX5:-0.857279186646;MZF1:-0.867339674129;RXRA_VDR{dimer}:-0.86819095641;GFI1:-0.898773899162;SOX{8,9,10}:-0.900961398372;ALX4:-0.903836353208;FOXP3:-0.934705150632;ZNF148:-0.935239492787;NKX2-3_NKX2-5:-0.93879959702;RXR{A,B,G}:-0.967814569823;FOXM1:-0.972130328903;NFE2:-0.989262641727;ZNF423:-1.00074555227;UFEwm:-1.00274236141;LHX3,4:-1.02265190817;ZFP161:-1.05760399668;GCM1,2:-1.09087092225;SRF:-1.11270835126;ZBTB6:-1.11289235434;HOX{A5,B5}:-1.11330811385;MTE{core}:-1.14316601717;ONECUT1,2:-1.15185224621;ZNF238:-1.15198940713;ARID5B:-1.15288688976;CDC5L:-1.15342182518;KLF4:-1.15582231787;SOX17:-1.1648264878;TP53:-1.18321771429;bHLH_family:-1.18894276992;GATA4:-1.19373790479;NR1H4:-1.19410011134;MTF1:-1.22807142914;TFAP4:-1.25085117234;GZF1:-1.26415579596;PRDM1:-1.32817673099;EN1,2:-1.3607079086;PATZ1:-1.37675020343;MYBL2:-1.38253450021;NR3C1:-1.41076600843;TFCP2:-1.46530374141;NFE2L2:-1.47678779628;XBP1:-1.48885557367;HIC1:-1.50494781819;HOX{A4,D4}:-1.51927630408;POU5F1:-1.53474597365;PAX8:-1.55740590447;ESR1:-1.59189366314;TEAD1:-1.59692714746;TEF:-1.60144125148;GTF2I:-1.61529430644;MAZ:-1.62762041486;EBF1:-1.64492101552;GTF2A1,2:-1.64987282384;XCPE1{core}:-1.67235933483;NKX3-2:-1.69348289463;TLX1..3_NFIC{dimer}:-1.71438104099;TFAP2B:-1.76128108733;ZIC1..3:-1.80909488298;ESRRA:-1.81368153932;TFDP1:-1.9199593927;PAX1,9:-1.95910249057;TBP:-1.97537542152;SP1:-2.02738623085;TFAP2{A,C}:-2.07571116447;HSF1,2:-2.64570675183;IKZF1:-2.75319095604 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11906-125F7;search_select_hide=table117:FF:11906-125F7 | |||
}} | }} | ||
Latest revision as of 18:28, 4 June 2020
| Name: | CD4+CD25-CD45RA+ naive conventional T cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13512 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13512
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13512
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.19 |
| 10 | 10 | 0.00785 |
| 100 | 100 | 0.47 |
| 101 | 101 | 0.12 |
| 102 | 102 | 0.702 |
| 103 | 103 | 0.31 |
| 104 | 104 | 0.736 |
| 105 | 105 | 0.701 |
| 106 | 106 | 0.591 |
| 107 | 107 | 0.0635 |
| 108 | 108 | 0.975 |
| 109 | 109 | 0.164 |
| 11 | 11 | 0.148 |
| 110 | 110 | 0.743 |
| 111 | 111 | 0.316 |
| 112 | 112 | 0.612 |
| 113 | 113 | 0.181 |
| 114 | 114 | 0.189 |
| 115 | 115 | 0.227 |
| 116 | 116 | 0.794 |
| 117 | 117 | 0.00114 |
| 118 | 118 | 0.248 |
| 119 | 119 | 0.637 |
| 12 | 12 | 0.779 |
| 120 | 120 | 0.733 |
| 121 | 121 | 0.829 |
| 122 | 122 | 0.734 |
| 123 | 123 | 7.48709e-6 |
| 124 | 124 | 0.524 |
| 125 | 125 | 0.769 |
| 126 | 126 | 0.96 |
| 127 | 127 | 0.85 |
| 128 | 128 | 0.919 |
| 129 | 129 | 0.421 |
| 13 | 13 | 0.48 |
| 130 | 130 | 0.315 |
| 131 | 131 | 0.236 |
| 132 | 132 | 0.951 |
| 133 | 133 | 0.446 |
| 134 | 134 | 0.572 |
| 135 | 135 | 0.789 |
| 136 | 136 | 0.663 |
| 137 | 137 | 0.0475 |
| 138 | 138 | 0.291 |
| 139 | 139 | 0.0268 |
| 14 | 14 | 0.512 |
| 140 | 140 | 0.0262 |
| 141 | 141 | 0.433 |
| 142 | 142 | 0.397 |
| 143 | 143 | 0.0152 |
| 144 | 144 | 0.737 |
| 145 | 145 | 0.605 |
| 146 | 146 | 0.436 |
| 147 | 147 | 0.0568 |
| 148 | 148 | 0.087 |
| 149 | 149 | 0.708 |
| 15 | 15 | 0.185 |
| 150 | 150 | 0.76 |
| 151 | 151 | 0.439 |
| 152 | 152 | 0.169 |
| 153 | 153 | 0.708 |
| 154 | 154 | 0.336 |
| 155 | 155 | 0.0415 |
| 156 | 156 | 0.992 |
| 157 | 157 | 0.887 |
| 158 | 158 | 0.00356 |
| 159 | 159 | 0.872 |
| 16 | 16 | 0.594 |
| 160 | 160 | 0.828 |
| 161 | 161 | 0.387 |
| 162 | 162 | 0.314 |
| 163 | 163 | 0.61 |
| 164 | 164 | 0.0404 |
| 165 | 165 | 0.789 |
| 166 | 166 | 0.75 |
| 167 | 167 | 0.0473 |
| 168 | 168 | 0.92 |
| 169 | 169 | 0.835 |
| 17 | 17 | 0.826 |
| 18 | 18 | 0.931 |
| 19 | 19 | 0.204 |
| 2 | 2 | 0.545 |
| 20 | 20 | 0.488 |
| 21 | 21 | 0.341 |
| 22 | 22 | 0.576 |
| 23 | 23 | 0.533 |
| 24 | 24 | 0.596 |
| 25 | 25 | 0.124 |
| 26 | 26 | 0.45 |
| 27 | 27 | 0.349 |
| 28 | 28 | 0.69 |
| 29 | 29 | 0.0248 |
| 3 | 3 | 0.13 |
| 30 | 30 | 0.0962 |
| 31 | 31 | 0.777 |
| 32 | 32 | 0.111 |
| 33 | 33 | 0.269 |
| 34 | 34 | 0.423 |
| 35 | 35 | 0.0323 |
| 36 | 36 | 0.0211 |
| 37 | 37 | 0.306 |
| 38 | 38 | 0.919 |
| 39 | 39 | 0.229 |
| 4 | 4 | 0.776 |
| 40 | 40 | 0.71 |
| 41 | 41 | 0.229 |
| 42 | 42 | 0.113 |
| 43 | 43 | 0.289 |
| 44 | 44 | 0.72 |
| 45 | 45 | 0.38 |
| 46 | 46 | 0.255 |
| 47 | 47 | 0.0919 |
| 48 | 48 | 0.267 |
| 49 | 49 | 0.0404 |
| 5 | 5 | 0.452 |
| 50 | 50 | 0.483 |
| 51 | 51 | 0.691 |
| 52 | 52 | 0.443 |
| 53 | 53 | 0.4 |
| 54 | 54 | 0.931 |
| 55 | 55 | 0.222 |
| 56 | 56 | 0.722 |
| 57 | 57 | 0.389 |
| 58 | 58 | 0.117 |
| 59 | 59 | 0.773 |
| 6 | 6 | 0.838 |
| 60 | 60 | 0.517 |
| 61 | 61 | 0.0796 |
| 62 | 62 | 0.0646 |
| 63 | 63 | 0.703 |
| 64 | 64 | 0.318 |
| 65 | 65 | 0.982 |
| 66 | 66 | 0.594 |
| 67 | 67 | 0.857 |
| 68 | 68 | 0.541 |
| 69 | 69 | 0.977 |
| 7 | 7 | 0.378 |
| 70 | 70 | 0.00934 |
| 71 | 71 | 0.0482 |
| 72 | 72 | 0.183 |
| 73 | 73 | 0.855 |
| 74 | 74 | 0.41 |
| 75 | 75 | 0.00547 |
| 76 | 76 | 0.113 |
| 77 | 77 | 0.0807 |
| 78 | 78 | 0.372 |
| 79 | 79 | 0.821 |
| 8 | 8 | 0.722 |
| 80 | 80 | 0.0447 |
| 81 | 81 | 0.174 |
| 82 | 82 | 0.191 |
| 83 | 83 | 0.651 |
| 84 | 84 | 0.557 |
| 85 | 85 | 0.688 |
| 86 | 86 | 0.228 |
| 87 | 87 | 0.479 |
| 88 | 88 | 0.891 |
| 89 | 89 | 0.241 |
| 9 | 9 | 0.788 |
| 90 | 90 | 0.00721 |
| 91 | 91 | 0.384 |
| 92 | 92 | 0.393 |
| 93 | 93 | 0.468 |
| 94 | 94 | 0.152 |
| 95 | 95 | 0.422 |
| 96 | 96 | 0.349 |
| 97 | 97 | 0.443 |
| 98 | 98 | 0.0611 |
| 99 | 99 | 0.00278 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13512
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
