FF:12179-129A1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=RNA-Seq@SAMD00013685 | ||
|ancestors_in_cell_lineage_facet= | |accession_numbers=CAGE;DRX008529;DRR009401;DRZ000826;DRZ002211;DRZ012176;DRZ013561!RNA-Seq;DRX012353;DRR013801;DRZ003002; | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000178,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0010053,FF:0000004,FF:0000281 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation1.CNhs11675.12179-129A1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation1.CNhs11675.12179-129A1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation1.CNhs11675.12179-129A1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation1.CNhs11675.12179-129A1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation1.CNhs11675.12179-129A1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12179-129A1 | |id=FF:12179-129A1 | ||
|is_a=EFO:0002091;;FF:0000002;;FF: | |is_a=EFO:0002091;;FF:0000002;;FF:0000281 | ||
|is_obsolete= | |||
|library_id=CNhs11675!RDhi10000 | |||
|library_id_phase_based=2:CNhs11675 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12179 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12179 | |||
|name=Whole blood (ribopure), donor090309, donation1 | |name=Whole blood (ribopure), donor090309, donation1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11675,LSID808,release008,COMPLETED | |profile_hcage=CNhs11675,LSID808,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.548664287594043,0.089121113667536,0,0,0.178242227335072,0,0.0179241972486862,0.401804113981,0.332051476584464,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0.304252466245884,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.274413641679125,0,0,0,0,0,0,0,0,0.127911212010107,0,0,0,0.78350882712214,0,-0.0442810476473271,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0.178242227335072,0,0,0.548664287594043,0,0,0,0.221675690915074,0.089121113667536,0,0,0,0,0,-0.276659975727825,0,0,0,-0.329409021142657,-0.211197402695869,0,0,0.152126233122942,0,0.0802068760973659,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00725248025492485,0,0,0,0.116468312117559,0.347399953274288,0,0,-0.0364132912814638,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0.178242227335072,0.0802068760973659,0,0,0,0.304252466245884,0.304252466245884,0,0,0,0,0,0,-0.247178875285564,0,0.78725323888584,-0.143515142523472,0,0.178242227335072,-0.0974516780062205,0,0.178242227335072,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0.178242227335072,0,0,0.352742736733813,0,0.1985536605168,-0.0683442610773682,0,0,0,0,-0.0693386123438245,0,0.183372982452143,-0.0827201683234173,0,-0.541719912060804,0.131437568442692,0,0,0,-0.269600891854421,-0.469714625798845,0,0,0.152552292045148,0.310387055797918,0.065812650716017,0,-0.212802354216562,0,0.0337175215861943,0.0124737485051174,0,-0.16568193667762,0,0,0,0,0,0,0,0,0,0,0,0.183212828414377,0.221675690915074,0,0,0,-0.0529758448628794,0.326396318191706,0,0,-0.373286155956567,-0.296703033069727,0.133627714897965,-0.442782590175172,0,0.84970399271624,0.13653302201401,0.125825305434006,-0.329409021142657,-0.147401849371139,-0.189981719549847,0,-0.13341396580011,-0.384468515133012,-0.219326871663917,-0.108886934791344,-0.0865579373162144,-1.05316628095203,0.261404051886717,0,0,0,0.458374890281151,0,0,-0.0883106004957739,-0.085859461145877,-0.492745209140639,0.445286721515002,-0.350326160316729,0.0312596845764703,-0.0395325284566706,-0.279194225561522,-0.031064728272918,-0.4215723249037,0,0.818352843593998,0,-0.261178950074402,-0.384107993126323,0.915449530815594,0,0.17423750582124,-0.0683442610773682,0,-0.653840655845285,-0.0705251004229632,0,0,-0.176973116890412,0,0,0,0,0,-0.0956795640645869,0.828379681815724,0.64777621300273,0,-0.0668275300169405,-0.112261342460138,0.143029806926551,0,0.00666305002716883,-0.146009897457394,0,0.0290584186919791,0,-0.0449055926330078,0.962830184352095,0.137137071654645,-0.422394805391737,-0.0584468268118252,0.296531102322697,0.25157426716214,-0.329895167050054,-0.307527274318599,-0.124307696593413,-0.0881268324752877,-0.105719349572327,-0.276659975727825,0.845243821096016,0,-0.091793229870994,0,0.188922889046013,0,0.130653807673628,0.0360147628032564,0.557582702757006,-0.362191524138168,0.696993197585114,0.374319856000251,0,-0.0610808509699167,-0.306718347302346,0,-0.27238437317198,0,0.178242227335072,0.153885382911244,-0.697695966512583,0.190153686116411,-0.0498683430116585,0,-0.790080158389657,0,0,-0.0291582774509965,0.313188249829654,0,0.494048793474834,0.510671062162778,0.657123416442554,0.285833040546066,0,0,-0.645700337992725,0,0,-0.60592806381803,0,-0.441541096623561,-0.253326341486756,0,-0.108622809454255,0,0,-0.177527765965176,0.983473348717155,0.364459996918016,0,0.178242227335072,-0.249881296598824,-0.116628112990133,0,0.089121113667536,0,-0.0431394574348224,0,0.178242227335072,0,0,0,0,0,-0.031709033719632,-0.354833330216448,0.304252466245884,0,0,0,0,0,0,0.150338474687252,0,0,-0.741723115394382,-0.0285451148675857,-0.12301741567642,0,0,0,0,-0.215723402553475,0.278176028376904,0.304252466245884,-0.131862706497632,0,0.089121113667536,0,0,0.092101237545861,0,0,0,0.089121113667536,-0.057730457053664,0.234113757232559,0,0,0,-0.27695440160179,0,0,0,0,0.330100566747279,0,0,-0.453687946051308,0,0.344278579951588,0.320222234434158,0,-0.0122796808525464,0.382816640457189,-1.30962034064846,0,0,-0.261347131789888,0,0,-0.0301609803891063,0.146543773293948,0,0,0,0,0.089121113667536,0,0.178242227335072,0,0.089937953846128,0,0,0,0,0,0,0,0,0,0,0,0.308152929452314,-0.0922240566585104,-0.0640596705171081,0,0,0,0,0,0,0.0650150905886329,0.110532436727741,0,0.178242227335072,0,0,0,0,0,0,0.346926903930756,0,0,0,0,0,-0.0969923612426051,0,0.178242227335072,0,0.178242227335072,-0.564807121153884,0,0,0.124441981787486,0,0,0,0,0,0,0,0,0,0.548664287594043,0,0,0,0.180933380210436,0.532887947483884,0,0,0,0,0,0.401804113981,0,0.332051476584464,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.0179241972486862,0.178242227335072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.379782886054711,0,0,0,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0.152126233122942,0,0,0,0,0,0,0,0,0.178242227335072,0,0,0,0.0060079782626398,0,0,0,0,0,0,0,-0.0979578962680575,0,0.089121113667536,-0.0920328098005262,0,0,0,0,0,0,-0.198855726989174,-0.283220399823148,-0.0894892367648123,0,0,0,0.219946571314566,0.78350882712214,0,-0.0563935299322461,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,1.43231261220029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0.178242227335072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32910748381611,0,0,0,0.178242227335072,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.667545544901231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178242227335072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178242227335072,0,0.600354474293747,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.550504042515712,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.274332143797021,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,0.274413641679125,0,0,0,0,0,0,0,0,0,0,0,0,-0.06132017915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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=5.2 | |rna_weight_ug=5.2 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.85674962635346e-247!GO:0043227;membrane-bound organelle;2.02705030725163e-130!GO:0043231;intracellular membrane-bound organelle;3.37451881800749e-130!GO:0005737;cytoplasm;4.74791670320694e-128!GO:0043226;organelle;8.15495192211501e-124!GO:0043229;intracellular organelle;3.69339145196917e-123!GO:0044444;cytoplasmic part;5.10166226690422e-83!GO:0044422;organelle part;2.45930736877853e-73!GO:0044446;intracellular organelle part;5.77091944568302e-72!GO:0044237;cellular metabolic process;2.07672053591109e-65!GO:0005515;protein binding;2.07672053591109e-65!GO:0043170;macromolecule metabolic process;1.63767234436328e-64!GO:0032991;macromolecular complex;1.91425844982558e-63!GO:0044238;primary metabolic process;3.33488640355172e-63!GO:0005634;nucleus;1.4140742933487e-59!GO:0003723;RNA binding;4.58823252323652e-51!GO:0044428;nuclear part;3.27598111979393e-49!GO:0030529;ribonucleoprotein complex;2.34760841234697e-47!GO:0019538;protein metabolic process;5.64335221117494e-44!GO:0033036;macromolecule localization;4.03687404864328e-42!GO:0015031;protein transport;1.43780538536237e-41!GO:0043233;organelle lumen;3.17367514302652e-41!GO:0031974;membrane-enclosed lumen;3.17367514302652e-41!GO:0045184;establishment of protein localization;9.08779901158213e-41!GO:0044260;cellular macromolecule metabolic process;1.56874664593325e-40!GO:0044267;cellular protein metabolic process;1.69474947016399e-40!GO:0043283;biopolymer metabolic process;2.07406767063702e-39!GO:0008104;protein localization;3.14398339655063e-39!GO:0005829;cytosol;8.20798442212909e-37!GO:0006412;translation;9.94299924810414e-35!GO:0043234;protein complex;3.76486520106287e-34!GO:0010467;gene expression;6.14419110774317e-33!GO:0016071;mRNA metabolic process;3.25113024234799e-32!GO:0006396;RNA processing;4.05359422132357e-32!GO:0031981;nuclear lumen;1.16091999057501e-31!GO:0031090;organelle membrane;3.30022315037192e-30!GO:0005739;mitochondrion;2.91898357415564e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.27582732088884e-28!GO:0008380;RNA splicing;3.60912249184721e-28!GO:0006397;mRNA processing;7.26611599653672e-28!GO:0016043;cellular component organization and biogenesis;6.55858470920873e-27!GO:0009059;macromolecule biosynthetic process;5.78087048906497e-26!GO:0046907;intracellular transport;6.66238107468509e-25!GO:0006915;apoptosis;1.77297035348938e-24!GO:0012501;programmed cell death;1.77297035348938e-24!GO:0005840;ribosome;5.51653661242254e-24!GO:0006886;intracellular protein transport;8.39974913591503e-24!GO:0031967;organelle envelope;1.11920813996818e-23!GO:0031975;envelope;1.54343120694536e-23!GO:0008219;cell death;1.60323100397426e-23!GO:0016265;death;1.60323100397426e-23!GO:0044445;cytosolic part;7.77997524641306e-23!GO:0065003;macromolecular complex assembly;3.12042605124928e-22!GO:0044249;cellular biosynthetic process;4.04020655099975e-22!GO:0003735;structural constituent of ribosome;5.31919318887573e-22!GO:0009058;biosynthetic process;7.59419854030751e-22!GO:0005654;nucleoplasm;1.54041646570821e-21!GO:0044429;mitochondrial part;2.62468254619823e-21!GO:0033279;ribosomal subunit;1.2542444681769e-20!GO:0005681;spliceosome;4.34189393966109e-20!GO:0051649;establishment of cellular localization;4.52857999243738e-20!GO:0051641;cellular localization;7.89417682106634e-20!GO:0043412;biopolymer modification;2.17712758026167e-19!GO:0006512;ubiquitin cycle;2.17712758026167e-19!GO:0022607;cellular component assembly;2.70455396437407e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.20282787478134e-19!GO:0000166;nucleotide binding;5.01266637470107e-19!GO:0006464;protein modification process;6.29249248480359e-18!GO:0042981;regulation of apoptosis;1.33039321682202e-17!GO:0044451;nucleoplasm part;1.85425422416022e-17!GO:0002376;immune system process;2.69330997188902e-17!GO:0008134;transcription factor binding;2.77358164494097e-17!GO:0043067;regulation of programmed cell death;2.81519848955494e-17!GO:0003676;nucleic acid binding;4.57989498837936e-17!GO:0016192;vesicle-mediated transport;1.38471542764604e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.76031604137782e-16!GO:0044265;cellular macromolecule catabolic process;3.08898211006025e-16!GO:0043687;post-translational protein modification;3.45433093645699e-16!GO:0016462;pyrophosphatase activity;3.66817448886659e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.19013409058343e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;4.97571204897011e-16!GO:0006259;DNA metabolic process;7.96877989931207e-16!GO:0016070;RNA metabolic process;9.72423633006817e-16!GO:0017111;nucleoside-triphosphatase activity;1.05115933985701e-15!GO:0005740;mitochondrial envelope;1.33229885375677e-15!GO:0006996;organelle organization and biogenesis;3.23057482093255e-15!GO:0006119;oxidative phosphorylation;4.65589537111184e-15!GO:0016874;ligase activity;7.31239157643069e-15!GO:0031966;mitochondrial membrane;8.15341470738943e-15!GO:0032553;ribonucleotide binding;2.03474255572519e-14!GO:0032555;purine ribonucleotide binding;2.03474255572519e-14!GO:0019866;organelle inner membrane;4.72957761058988e-14!GO:0007243;protein kinase cascade;5.40324107349626e-14!GO:0016604;nuclear body;5.96114413048174e-14!GO:0017076;purine nucleotide binding;1.28083501819498e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.3031526381652e-13!GO:0019941;modification-dependent protein catabolic process;1.48306891057454e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.48306891057454e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.41365053504854e-13!GO:0044257;cellular protein catabolic process;3.36307792016e-13!GO:0007242;intracellular signaling cascade;4.1455549865238e-13!GO:0005794;Golgi apparatus;5.25558468695764e-13!GO:0022618;protein-RNA complex assembly;7.79748537838071e-13!GO:0050794;regulation of cellular process;8.05591140405534e-13!GO:0005768;endosome;1.59718508546611e-12!GO:0043285;biopolymer catabolic process;1.93374806344428e-12!GO:0005743;mitochondrial inner membrane;2.0262006863027e-12!GO:0048770;pigment granule;2.5770581984735e-12!GO:0042470;melanosome;2.5770581984735e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.0442493637598e-12!GO:0016607;nuclear speck;5.82201662616856e-12!GO:0009057;macromolecule catabolic process;6.34075778058214e-12!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.42984498926548e-12!GO:0006955;immune response;8.95322163066084e-12!GO:0012505;endomembrane system;9.16083479440405e-12!GO:0044248;cellular catabolic process;1.25550335294884e-11!GO:0006605;protein targeting;1.51622421832474e-11!GO:0006793;phosphorus metabolic process;1.61040079296198e-11!GO:0006796;phosphate metabolic process;1.61040079296198e-11!GO:0051246;regulation of protein metabolic process;1.89356332994942e-11!GO:0006913;nucleocytoplasmic transport;3.04181515160165e-11!GO:0051169;nuclear transport;6.2378118202673e-11!GO:0015934;large ribosomal subunit;6.85816411361021e-11!GO:0003712;transcription cofactor activity;7.21551638698312e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.26796460783813e-10!GO:0043069;negative regulation of programmed cell death;1.28236275180523e-10!GO:0015935;small ribosomal subunit;1.49024812333427e-10!GO:0005773;vacuole;1.50673625513288e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.59051841983372e-10!GO:0043066;negative regulation of apoptosis;1.80425936526041e-10!GO:0005524;ATP binding;1.82575014099163e-10!GO:0016310;phosphorylation;2.03329583456199e-10!GO:0006457;protein folding;2.31011381329415e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;2.66695174959776e-10!GO:0000375;RNA splicing, via transesterification reactions;2.66695174959776e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.66695174959776e-10!GO:0000502;proteasome complex (sensu Eukaryota);3.02448324313331e-10!GO:0008639;small protein conjugating enzyme activity;3.54338602414049e-10!GO:0008135;translation factor activity, nucleic acid binding;3.54338602414049e-10!GO:0032559;adenyl ribonucleotide binding;3.6829603014477e-10!GO:0019787;small conjugating protein ligase activity;5.04620421564597e-10!GO:0065009;regulation of a molecular function;5.08321561022059e-10!GO:0006916;anti-apoptosis;6.60035786561488e-10!GO:0048193;Golgi vesicle transport;7.24605664594861e-10!GO:0004842;ubiquitin-protein ligase activity;7.29205803131331e-10!GO:0050789;regulation of biological process;8.19065340852738e-10!GO:0043228;non-membrane-bound organelle;1.01050006297462e-09!GO:0043232;intracellular non-membrane-bound organelle;1.01050006297462e-09!GO:0005730;nucleolus;1.14564502531534e-09!GO:0000323;lytic vacuole;1.18424398392263e-09!GO:0005764;lysosome;1.18424398392263e-09!GO:0051186;cofactor metabolic process;1.2880192696483e-09!GO:0048523;negative regulation of cellular process;1.32027468517972e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.34157202745824e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.40549141671944e-09!GO:0030554;adenyl nucleotide binding;2.2274243809351e-09!GO:0030163;protein catabolic process;3.79329783362771e-09!GO:0005635;nuclear envelope;4.56214190276972e-09!GO:0016887;ATPase activity;4.68766217179905e-09!GO:0044455;mitochondrial membrane part;4.89735241506961e-09!GO:0006323;DNA packaging;5.17683649653294e-09!GO:0006950;response to stress;6.82961189427059e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.10160876946518e-09!GO:0005770;late endosome;9.202837276126e-09!GO:0016787;hydrolase activity;1.15642422676267e-08!GO:0042623;ATPase activity, coupled;1.63098837749411e-08!GO:0006446;regulation of translational initiation;1.87225242132503e-08!GO:0005746;mitochondrial respiratory chain;2.00674535185412e-08!GO:0006366;transcription from RNA polymerase II promoter;2.22343509070234e-08!GO:0016568;chromatin modification;2.70907627141497e-08!GO:0065007;biological regulation;3.18150615014211e-08!GO:0031980;mitochondrial lumen;3.62718566379424e-08!GO:0005759;mitochondrial matrix;3.62718566379424e-08!GO:0003743;translation initiation factor activity;3.63937872762455e-08!GO:0048519;negative regulation of biological process;4.08346767859457e-08!GO:0003713;transcription coactivator activity;4.13630978777108e-08!GO:0006974;response to DNA damage stimulus;4.13630978777108e-08!GO:0016881;acid-amino acid ligase activity;4.55506684949761e-08!GO:0044440;endosomal part;4.81783346181394e-08!GO:0010008;endosome membrane;4.81783346181394e-08!GO:0019222;regulation of metabolic process;5.02557848970863e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.63428175299522e-08!GO:0019829;cation-transporting ATPase activity;5.74273622443708e-08!GO:0051276;chromosome organization and biogenesis;6.2120999287148e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.40944337842696e-08!GO:0006413;translational initiation;8.69824743882261e-08!GO:0050136;NADH dehydrogenase (quinone) activity;1.0287851644696e-07!GO:0003954;NADH dehydrogenase activity;1.0287851644696e-07!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.0287851644696e-07!GO:0043065;positive regulation of apoptosis;1.05467364597028e-07!GO:0007264;small GTPase mediated signal transduction;1.32290994207483e-07!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.51094682843812e-07!GO:0019899;enzyme binding;1.51887165908452e-07!GO:0003924;GTPase activity;1.79373692930753e-07!GO:0009150;purine ribonucleotide metabolic process;1.85784815736853e-07!GO:0043068;positive regulation of programmed cell death;1.87867415105467e-07!GO:0051082;unfolded protein binding;2.0870033307002e-07!GO:0015986;ATP synthesis coupled proton transport;2.12452356686456e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.12452356686456e-07!GO:0009259;ribonucleotide metabolic process;2.21991741494273e-07!GO:0006163;purine nucleotide metabolic process;2.76877803710736e-07!GO:0042775;organelle ATP synthesis coupled electron transport;2.81017615634785e-07!GO:0042773;ATP synthesis coupled electron transport;2.81017615634785e-07!GO:0031965;nuclear membrane;3.37310951108203e-07!GO:0005783;endoplasmic reticulum;3.69246074141387e-07!GO:0045321;leukocyte activation;4.17521940011565e-07!GO:0032446;protein modification by small protein conjugation;4.22908463046815e-07!GO:0050790;regulation of catalytic activity;4.6585544813472e-07!GO:0006917;induction of apoptosis;5.14881222020951e-07!GO:0009615;response to virus;5.28873152175867e-07!GO:0006417;regulation of translation;5.46117012916411e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.8722867956884e-07!GO:0009152;purine ribonucleotide biosynthetic process;6.42573471162424e-07!GO:0017038;protein import;7.19476648425895e-07!GO:0005525;GTP binding;7.86608213799634e-07!GO:0030964;NADH dehydrogenase complex (quinone);8.30435923657678e-07!GO:0045271;respiratory chain complex I;8.30435923657678e-07!GO:0005747;mitochondrial respiratory chain complex I;8.30435923657678e-07!GO:0012502;induction of programmed cell death;8.54182475636595e-07!GO:0016567;protein ubiquitination;9.92904384444025e-07!GO:0006164;purine nucleotide biosynthetic process;9.94562975949079e-07!GO:0008565;protein transporter activity;1.0232658417312e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.08845540813806e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.08845540813806e-06!GO:0009967;positive regulation of signal transduction;1.16636666705661e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.23546859324873e-06!GO:0007049;cell cycle;1.23546859324873e-06!GO:0006461;protein complex assembly;1.27024453882614e-06!GO:0046034;ATP metabolic process;1.37371416427549e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.41772554641162e-06!GO:0008026;ATP-dependent helicase activity;1.45411654625944e-06!GO:0060090;molecular adaptor activity;1.71823420125961e-06!GO:0016563;transcription activator activity;1.82571939025794e-06!GO:0008632;apoptotic program;2.02444730696224e-06!GO:0043566;structure-specific DNA binding;2.02444730696224e-06!GO:0009260;ribonucleotide biosynthetic process;2.10495851538005e-06!GO:0009056;catabolic process;2.21521543367111e-06!GO:0002764;immune response-regulating signal transduction;2.30013403829381e-06!GO:0006732;coenzyme metabolic process;2.38578354602676e-06!GO:0006754;ATP biosynthetic process;2.45410189912658e-06!GO:0006753;nucleoside phosphate metabolic process;2.45410189912658e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.53574862977221e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.53574862977221e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.53574862977221e-06!GO:0051170;nuclear import;2.58384327403575e-06!GO:0005774;vacuolar membrane;2.79005459772586e-06!GO:0006281;DNA repair;3.16554709416073e-06!GO:0001775;cell activation;3.25086574631612e-06!GO:0004386;helicase activity;3.25767890021977e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.38985168145978e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.38985168145978e-06!GO:0048522;positive regulation of cellular process;3.43557928797178e-06!GO:0006606;protein import into nucleus;3.45808554511045e-06!GO:0046649;lymphocyte activation;3.74826548737488e-06!GO:0008047;enzyme activator activity;3.86388552991804e-06!GO:0050657;nucleic acid transport;3.86388552991804e-06!GO:0051236;establishment of RNA localization;3.86388552991804e-06!GO:0050658;RNA transport;3.86388552991804e-06!GO:0009141;nucleoside triphosphate metabolic process;4.16290869144993e-06!GO:0044453;nuclear membrane part;4.58437025003205e-06!GO:0002757;immune response-activating signal transduction;5.02471153404939e-06!GO:0006403;RNA localization;5.16677479435816e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.45867640103355e-06!GO:0031326;regulation of cellular biosynthetic process;5.75894865161701e-06!GO:0005765;lysosomal membrane;6.10417168629675e-06!GO:0032561;guanyl ribonucleotide binding;6.56966214993428e-06!GO:0019001;guanyl nucleotide binding;6.56966214993428e-06!GO:0031902;late endosome membrane;6.64826679220423e-06!GO:0005793;ER-Golgi intermediate compartment;7.06812747171382e-06!GO:0051188;cofactor biosynthetic process;7.13317690369526e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.3285910631186e-06!GO:0002768;immune response-regulating cell surface receptor signaling pathway;7.73199350806222e-06!GO:0005839;proteasome core complex (sensu Eukaryota);8.00055469070713e-06!GO:0015078;hydrogen ion transmembrane transporter activity;8.70630364994055e-06!GO:0031323;regulation of cellular metabolic process;9.63458664682918e-06!GO:0000151;ubiquitin ligase complex;9.94140701517133e-06!GO:0003697;single-stranded DNA binding;1.10364574050373e-05!GO:0001772;immunological synapse;1.16748700333921e-05!GO:0044437;vacuolar part;1.21291959574684e-05!GO:0048518;positive regulation of biological process;1.43595246277923e-05!GO:0007265;Ras protein signal transduction;1.58440327188232e-05!GO:0044431;Golgi apparatus part;1.71785776980017e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;1.75365781073596e-05!GO:0030097;hemopoiesis;1.81616054353674e-05!GO:0009889;regulation of biosynthetic process;1.83419837668011e-05!GO:0051336;regulation of hydrolase activity;1.87202301331994e-05!GO:0030218;erythrocyte differentiation;2.17423746707167e-05!GO:0065004;protein-DNA complex assembly;2.21257936317586e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.40548690100313e-05!GO:0048475;coated membrane;2.40548690100313e-05!GO:0030117;membrane coat;2.40548690100313e-05!GO:0006333;chromatin assembly or disassembly;2.46385050851268e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.72325094583712e-05!GO:0030120;vesicle coat;2.77297903683658e-05!GO:0030662;coated vesicle membrane;2.77297903683658e-05!GO:0044432;endoplasmic reticulum part;2.91030573822681e-05!GO:0016197;endosome transport;3.51574684725523e-05!GO:0032940;secretion by cell;3.53540678530904e-05!GO:0031324;negative regulation of cellular metabolic process;3.93464402924304e-05!GO:0006613;cotranslational protein targeting to membrane;4.03757626624349e-05!GO:0004298;threonine endopeptidase activity;4.39804627398593e-05!GO:0016564;transcription repressor activity;4.50108363829253e-05!GO:0051726;regulation of cell cycle;4.75235096076233e-05!GO:0000074;regulation of progression through cell cycle;4.87031119767732e-05!GO:0051028;mRNA transport;5.1052001291945e-05!GO:0005643;nuclear pore;5.56020178645817e-05!GO:0031982;vesicle;5.73236986614139e-05!GO:0030695;GTPase regulator activity;6.0801559336211e-05!GO:0009117;nucleotide metabolic process;6.18215138159361e-05!GO:0009892;negative regulation of metabolic process;6.55609318096226e-05!GO:0005070;SH3/SH2 adaptor activity;6.55609318096226e-05!GO:0000245;spliceosome assembly;6.97011446705501e-05!GO:0042110;T cell activation;7.64461793109467e-05!GO:0002520;immune system development;7.99344020492691e-05!GO:0006888;ER to Golgi vesicle-mediated transport;8.76070649205459e-05!GO:0042254;ribosome biogenesis and assembly;8.77937983178737e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.97964227996764e-05!GO:0009719;response to endogenous stimulus;9.27933298827292e-05!GO:0009966;regulation of signal transduction;9.4862649169023e-05!GO:0016044;membrane organization and biogenesis;9.48859902236968e-05!GO:0045259;proton-transporting ATP synthase complex;0.000101744856516286!GO:0005761;mitochondrial ribosome;0.000105792972765649!GO:0000313;organellar ribosome;0.000105792972765649!GO:0006401;RNA catabolic process;0.000117573344860203!GO:0004674;protein serine/threonine kinase activity;0.000126019007525056!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000133448647732283!GO:0051168;nuclear export;0.000139184039655461!GO:0005096;GTPase activator activity;0.000139596635627996!GO:0031252;leading edge;0.000142435670299853!GO:0009060;aerobic respiration;0.000143572966240233!GO:0045786;negative regulation of progression through cell cycle;0.000143799361805018!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000154263448925711!GO:0003724;RNA helicase activity;0.000158426260870056!GO:0030099;myeloid cell differentiation;0.000162195388763539!GO:0016481;negative regulation of transcription;0.000183179928437433!GO:0005798;Golgi-associated vesicle;0.000186669699149154!GO:0005789;endoplasmic reticulum membrane;0.000193097632231952!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00019648536231181!GO:0051251;positive regulation of lymphocyte activation;0.000201348347790672!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000201860853953259!GO:0030532;small nuclear ribonucleoprotein complex;0.000211114818797865!GO:0010468;regulation of gene expression;0.000212763854027817!GO:0005083;small GTPase regulator activity;0.000251723740211623!GO:0031410;cytoplasmic vesicle;0.0002537932897659!GO:0009607;response to biotic stimulus;0.000261561303912502!GO:0006612;protein targeting to membrane;0.000264281203310752!GO:0009055;electron carrier activity;0.000288636813892012!GO:0046930;pore complex;0.000293309608979087!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000295157967919681!GO:0015399;primary active transmembrane transporter activity;0.000295157967919681!GO:0045045;secretory pathway;0.000303415711469632!GO:0005885;Arp2/3 protein complex;0.000311925505038012!GO:0050851;antigen receptor-mediated signaling pathway;0.000336573521070332!GO:0016740;transferase activity;0.000366212950693402!GO:0006752;group transfer coenzyme metabolic process;0.000380320661115379!GO:0000785;chromatin;0.000393432234698729!GO:0005694;chromosome;0.000432988918678891!GO:0005057;receptor signaling protein activity;0.000432988918678891!GO:0018193;peptidyl-amino acid modification;0.000444055496942096!GO:0009108;coenzyme biosynthetic process;0.000467568711346182!GO:0008270;zinc ion binding;0.000476704099874314!GO:0000139;Golgi membrane;0.000503087841985604!GO:0043492;ATPase activity, coupled to movement of substances;0.000503553990522815!GO:0001816;cytokine production;0.000513989649834019!GO:0005769;early endosome;0.000534982651549543!GO:0048468;cell development;0.000550384665343196!GO:0042101;T cell receptor complex;0.000566736753396629!GO:0031988;membrane-bound vesicle;0.000593047882878814!GO:0048534;hemopoietic or lymphoid organ development;0.000598073811809792!GO:0065002;intracellular protein transport across a membrane;0.000684275781016142!GO:0022402;cell cycle process;0.000685345671086756!GO:0008654;phospholipid biosynthetic process;0.000685620619801448!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000756214113670968!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000762589021223158!GO:0045333;cellular respiration;0.00082674336494845!GO:0051427;hormone receptor binding;0.000830079201037893!GO:0006402;mRNA catabolic process;0.000854528631553975!GO:0006350;transcription;0.000869768563519476!GO:0046914;transition metal ion binding;0.000888086396022695!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000903513426464719!GO:0007034;vacuolar transport;0.000928318189324396!GO:0006650;glycerophospholipid metabolic process;0.000962188189611723!GO:0016779;nucleotidyltransferase activity;0.00106516432116134!GO:0044427;chromosomal part;0.00108837388964893!GO:0043087;regulation of GTPase activity;0.00109814125171068!GO:0016363;nuclear matrix;0.00110918551732906!GO:0006919;caspase activation;0.00113639083856927!GO:0003714;transcription corepressor activity;0.00114534793772031!GO:0008186;RNA-dependent ATPase activity;0.00121102706474174!GO:0003690;double-stranded DNA binding;0.00124681883299066!GO:0042113;B cell activation;0.00139339659165059!GO:0016023;cytoplasmic membrane-bound vesicle;0.00139957127113178!GO:0006891;intra-Golgi vesicle-mediated transport;0.00142266122961077!GO:0043281;regulation of caspase activity;0.00142749760661636!GO:0035257;nuclear hormone receptor binding;0.00143111684728438!GO:0030384;phosphoinositide metabolic process;0.00155461348131996!GO:0006099;tricarboxylic acid cycle;0.00167139837511889!GO:0046356;acetyl-CoA catabolic process;0.00167139837511889!GO:0015992;proton transport;0.00186358824110158!GO:0006818;hydrogen transport;0.00190363152216147!GO:0043280;positive regulation of caspase activity;0.00194962330491437!GO:0016072;rRNA metabolic process;0.0023935156424071!GO:0030036;actin cytoskeleton organization and biogenesis;0.00241915269053038!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00253673241307114!GO:0004812;aminoacyl-tRNA ligase activity;0.00253673241307114!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00253673241307114!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00256217784226829!GO:0030041;actin filament polymerization;0.00259449998085375!GO:0008234;cysteine-type peptidase activity;0.00276461385347932!GO:0005813;centrosome;0.00281959294791357!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00287276236270274!GO:0006611;protein export from nucleus;0.00289639883048701!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00298173713224319!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00300469611853175!GO:0008624;induction of apoptosis by extracellular signals;0.0030697166921578!GO:0006364;rRNA processing;0.00312019595396158!GO:0003729;mRNA binding;0.00327062792139608!GO:0004004;ATP-dependent RNA helicase activity;0.00327062792139608!GO:0002252;immune effector process;0.00327721327804146!GO:0001726;ruffle;0.00327892311139367!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00360638048479509!GO:0043038;amino acid activation;0.00361872780643347!GO:0006418;tRNA aminoacylation for protein translation;0.00361872780643347!GO:0043039;tRNA aminoacylation;0.00361872780643347!GO:0030118;clathrin coat;0.0036933432418355!GO:0003725;double-stranded RNA binding;0.00382311554596424!GO:0016301;kinase activity;0.00384138016281121!GO:0051187;cofactor catabolic process;0.00388528158603899!GO:0050871;positive regulation of B cell activation;0.00388528158603899!GO:0046822;regulation of nucleocytoplasmic transport;0.00389022588601774!GO:0022890;inorganic cation transmembrane transporter activity;0.00390483663084007!GO:0006084;acetyl-CoA metabolic process;0.00394998602239988!GO:0006399;tRNA metabolic process;0.00401173494499216!GO:0007050;cell cycle arrest;0.00401486861709147!GO:0042802;identical protein binding;0.00410801830361429!GO:0016791;phosphoric monoester hydrolase activity;0.00410857794068225!GO:0006334;nucleosome assembly;0.00423253726273387!GO:0006468;protein amino acid phosphorylation;0.00426668200888197!GO:0006897;endocytosis;0.0043200737625047!GO:0010324;membrane invagination;0.0043200737625047!GO:0031497;chromatin assembly;0.00432906161570994!GO:0008154;actin polymerization and/or depolymerization;0.00443353275432775!GO:0004722;protein serine/threonine phosphatase activity;0.00444202398926153!GO:0031901;early endosome membrane;0.00445265340620523!GO:0002443;leukocyte mediated immunity;0.00446663269797322!GO:0005667;transcription factor complex;0.00453420602711105!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00455891496748737!GO:0005741;mitochondrial outer membrane;0.00472657821751624!GO:0030658;transport vesicle membrane;0.00476475051374432!GO:0001819;positive regulation of cytokine production;0.00489892922394885!GO:0048250;mitochondrial iron ion transport;0.00491755335654396!GO:0051090;regulation of transcription factor activity;0.00508206808149983!GO:0019904;protein domain specific binding;0.00512782052771189!GO:0006643;membrane lipid metabolic process;0.00523593773417372!GO:0050865;regulation of cell activation;0.00536430660625513!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00546496341091908!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0055009671126421!GO:0051249;regulation of lymphocyte activation;0.00553406216268519!GO:0043021;ribonucleoprotein binding;0.00575701587729694!GO:0050870;positive regulation of T cell activation;0.00590514801439977!GO:0048471;perinuclear region of cytoplasm;0.00593132605417297!GO:0031072;heat shock protein binding;0.00609953750207865!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00642108076087662!GO:0051092;activation of NF-kappaB transcription factor;0.00645764813469408!GO:0008637;apoptotic mitochondrial changes;0.00649580366971219!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00649580366971219!GO:0009109;coenzyme catabolic process;0.00661655852669589!GO:0045892;negative regulation of transcription, DNA-dependent;0.00663706020349641!GO:0042168;heme metabolic process;0.00694861516697834!GO:0006968;cellular defense response;0.00710796311342868!GO:0005099;Ras GTPase activator activity;0.00711528170070886!GO:0030867;rough endoplasmic reticulum membrane;0.00729944806343107!GO:0045576;mast cell activation;0.0074495001551942!GO:0050811;GABA receptor binding;0.00759626638993088!GO:0051338;regulation of transferase activity;0.00778859503672172!GO:0043506;regulation of JNK activity;0.00789491458086474!GO:0005815;microtubule organizing center;0.00801157234287618!GO:0002440;production of molecular mediator of immune response;0.00816286023288715!GO:0048500;signal recognition particle;0.0082631907268398!GO:0007041;lysosomal transport;0.0086523892505051!GO:0033116;ER-Golgi intermediate compartment membrane;0.008654455794471!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0088689076703625!GO:0032318;regulation of Ras GTPase activity;0.00887974445452833!GO:0051252;regulation of RNA metabolic process;0.0089841578008985!GO:0007005;mitochondrion organization and biogenesis;0.00904354565274251!GO:0002521;leukocyte differentiation;0.00923111253816838!GO:0019867;outer membrane;0.00928764395819926!GO:0030660;Golgi-associated vesicle membrane;0.0095362958938722!GO:0051707;response to other organism;0.00959166388208231!GO:0043085;positive regulation of catalytic activity;0.00962456132110455!GO:0051345;positive regulation of hydrolase activity;0.00962456132110455!GO:0006914;autophagy;0.00962723201534497!GO:0006778;porphyrin metabolic process;0.00981117446021367!GO:0033013;tetrapyrrole metabolic process;0.00981117446021367!GO:0005637;nuclear inner membrane;0.00983486858569657!GO:0043623;cellular protein complex assembly;0.00990119445423612!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00991042736009242!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00991042736009242!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00991042736009242!GO:0006783;heme biosynthetic process;0.00991459387092676!GO:0002274;myeloid leukocyte activation;0.00991459387092676!GO:0046474;glycerophospholipid biosynthetic process;0.009916512116857!GO:0051223;regulation of protein transport;0.00992007536220472!GO:0043549;regulation of kinase activity;0.00994994917715808!GO:0043299;leukocyte degranulation;0.0102655003485824!GO:0006644;phospholipid metabolic process;0.0109171067703677!GO:0031968;organelle outer membrane;0.0110613271805687!GO:0022415;viral reproductive process;0.0113036464529171!GO:0051920;peroxiredoxin activity;0.0113082893549626!GO:0006310;DNA recombination;0.0116717969125009!GO:0001817;regulation of cytokine production;0.0117605788782699!GO:0042287;MHC protein binding;0.0118764362083011!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0121400164433911!GO:0048487;beta-tubulin binding;0.0124212857275044!GO:0016505;apoptotic protease activator activity;0.0125610501552863!GO:0031625;ubiquitin protein ligase binding;0.0129135898812076!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.012992819040925!GO:0045047;protein targeting to ER;0.012992819040925!GO:0030521;androgen receptor signaling pathway;0.01305332276265!GO:0045449;regulation of transcription;0.0131621683167456!GO:0019883;antigen processing and presentation of endogenous antigen;0.0131796223978501!GO:0030518;steroid hormone receptor signaling pathway;0.0136274336688627!GO:0006260;DNA replication;0.0136307710032459!GO:0043300;regulation of leukocyte degranulation;0.0136668061174157!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0140253336061804!GO:0051789;response to protein stimulus;0.0140604465828362!GO:0006986;response to unfolded protein;0.0140604465828362!GO:0030258;lipid modification;0.0144620056359259!GO:0046456;icosanoid biosynthetic process;0.0145496939304288!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0145760553616011!GO:0030133;transport vesicle;0.0146001342483285!GO:0046489;phosphoinositide biosynthetic process;0.0146669341322553!GO:0005521;lamin binding;0.0154171326966556!GO:0004185;serine carboxypeptidase activity;0.0154171326966556!GO:0006779;porphyrin biosynthetic process;0.0154660892362971!GO:0033014;tetrapyrrole biosynthetic process;0.0154660892362971!GO:0016788;hydrolase activity, acting on ester bonds;0.0169454475460244!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.017078576531597!GO:0002819;regulation of adaptive immune response;0.017078576531597!GO:0030029;actin filament-based process;0.0172644951367176!GO:0005791;rough endoplasmic reticulum;0.0174459711998922!GO:0043488;regulation of mRNA stability;0.0174786384586687!GO:0043487;regulation of RNA stability;0.0174786384586687!GO:0045859;regulation of protein kinase activity;0.0175289355108335!GO:0019955;cytokine binding;0.0179171485822938!GO:0009893;positive regulation of metabolic process;0.0180688242614626!GO:0048821;erythrocyte development;0.0181174241137478!GO:0030119;AP-type membrane coat adaptor complex;0.0181795645081974!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.018407224466499!GO:0032774;RNA biosynthetic process;0.0186052060809317!GO:0009165;nucleotide biosynthetic process;0.0189814069214124!GO:0004177;aminopeptidase activity;0.019346838951823!GO:0000118;histone deacetylase complex;0.0194047152768375!GO:0000209;protein polyubiquitination;0.0196676490823726!GO:0006352;transcription initiation;0.0198136660761885!GO:0046983;protein dimerization activity;0.0198136660761885!GO:0030131;clathrin adaptor complex;0.0198136660761885!GO:0047485;protein N-terminus binding;0.0199693435191568!GO:0006351;transcription, DNA-dependent;0.0200104665844339!GO:0001836;release of cytochrome c from mitochondria;0.0201310081722162!GO:0001516;prostaglandin biosynthetic process;0.0203896522762939!GO:0046457;prostanoid biosynthetic process;0.0203896522762939!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0212635052322993!GO:0008312;7S RNA binding;0.0214864469128792!GO:0045653;negative regulation of megakaryocyte differentiation;0.0217593193720515!GO:0008287;protein serine/threonine phosphatase complex;0.0220118231912915!GO:0030132;clathrin coat of coated pit;0.0223662341265126!GO:0002448;mast cell mediated immunity;0.022719541516592!GO:0043303;mast cell degranulation;0.022719541516592!GO:0045058;T cell selection;0.0228612119462803!GO:0006376;mRNA splice site selection;0.0231970464944547!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0231970464944547!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0232982087775778!GO:0050863;regulation of T cell activation;0.0234736888786858!GO:0015631;tubulin binding;0.0236606172979231!GO:0019864;IgG binding;0.0243084077980935!GO:0035258;steroid hormone receptor binding;0.0243998407946209!GO:0006607;NLS-bearing substrate import into nucleus;0.0247000920550275!GO:0030674;protein binding, bridging;0.0249271254912181!GO:0043235;receptor complex;0.0249635619792925!GO:0006672;ceramide metabolic process;0.0252314306052906!GO:0048002;antigen processing and presentation of peptide antigen;0.0256400345769817!GO:0007259;JAK-STAT cascade;0.0257751052592647!GO:0046578;regulation of Ras protein signal transduction;0.0263194771026329!GO:0008656;caspase activator activity;0.0263194771026329!GO:0002449;lymphocyte mediated immunity;0.0264238068489338!GO:0046979;TAP2 binding;0.026457896867263!GO:0046977;TAP binding;0.026457896867263!GO:0046978;TAP1 binding;0.026457896867263!GO:0033157;regulation of intracellular protein transport;0.0269246623640661!GO:0042306;regulation of protein import into nucleus;0.0269246623640661!GO:0002444;myeloid leukocyte mediated immunity;0.0270154860516367!GO:0019863;IgE binding;0.0272930164119831!GO:0050853;B cell receptor signaling pathway;0.0272930164119831!GO:0042613;MHC class II protein complex;0.0278148523028418!GO:0044262;cellular carbohydrate metabolic process;0.0286286893713798!GO:0051881;regulation of mitochondrial membrane potential;0.0287309980637095!GO:0000278;mitotic cell cycle;0.0291523723158633!GO:0045792;negative regulation of cell size;0.0291523723158633!GO:0030125;clathrin vesicle coat;0.0293426784589795!GO:0030665;clathrin coated vesicle membrane;0.0293426784589795!GO:0046467;membrane lipid biosynthetic process;0.0294714058870011!GO:0016584;nucleosome positioning;0.0296177337639288!GO:0030027;lamellipodium;0.0297161140403062!GO:0002218;activation of innate immune response;0.0300912775343531!GO:0002758;innate immune response-activating signal transduction;0.0300912775343531!GO:0043304;regulation of mast cell degranulation;0.0302651178872563!GO:0051049;regulation of transport;0.0303585934792678!GO:0002682;regulation of immune system process;0.0306001455668169!GO:0032763;regulation of mast cell cytokine production;0.0307352609486443!GO:0032762;mast cell cytokine production;0.0307352609486443!GO:0006740;NADPH regeneration;0.0307352609486443!GO:0006098;pentose-phosphate shunt;0.0307352609486443!GO:0030522;intracellular receptor-mediated signaling pathway;0.0308078908121573!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0309325700488702!GO:0006595;polyamine metabolic process;0.0310947199474255!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0312298973859597!GO:0042108;positive regulation of cytokine biosynthetic process;0.0317358048337507!GO:0019865;immunoglobulin binding;0.032024096330724!GO:0043507;positive regulation of JNK activity;0.032024096330724!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.032024096330724!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.032024096330724!GO:0002467;germinal center formation;0.032024096330724!GO:0033367;protein localization in mast cell secretory granule;0.032024096330724!GO:0033365;protein localization in organelle;0.032024096330724!GO:0033371;T cell secretory granule organization and biogenesis;0.032024096330724!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.032024096330724!GO:0033375;protease localization in T cell secretory granule;0.032024096330724!GO:0042629;mast cell granule;0.032024096330724!GO:0033377;maintenance of protein localization in T cell secretory granule;0.032024096330724!GO:0033364;mast cell secretory granule organization and biogenesis;0.032024096330724!GO:0033380;granzyme B localization in T cell secretory granule;0.032024096330724!GO:0033379;maintenance of protease localization in T cell secretory granule;0.032024096330724!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.032024096330724!GO:0033368;protease localization in mast cell secretory granule;0.032024096330724!GO:0033366;protein localization in secretory granule;0.032024096330724!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.032024096330724!GO:0033374;protein localization in T cell secretory granule;0.032024096330724!GO:0031294;lymphocyte costimulation;0.0320303588343669!GO:0031295;T cell costimulation;0.0320303588343669!GO:0005869;dynactin complex;0.0321534505715073!GO:0006289;nucleotide-excision repair;0.0329811317460035!GO:0002253;activation of immune response;0.0331765824856385!GO:0000287;magnesium ion binding;0.0331765824856385!GO:0016251;general RNA polymerase II transcription factor activity;0.0332116367325527!GO:0006213;pyrimidine nucleoside metabolic process;0.0333327119501809!GO:0003746;translation elongation factor activity;0.0334193426411451!GO:0051091;positive regulation of transcription factor activity;0.0334512119957582!GO:0030663;COPI coated vesicle membrane;0.0340354226946082!GO:0030126;COPI vesicle coat;0.0340354226946082!GO:0030308;negative regulation of cell growth;0.0340958476849402!GO:0030100;regulation of endocytosis;0.0342340566311197!GO:0046519;sphingoid metabolic process;0.0345315967227973!GO:0045454;cell redox homeostasis;0.0345484880744843!GO:0019901;protein kinase binding;0.0348140993225053!GO:0005048;signal sequence binding;0.0348742288324326!GO:0009897;external side of plasma membrane;0.0353126821220854!GO:0015923;mannosidase activity;0.035813729571234!GO:0008017;microtubule binding;0.0360154286351064!GO:0045309;protein phosphorylated amino acid binding;0.0360154286351064!GO:0000303;response to superoxide;0.0360216898700859!GO:0043028;caspase regulator activity;0.036243961419457!GO:0050727;regulation of inflammatory response;0.0370256437753313!GO:0031347;regulation of defense response;0.0370256437753313!GO:0006509;membrane protein ectodomain proteolysis;0.0370256437753313!GO:0033619;membrane protein proteolysis;0.0370256437753313!GO:0005484;SNAP receptor activity;0.0371732854361343!GO:0030137;COPI-coated vesicle;0.0371732854361343!GO:0006497;protein amino acid lipidation;0.0373808232179763!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0373808232179763!GO:0002250;adaptive immune response;0.0381854998715609!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0381854998715609!GO:0008333;endosome to lysosome transport;0.0382204617944275!GO:0006007;glucose catabolic process;0.0391001655022239!GO:0015630;microtubule cytoskeleton;0.0396382060370348!GO:0017166;vinculin binding;0.0410752056053348!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0415021219785829!GO:0051098;regulation of binding;0.0415021219785829!GO:0022406;membrane docking;0.0416851278073768!GO:0048278;vesicle docking;0.0416851278073768!GO:0006405;RNA export from nucleus;0.0422321752859451!GO:0006904;vesicle docking during exocytosis;0.0422321752859451!GO:0045926;negative regulation of growth;0.0422321752859451!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0436460426324432!GO:0019079;viral genome replication;0.0440007054021706!GO:0032760;positive regulation of tumor necrosis factor production;0.0449238500565544!GO:0016859;cis-trans isomerase activity;0.0453306371240443!GO:0030503;regulation of cell redox homeostasis;0.0455898229008754!GO:0030217;T cell differentiation;0.0456650857961936!GO:0002377;immunoglobulin production;0.0457196828443496!GO:0030140;trans-Golgi network transport vesicle;0.0457334959498017!GO:0008629;induction of apoptosis by intracellular signals;0.0459385432272627!GO:0001784;phosphotyrosine binding;0.0462991138155293!GO:0004718;Janus kinase activity;0.0472426486184748!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.047247677081939!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.047247677081939!GO:0031461;cullin-RING ubiquitin ligase complex;0.0478199544295206!GO:0015036;disulfide oxidoreductase activity;0.0478839856760671!GO:0007040;lysosome organization and biogenesis;0.0480389154277675!GO:0030176;integral to endoplasmic reticulum membrane;0.0482669113769731!GO:0051056;regulation of small GTPase mediated signal transduction;0.0482669113769731!GO:0042608;T cell receptor binding;0.0493101864040188!GO:0016853;isomerase activity;0.0493225099789071!GO:0019318;hexose metabolic process;0.0498469298318885 | |||
|sample_id=12179 | |sample_id=12179 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=GATA6:4.20543272298;ETS1,2:2.49966190304;SPI1:2.39286413303;SPIB:2.3460863717;ELF1,2,4:2.3290932897;FOXO1,3,4:2.15317458973;NANOG{mouse}:2.07887539572;T:2.03156172799;RUNX1..3:2.00524380578;FOXD3:1.98139227345;FOX{D1,D2}:1.88966458868;DMAP1_NCOR{1,2}_SMARC:1.79881857898;FOXP3:1.68664566568;TLX2:1.63088489865;FOX{F1,F2,J1}:1.58851372852;SPZ1:1.58299606607;STAT5{A,B}:1.4268013472;IRF7:1.40310251564;STAT1,3:1.34478428014;CEBPA,B_DDIT3:1.30346838132;ZNF148:1.25476473459;IRF1,2:1.11624146203;PAX3,7:1.09027965;PAX2:1.08083733554;TFAP4:1.07415046324;TGIF1:1.05845323794;EP300:1.00072596375;FOXN1:0.996717209766;STAT2,4,6:0.936162037659;HMX1:0.890594385202;RXRA_VDR{dimer}:0.853792038974;POU5F1:0.801682200415;FOX{I1,J2}:0.79479946596;POU2F1..3:0.730666895484;SMAD1..7,9:0.70171510068;PDX1:0.660999780983;IKZF2:0.660019510277;NFIX:0.650269383101;TFCP2:0.622749130761;NFATC1..3:0.618465627182;MYOD1:0.596914756869;NFE2L2:0.57187386358;FOXA2:0.565507950529;SREBF1,2:0.529940339357;NKX3-2:0.528160348758;MYFfamily:0.481123245062;NR1H4:0.469789747113;CDX1,2,4:0.450778769767;RFX2..5_RFXANK_RFXAP:0.41493197828;RBPJ:0.395958188343;ZNF423:0.383120642532;ZEB1:0.379554858702;NKX2-2,8:0.367883838197;RREB1:0.334703586046;NFIL3:0.321082386238;ATF5_CREB3:0.281263951434;ZNF238:0.258714300331;CRX:0.257326644057;ALX1:0.255775977009;MYB:0.251691641234;HBP1_HMGB_SSRP1_UBTF:0.227180516158;TOPORS:0.224859288676;MAZ:0.21116844939;HLF:0.206583558206;MZF1:0.183862574288;PPARG:0.166955680183;CUX2:0.154393993749;EVI1:0.14982814796;NFE2L1:0.145520126327;NFKB1_REL_RELA:0.121889260462;SNAI1..3:0.0918896797872;DBP:0.0640179160343;TAL1_TCF{3,4,12}:0.0607260992653;GATA4:0.0522574330687;NFE2:0.051221580275;BPTF:0.0399317053532;BREu{core}:0.0246247781541;LMO2:0.00259817871074;NKX3-1:-0.00815209023931;SRF:-0.022138435143;CREB1:-0.156681720341;XCPE1{core}:-0.19458065194;SP1:-0.199823027826;OCT4_SOX2{dimer}:-0.252044971947;GLI1..3:-0.271889886513;ELK1,4_GABP{A,B1}:-0.290993426519;RORA:-0.367434145004;AIRE:-0.378574400158;REST:-0.397188224137;ATF2:-0.40331534945;BACH2:-0.429155957581;POU1F1:-0.434785459468;KLF4:-0.444941626349;NR6A1:-0.45112124262;FOSL2:-0.466027493549;LEF1_TCF7_TCF7L1,2:-0.474828010985;ADNP_IRX_SIX_ZHX:-0.501610253892;PRDM1:-0.524321543929;ALX4:-0.526867332509;FOXP1:-0.538632863987;NHLH1,2:-0.552177051943;RFX1:-0.552794588628;PATZ1:-0.563540520522;TBX4,5:-0.58524976347;HIF1A:-0.606790121058;ZFP161:-0.60949432679;NR5A1,2:-0.613302111674;NKX2-1,4:-0.615457679952;ESR1:-0.61621362581;ATF4:-0.634162534144;MTE{core}:-0.640633462821;HMGA1,2:-0.662270171222;PRRX1,2:-0.667884289286;MAFB:-0.669008151875;FOS_FOS{B,L1}_JUN{B,D}:-0.674627346755;NR3C1:-0.675070864261;MEF2{A,B,C,D}:-0.69921139241;HNF4A_NR2F1,2:-0.708128351617;GTF2I:-0.72855156502;HOXA9_MEIS1:-0.739541768574;ZNF143:-0.744329727862;AR:-0.750277652942;JUN:-0.764445451451;NRF1:-0.767069813223;HNF1A:-0.788404042611;MTF1:-0.806160735051;TLX1..3_NFIC{dimer}:-0.807964878726;GCM1,2:-0.845721466856;NFY{A,B,C}:-0.8496969848;YY1:-0.859835269009;XBP1:-0.907281864773;SOX2:-0.91539355389;HIC1:-0.928444167161;TFAP2B:-0.931741424613;ARID5B:-0.943111902577;FOXQ1:-0.954901891478;EGR1..3:-0.957673328706;EN1,2:-0.959980441753;ZBTB16:-0.962942071864;PBX1:-0.966629652029;TFAP2{A,C}:-0.970473189652;PAX5:-0.973426752617;TBP:-0.991830672513;NKX6-1,2:-1.02626510605;MED-1{core}:-1.0457392823;PAX6:-1.04711237438;RXR{A,B,G}:-1.06376789977;PITX1..3:-1.08490517988;NKX2-3_NKX2-5:-1.09821258743;E2F1..5:-1.17724581771;POU6F1:-1.20186720142;EBF1:-1.22701576227;NANOG:-1.23718586438;HES1:-1.24190591592;SOX{8,9,10}:-1.25281838251;VSX1,2:-1.29591918577;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.29616990421;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.2996099046;MYBL2:-1.30235895254;GZF1:-1.32555586701;TP53:-1.34784928939;ZBTB6:-1.35495840394;GFI1:-1.35711692315;PAX4:-1.37051181095;UFEwm:-1.37350188532;AHR_ARNT_ARNT2:-1.38814729929;SOX5:-1.39096089032;LHX3,4:-1.4003741195;HAND1,2:-1.46573890415;FOXL1:-1.56511507205;FOXM1:-1.62844783121;GFI1B:-1.62872407897;POU3F1..4:-1.63000470793;ZNF384:-1.63416704945;bHLH_family:-1.66820134364;TEAD1:-1.6936194536;PAX1,9:-1.74042500615;HSF1,2:-1.78247307525;PAX8:-1.81547346415;ATF6:-1.82771463283;ONECUT1,2:-1.85555539974;HOX{A5,B5}:-1.89440459227;HOX{A6,A7,B6,B7}:-1.93401594619;ESRRA:-1.96968137692;ZIC1..3:-1.96989058151;GTF2A1,2:-1.97476705869;TFDP1:-2.09033274234;SOX17:-2.09213753715;HOX{A4,D4}:-2.33493553979;TEF:-2.60428047899;CDC5L:-2.61308799761;IKZF1:-2.85582762568 | |top_motifs=GATA6:4.20543272298;ETS1,2:2.49966190304;SPI1:2.39286413303;SPIB:2.3460863717;ELF1,2,4:2.3290932897;FOXO1,3,4:2.15317458973;NANOG{mouse}:2.07887539572;T:2.03156172799;RUNX1..3:2.00524380578;FOXD3:1.98139227345;FOX{D1,D2}:1.88966458868;DMAP1_NCOR{1,2}_SMARC:1.79881857898;FOXP3:1.68664566568;TLX2:1.63088489865;FOX{F1,F2,J1}:1.58851372852;SPZ1:1.58299606607;STAT5{A,B}:1.4268013472;IRF7:1.40310251564;STAT1,3:1.34478428014;CEBPA,B_DDIT3:1.30346838132;ZNF148:1.25476473459;IRF1,2:1.11624146203;PAX3,7:1.09027965;PAX2:1.08083733554;TFAP4:1.07415046324;TGIF1:1.05845323794;EP300:1.00072596375;FOXN1:0.996717209766;STAT2,4,6:0.936162037659;HMX1:0.890594385202;RXRA_VDR{dimer}:0.853792038974;POU5F1:0.801682200415;FOX{I1,J2}:0.79479946596;POU2F1..3:0.730666895484;SMAD1..7,9:0.70171510068;PDX1:0.660999780983;IKZF2:0.660019510277;NFIX:0.650269383101;TFCP2:0.622749130761;NFATC1..3:0.618465627182;MYOD1:0.596914756869;NFE2L2:0.57187386358;FOXA2:0.565507950529;SREBF1,2:0.529940339357;NKX3-2:0.528160348758;MYFfamily:0.481123245062;NR1H4:0.469789747113;CDX1,2,4:0.450778769767;RFX2..5_RFXANK_RFXAP:0.41493197828;RBPJ:0.395958188343;ZNF423:0.383120642532;ZEB1:0.379554858702;NKX2-2,8:0.367883838197;RREB1:0.334703586046;NFIL3:0.321082386238;ATF5_CREB3:0.281263951434;ZNF238:0.258714300331;CRX:0.257326644057;ALX1:0.255775977009;MYB:0.251691641234;HBP1_HMGB_SSRP1_UBTF:0.227180516158;TOPORS:0.224859288676;MAZ:0.21116844939;HLF:0.206583558206;MZF1:0.183862574288;PPARG:0.166955680183;CUX2:0.154393993749;EVI1:0.14982814796;NFE2L1:0.145520126327;NFKB1_REL_RELA:0.121889260462;SNAI1..3:0.0918896797872;DBP:0.0640179160343;TAL1_TCF{3,4,12}:0.0607260992653;GATA4:0.0522574330687;NFE2:0.051221580275;BPTF:0.0399317053532;BREu{core}:0.0246247781541;LMO2:0.00259817871074;NKX3-1:-0.00815209023931;SRF:-0.022138435143;CREB1:-0.156681720341;XCPE1{core}:-0.19458065194;SP1:-0.199823027826;OCT4_SOX2{dimer}:-0.252044971947;GLI1..3:-0.271889886513;ELK1,4_GABP{A,B1}:-0.290993426519;RORA:-0.367434145004;AIRE:-0.378574400158;REST:-0.397188224137;ATF2:-0.40331534945;BACH2:-0.429155957581;POU1F1:-0.434785459468;KLF4:-0.444941626349;NR6A1:-0.45112124262;FOSL2:-0.466027493549;LEF1_TCF7_TCF7L1,2:-0.474828010985;ADNP_IRX_SIX_ZHX:-0.501610253892;PRDM1:-0.524321543929;ALX4:-0.526867332509;FOXP1:-0.538632863987;NHLH1,2:-0.552177051943;RFX1:-0.552794588628;PATZ1:-0.563540520522;TBX4,5:-0.58524976347;HIF1A:-0.606790121058;ZFP161:-0.60949432679;NR5A1,2:-0.613302111674;NKX2-1,4:-0.615457679952;ESR1:-0.61621362581;ATF4:-0.634162534144;MTE{core}:-0.640633462821;HMGA1,2:-0.662270171222;PRRX1,2:-0.667884289286;MAFB:-0.669008151875;FOS_FOS{B,L1}_JUN{B,D}:-0.674627346755;NR3C1:-0.675070864261;MEF2{A,B,C,D}:-0.69921139241;HNF4A_NR2F1,2:-0.708128351617;GTF2I:-0.72855156502;HOXA9_MEIS1:-0.739541768574;ZNF143:-0.744329727862;AR:-0.750277652942;JUN:-0.764445451451;NRF1:-0.767069813223;HNF1A:-0.788404042611;MTF1:-0.806160735051;TLX1..3_NFIC{dimer}:-0.807964878726;GCM1,2:-0.845721466856;NFY{A,B,C}:-0.8496969848;YY1:-0.859835269009;XBP1:-0.907281864773;SOX2:-0.91539355389;HIC1:-0.928444167161;TFAP2B:-0.931741424613;ARID5B:-0.943111902577;FOXQ1:-0.954901891478;EGR1..3:-0.957673328706;EN1,2:-0.959980441753;ZBTB16:-0.962942071864;PBX1:-0.966629652029;TFAP2{A,C}:-0.970473189652;PAX5:-0.973426752617;TBP:-0.991830672513;NKX6-1,2:-1.02626510605;MED-1{core}:-1.0457392823;PAX6:-1.04711237438;RXR{A,B,G}:-1.06376789977;PITX1..3:-1.08490517988;NKX2-3_NKX2-5:-1.09821258743;E2F1..5:-1.17724581771;POU6F1:-1.20186720142;EBF1:-1.22701576227;NANOG:-1.23718586438;HES1:-1.24190591592;SOX{8,9,10}:-1.25281838251;VSX1,2:-1.29591918577;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.29616990421;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.2996099046;MYBL2:-1.30235895254;GZF1:-1.32555586701;TP53:-1.34784928939;ZBTB6:-1.35495840394;GFI1:-1.35711692315;PAX4:-1.37051181095;UFEwm:-1.37350188532;AHR_ARNT_ARNT2:-1.38814729929;SOX5:-1.39096089032;LHX3,4:-1.4003741195;HAND1,2:-1.46573890415;FOXL1:-1.56511507205;FOXM1:-1.62844783121;GFI1B:-1.62872407897;POU3F1..4:-1.63000470793;ZNF384:-1.63416704945;bHLH_family:-1.66820134364;TEAD1:-1.6936194536;PAX1,9:-1.74042500615;HSF1,2:-1.78247307525;PAX8:-1.81547346415;ATF6:-1.82771463283;ONECUT1,2:-1.85555539974;HOX{A5,B5}:-1.89440459227;HOX{A6,A7,B6,B7}:-1.93401594619;ESRRA:-1.96968137692;ZIC1..3:-1.96989058151;GTF2A1,2:-1.97476705869;TFDP1:-2.09033274234;SOX17:-2.09213753715;HOX{A4,D4}:-2.33493553979;TEF:-2.60428047899;CDC5L:-2.61308799761;IKZF1:-2.85582762568 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12179-129A1;search_select_hide=table117:FF:12179-129A1 | |||
}} | }} | ||
Latest revision as of 18:33, 4 June 2020
| Name: | Whole blood (ribopure), donor090309, donation1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11675,RDhi10000 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11675
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11675
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.177 |
| 10 | 10 | 0.102 |
| 100 | 100 | 0.513 |
| 101 | 101 | 0.276 |
| 102 | 102 | 0.551 |
| 103 | 103 | 0.0927 |
| 104 | 104 | 0.709 |
| 105 | 105 | 0.206 |
| 106 | 106 | 0.0465 |
| 107 | 107 | 0.728 |
| 108 | 108 | 0.81 |
| 109 | 109 | 0.112 |
| 11 | 11 | 0.0905 |
| 110 | 110 | 0.365 |
| 111 | 111 | 0.533 |
| 112 | 112 | 0.0825 |
| 113 | 113 | 0.201 |
| 114 | 114 | 0.0583 |
| 115 | 115 | 0.31 |
| 116 | 116 | 0.959 |
| 117 | 117 | 0.0444 |
| 118 | 118 | 0.319 |
| 119 | 119 | 0.474 |
| 12 | 12 | 0.364 |
| 120 | 120 | 0.586 |
| 121 | 121 | 0.703 |
| 122 | 122 | 0.238 |
| 123 | 123 | 0.267 |
| 124 | 124 | 0.0311 |
| 125 | 125 | 0.14 |
| 126 | 126 | 0.217 |
| 127 | 127 | 0.218 |
| 128 | 128 | 0.0346 |
| 129 | 129 | 0.593 |
| 13 | 13 | 0.864 |
| 130 | 130 | 0.607 |
| 131 | 131 | 0.854 |
| 132 | 132 | 0.536 |
| 133 | 133 | 0.317 |
| 134 | 134 | 0.871 |
| 135 | 135 | 0.366 |
| 136 | 136 | 0.893 |
| 137 | 137 | 0.00644 |
| 138 | 138 | 0.0777 |
| 139 | 139 | 0.0302 |
| 14 | 14 | 0.165 |
| 140 | 140 | 0.356 |
| 141 | 141 | 0.502 |
| 142 | 142 | 0.983 |
| 143 | 143 | 0.00192 |
| 144 | 144 | 0.599 |
| 145 | 145 | 0.353 |
| 146 | 146 | 0.731 |
| 147 | 147 | 0.146 |
| 148 | 148 | 0.206 |
| 149 | 149 | 0.449 |
| 15 | 15 | 0.028 |
| 150 | 150 | 0.836 |
| 151 | 151 | 0.271 |
| 152 | 152 | 0.256 |
| 153 | 153 | 0.516 |
| 154 | 154 | 0.89 |
| 155 | 155 | 0.217 |
| 156 | 156 | 0.708 |
| 157 | 157 | 0.234 |
| 158 | 158 | 0.251 |
| 159 | 159 | 0.258 |
| 16 | 16 | 0.444 |
| 160 | 160 | 0.762 |
| 161 | 161 | 0.382 |
| 162 | 162 | 0.664 |
| 163 | 163 | 0.516 |
| 164 | 164 | 0.257 |
| 165 | 165 | 0.147 |
| 166 | 166 | 0.798 |
| 167 | 167 | 0.53 |
| 168 | 168 | 0.0739 |
| 169 | 169 | 0.0175 |
| 17 | 17 | 0.405 |
| 18 | 18 | 0.433 |
| 19 | 19 | 0.301 |
| 2 | 2 | 0.205 |
| 20 | 20 | 0.535 |
| 21 | 21 | 0.492 |
| 22 | 22 | 0.148 |
| 23 | 23 | 0.0625 |
| 24 | 24 | 0.017 |
| 25 | 25 | 0.194 |
| 26 | 26 | 0.238 |
| 27 | 27 | 0.0805 |
| 28 | 28 | 0.469 |
| 29 | 29 | 0.41 |
| 3 | 3 | 0.0893 |
| 30 | 30 | 0.835 |
| 31 | 31 | 0.455 |
| 32 | 32 | 0.75 |
| 33 | 33 | 0.611 |
| 34 | 34 | 0.199 |
| 35 | 35 | 0.291 |
| 36 | 36 | 0.52 |
| 37 | 37 | 0.148 |
| 38 | 38 | 0.304 |
| 39 | 39 | 0.939 |
| 4 | 4 | 0.881 |
| 40 | 40 | 0.405 |
| 41 | 41 | 0.0452 |
| 42 | 42 | 0.29 |
| 43 | 43 | 0.152 |
| 44 | 44 | 0.358 |
| 45 | 45 | 0.346 |
| 46 | 46 | 0.135 |
| 47 | 47 | 0.174 |
| 48 | 48 | 0.249 |
| 49 | 49 | 0.161 |
| 5 | 5 | 0.192 |
| 50 | 50 | 0.941 |
| 51 | 51 | 0.397 |
| 52 | 52 | 0.453 |
| 53 | 53 | 0.168 |
| 54 | 54 | 0.321 |
| 55 | 55 | 0.0727 |
| 56 | 56 | 0.253 |
| 57 | 57 | 0.91 |
| 58 | 58 | 0.064 |
| 59 | 59 | 0.0433 |
| 6 | 6 | 0.766 |
| 60 | 60 | 0.0466 |
| 61 | 61 | 0.267 |
| 62 | 62 | 0.0129 |
| 63 | 63 | 0.546 |
| 64 | 64 | 0.369 |
| 65 | 65 | 0.154 |
| 66 | 66 | 0.562 |
| 67 | 67 | 0.247 |
| 68 | 68 | 0.54 |
| 69 | 69 | 0.461 |
| 7 | 7 | 0.172 |
| 70 | 70 | 0.0346 |
| 71 | 71 | 0.111 |
| 72 | 72 | 0.209 |
| 73 | 73 | 0.261 |
| 74 | 74 | 0.562 |
| 75 | 75 | 0.0999 |
| 76 | 76 | 0.552 |
| 77 | 77 | 0.568 |
| 78 | 78 | 0.367 |
| 79 | 79 | 0.956 |
| 8 | 8 | 0.431 |
| 80 | 80 | 0.0096 |
| 81 | 81 | 0.332 |
| 82 | 82 | 0.0313 |
| 83 | 83 | 0.482 |
| 84 | 84 | 0.548 |
| 85 | 85 | 0.162 |
| 86 | 86 | 0.114 |
| 87 | 87 | 0.527 |
| 88 | 88 | 0.543 |
| 89 | 89 | 0.188 |
| 9 | 9 | 0.159 |
| 90 | 90 | 0.0443 |
| 91 | 91 | 0.514 |
| 92 | 92 | 0.0644 |
| 93 | 93 | 0.203 |
| 94 | 94 | 0.115 |
| 95 | 95 | 0.477 |
| 96 | 96 | 0.104 |
| 97 | 97 | 0.765 |
| 98 | 98 | 0.0629 |
| 99 | 99 | 0.494 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11675
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000281 human whole blood sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000178 (blood)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0010053 (human blood - adult sample)
0000004 (tissue sample)
0000281 (human whole blood sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
