FF:12180-129A2: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (25 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=RNA-Seq@SAMD00013677 | ||
|ancestors_in_cell_lineage_facet= | |accession_numbers=CAGE;DRX008530;DRR009402;DRZ000827;DRZ002212;DRZ012177;DRZ013562!RNA-Seq;DRX012354;DRR013802;DRZ003003; | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000178,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0010053,FF:0000004,FF:0000281 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation2.CNhs11671.12180-129A2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation2.CNhs11671.12180-129A2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation2.CNhs11671.12180-129A2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation2.CNhs11671.12180-129A2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation2.CNhs11671.12180-129A2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12180-129A2 | |id=FF:12180-129A2 | ||
|is_a=EFO:0002091;;FF:0000002;;FF: | |is_a=EFO:0002091;;FF:0000002;;FF:0000281 | ||
|is_obsolete= | |||
|library_id=CNhs11671!RDhi10001 | |||
|library_id_phase_based=2:CNhs11671 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12180 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12180 | |||
|name=Whole blood (ribopure), donor090309, donation2 | |name=Whole blood (ribopure), donor090309, donation2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11671,LSID808,release008,COMPLETED | |profile_hcage=CNhs11671,LSID808,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.402995950793333,0,0,0,0,0,-0.160318030086386,0,0.242878644277485,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0.683334013471732,0,0,0.455047765001075,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.300809718524262,0,0.246655432029025,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.683334013471732,0,-0.0584603234857437,0.246655432029025,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0.246655432029025,0,0,0.402995950793333,0,0,0,0.190723345804607,0,0,0,0,0,0,-0.136302090704574,0,0,0,-0.0584468268118252,-0.211197402695869,0,0,0,0,0.148620080791319,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0269541220920517,0,0,0,0.0567395443069107,0.463194144482707,0,0,-0.0179926842270991,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.148620080791319,0,0,0,0,0.402995950793333,0,0,0,0,0,0,-0.000523443256539136,0,0.845656076781832,0.259480808269861,0,0,-0.0856120801737046,0,0,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,0.212239711585168,0,0.167408945586356,-0.0683442610773682,0,0,0,0,-0.146912953319811,0,0.562454529677991,-0.0827201683234173,0,-0.534879270716946,0.190942935247843,0,0,0,-0.375928512060788,-1.01837891339289,0,0,0.0797181236447925,0.287067341537892,0,0,-0.391044581551635,0,0.166996399531319,-0.248868050382253,0,-0.00258948536663944,0,0,0,0,0,0,0,0,0,0,0,0.065834249193076,0.190723345804607,0,0,0,-0.0633584109605552,0.137947176391494,0,0,-0.373286155956567,-0.350736013296859,0.0368554295702791,-0.521199229853467,0,0.86679871088902,0.248915103597661,0.302615216565832,-0.360361366253124,-0.147401849371139,-0.189981719549847,0,-0.236779029411599,-0.383276678320679,-0.0763475987676525,0.0130674502355888,-0.109891670086186,-1.2314085082871,0.250725447939207,0,0,0,0.404044650661504,0,0,-0.490114714476774,-0.0467249722274536,-0.67098743647571,0.206817264138423,-0.55122821730723,0.162683170739427,-0.0395325284566706,0.0602754895869807,-0.0953235572975452,-0.4215723249037,0,0.683334013471732,-0.0768734697077316,-0.163092724943371,-0.539256675078297,0.91410953605574,0,0.124393313538522,0.178311170951657,0.123327716014513,-0.689395747735381,-0.181921449515901,0,0,-0.0610652883878365,0,0,0,0,0,-0.0781818996518655,0.82551783638303,0.514387098258261,0,0.0364493873004855,-0.152945664938164,0.12886538216363,0,-0.0410027035563474,-0.125204166764013,0,0.110362146197097,0,-0.144820478209494,0.89697703371812,0.0816647356900225,-0.422394805391737,-0.0584468268118252,0.415619883999152,0.0388620080634803,-0.327999846112942,-0.271227922306651,-0.186276944877714,-0.0881268324752877,-0.00666796769307765,-0.136302090704574,0.914140771044708,-0.0223216103291304,0.012029352369737,0,0.090252319825967,0,0.14046305328271,0,0.43977616486697,-0.54043375147324,0.568272636069079,0.343492387559991,0,-0.161255664620324,-0.104796924302242,0,-0.254698803468479,0,0.246655432029025,-0.150367083334639,-0.697695966512583,-0.0101524524679225,0.329427503419356,0,-0.790080158389657,0,0,-0.040599467744253,0.167519913028944,0,0.611873036195614,0.512494625591479,0.646740850344879,0.492399701914569,0,0,-0.645700337992725,0,0,-0.60592806381803,0,-0.619783323958633,-0.00667090945773038,0,0.014704906560257,0,0,0.0691276660638497,1.03902858384771,0.357947504277133,0,0,-0.126553580584311,-0.116628112990133,0,0.123327716014513,0,0,0,0.187698921043669,0,0,0,0,0,0.296796168821142,-0.354833330216448,0,-0.0115505782580068,0,0,0,0,0,0,0,0,-0.655496918622574,-0.0204606092228201,-0.12301741567642,0,0,0,0,0.0309320294755507,0.599705407747055,0.517711942483575,-0.131862706497632,0,0.123327716014513,0,0,0.160514442239814,0,0.246655432029025,0,0,-0.057730457053664,0.12027120156397,0,0,0,-0.27695440160179,0,0,0,0,0.261356080496141,0,0,-0.228934222593047,0,0.302363749540741,-0.0815818795468414,0,0.061342704585938,0.302151849648833,-1.30962034064846,0,0,-0.261347131789888,0,0,-0.0283823109834822,0.164285209063359,0,0,0,0,0,0,0,0,0.188681438393578,0,0,0,0,0,0,0,0,0,0,0,0.292085632130936,-0.0922240566585104,-0.0640596705171081,0,0,0,0,0,0,0.300719668332276,0.21179226564162,0,0.246655432029025,0,0,0,0,0,0,0.136944835686261,0,0,0,0,0,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0,0.125633818599819,0,0,0,0,0,0,0,0,0,0.402995950793333,0,0,0,0.123336345993578,0.371191531311369,0,0,0,0,0,0,0,0.242878644277485,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.51317200079918,0,0,0,0,0,-0.232628352633041,0,0,0,0,0,0,0.17015755136814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0962259712900034,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,-0.287976840656709,-0.283220399823148,-0.155126029197983,0,0,0,0.0689421435320575,0.683334013471732,0,-0.0650738225586148,0.246655432029025,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,1.43971297590911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455047765001075,0,0,0,0,0.246655432029025,0,0,0,0,0,0,0.123327716014513,0,0,0,0,0,0,0,0,0,0,0,0.258855971241787,0,0,0,0,0,0,0,0,0,0,0,0.16748661212125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123327716014513,0,0,0,0,-0.0800184682686384,0,0,0,0.589855740184735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246655432029025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246655432029025,0,0.662939616198651,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.318619318563306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.303848610486687,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.0358992182126595,0,0,0,0,0,0,0,0,0,0,0.123327716014513,0,0,-0.253610608288505,0,0,0.229897052946829,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246655432029025,0,0,0,0,0,0.246655432029025,0,0,0,0,0,0,0.258855971241787,0.0990424285166876,0.463194144482707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201497975396667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.071427386408819,0,0,0.246655432029025,0,0,0,0,0,0,0,0.683334013471732,0,0,0,0,0,0,0.304185387674752,0,0,0,0,0,0.201497975396667,0,0,0,0,0,0.093630793641837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258855971241787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0629375947221278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402995950793333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123327716014513,0,0,0,0,0,0,0,0,0,0,0,0.402995950793333,0,0,0,0,0,0.0539082441841034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324825691411179,0,0,0,0,0,0,0,0,0.304185387674752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0339086982719944,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0.19271977613413,0,0,0,0,0,0,0,0,0,0,0,0.517711942483575,0,0,0,0,-0.0317165860483832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123327716014513,0,0,0,0.166913433364047,0,0,0,0,0.246655432029025,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747242659813806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123327716014513,0,0,0,0.073389733492926,0,0,0,0,0,0,0,0,0,0,-0.0412500915278073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246655432029025,-0.0304168522029338,0,0,-0.0422874684771159,0,0.00140506922334062,0.045299658680276,0,0,0,0,0,-1.64455985450784e-05,0,0,0,0,0,0,0,0,0,0,-0.0400762477245316,0,0,0.109316929605131,0,0,0,0,0,0,0.246655432029025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46717056449084,0,-0.116498113793827,-0.397074688522015,0,0,-0.0907676196164498,0,-0.0306427945693274,-0.0367311208382308,0,0,-0.174992895090299,-0.628012661084615,0,0,0.201497975396667,0,0,0,0,0,0,0,0,0.246655432029025,0,0.123327716014513,0,0,0,0,0.189796485866426,0.413858377877163,0,0.138875688133151,0,0,-0.0781053106522872,0,0,0,-0.0959594073735869 | |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=14.3 | |rna_weight_ug=14.3 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.93601268955121e-255!GO:0005737;cytoplasm;1.25357820884418e-125!GO:0043227;membrane-bound organelle;1.25357820884418e-125!GO:0043231;intracellular membrane-bound organelle;2.11092470412472e-125!GO:0043226;organelle;4.95587421230255e-119!GO:0043229;intracellular organelle;2.2988191424242e-118!GO:0044444;cytoplasmic part;3.38029799976275e-82!GO:0044422;organelle part;3.60658993063426e-71!GO:0044446;intracellular organelle part;7.91553975740772e-70!GO:0044237;cellular metabolic process;1.89977474375391e-63!GO:0032991;macromolecular complex;2.13966569157279e-63!GO:0043170;macromolecule metabolic process;1.0820943889732e-61!GO:0044238;primary metabolic process;2.34843056552174e-61!GO:0005515;protein binding;1.86312438535316e-59!GO:0005634;nucleus;1.78385549920672e-55!GO:0003723;RNA binding;1.33119272101904e-49!GO:0044428;nuclear part;6.13269292399433e-48!GO:0030529;ribonucleoprotein complex;5.1463526984972e-47!GO:0019538;protein metabolic process;2.51430956877482e-42!GO:0033036;macromolecule localization;4.5699285154737e-41!GO:0015031;protein transport;1.00401214051653e-40!GO:0043233;organelle lumen;2.24239345994239e-40!GO:0031974;membrane-enclosed lumen;2.24239345994239e-40!GO:0045184;establishment of protein localization;1.30448414751652e-39!GO:0044267;cellular protein metabolic process;4.14939414454629e-39!GO:0044260;cellular macromolecule metabolic process;5.94641998727141e-39!GO:0008104;protein localization;5.2424799971334e-38!GO:0005829;cytosol;2.17978915147351e-36!GO:0043283;biopolymer metabolic process;3.03506864262514e-36!GO:0006412;translation;2.24610138396951e-34!GO:0043234;protein complex;4.61439658543668e-34!GO:0006396;RNA processing;1.86028681936434e-32!GO:0016071;mRNA metabolic process;6.20892710810714e-32!GO:0031981;nuclear lumen;1.31461428130086e-31!GO:0010467;gene expression;1.65743145440615e-31!GO:0031090;organelle membrane;1.22156109099663e-29!GO:0005739;mitochondrion;2.5832532614898e-28!GO:0008380;RNA splicing;2.44700421864283e-27!GO:0006397;mRNA processing;4.10711125026962e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.19050526145383e-26!GO:0016043;cellular component organization and biogenesis;7.16397815639048e-26!GO:0009059;macromolecule biosynthetic process;8.21838238216591e-26!GO:0046907;intracellular transport;6.30318464164287e-25!GO:0006886;intracellular protein transport;8.26067914242815e-25!GO:0005840;ribosome;6.06722027925694e-24!GO:0044445;cytosolic part;3.56178666853731e-23!GO:0012501;programmed cell death;3.82862899769562e-23!GO:0006915;apoptosis;4.03248793924918e-23!GO:0031967;organelle envelope;5.91037047538637e-23!GO:0031975;envelope;7.88251766922882e-23!GO:0008219;cell death;3.71687534908706e-22!GO:0016265;death;3.71687534908706e-22!GO:0044249;cellular biosynthetic process;4.66053141865604e-22!GO:0009058;biosynthetic process;5.093746259346e-22!GO:0003735;structural constituent of ribosome;1.12166776338536e-21!GO:0005654;nucleoplasm;1.3110235295311e-21!GO:0065003;macromolecular complex assembly;1.73971078146338e-21!GO:0033279;ribosomal subunit;1.16725669184402e-20!GO:0044429;mitochondrial part;2.16817473235698e-20!GO:0051649;establishment of cellular localization;6.28454736353056e-20!GO:0051641;cellular localization;9.9864931591135e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.70737832050236e-19!GO:0005681;spliceosome;7.82895473659058e-19!GO:0022607;cellular component assembly;9.28533611415431e-19!GO:0006512;ubiquitin cycle;4.47241738163176e-18!GO:0044451;nucleoplasm part;5.3619624273889e-18!GO:0000166;nucleotide binding;5.586502622385e-18!GO:0043412;biopolymer modification;9.50306417151296e-18!GO:0008134;transcription factor binding;1.89663418621632e-17!GO:0044265;cellular macromolecule catabolic process;2.09609195319961e-17!GO:0016192;vesicle-mediated transport;8.99964259216344e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.87888867629834e-16!GO:0042981;regulation of apoptosis;2.26350425946784e-16!GO:0006464;protein modification process;3.08283919777409e-16!GO:0043067;regulation of programmed cell death;3.53366528647214e-16!GO:0002376;immune system process;3.73038190058973e-16!GO:0006119;oxidative phosphorylation;2.19441614399566e-15!GO:0016462;pyrophosphatase activity;2.46500333535616e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.75381031729731e-15!GO:0017111;nucleoside-triphosphatase activity;3.09377751973364e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;3.26619518394692e-15!GO:0003676;nucleic acid binding;5.52925706021938e-15!GO:0016070;RNA metabolic process;7.07130196472905e-15!GO:0005740;mitochondrial envelope;7.52330707521776e-15!GO:0043687;post-translational protein modification;9.27420176550757e-15!GO:0006996;organelle organization and biogenesis;1.29027422235641e-14!GO:0006259;DNA metabolic process;1.34913660261832e-14!GO:0031966;mitochondrial membrane;2.36359500482826e-14!GO:0019866;organelle inner membrane;6.78605635786238e-14!GO:0016874;ligase activity;8.65737376445577e-14!GO:0016604;nuclear body;9.07585705790067e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;9.26219839613948e-14!GO:0019941;modification-dependent protein catabolic process;1.25171744420603e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.25171744420603e-13!GO:0032553;ribonucleotide binding;1.73148450735862e-13!GO:0032555;purine ribonucleotide binding;1.73148450735862e-13!GO:0044257;cellular protein catabolic process;1.98809421451976e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.16766423504014e-13!GO:0043285;biopolymer catabolic process;2.38878310262887e-13!GO:0005794;Golgi apparatus;2.81445518649816e-13!GO:0009057;macromolecule catabolic process;3.07095739991597e-13!GO:0007243;protein kinase cascade;3.32982003683555e-13!GO:0017076;purine nucleotide binding;6.1077612953806e-13!GO:0022618;protein-RNA complex assembly;9.52553354047941e-13!GO:0044248;cellular catabolic process;2.72132355397824e-12!GO:0005768;endosome;3.12859569921227e-12!GO:0048770;pigment granule;3.16876269774589e-12!GO:0042470;melanosome;3.16876269774589e-12!GO:0005743;mitochondrial inner membrane;3.46449707808554e-12!GO:0006605;protein targeting;4.00036727250616e-12!GO:0016607;nuclear speck;4.8170306727546e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.95296454700225e-12!GO:0007242;intracellular signaling cascade;5.03492902353343e-12!GO:0006913;nucleocytoplasmic transport;1.12531577961767e-11!GO:0012505;endomembrane system;1.37533549830587e-11!GO:0003712;transcription cofactor activity;1.42224706941352e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.55671004662869e-11!GO:0051169;nuclear transport;2.30750159855365e-11!GO:0015934;large ribosomal subunit;4.44630061220255e-11!GO:0006793;phosphorus metabolic process;4.52601907988937e-11!GO:0006796;phosphate metabolic process;4.52601907988937e-11!GO:0050794;regulation of cellular process;7.15112114704583e-11!GO:0006457;protein folding;7.1548057391027e-11!GO:0051246;regulation of protein metabolic process;7.48707435095117e-11!GO:0006955;immune response;1.11356329135147e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.40576235919327e-10!GO:0000502;proteasome complex (sensu Eukaryota);2.01667808263467e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.20849315612051e-10!GO:0005524;ATP binding;2.60443188791942e-10!GO:0016310;phosphorylation;2.68226812317272e-10!GO:0015935;small ribosomal subunit;2.76968848152123e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;3.8275440274066e-10!GO:0000375;RNA splicing, via transesterification reactions;3.8275440274066e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.8275440274066e-10!GO:0008135;translation factor activity, nucleic acid binding;3.98855140633872e-10!GO:0043069;negative regulation of programmed cell death;4.33408299332217e-10!GO:0032559;adenyl ribonucleotide binding;4.78191605589255e-10!GO:0005773;vacuole;6.2157138886058e-10!GO:0051186;cofactor metabolic process;6.23305609323066e-10!GO:0043066;negative regulation of apoptosis;6.32369760418763e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.37409622814776e-10!GO:0044455;mitochondrial membrane part;8.03246165751308e-10!GO:0030163;protein catabolic process;8.78619879940479e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;9.32409960039286e-10!GO:0065009;regulation of a molecular function;1.55335966281324e-09!GO:0048193;Golgi vesicle transport;1.63367374554581e-09!GO:0030554;adenyl nucleotide binding;1.89881428358785e-09!GO:0005730;nucleolus;2.05049299634767e-09!GO:0019787;small conjugating protein ligase activity;2.13536551504163e-09!GO:0008639;small protein conjugating enzyme activity;2.23385476294213e-09!GO:0006323;DNA packaging;3.53274415257956e-09!GO:0005746;mitochondrial respiratory chain;3.98299725149154e-09!GO:0043228;non-membrane-bound organelle;4.06667746424592e-09!GO:0043232;intracellular non-membrane-bound organelle;4.06667746424592e-09!GO:0005635;nuclear envelope;4.91532532424549e-09!GO:0016887;ATPase activity;5.05299387785467e-09!GO:0006916;anti-apoptosis;5.53318280572405e-09!GO:0004842;ubiquitin-protein ligase activity;5.66216276769498e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.90774677668568e-09!GO:0000323;lytic vacuole;7.17377493633453e-09!GO:0005764;lysosome;7.17377493633453e-09!GO:0005770;late endosome;9.89860777971593e-09!GO:0048523;negative regulation of cellular process;1.04253473380798e-08!GO:0016568;chromatin modification;1.57306198841391e-08!GO:0006446;regulation of translational initiation;1.73046378067573e-08!GO:0042623;ATPase activity, coupled;1.87865489514772e-08!GO:0003713;transcription coactivator activity;2.23593738808199e-08!GO:0050136;NADH dehydrogenase (quinone) activity;2.97707491475605e-08!GO:0003954;NADH dehydrogenase activity;2.97707491475605e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.97707491475605e-08!GO:0019829;cation-transporting ATPase activity;3.12594425985107e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.53905480556524e-08!GO:0050789;regulation of biological process;3.98364661689059e-08!GO:0016787;hydrolase activity;4.13501284260439e-08!GO:0003743;translation initiation factor activity;4.99525437686876e-08!GO:0051082;unfolded protein binding;4.99525437686876e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.11879449132682e-08!GO:0006366;transcription from RNA polymerase II promoter;6.32907317685262e-08!GO:0006413;translational initiation;7.15940619575969e-08!GO:0044440;endosomal part;1.18718650465418e-07!GO:0010008;endosome membrane;1.18718650465418e-07!GO:0009259;ribonucleotide metabolic process;1.20878279893273e-07!GO:0031980;mitochondrial lumen;1.20899780511699e-07!GO:0005759;mitochondrial matrix;1.20899780511699e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.23902089664441e-07!GO:0009150;purine ribonucleotide metabolic process;1.35735680446493e-07!GO:0042775;organelle ATP synthesis coupled electron transport;1.55854301664083e-07!GO:0042773;ATP synthesis coupled electron transport;1.55854301664083e-07!GO:0015986;ATP synthesis coupled proton transport;1.68127206625474e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.68127206625474e-07!GO:0016881;acid-amino acid ligase activity;1.88589567974072e-07!GO:0051276;chromosome organization and biogenesis;2.11282263486257e-07!GO:0006163;purine nucleotide metabolic process;2.51599568232084e-07!GO:0006950;response to stress;2.61286304742775e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.82749662770886e-07!GO:0030964;NADH dehydrogenase complex (quinone);3.01284357125557e-07!GO:0045271;respiratory chain complex I;3.01284357125557e-07!GO:0005747;mitochondrial respiratory chain complex I;3.01284357125557e-07!GO:0048519;negative regulation of biological process;3.02807368791305e-07!GO:0031965;nuclear membrane;3.33901383667267e-07!GO:0043065;positive regulation of apoptosis;3.37840835577716e-07!GO:0019222;regulation of metabolic process;3.46516469863161e-07!GO:0017038;protein import;3.71483633049105e-07!GO:0019899;enzyme binding;4.02942953737556e-07!GO:0009152;purine ribonucleotide biosynthetic process;4.50742624361031e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.78094969395525e-07!GO:0009056;catabolic process;5.62052864373266e-07!GO:0043068;positive regulation of programmed cell death;5.75386097672228e-07!GO:0007264;small GTPase mediated signal transduction;5.89696034014993e-07!GO:0065007;biological regulation;6.09727143621559e-07!GO:0005783;endoplasmic reticulum;7.36445473270223e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.6492190835567e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.6492190835567e-07!GO:0006164;purine nucleotide biosynthetic process;8.6270673496255e-07!GO:0009615;response to virus;8.72942846987792e-07!GO:0008565;protein transporter activity;1.02629709158143e-06!GO:0006417;regulation of translation;1.02729857217161e-06!GO:0003924;GTPase activity;1.02729857217161e-06!GO:0046034;ATP metabolic process;1.02989767955513e-06!GO:0006917;induction of apoptosis;1.07155032128849e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.11507559028416e-06!GO:0009260;ribonucleotide biosynthetic process;1.24927203233197e-06!GO:0006732;coenzyme metabolic process;1.28896553179397e-06!GO:0009967;positive regulation of signal transduction;1.29145671956978e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.35250832986725e-06!GO:0032446;protein modification by small protein conjugation;1.40914434535585e-06!GO:0005774;vacuolar membrane;1.40933708192452e-06!GO:0045321;leukocyte activation;1.48067134643152e-06!GO:0006461;protein complex assembly;1.63434395850111e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.66819751890463e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.66819751890463e-06!GO:0006754;ATP biosynthetic process;1.67909803706214e-06!GO:0006753;nucleoside phosphate metabolic process;1.67909803706214e-06!GO:0012502;induction of programmed cell death;1.69302186292505e-06!GO:0051170;nuclear import;1.81325083641709e-06!GO:0050657;nucleic acid transport;1.87922031125899e-06!GO:0051236;establishment of RNA localization;1.87922031125899e-06!GO:0050658;RNA transport;1.87922031125899e-06!GO:0050790;regulation of catalytic activity;1.93825964085755e-06!GO:0006403;RNA localization;2.19717739092144e-06!GO:0009141;nucleoside triphosphate metabolic process;2.42587023796392e-06!GO:0007049;cell cycle;2.46916773770636e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.49685559856657e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.49685559856657e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.49685559856657e-06!GO:0006974;response to DNA damage stimulus;2.52802543268453e-06!GO:0006606;protein import into nucleus;2.6911455159524e-06!GO:0016563;transcription activator activity;2.71416599567227e-06!GO:0044453;nuclear membrane part;2.79286279724653e-06!GO:0016567;protein ubiquitination;2.79559792738054e-06!GO:0002764;immune response-regulating signal transduction;2.82325010197097e-06!GO:0005793;ER-Golgi intermediate compartment;2.86090570947611e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.93821806373239e-06!GO:0004386;helicase activity;3.37824186797052e-06!GO:0008047;enzyme activator activity;3.49725477979052e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.53305311638225e-06!GO:0060090;molecular adaptor activity;3.87637442523604e-06!GO:0008026;ATP-dependent helicase activity;3.89993023294698e-06!GO:0008632;apoptotic program;4.90267738284315e-06!GO:0005765;lysosomal membrane;5.62671836328019e-06!GO:0005839;proteasome core complex (sensu Eukaryota);5.74802120504257e-06!GO:0044437;vacuolar part;5.82793383286256e-06!GO:0051188;cofactor biosynthetic process;6.36320346915117e-06!GO:0002757;immune response-activating signal transduction;7.11747293876737e-06!GO:0031326;regulation of cellular biosynthetic process;7.99752991362495e-06!GO:0001775;cell activation;7.99752991362495e-06!GO:0046649;lymphocyte activation;9.03786605835679e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.06666969851629e-06!GO:0048522;positive regulation of cellular process;9.66999433193585e-06!GO:0048475;coated membrane;1.1859219882223e-05!GO:0030117;membrane coat;1.1859219882223e-05!GO:0043566;structure-specific DNA binding;1.19294273443294e-05!GO:0002768;immune response-regulating cell surface receptor signaling pathway;1.21786838098979e-05!GO:0031902;late endosome membrane;1.54701980103496e-05!GO:0044431;Golgi apparatus part;1.58343150562583e-05!GO:0005525;GTP binding;1.58458820540371e-05!GO:0030120;vesicle coat;1.732505698412e-05!GO:0030662;coated vesicle membrane;1.732505698412e-05!GO:0030218;erythrocyte differentiation;1.99171873590383e-05!GO:0051028;mRNA transport;2.14832067252871e-05!GO:0009889;regulation of biosynthetic process;2.44472137849907e-05!GO:0000074;regulation of progression through cell cycle;2.96844849477223e-05!GO:0051726;regulation of cell cycle;3.01414288504245e-05!GO:0048518;positive regulation of biological process;3.08660817712594e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;3.09119970128556e-05!GO:0006333;chromatin assembly or disassembly;3.1393888438978e-05!GO:0009117;nucleotide metabolic process;3.1924067951975e-05!GO:0001772;immunological synapse;3.22698990063622e-05!GO:0004298;threonine endopeptidase activity;3.42214179473682e-05!GO:0030695;GTPase regulator activity;3.44925518510653e-05!GO:0000151;ubiquitin ligase complex;3.46132632748701e-05!GO:0045786;negative regulation of progression through cell cycle;3.51937289850273e-05!GO:0016564;transcription repressor activity;4.24030321429887e-05!GO:0007265;Ras protein signal transduction;4.24030321429887e-05!GO:0003697;single-stranded DNA binding;4.439582972471e-05!GO:0005643;nuclear pore;4.70844559257441e-05!GO:0031323;regulation of cellular metabolic process;4.94516309932298e-05!GO:0006401;RNA catabolic process;4.94516309932298e-05!GO:0044432;endoplasmic reticulum part;4.94773555773273e-05!GO:0006613;cotranslational protein targeting to membrane;5.18185335673914e-05!GO:0031982;vesicle;5.38766956799826e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.39182253814143e-05!GO:0000245;spliceosome assembly;5.46259440623759e-05!GO:0016197;endosome transport;5.56052627626746e-05!GO:0065004;protein-DNA complex assembly;5.59674419921054e-05!GO:0030097;hemopoiesis;5.64524508635552e-05!GO:0042254;ribosome biogenesis and assembly;5.79500988705231e-05!GO:0032940;secretion by cell;6.47481465480085e-05!GO:0045259;proton-transporting ATP synthase complex;6.59898989854302e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.65267750674273e-05!GO:0006888;ER to Golgi vesicle-mediated transport;7.37054533943488e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.48145329704019e-05!GO:0006281;DNA repair;7.93815657158947e-05!GO:0031324;negative regulation of cellular metabolic process;9.03617108804998e-05!GO:0030532;small nuclear ribonucleoprotein complex;0.000103461500508675!GO:0051336;regulation of hydrolase activity;0.000107803478480611!GO:0005070;SH3/SH2 adaptor activity;0.000107828576813358!GO:0051168;nuclear export;0.000109451135360099!GO:0042110;T cell activation;0.000112716301666205!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00011287914151291!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000125410274670879!GO:0015399;primary active transmembrane transporter activity;0.000125410274670879!GO:0003724;RNA helicase activity;0.000126474094240182!GO:0032561;guanyl ribonucleotide binding;0.000126474094240182!GO:0019001;guanyl nucleotide binding;0.000126474094240182!GO:0016740;transferase activity;0.00012885244794509!GO:0005096;GTPase activator activity;0.000129461643573551!GO:0016044;membrane organization and biogenesis;0.000131200101275771!GO:0009055;electron carrier activity;0.0001336283461434!GO:0031252;leading edge;0.000153304788612809!GO:0005798;Golgi-associated vesicle;0.000168280563324417!GO:0009060;aerobic respiration;0.000172630846548798!GO:0004674;protein serine/threonine kinase activity;0.000184709390246142!GO:0009607;response to biotic stimulus;0.000203074162136942!GO:0009966;regulation of signal transduction;0.000218317142307996!GO:0043492;ATPase activity, coupled to movement of substances;0.000221796623241031!GO:0009892;negative regulation of metabolic process;0.000226636147350411!GO:0046930;pore complex;0.000237619249303681!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.0002423155544805!GO:0031410;cytoplasmic vesicle;0.000246723719819398!GO:0006752;group transfer coenzyme metabolic process;0.000260305724429334!GO:0002520;immune system development;0.000265583128469466!GO:0045045;secretory pathway;0.000293869458066121!GO:0005789;endoplasmic reticulum membrane;0.000305918939909036!GO:0005761;mitochondrial ribosome;0.000305918939909036!GO:0000313;organellar ribosome;0.000305918939909036!GO:0051251;positive regulation of lymphocyte activation;0.000307226591219176!GO:0006612;protein targeting to membrane;0.000307226591219176!GO:0030099;myeloid cell differentiation;0.000311506330500804!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000321792076548146!GO:0005885;Arp2/3 protein complex;0.000341006118426595!GO:0000785;chromatin;0.000351378578308536!GO:0016481;negative regulation of transcription;0.000357627173288971!GO:0006402;mRNA catabolic process;0.00036214503773576!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000396914886237367!GO:0000139;Golgi membrane;0.000413879359400694!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000423722641871671!GO:0065002;intracellular protein transport across a membrane;0.000447229833173911!GO:0009108;coenzyme biosynthetic process;0.000453396519323138!GO:0005083;small GTPase regulator activity;0.000478869092891383!GO:0031988;membrane-bound vesicle;0.00049058397496642!GO:0050851;antigen receptor-mediated signaling pathway;0.000513417002412157!GO:0003714;transcription corepressor activity;0.000573222953657977!GO:0010468;regulation of gene expression;0.000704005561727837!GO:0006650;glycerophospholipid metabolic process;0.000776398820308837!GO:0005694;chromosome;0.000784391723092475!GO:0005057;receptor signaling protein activity;0.000868395033097326!GO:0022402;cell cycle process;0.000948269086064386!GO:0045333;cellular respiration;0.000948269086064386!GO:0051427;hormone receptor binding;0.000948269086064386!GO:0007034;vacuolar transport;0.000948758240236951!GO:0016072;rRNA metabolic process;0.000974858222950849!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000984551765423346!GO:0016779;nucleotidyltransferase activity;0.00103100401577422!GO:0005769;early endosome;0.00104947125911082!GO:0008654;phospholipid biosynthetic process;0.0010638847627285!GO:0042101;T cell receptor complex;0.0010737067542666!GO:0015992;proton transport;0.00113214513957832!GO:0006818;hydrogen transport;0.00113902257697239!GO:0018193;peptidyl-amino acid modification;0.00115206587781564!GO:0016023;cytoplasmic membrane-bound vesicle;0.00117464064461519!GO:0006364;rRNA processing;0.00126489032180918!GO:0048468;cell development;0.00126967042796847!GO:0008186;RNA-dependent ATPase activity;0.00137719253611649!GO:0009719;response to endogenous stimulus;0.00152702202680487!GO:0035257;nuclear hormone receptor binding;0.00159701259657457!GO:0044427;chromosomal part;0.0016500155778748!GO:0006099;tricarboxylic acid cycle;0.00174404342360754!GO:0046356;acetyl-CoA catabolic process;0.00174404342360754!GO:0030384;phosphoinositide metabolic process;0.00175491541450771!GO:0008234;cysteine-type peptidase activity;0.00176994964498891!GO:0001816;cytokine production;0.00183248341054262!GO:0001726;ruffle;0.00184891527663136!GO:0048534;hemopoietic or lymphoid organ development;0.00187215066440019!GO:0048471;perinuclear region of cytoplasm;0.00188446266181045!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00203051786862457!GO:0006399;tRNA metabolic process;0.00203673974621675!GO:0016301;kinase activity;0.00218400792205932!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00243179585591381!GO:0004812;aminoacyl-tRNA ligase activity;0.00243179585591381!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00243179585591381!GO:0043087;regulation of GTPase activity;0.00249937555257328!GO:0030118;clathrin coat;0.0026072192317493!GO:0042113;B cell activation;0.00264470776149622!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00265261060301548!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0027263536334286!GO:0003729;mRNA binding;0.00293702952663945!GO:0022890;inorganic cation transmembrane transporter activity;0.00295073903439255!GO:0043038;amino acid activation;0.00297354904418501!GO:0006418;tRNA aminoacylation for protein translation;0.00297354904418501!GO:0043039;tRNA aminoacylation;0.00297354904418501!GO:0007050;cell cycle arrest;0.00297618517702795!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00309915149808635!GO:0030041;actin filament polymerization;0.00310404094954323!GO:0006350;transcription;0.0031124897155795!GO:0005667;transcription factor complex;0.00311283530732066!GO:0008624;induction of apoptosis by extracellular signals;0.0034417005427763!GO:0046822;regulation of nucleocytoplasmic transport;0.00355578691328134!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0035602510456291!GO:0048250;mitochondrial iron ion transport;0.00356600199315922!GO:0006084;acetyl-CoA metabolic process;0.00358046701493519!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00358167719827208!GO:0016363;nuclear matrix;0.00358167719827208!GO:0006611;protein export from nucleus;0.00360828650091611!GO:0006643;membrane lipid metabolic process;0.00361423079248526!GO:0004004;ATP-dependent RNA helicase activity;0.00368673371124417!GO:0006897;endocytosis;0.003833521588448!GO:0010324;membrane invagination;0.003833521588448!GO:0030658;transport vesicle membrane;0.00422950943957204!GO:0008270;zinc ion binding;0.00424324825958175!GO:0006919;caspase activation;0.00429451581897026!GO:0005813;centrosome;0.00442387753802768!GO:0030036;actin cytoskeleton organization and biogenesis;0.00471838312923727!GO:0051090;regulation of transcription factor activity;0.0047305672738088!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00497827643165348!GO:0051187;cofactor catabolic process;0.00508198326442976!GO:0042802;identical protein binding;0.00513949594387745!GO:0006468;protein amino acid phosphorylation;0.00527361167037046!GO:0002252;immune effector process;0.00564084763141617!GO:0043281;regulation of caspase activity;0.00569886954179403!GO:0007005;mitochondrion organization and biogenesis;0.00575648072384801!GO:0030133;transport vesicle;0.00584581305324158!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00589806722467701!GO:0002443;leukocyte mediated immunity;0.00595884029179657!GO:0051252;regulation of RNA metabolic process;0.00601963952085929!GO:0030521;androgen receptor signaling pathway;0.00612882177148382!GO:0008154;actin polymerization and/or depolymerization;0.00622793956982413!GO:0030518;steroid hormone receptor signaling pathway;0.00627177774729953!GO:0006891;intra-Golgi vesicle-mediated transport;0.00627177774729953!GO:0051092;activation of NF-kappaB transcription factor;0.00639583005450804!GO:0031497;chromatin assembly;0.00642270007282054!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00645655824986802!GO:0050871;positive regulation of B cell activation;0.00647703301134619!GO:0003725;double-stranded RNA binding;0.00676223181192336!GO:0001819;positive regulation of cytokine production;0.00698318944647469!GO:0006334;nucleosome assembly;0.00717287533381809!GO:0005741;mitochondrial outer membrane;0.00729878205606458!GO:0009109;coenzyme catabolic process;0.00729878205606458!GO:0031901;early endosome membrane;0.00732797668889557!GO:0051707;response to other organism;0.0074725638228685!GO:0050870;positive regulation of T cell activation;0.00758057177958903!GO:0016791;phosphoric monoester hydrolase activity;0.00760604881268611!GO:0005637;nuclear inner membrane;0.00765884398862674!GO:0046914;transition metal ion binding;0.00776577930580811!GO:0006914;autophagy;0.00778941861952428!GO:0008637;apoptotic mitochondrial changes;0.00782142077335424!GO:0043623;cellular protein complex assembly;0.00802504172463072!GO:0051223;regulation of protein transport;0.0082102728512746!GO:0004722;protein serine/threonine phosphatase activity;0.00825963175340113!GO:0042168;heme metabolic process;0.00826633893714167!GO:0033116;ER-Golgi intermediate compartment membrane;0.0085295905419884!GO:0007041;lysosomal transport;0.00860315499646024!GO:0045576;mast cell activation;0.00886108288647004!GO:0043021;ribonucleoprotein binding;0.00889578286078828!GO:0050811;GABA receptor binding;0.00903051093747316!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00906916894240125!GO:0045892;negative regulation of transcription, DNA-dependent;0.00933103180739342!GO:0005099;Ras GTPase activator activity;0.0094383484663219!GO:0006783;heme biosynthetic process;0.00954234406214789!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00961701785774497!GO:0030119;AP-type membrane coat adaptor complex;0.0098510394753148!GO:0003690;double-stranded DNA binding;0.0103416167465755!GO:0030660;Golgi-associated vesicle membrane;0.0103905695639531!GO:0051249;regulation of lymphocyte activation;0.0104097312068757!GO:0031072;heat shock protein binding;0.0104328954526889!GO:0048500;signal recognition particle;0.0105377557404091!GO:0051920;peroxiredoxin activity;0.0106585033119965!GO:0043280;positive regulation of caspase activity;0.0106585033119965!GO:0006778;porphyrin metabolic process;0.0106585033119965!GO:0033013;tetrapyrrole metabolic process;0.0106585033119965!GO:0006644;phospholipid metabolic process;0.0106844005905916!GO:0001817;regulation of cytokine production;0.0111209827321786!GO:0042287;MHC protein binding;0.011144937834701!GO:0019867;outer membrane;0.0112634970290244!GO:0044262;cellular carbohydrate metabolic process;0.0113185651957925!GO:0050865;regulation of cell activation;0.0116010230992675!GO:0030131;clathrin adaptor complex;0.0117146523579875!GO:0002440;production of molecular mediator of immune response;0.0117783828883416!GO:0004185;serine carboxypeptidase activity;0.0124651124094094!GO:0043299;leukocyte degranulation;0.0127019287579338!GO:0043488;regulation of mRNA stability;0.0127284658640845!GO:0043487;regulation of RNA stability;0.0127284658640845!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0127400895619203!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0127400895619203!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0127400895619203!GO:0048487;beta-tubulin binding;0.0128998060079515!GO:0045454;cell redox homeostasis;0.0130356729388001!GO:0005521;lamin binding;0.0131100103973452!GO:0019221;cytokine and chemokine mediated signaling pathway;0.013135289958782!GO:0000287;magnesium ion binding;0.0134823234506019!GO:0006779;porphyrin biosynthetic process;0.0137682556154611!GO:0033014;tetrapyrrole biosynthetic process;0.0137682556154611!GO:0031968;organelle outer membrane;0.013921284138852!GO:0005815;microtubule organizing center;0.0139881116914832!GO:0022415;viral reproductive process;0.0146864261415617!GO:0006968;cellular defense response;0.0147365771603789!GO:0030867;rough endoplasmic reticulum membrane;0.0147542557614566!GO:0046467;membrane lipid biosynthetic process;0.0148183466489893!GO:0002274;myeloid leukocyte activation;0.0148183466489893!GO:0000118;histone deacetylase complex;0.0148678249168918!GO:0008287;protein serine/threonine phosphatase complex;0.0149302332364379!GO:0016505;apoptotic protease activator activity;0.0149489552667407!GO:0048002;antigen processing and presentation of peptide antigen;0.0149489552667407!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0149489552667407!GO:0045047;protein targeting to ER;0.0149489552667407!GO:0006007;glucose catabolic process;0.0150018640523537!GO:0046456;icosanoid biosynthetic process;0.0150122053907257!GO:0051338;regulation of transferase activity;0.0151975479565605!GO:0046474;glycerophospholipid biosynthetic process;0.0152431497039443!GO:0030258;lipid modification;0.0153141597941283!GO:0009165;nucleotide biosynthetic process;0.0160925382896988!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0166640896001599!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0166640896001599!GO:0019883;antigen processing and presentation of endogenous antigen;0.016748144032845!GO:0030522;intracellular receptor-mediated signaling pathway;0.0172696885452883!GO:0046489;phosphoinositide biosynthetic process;0.0179910355920242!GO:0006595;polyamine metabolic process;0.0181901505334748!GO:0031625;ubiquitin protein ligase binding;0.0182016128063707!GO:0043085;positive regulation of catalytic activity;0.0185557767664128!GO:0051789;response to protein stimulus;0.018858611795917!GO:0006986;response to unfolded protein;0.018858611795917!GO:0009893;positive regulation of metabolic process;0.0188673762593737!GO:0019904;protein domain specific binding;0.0188977014072963!GO:0043300;regulation of leukocyte degranulation;0.0190164704396476!GO:0006213;pyrimidine nucleoside metabolic process;0.0199206247711922!GO:0032318;regulation of Ras GTPase activity;0.0199412445789251!GO:0015631;tubulin binding;0.0199412445789251!GO:0048821;erythrocyte development;0.0202432520719808!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0204251049438735!GO:0043549;regulation of kinase activity;0.0205412577945093!GO:0000209;protein polyubiquitination;0.0220037780467689!GO:0008312;7S RNA binding;0.0222749258601866!GO:0019318;hexose metabolic process;0.0222749258601866!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0223378163334989!GO:0035258;steroid hormone receptor binding;0.0223429427275299!GO:0045653;negative regulation of megakaryocyte differentiation;0.0223429921019885!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0224119126955025!GO:0002682;regulation of immune system process;0.0226174172175969!GO:0004177;aminopeptidase activity;0.0227754377901579!GO:0030663;COPI coated vesicle membrane;0.0227754377901579!GO:0030126;COPI vesicle coat;0.0227754377901579!GO:0006740;NADPH regeneration;0.0231198813082244!GO:0006098;pentose-phosphate shunt;0.0231198813082244!GO:0022406;membrane docking;0.023268375601231!GO:0048278;vesicle docking;0.023268375601231!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.023416731744741!GO:0002819;regulation of adaptive immune response;0.023416731744741!GO:0008656;caspase activator activity;0.0234825577754701!GO:0043506;regulation of JNK activity;0.0235399060790977!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0236886379892061!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0236886379892061!GO:0019864;IgG binding;0.0242110124365493!GO:0030137;COPI-coated vesicle;0.0243506410437044!GO:0019955;cytokine binding;0.0246542649395319!GO:0016251;general RNA polymerase II transcription factor activity;0.0251184690127343!GO:0033157;regulation of intracellular protein transport;0.0252838175927277!GO:0042306;regulation of protein import into nucleus;0.0252838175927277!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0253212220753924!GO:0046979;TAP2 binding;0.0256003684332837!GO:0046977;TAP binding;0.0256003684332837!GO:0046978;TAP1 binding;0.0256003684332837!GO:0006383;transcription from RNA polymerase III promoter;0.0256003684332837!GO:0005996;monosaccharide metabolic process;0.0256615884253332!GO:0030125;clathrin vesicle coat;0.0257486471494408!GO:0030665;clathrin coated vesicle membrane;0.0257486471494408!GO:0051091;positive regulation of transcription factor activity;0.0259180577674316!GO:0002218;activation of innate immune response;0.0259180577674316!GO:0002758;innate immune response-activating signal transduction;0.0259180577674316!GO:0001836;release of cytochrome c from mitochondria;0.0259180577674316!GO:0047485;protein N-terminus binding;0.0259180577674316!GO:0030674;protein binding, bridging;0.0259180577674316!GO:0002448;mast cell mediated immunity;0.0259507289717182!GO:0043303;mast cell degranulation;0.0259507289717182!GO:0004197;cysteine-type endopeptidase activity;0.0260728179936389!GO:0006904;vesicle docking during exocytosis;0.0261554571406932!GO:0045058;T cell selection;0.026176865046861!GO:0031294;lymphocyte costimulation;0.0264901982050177!GO:0031295;T cell costimulation;0.0264901982050177!GO:0050681;androgen receptor binding;0.0265566796504733!GO:0051049;regulation of transport;0.0267541697237161!GO:0051098;regulation of binding;0.0267710358472599!GO:0006352;transcription initiation;0.0271580462823562!GO:0006672;ceramide metabolic process;0.0271580462823562!GO:0050853;B cell receptor signaling pathway;0.0279706719189837!GO:0051345;positive regulation of hydrolase activity;0.0286194514676728!GO:0002253;activation of immune response;0.0292304255971426!GO:0015923;mannosidase activity;0.0295008458342785!GO:0006607;NLS-bearing substrate import into nucleus;0.0295807501402559!GO:0016853;isomerase activity;0.029832602765052!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0301618787463385!GO:0045449;regulation of transcription;0.0302393646687354!GO:0006414;translational elongation;0.0306978107292438!GO:0006260;DNA replication;0.0309702559708398!GO:0009897;external side of plasma membrane;0.031199339760898!GO:0002449;lymphocyte mediated immunity;0.031199339760898!GO:0002444;myeloid leukocyte mediated immunity;0.0314405968605541!GO:0051881;regulation of mitochondrial membrane potential;0.0316399485498159!GO:0030503;regulation of cell redox homeostasis;0.0316485804471167!GO:0006376;mRNA splice site selection;0.0317216523407623!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0317216523407623!GO:0045859;regulation of protein kinase activity;0.031930416351384!GO:0007259;JAK-STAT cascade;0.0319313213481746!GO:0042613;MHC class II protein complex;0.0320867394860126!GO:0008017;microtubule binding;0.0321067183886563!GO:0019863;IgE binding;0.0321634340184662!GO:0045637;regulation of myeloid cell differentiation;0.0324251477494268!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0329062221220941!GO:0030029;actin filament-based process;0.0333409087909825!GO:0043235;receptor complex;0.0341280542014405!GO:0030100;regulation of endocytosis;0.0341338441110999!GO:0043028;caspase regulator activity;0.0344078847782611!GO:0030132;clathrin coat of coated pit;0.0344078847782611!GO:0016584;nucleosome positioning;0.0345713443684483!GO:0050727;regulation of inflammatory response;0.0348188158679099!GO:0031347;regulation of defense response;0.0348188158679099!GO:0001784;phosphotyrosine binding;0.034847921412919!GO:0015036;disulfide oxidoreductase activity;0.0350276862598521!GO:0002521;leukocyte differentiation;0.0350276862598521!GO:0005791;rough endoplasmic reticulum;0.0357226782092098!GO:0050863;regulation of T cell activation;0.035820816246039!GO:0007040;lysosome organization and biogenesis;0.0362360112481671!GO:0006405;RNA export from nucleus;0.036552205724504!GO:0001516;prostaglandin biosynthetic process;0.036552205724504!GO:0046457;prostanoid biosynthetic process;0.036552205724504!GO:0030176;integral to endoplasmic reticulum membrane;0.036552205724504!GO:0002467;germinal center formation;0.0365912689191033!GO:0000303;response to superoxide;0.0366598812851903!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0367955052861107!GO:0003899;DNA-directed RNA polymerase activity;0.0372883229869483!GO:0050776;regulation of immune response;0.0373016099304641!GO:0045309;protein phosphorylated amino acid binding;0.0376004812877262!GO:0030140;trans-Golgi network transport vesicle;0.0379203329032126!GO:0008629;induction of apoptosis by intracellular signals;0.0381383968515565!GO:0043304;regulation of mast cell degranulation;0.0384559230035843!GO:0051050;positive regulation of transport;0.0397271897724386!GO:0045121;lipid raft;0.0397271897724386!GO:0033367;protein localization in mast cell secretory granule;0.0397271897724386!GO:0033365;protein localization in organelle;0.0397271897724386!GO:0033371;T cell secretory granule organization and biogenesis;0.0397271897724386!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0397271897724386!GO:0033375;protease localization in T cell secretory granule;0.0397271897724386!GO:0042629;mast cell granule;0.0397271897724386!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0397271897724386!GO:0033364;mast cell secretory granule organization and biogenesis;0.0397271897724386!GO:0033380;granzyme B localization in T cell secretory granule;0.0397271897724386!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0397271897724386!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0397271897724386!GO:0033368;protease localization in mast cell secretory granule;0.0397271897724386!GO:0033366;protein localization in secretory granule;0.0397271897724386!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0397271897724386!GO:0033374;protein localization in T cell secretory granule;0.0397271897724386!GO:0005762;mitochondrial large ribosomal subunit;0.0398830435401438!GO:0000315;organellar large ribosomal subunit;0.0398830435401438!GO:0005684;U2-dependent spliceosome;0.0398830435401438!GO:0003746;translation elongation factor activity;0.0408432105385221!GO:0046519;sphingoid metabolic process;0.0409419847555406!GO:0051219;phosphoprotein binding;0.0414656707050565!GO:0032763;regulation of mast cell cytokine production;0.0414656707050565!GO:0032762;mast cell cytokine production;0.0414656707050565!GO:0000305;response to oxygen radical;0.0419188484302431!GO:0006516;glycoprotein catabolic process;0.0420602719419241!GO:0016859;cis-trans isomerase activity;0.0424404419318105!GO:0005048;signal sequence binding;0.0425724600188901!GO:0032760;positive regulation of tumor necrosis factor production;0.0429388372914788!GO:0042602;flavin reductase activity;0.0433363552892789!GO:0006509;membrane protein ectodomain proteolysis;0.0433363552892789!GO:0033619;membrane protein proteolysis;0.0433363552892789!GO:0032774;RNA biosynthetic process;0.0440870997665505!GO:0019865;immunoglobulin binding;0.0444363202507577!GO:0048872;homeostasis of number of cells;0.0451164862819378!GO:0006351;transcription, DNA-dependent;0.045481260902862!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0463796519567787!GO:0045646;regulation of erythrocyte differentiation;0.0468647315054792!GO:0002250;adaptive immune response;0.0469513060023948!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0469513060023948!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0472165617985254!GO:0005669;transcription factor TFIID complex;0.0482416568186227!GO:0017166;vinculin binding;0.0484367134465323!GO:0045893;positive regulation of transcription, DNA-dependent;0.0487466416725248!GO:0005869;dynactin complex;0.0488706453837258!GO:0006338;chromatin remodeling;0.0492382295442152!GO:0045730;respiratory burst;0.0493755943108936!GO:0002684;positive regulation of immune system process;0.0494731434258996!GO:0046983;protein dimerization activity;0.0494731434258996 | |||
|sample_id=12180 | |sample_id=12180 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=GATA6:4.17062460993;T:2.47333487981;SPI1:2.32301165007;ETS1,2:2.25926557459;SPIB:2.1955147047;STAT5{A,B}:2.12222505491;FOXO1,3,4:2.11527720506;FOX{F1,F2,J1}:1.95699512733;ELF1,2,4:1.95157116663;FOX{D1,D2}:1.83567977691;RUNX1..3:1.74177970934;DMAP1_NCOR{1,2}_SMARC:1.6814377776;SPZ1:1.58895342732;FOXD3:1.57554823736;TLX2:1.50335970704;TFAP4:1.49128089017;IRF7:1.4212968168;FOXP3:1.32192725258;NANOG{mouse}:1.29747058104;TGIF1:1.16808910995;CEBPA,B_DDIT3:1.16024016968;EP300:1.15982260035;HBP1_HMGB_SSRP1_UBTF:1.09542587923;HMX1:1.0711927277;PDX1:1.07109480829;IRF1,2:1.06068163818;FOX{I1,J2}:1.03599109065;ALX1:1.03064237242;STAT1,3:1.01017016814;NKX3-2:0.978787199247;PAX3,7:0.977532315916;CDX1,2,4:0.969058856389;ZNF148:0.929075494393;NFIL3:0.893167120916;SREBF1,2:0.825489370251;MYOD1:0.816904914443;FOXN1:0.78323022736;NFATC1..3:0.767575831927;POU5F1:0.736467121477;TOPORS:0.72820695226;SMAD1..7,9:0.700540284029;STAT2,4,6:0.660660929004;CRX:0.650740616567;PAX2:0.644778224934;RBPJ:0.634326808087;NFE2L2:0.608728908416;NFIX:0.588784560151;MYFfamily:0.554071121954;POU2F1..3:0.551044566191;ZNF423:0.528562224561;TFCP2:0.528350789487;RFX2..5_RFXANK_RFXAP:0.49622080044;AIRE:0.49197297685;ZEB1:0.467560343427;NKX2-2,8:0.430524845994;IKZF2:0.397831496426;NR6A1:0.39404130428;RREB1:0.372946230211;MZF1:0.372124578643;BPTF:0.368707969293;PPARG:0.359599160236;NR1H4:0.340845613492;OCT4_SOX2{dimer}:0.326757189576;RXRA_VDR{dimer}:0.305262440975;FOXA2:0.298707390689;EVI1:0.284423382135;DBP:0.230925112826;SNAI1..3:0.218217595182;BREu{core}:0.180808456719;HLF:0.139353305398;CUX2:0.10277036925;NFE2L1:0.0967143101735;FOXP1:0.095089389198;ZNF238:0.0913201855656;NR3C1:0.0826401145823;MYB:0.0772543854661;GATA4:0.0522155712247;NFKB1_REL_RELA:0.0255889071885;NFE2:-0.0124762213137;ATF5_CREB3:-0.0273836872534;MAZ:-0.0298854850979;NKX3-1:-0.0406364386115;PITX1..3:-0.050162086436;LMO2:-0.0694318707765;LEF1_TCF7_TCF7L1,2:-0.119189876576;SRF:-0.132923325504;XCPE1{core}:-0.175652843449;NHLH1,2:-0.210785538616;POU1F1:-0.214425096263;HOXA9_MEIS1:-0.217711903208;GLI1..3:-0.232786539349;ADNP_IRX_SIX_ZHX:-0.24720614545;PAX4:-0.262139602869;SP1:-0.271629147599;ELK1,4_GABP{A,B1}:-0.297644394564;TAL1_TCF{3,4,12}:-0.348598554353;REST:-0.355233428155;CREB1:-0.392344068139;ATF2:-0.399000820143;BACH2:-0.424205909552;VSX1,2:-0.444130755058;HMGA1,2:-0.450401173984;POU6F1:-0.45381271181;ZBTB16:-0.4952785766;FOSL2:-0.509731069165;PRDM1:-0.523696439064;RFX1:-0.53107670724;NKX2-1,4:-0.545455354279;MTE{core}:-0.563767138191;RORA:-0.575962533232;ALX4:-0.585964167506;FOS_FOS{B,L1}_JUN{B,D}:-0.594833295036;FOXQ1:-0.608963324947;PRRX1,2:-0.624276008194;ZFP161:-0.644686052027;KLF4:-0.650385120095;TLX1..3_NFIC{dimer}:-0.671948083716;HNF4A_NR2F1,2:-0.67373047843;NRF1:-0.685380663926;MAFB:-0.703522546833;HNF1A:-0.707275171663;MEF2{A,B,C,D}:-0.708540276412;ESR1:-0.73171181951;TFAP2{A,C}:-0.748713830942;LHX3,4:-0.754124979127;XBP1:-0.769229340375;NKX6-1,2:-0.775627509421;NR5A1,2:-0.791883793505;GTF2I:-0.792944402902;ZNF143:-0.808407805789;ATF4:-0.829959232233;TBX4,5:-0.864305437656;NFY{A,B,C}:-0.868028633164;PATZ1:-0.872631337629;AR:-0.902062107348;YY1:-1.03203370331;MTF1:-1.0592683068;PAX6:-1.0593728067;PBX1:-1.06642804227;SOX2:-1.06670949508;TBP:-1.06721387797;EN1,2:-1.07187324655;TFAP2B:-1.07466330723;JUN:-1.07795375375;EGR1..3:-1.08236115127;SOX{8,9,10}:-1.109718423;PAX5:-1.11357588665;HIC1:-1.1414387902;MED-1{core}:-1.2194279352;E2F1..5:-1.22239733441;NKX2-3_NKX2-5:-1.22584981848;SOX5:-1.23364672419;EBF1:-1.2398468829;NANOG:-1.25570335609;FOXL1:-1.27747528481;GZF1:-1.2859859839;ZNF384:-1.3447305367;RXR{A,B,G}:-1.36284915239;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.36893771319;TP53:-1.37419315751;GFI1:-1.38924918005;HES1:-1.39012907129;UFEwm:-1.40866089988;GCM1,2:-1.45076525301;HIF1A:-1.46037423002;HSF1,2:-1.47257507019;ZBTB6:-1.47478402392;POU3F1..4:-1.47524232272;HOX{A6,A7,B6,B7}:-1.49724611282;MYBL2:-1.50923070691;ESRRA:-1.51134929847;GFI1B:-1.51502849333;PAX8:-1.58003836166;TEAD1:-1.58528205481;ZIC1..3:-1.59205162142;AHR_ARNT_ARNT2:-1.64898674616;bHLH_family:-1.69309512164;FOXM1:-1.69525685165;HAND1,2:-1.72753645065;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.78477281686;TEF:-1.79239421756;ATF6:-1.91460878737;HOX{A4,D4}:-1.93695234976;CDC5L:-1.93960025525;GTF2A1,2:-1.9562705436;HOX{A5,B5}:-2.11475923707;ARID5B:-2.12677836759;TFDP1:-2.35572218491;SOX17:-2.37686532277;ONECUT1,2:-2.39697259705;PAX1,9:-2.5025167081;IKZF1:-3.07067697355 | |top_motifs=GATA6:4.17062460993;T:2.47333487981;SPI1:2.32301165007;ETS1,2:2.25926557459;SPIB:2.1955147047;STAT5{A,B}:2.12222505491;FOXO1,3,4:2.11527720506;FOX{F1,F2,J1}:1.95699512733;ELF1,2,4:1.95157116663;FOX{D1,D2}:1.83567977691;RUNX1..3:1.74177970934;DMAP1_NCOR{1,2}_SMARC:1.6814377776;SPZ1:1.58895342732;FOXD3:1.57554823736;TLX2:1.50335970704;TFAP4:1.49128089017;IRF7:1.4212968168;FOXP3:1.32192725258;NANOG{mouse}:1.29747058104;TGIF1:1.16808910995;CEBPA,B_DDIT3:1.16024016968;EP300:1.15982260035;HBP1_HMGB_SSRP1_UBTF:1.09542587923;HMX1:1.0711927277;PDX1:1.07109480829;IRF1,2:1.06068163818;FOX{I1,J2}:1.03599109065;ALX1:1.03064237242;STAT1,3:1.01017016814;NKX3-2:0.978787199247;PAX3,7:0.977532315916;CDX1,2,4:0.969058856389;ZNF148:0.929075494393;NFIL3:0.893167120916;SREBF1,2:0.825489370251;MYOD1:0.816904914443;FOXN1:0.78323022736;NFATC1..3:0.767575831927;POU5F1:0.736467121477;TOPORS:0.72820695226;SMAD1..7,9:0.700540284029;STAT2,4,6:0.660660929004;CRX:0.650740616567;PAX2:0.644778224934;RBPJ:0.634326808087;NFE2L2:0.608728908416;NFIX:0.588784560151;MYFfamily:0.554071121954;POU2F1..3:0.551044566191;ZNF423:0.528562224561;TFCP2:0.528350789487;RFX2..5_RFXANK_RFXAP:0.49622080044;AIRE:0.49197297685;ZEB1:0.467560343427;NKX2-2,8:0.430524845994;IKZF2:0.397831496426;NR6A1:0.39404130428;RREB1:0.372946230211;MZF1:0.372124578643;BPTF:0.368707969293;PPARG:0.359599160236;NR1H4:0.340845613492;OCT4_SOX2{dimer}:0.326757189576;RXRA_VDR{dimer}:0.305262440975;FOXA2:0.298707390689;EVI1:0.284423382135;DBP:0.230925112826;SNAI1..3:0.218217595182;BREu{core}:0.180808456719;HLF:0.139353305398;CUX2:0.10277036925;NFE2L1:0.0967143101735;FOXP1:0.095089389198;ZNF238:0.0913201855656;NR3C1:0.0826401145823;MYB:0.0772543854661;GATA4:0.0522155712247;NFKB1_REL_RELA:0.0255889071885;NFE2:-0.0124762213137;ATF5_CREB3:-0.0273836872534;MAZ:-0.0298854850979;NKX3-1:-0.0406364386115;PITX1..3:-0.050162086436;LMO2:-0.0694318707765;LEF1_TCF7_TCF7L1,2:-0.119189876576;SRF:-0.132923325504;XCPE1{core}:-0.175652843449;NHLH1,2:-0.210785538616;POU1F1:-0.214425096263;HOXA9_MEIS1:-0.217711903208;GLI1..3:-0.232786539349;ADNP_IRX_SIX_ZHX:-0.24720614545;PAX4:-0.262139602869;SP1:-0.271629147599;ELK1,4_GABP{A,B1}:-0.297644394564;TAL1_TCF{3,4,12}:-0.348598554353;REST:-0.355233428155;CREB1:-0.392344068139;ATF2:-0.399000820143;BACH2:-0.424205909552;VSX1,2:-0.444130755058;HMGA1,2:-0.450401173984;POU6F1:-0.45381271181;ZBTB16:-0.4952785766;FOSL2:-0.509731069165;PRDM1:-0.523696439064;RFX1:-0.53107670724;NKX2-1,4:-0.545455354279;MTE{core}:-0.563767138191;RORA:-0.575962533232;ALX4:-0.585964167506;FOS_FOS{B,L1}_JUN{B,D}:-0.594833295036;FOXQ1:-0.608963324947;PRRX1,2:-0.624276008194;ZFP161:-0.644686052027;KLF4:-0.650385120095;TLX1..3_NFIC{dimer}:-0.671948083716;HNF4A_NR2F1,2:-0.67373047843;NRF1:-0.685380663926;MAFB:-0.703522546833;HNF1A:-0.707275171663;MEF2{A,B,C,D}:-0.708540276412;ESR1:-0.73171181951;TFAP2{A,C}:-0.748713830942;LHX3,4:-0.754124979127;XBP1:-0.769229340375;NKX6-1,2:-0.775627509421;NR5A1,2:-0.791883793505;GTF2I:-0.792944402902;ZNF143:-0.808407805789;ATF4:-0.829959232233;TBX4,5:-0.864305437656;NFY{A,B,C}:-0.868028633164;PATZ1:-0.872631337629;AR:-0.902062107348;YY1:-1.03203370331;MTF1:-1.0592683068;PAX6:-1.0593728067;PBX1:-1.06642804227;SOX2:-1.06670949508;TBP:-1.06721387797;EN1,2:-1.07187324655;TFAP2B:-1.07466330723;JUN:-1.07795375375;EGR1..3:-1.08236115127;SOX{8,9,10}:-1.109718423;PAX5:-1.11357588665;HIC1:-1.1414387902;MED-1{core}:-1.2194279352;E2F1..5:-1.22239733441;NKX2-3_NKX2-5:-1.22584981848;SOX5:-1.23364672419;EBF1:-1.2398468829;NANOG:-1.25570335609;FOXL1:-1.27747528481;GZF1:-1.2859859839;ZNF384:-1.3447305367;RXR{A,B,G}:-1.36284915239;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.36893771319;TP53:-1.37419315751;GFI1:-1.38924918005;HES1:-1.39012907129;UFEwm:-1.40866089988;GCM1,2:-1.45076525301;HIF1A:-1.46037423002;HSF1,2:-1.47257507019;ZBTB6:-1.47478402392;POU3F1..4:-1.47524232272;HOX{A6,A7,B6,B7}:-1.49724611282;MYBL2:-1.50923070691;ESRRA:-1.51134929847;GFI1B:-1.51502849333;PAX8:-1.58003836166;TEAD1:-1.58528205481;ZIC1..3:-1.59205162142;AHR_ARNT_ARNT2:-1.64898674616;bHLH_family:-1.69309512164;FOXM1:-1.69525685165;HAND1,2:-1.72753645065;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.78477281686;TEF:-1.79239421756;ATF6:-1.91460878737;HOX{A4,D4}:-1.93695234976;CDC5L:-1.93960025525;GTF2A1,2:-1.9562705436;HOX{A5,B5}:-2.11475923707;ARID5B:-2.12677836759;TFDP1:-2.35572218491;SOX17:-2.37686532277;ONECUT1,2:-2.39697259705;PAX1,9:-2.5025167081;IKZF1:-3.07067697355 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12180-129A2;search_select_hide=table117:FF:12180-129A2 | |||
}} | }} | ||
Latest revision as of 18:33, 4 June 2020
| Name: | Whole blood (ribopure), donor090309, donation2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11671,RDhi10001 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11671
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11671
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.149 |
| 10 | 10 | 0.0942 |
| 100 | 100 | 0.496 |
| 101 | 101 | 0.211 |
| 102 | 102 | 0.579 |
| 103 | 103 | 0.101 |
| 104 | 104 | 0.885 |
| 105 | 105 | 0.0661 |
| 106 | 106 | 0.0554 |
| 107 | 107 | 0.657 |
| 108 | 108 | 0.881 |
| 109 | 109 | 0.112 |
| 11 | 11 | 0.108 |
| 110 | 110 | 0.359 |
| 111 | 111 | 0.28 |
| 112 | 112 | 0.123 |
| 113 | 113 | 0.178 |
| 114 | 114 | 0.0551 |
| 115 | 115 | 0.181 |
| 116 | 116 | 0.893 |
| 117 | 117 | 0.0417 |
| 118 | 118 | 0.464 |
| 119 | 119 | 0.333 |
| 12 | 12 | 0.441 |
| 120 | 120 | 0.698 |
| 121 | 121 | 0.657 |
| 122 | 122 | 0.257 |
| 123 | 123 | 0.105 |
| 124 | 124 | 0.0309 |
| 125 | 125 | 0.209 |
| 126 | 126 | 0.278 |
| 127 | 127 | 0.22 |
| 128 | 128 | 0.0459 |
| 129 | 129 | 0.376 |
| 13 | 13 | 0.862 |
| 130 | 130 | 0.539 |
| 131 | 131 | 0.369 |
| 132 | 132 | 0.602 |
| 133 | 133 | 0.372 |
| 134 | 134 | 0.75 |
| 135 | 135 | 0.177 |
| 136 | 136 | 1 |
| 137 | 137 | 0.0127 |
| 138 | 138 | 0.0784 |
| 139 | 139 | 0.0342 |
| 14 | 14 | 0.188 |
| 140 | 140 | 0.443 |
| 141 | 141 | 0.486 |
| 142 | 142 | 0.74 |
| 143 | 143 | 0.0035 |
| 144 | 144 | 0.802 |
| 145 | 145 | 0.328 |
| 146 | 146 | 0.617 |
| 147 | 147 | 0.223 |
| 148 | 148 | 0.191 |
| 149 | 149 | 0.479 |
| 15 | 15 | 0.0525 |
| 150 | 150 | 0.93 |
| 151 | 151 | 0.27 |
| 152 | 152 | 0.404 |
| 153 | 153 | 0.438 |
| 154 | 154 | 0.865 |
| 155 | 155 | 0.196 |
| 156 | 156 | 0.765 |
| 157 | 157 | 0.233 |
| 158 | 158 | 0.218 |
| 159 | 159 | 0.265 |
| 16 | 16 | 0.451 |
| 160 | 160 | 0.718 |
| 161 | 161 | 0.404 |
| 162 | 162 | 0.679 |
| 163 | 163 | 0.379 |
| 164 | 164 | 0.436 |
| 165 | 165 | 0.0787 |
| 166 | 166 | 0.952 |
| 167 | 167 | 0.85 |
| 168 | 168 | 0.0441 |
| 169 | 169 | 0.012 |
| 17 | 17 | 0.312 |
| 18 | 18 | 0.509 |
| 19 | 19 | 0.284 |
| 2 | 2 | 0.207 |
| 20 | 20 | 0.498 |
| 21 | 21 | 0.346 |
| 22 | 22 | 0.211 |
| 23 | 23 | 0.0707 |
| 24 | 24 | 0.0321 |
| 25 | 25 | 0.254 |
| 26 | 26 | 0.296 |
| 27 | 27 | 0.0868 |
| 28 | 28 | 0.459 |
| 29 | 29 | 0.585 |
| 3 | 3 | 0.0772 |
| 30 | 30 | 0.947 |
| 31 | 31 | 0.481 |
| 32 | 32 | 0.721 |
| 33 | 33 | 0.586 |
| 34 | 34 | 0.265 |
| 35 | 35 | 0.223 |
| 36 | 36 | 0.47 |
| 37 | 37 | 0.175 |
| 38 | 38 | 0.305 |
| 39 | 39 | 0.994 |
| 4 | 4 | 0.936 |
| 40 | 40 | 0.439 |
| 41 | 41 | 0.0979 |
| 42 | 42 | 0.246 |
| 43 | 43 | 0.16 |
| 44 | 44 | 0.415 |
| 45 | 45 | 0.361 |
| 46 | 46 | 0.132 |
| 47 | 47 | 0.181 |
| 48 | 48 | 0.258 |
| 49 | 49 | 0.124 |
| 5 | 5 | 0.153 |
| 50 | 50 | 0.91 |
| 51 | 51 | 0.435 |
| 52 | 52 | 0.52 |
| 53 | 53 | 0.129 |
| 54 | 54 | 0.257 |
| 55 | 55 | 0.12 |
| 56 | 56 | 0.233 |
| 57 | 57 | 0.755 |
| 58 | 58 | 0.0628 |
| 59 | 59 | 0.0372 |
| 6 | 6 | 0.652 |
| 60 | 60 | 0.0701 |
| 61 | 61 | 0.226 |
| 62 | 62 | 0.0192 |
| 63 | 63 | 0.503 |
| 64 | 64 | 0.375 |
| 65 | 65 | 0.154 |
| 66 | 66 | 0.678 |
| 67 | 67 | 0.287 |
| 68 | 68 | 0.243 |
| 69 | 69 | 0.323 |
| 7 | 7 | 0.204 |
| 70 | 70 | 0.0792 |
| 71 | 71 | 0.102 |
| 72 | 72 | 0.25 |
| 73 | 73 | 0.369 |
| 74 | 74 | 0.736 |
| 75 | 75 | 0.092 |
| 76 | 76 | 0.563 |
| 77 | 77 | 0.53 |
| 78 | 78 | 0.251 |
| 79 | 79 | 0.939 |
| 8 | 8 | 0.356 |
| 80 | 80 | 0.0112 |
| 81 | 81 | 0.259 |
| 82 | 82 | 0.0435 |
| 83 | 83 | 0.999 |
| 84 | 84 | 0.48 |
| 85 | 85 | 0.162 |
| 86 | 86 | 0.138 |
| 87 | 87 | 0.62 |
| 88 | 88 | 0.538 |
| 89 | 89 | 0.255 |
| 9 | 9 | 0.208 |
| 90 | 90 | 0.03 |
| 91 | 91 | 0.357 |
| 92 | 92 | 0.0769 |
| 93 | 93 | 0.309 |
| 94 | 94 | 0.127 |
| 95 | 95 | 0.556 |
| 96 | 96 | 0.0628 |
| 97 | 97 | 0.806 |
| 98 | 98 | 0.0178 |
| 99 | 99 | 0.41 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11671
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000281 human whole blood sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000178 (blood)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0010053 (human blood - adult sample)
0000004 (tissue sample)
0000281 (human whole blood sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
