FF:12189-129B2: Difference between revisions

Latest revision as of 18:33, 4 June 2020

Name:	CD19+ B Cells (pluriselect), donor090309, donation1
Species:	Human (Homo sapiens)
Library ID:	CNhs12177,RDhi10007
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	b cell
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00013679

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12177		CAGE		DRX008050		DRR008922
RDhi10007		RNA-Seq		DRX012341		DRR013789

Accession ID Hg19

Library id		BAM		CTSS
CNhs12177		DRZ000347		DRZ001732
RDhi10007		DRZ002990

Accession ID Hg38

Library id		BAM		CTSS
CNhs12177		DRZ011697		DRZ013082
RDhi10007

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.126
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.245
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.345
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.293
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.441
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.532
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.655
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.298
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	1.451
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.432
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.343
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.655
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.442
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	1.063
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.457
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.235
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	1.063
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.788
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12177

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	4.30773e-7
MA0003.1	MA0003.1	0.431
MA0004.1	MA0004.1	0.403
MA0006.1	MA0006.1	0.626
MA0007.1	MA0007.1	0.801
MA0009.1	MA0009.1	0.945
MA0014.1	MA0014.1	0.828
MA0017.1	MA0017.1	0.0194
MA0018.2	MA0018.2	0.937
MA0019.1	MA0019.1	0.822
MA0024.1	MA0024.1	0.479
MA0025.1	MA0025.1	0.343
MA0027.1	MA0027.1	0.578
MA0028.1	MA0028.1	0.0091
MA0029.1	MA0029.1	0.854
MA0030.1	MA0030.1	0.0625
MA0031.1	MA0031.1	0.233
MA0035.2	MA0035.2	0.148
MA0038.1	MA0038.1	0.348
MA0039.2	MA0039.2	0.864
MA0040.1	MA0040.1	0.708
MA0041.1	MA0041.1	0.134
MA0042.1	MA0042.1	0.769
MA0043.1	MA0043.1	0.856
MA0046.1	MA0046.1	0.767
MA0047.2	MA0047.2	0.145
MA0048.1	MA0048.1	0.297
MA0050.1	MA0050.1	5.0443e-9
MA0051.1	MA0051.1	2.00821e-4
MA0052.1	MA0052.1	0.335
MA0055.1	MA0055.1	0.815
MA0057.1	MA0057.1	0.922
MA0058.1	MA0058.1	0.35
MA0059.1	MA0059.1	0.195
MA0060.1	MA0060.1	0.255
MA0061.1	MA0061.1	4.29804e-4
MA0062.2	MA0062.2	3.7232e-8
MA0065.2	MA0065.2	0.0131
MA0066.1	MA0066.1	0.118
MA0067.1	MA0067.1	0.708
MA0068.1	MA0068.1	0.367
MA0069.1	MA0069.1	0.344
MA0070.1	MA0070.1	0.512
MA0071.1	MA0071.1	0.528
MA0072.1	MA0072.1	0.418
MA0073.1	MA0073.1	0.744
MA0074.1	MA0074.1	0.653
MA0076.1	MA0076.1	0.00119
MA0077.1	MA0077.1	0.564
MA0078.1	MA0078.1	0.774
MA0079.2	MA0079.2	0.356
MA0080.2	MA0080.2	2.70075e-11
MA0081.1	MA0081.1	0.00161
MA0083.1	MA0083.1	0.139
MA0084.1	MA0084.1	0.294
MA0087.1	MA0087.1	0.359
MA0088.1	MA0088.1	0.135
MA0090.1	MA0090.1	7.88899e-4
MA0091.1	MA0091.1	0.216
MA0092.1	MA0092.1	0.768
MA0093.1	MA0093.1	0.513
MA0099.2	MA0099.2	0.0857
MA0100.1	MA0100.1	0.442
MA0101.1	MA0101.1	0.0564
MA0102.2	MA0102.2	0.923
MA0103.1	MA0103.1	0.0143
MA0104.2	MA0104.2	0.127
MA0105.1	MA0105.1	1.61476e-7
MA0106.1	MA0106.1	0.995
MA0107.1	MA0107.1	0.0243
MA0108.2	MA0108.2	1.06069e-6
MA0111.1	MA0111.1	0.452
MA0112.2	MA0112.2	0.00105
MA0113.1	MA0113.1	0.288
MA0114.1	MA0114.1	0.0535
MA0115.1	MA0115.1	0.217
MA0116.1	MA0116.1	8.5076e-6
MA0117.1	MA0117.1	0.845
MA0119.1	MA0119.1	0.957
MA0122.1	MA0122.1	0.432
MA0124.1	MA0124.1	0.884
MA0125.1	MA0125.1	0.669
MA0131.1	MA0131.1	0.355
MA0135.1	MA0135.1	0.0158
MA0136.1	MA0136.1	1.07114e-14
MA0137.2	MA0137.2	0.742
MA0138.2	MA0138.2	0.267
MA0139.1	MA0139.1	0.209
MA0140.1	MA0140.1	0.0156
MA0141.1	MA0141.1	0.501
MA0142.1	MA0142.1	0.0358
MA0143.1	MA0143.1	0.5
MA0144.1	MA0144.1	0.952
MA0145.1	MA0145.1	0.784
MA0146.1	MA0146.1	0.37
MA0147.1	MA0147.1	0.123
MA0148.1	MA0148.1	0.281
MA0149.1	MA0149.1	0.0591
MA0150.1	MA0150.1	0.962
MA0152.1	MA0152.1	0.331
MA0153.1	MA0153.1	0.0393
MA0154.1	MA0154.1	2.39889e-4
MA0155.1	MA0155.1	0.886
MA0156.1	MA0156.1	7.79553e-10
MA0157.1	MA0157.1	0.121
MA0159.1	MA0159.1	0.0356
MA0160.1	MA0160.1	0.3
MA0162.1	MA0162.1	0.568
MA0163.1	MA0163.1	7.6575e-11
MA0164.1	MA0164.1	0.979
MA0258.1	MA0258.1	0.0108
MA0259.1	MA0259.1	0.542

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12177

Novel motif	Logo	P-value
1	1	0.106
10	10	0.054
100	100	0.602
101	101	0.311
102	102	0.99
103	103	0.0546
104	104	0.215
105	105	0.213
106	106	0.194
107	107	0.947
108	108	0.362
109	109	0.058
11	11	0.0492
110	110	0.14
111	111	0.113
112	112	0.221
113	113	0.0471
114	114	0.155
115	115	0.702
116	116	0.958
117	117	0.0083
118	118	0.26
119	119	0.469
12	12	0.792
120	120	0.388
121	121	0.962
122	122	0.616
123	123	0.148
124	124	0.03
125	125	0.127
126	126	0.124
127	127	0.479
128	128	0.703
129	129	0.643
13	13	0.528
130	130	0.459
131	131	0.511
132	132	0.579
133	133	0.0108
134	134	0.731
135	135	0.796
136	136	0.897
137	137	0.182
138	138	0.475
139	139	0.045
14	14	0.434
140	140	0.177
141	141	0.0454
142	142	0.485
143	143	0.00538
144	144	0.849
145	145	0.269
146	146	0.107
147	147	0.203
148	148	0.226
149	149	0.172
15	15	0.0737
150	150	0.51
151	151	0.622
152	152	0.983
153	153	0.722
154	154	0.987
155	155	0.0273
156	156	0.573
157	157	0.266
158	158	0.168
159	159	0.102
16	16	0.619
160	160	0.296
161	161	0.0999
162	162	0.964
163	163	0.528
164	164	0.646
165	165	0.482
166	166	0.703
167	167	0.0573
168	168	0.0533
169	169	0.23
17	17	0.507
18	18	0.291
19	19	0.993
2	2	0.806
20	20	0.87
21	21	0.742
22	22	0.583
23	23	0.808
24	24	0.297
25	25	0.0491
26	26	0.132
27	27	0.145
28	28	0.53
29	29	0.141
3	3	0.0526
30	30	0.624
31	31	0.515
32	32	0.973
33	33	0.472
34	34	0.746
35	35	0.135
36	36	0.00986
37	37	0.11
38	38	0.359
39	39	0.756
4	4	0.469
40	40	0.115
41	41	0.121
42	42	0.175
43	43	0.0993
44	44	0.334
45	45	0.742
46	46	0.128
47	47	0.0695
48	48	0.123
49	49	0.0776
5	5	0.272
50	50	0.911
51	51	0.349
52	52	0.863
53	53	0.459
54	54	0.572
55	55	0.055
56	56	0.578
57	57	0.217
58	58	0.0207
59	59	0.208
6	6	0.943
60	60	0.266
61	61	0.0577
62	62	0.012
63	63	0.497
64	64	0.175
65	65	0.463
66	66	0.548
67	67	0.431
68	68	0.217
69	69	0.843
7	7	0.166
70	70	0.0315
71	71	0.0403
72	72	0.0966
73	73	0.532
74	74	0.126
75	75	0.0226
76	76	0.26
77	77	0.788
78	78	0.168
79	79	0.296
8	8	0.326
80	80	0.00748
81	81	0.186
82	82	0.0823
83	83	0.564
84	84	0.512
85	85	0.402
86	86	0.117
87	87	0.322
88	88	0.954
89	89	0.409
9	9	0.399
90	90	0.0128
91	91	0.463
92	92	0.509
93	93	0.781
94	94	0.0409
95	95	0.016
96	96	0.33
97	97	0.505
98	98	0.183
99	99	0.27

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12177

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000025 CD19-positive B cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
+|DRA_sample_Accession=RNA-Seq@SAMD00013679
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000236,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000826,CL:0000837,CL:0000838,CL:0000945,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371
+|accession_numbers=CAGE;DRX008050;DRR008922;DRZ000347;DRZ001732;DRZ011697;DRZ013082!RNA-Seq;DRX012341;DRR013789;DRZ002990;
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.52!330.87!IRF8;;chr19:50922187..50922204,+!p1@SPIB!2.43!271.03!SPIB;;chr2:100759010..100759035,-!p1@AFF3!2.40!251.67!AFF3;;chr11:111249993..111250006,-!p1@POU2AF1!2.20!158.40!POU2AF1;;chr11:47400078..47400106,-!p1@SPI1!2.10!124.96!SPI1;;chr6:391743..391759,+!p1@IRF4!2.10!124.96!IRF4;;chr2:100759037..100759058,-!p2@AFF3!2.07!116.16!AFF3;;chr2:231090471..231090504,+!p2@SP140!1.98!95.04!SP140;;chr6:91006518..91006570,-!p1@BACH2!1.97!205.92!BACH2;;chr17:38020392..38020477,-!p1@IKZF3!1.92!82.72!IKZF3;;chr2:231090433..231090469,+!p1@SP140!1.90!79.20!SP140;;chr2:100758991..100759009,-!p3@AFF3!1.86!72.16!AFF3;;chr2:68592406..68592424,+!p1@PLEK!1.80!61.60!PLEK;;chr3:32023232..32023273,+!p1@ZNF860!1.76!79.20!ZNF860;;chr5:88178983..88179012,-!p1@MEF2C!1.73!388.95!MEF2C;;chr8:86099884..86099918,+!p4@E2F5!1.73!52.80!E2F5;;chr3:71355163..71355209,-!p5@FOXP1!1.72!70.40!FOXP1;;chr7:50343634..50343717,+!p2@IKZF1!1.70!49.28!IKZF1;;chr19:13213662..13213686,-!p1@LYL1!1.65!63.36!LYL1;;chr7:50344251..50344288,+!p3@IKZF1!1.58!36.96!IKZF1;;chr17:38020557..38020572,-!p4@IKZF3!1.56!35.20!IKZF3;;chr20:56195474..56195506,-!p1@ZBP1!1.56!35.20!ZBP1;;chr19:16435625..16435682,+!p1@KLF2!1.54!1026.06!KLF2;;chr2:60780607..60780624,-!p2@BCL11A!1.53!98.56!BCL11A;;chr8:86089627..86089653,+!p3@E2F5!1.51!35.20!E2F5;;chr7:50348268..50348366,+!p4@IKZF1!1.46!28.16!IKZF1;;chr17:37934204..37934241,-!p3@IKZF3!1.46!28.16!IKZF3;;chr6:91006575..91006602,-!p2@BACH2!1.44!38.72!BACH2;;chr13:41593425..41593480,-!p1@ELF1!1.43!160.16!ELF1;;chr10:94449703..94449718,+!p1@HHEX!1.43!96.80!HHEX;;chr5:158526756..158526797,-!p3@EBF1!1.41!24.64!EBF1;;chr5:88120151..88120177,-!p6@MEF2C!1.41!24.64!MEF2C;;chr8:86089531..86089544,+!p7@E2F5!1.41!24.64!E2F5;;chr19:13213704..13213726,-!p3@LYL1!1.40!31.68!LYL1;;chr4:185395590..185395627,-!p3@IRF2!1.40!29.92!IRF2;;chr2:60778035..60778060,-!p4@BCL11A!1.39!28.16!BCL11A;;chr1:25256756..25256774,-!p1@RUNX3!1.36!40.48!RUNX3;;chr7:50344289..50344323,+!p1@IKZF1!1.31!19.36!IKZF1;;chr4:185395633..185395651,-!p2@IRF2!1.27!28.16!IRF2;;chr2:100759060..100759073,-!p8@AFF3!1.27!17.60!AFF3;;chr2:68592394..68592405,+!p2@PLEK!1.27!17.60!PLEK;;chr3:71409904..71409927,-!p46@FOXP1!1.27!17.60!FOXP1;;chr17:45810594..45810608,+!p1@TBX21!1.27!17.60!TBX21;;chr14:69262947..69262986,-!p3@ZFP36L1!1.26!21.12!ZFP36L1;;chr3:71631151..71631194,-!p15@FOXP1!1.26!19.36!FOXP1;;chr19:36391434..36391450,-!p1@NFKBID!1.24!31.68!NFKBID;;chr17:38020516..38020544,-!p5@IKZF3!1.23!15.84!IKZF3;;chr5:88179017..88179046,-!p2@MEF2C!1.21!59.84!MEF2C;;chrX:101186981..101187030,-!p1@ZMAT1!1.20!47.52!ZMAT1;;chr19:36204309..36204335,+!p1@ZBTB32!1.18!14.08!ZBTB32;;chr2:60781201..60781258,-!p3@BCL11A!1.18!14.08!BCL11A;;chr4:57522513..57522548,-!p4@HOPX!1.18!14.08!HOPX;;chr6:91006503..91006517,-!p3@BACH2!1.18!14.08!BACH2;;chr11:128563948..128564003,+!p1@FLI1!1.16!161.92!FLI1;;chr7:64838786..64838809,+!p2@ZNF92!1.15!73.92!ZNF92;;chr18:52989031..52989079,-!p2@TCF4!1.14!29.92!TCF4;;chr10:94449675..94449694,+!p2@HHEX!1.13!33.44!HHEX;;chr19:42636586..42636607,-!p1@POU2F2!1.12!33.44!POU2F2;;chrX:106960249..106960260,-!p5@TSC22D3!1.12!19.36!TSC22D3;;chr9:37003148..37003152,-!p5@PAX5!1.12!12.32!PAX5;;chr7:63505799..63505904,+!p1@ZNF727!1.12!12.32!ZNF727;;chr7:77469439..77469459,+!p6@PHTF2!1.12!12.32!PHTF2;;chr11:47400062..47400077,-!p2@SPI1!1.12!12.32!SPI1;;chr19:19779619..19779670,+!p1@ZNF101!1.11!33.44!ZNF101;;chr14:75988771..75988826,+!p1@BATF!1.11!15.84!BATF;;chr6:144385698..144385742,-!p2@PLAGL1!1.10!14.08!PLAGL1;;chr2:208031542..208031595,-!p2@KLF7!1.09!79.20!KLF7;;chr19:45579725..45579743,-!p1@ZNF296!1.09!51.04!ZNF296;;chr3:18486354..18486377,-!p2@SATB1!1.09!14.08!SATB1;;chr16:3313791..3313834,+!p2@ZNF263!1.08!24.64!ZNF263;;chr18:52989001..52989030,-!p10@TCF4!1.08!12.32!TCF4;;chr2:61108695..61108753,+!p1@REL!1.06!72.16!REL;;chr19:58220517..58220583,-!p1@ZNF154!1.06!33.44!ZNF154;;chr16:85936412..85936431,+!p2@IRF8!1.06!10.56!IRF8;;chr17:38020481..38020506,-!p7@IKZF3!1.06!10.56!IKZF3;;chr19:20748574..20748599,-!p1@ZNF737!1.03!59.84!ZNF737;;chr8:81397846..81397860,+!p3@ZBTB10!1.03!12.32!ZBTB10;;chr19:57183114..57183145,-!p1@ZNF835!1.02!10.56!ZNF835;;chr6:157098579..157098634,+!p4@ARID1B!1.01!21.12!ARID1B;;chr9:117150254..117150271,-!p1@AKNA!0.99!24.64!AKNA;;chrX:106960221..106960236,-!p3@TSC22D3!0.99!24.64!TSC22D3;;chrX:56258844..56258882,+!p1@KLF8!0.99!12.32!KLF8;;chr9:37034186..37034216,-!p2@PAX5!0.99!8.80!PAX5;;chr2:231090344..231090361,-!p3@SP110!0.99!8.80!SP110;;chr17:38020607..38020621,-!p9@IKZF3!0.99!8.80!IKZF3;;chr17:56565257..56565283,-!p2@HSF5!0.99!8.80!HSF5;;chr14:64971288..64971316,-!p2@ZBTB25!0.97!26.40!ZBTB25;;chr2:145277640..145277771,-!p1@ZEB2!0.94!107.36!ZEB2;;chr10:104154246..104154347,+!p3@NFKB2!0.94!49.28!NFKB2;;chrX:131624056..131624069,-!p2@MBNL3!0.94!10.56!MBNL3;;chr2:231084659..231084721,-!p1@SP110!0.93!183.04!SP110;;chr19:11959532..11959593,+!p1@ZNF439!0.93!29.92!ZNF439;;chrX:106960180..106960197,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ZNF280D!0.48!3.52!ZNF280D;;chr19:18391708..18391737,-!p7@JUND!0.48!3.52!JUND;;chr19:53466067..53466087,-!p3@ZNF321P,p3@ZNF816-ZNF321P,p3@ZNF816!0.48!3.52!ZNF816;;chr11:85376121..85376181,-!p1@CREBZF!0.47!80.96!CREBZF;;chr19:21324829..21324855,+!p1@ZNF431!0.47!42.24!ZNF431;;chr8:71316021..71316068,-!p1@NCOA2!0.47!24.64!NCOA2;;chr10:38383255..38383324,+!p1@ZNF37A!0.47!24.64!ZNF37A;;chr19:12175535..12175554,+!p1@ZNF844!0.47!14.08!ZNF844;;chr19:22034809..22034878,-!p2@ZNF43!0.47!8.80!ZNF43;;chr19:53238260..53238312,-!p1@ZNF611!0.47!8.80!ZNF611;;chr17:7382911..7382932,-!p4@ZBTB4!0.47!5.28!ZBTB4;;chr22:29196492..29196503,-!p3@XBP1!0.47!3.52!XBP1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.46!31.68!ZC3H12A;;chr19:35168567..35168620,+!p1@ZNF302!0.46!29.92!ZNF302;;chr3:129158715..129158766,-!p2@MBD4!0.46!24.64!MBD4;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.46!24.64!ZNF595;;chr19:37825540..37825588,+!p2@HKR1!0.46!17.60!HKR1;;chr16:3285144..3285191,-!p1@ZNF200!0.46!12.32!ZNF200;;chr9:35732561..35732587,+!p3@CREB3!0.46!10.56!CREB3;;chr4:56412767..56412799,-!p3@CLOCK!0.46!5.28!CLOCK;;chr19:44905759..44905797,-!p2@ZFP112,p2@ZNF285!0.46!5.28!ZNF285;;chr9:2015275..2015287,+!p8@SMARCA2!0.46!3.52!SMARCA2;;chr16:3185051..3185068,+!p3@ZNF213!0.46!3.52!ZNF213;;chr18:3449586..3449617,+!p8@TGIF1!0.46!3.52!TGIF1;;chr7:148823485..148823510,+!p4@ZNF398!0.46!3.52!ZNF398;;chr1:168195229..168195294,+!p1@SFT2D2,p1@TBX19!0.45!116.16!TBX19;;chr14:24630465..24630531,+!p1@IRF9!0.45!98.56!IRF9;;chr4:467892..467963,-!p1@ABCA11P,p1@ZNF721!0.45!65.12!ZNF721;;chr2:48541789..48541874,+!p1@FOXN2!0.45!58.08!FOXN2;;chr16:31885093..31885165,+!p1@ZNF267!0.45!38.72!ZNF267;;chr10:38299546..38299686,+!p1@ZNF33A!0.45!36.96!ZNF33A;;chr10:96122682..96122730,-!p1@NOC3L!0.45!36.96!NOC3L;;chr14:58765217..58765301,+!p1@ARID4A!0.45!22.88!ARID4A;;chr2:208394627..208394655,+!p2@CREB1!0.45!21.12!CREB1;;chr15:43663214..43663261,-!p@chr15:43663214..43663261,-!0.45!14.08!ZSCAN29;;chr19:58514129..58514205,-!p1@ZNF606!0.45!14.08!ZNF606;;chr19:19843900..19843928,-!p1@ZNF14!0.45!12.32!ZNF14;;chr19:44507091..44507163,+!p1@ZNF230!0.45!10.56!ZNF230;;chr3:150126136..150126158,+!p4@TSC22D2!0.45!8.80!TSC22D2;;chr17:36861675..36861697,+!p3@MLLT6!0.45!5.28!MLLT6;;chr12:80084167..80084197,-!p5@PAWR!0.45!5.28!PAWR;;chr13:74708372..74708409,-!p4@KLF12!0.45!5.28!KLF12;;chrX:47696337..47696360,+!p2@ZNF81!0.45!5.28!ZNF81;;chr2:231084723..231084734,-!p4@SP110!0.45!3.52!SP110;;chr11:113930291..113930339,+!p2@ZBTB16!0.45!3.52!ZBTB16;;chr15:100106670..100106697,+!p4@MEF2A!0.45!3.52!MEF2A;;chr19:57791806..57791875,+!p1@ZNF460!0.44!29.92!ZNF460;;chr1:161015706..161015747,-!p1@USF1!0.44!29.92!USF1;;chr11:67007477..67007493,+!p2@KDM2A!0.44!21.12!KDM2A;;chr19:50169013..50169062,-!p2@IRF3!0.44!14.08!IRF3;;chr19:58400372..58400411,-!p1@ZNF814!0.44!12.32!ZNF814;;chr16:30583017..30583064,-!p1@ZNF688!0.44!12.32!ZNF688;;chr3:48282587..48282603,+!p1@ZNF589!0.44!10.56!ZNF589;;chr1:43148792..43148849,+!p2@YBX1!0.44!8.80!YBX1;;chr19:44598534..44598559,+!p2@ZNF224!0.44!7.04!ZNF224;;chr19:53193790..53193821,-!p3@ZNF83!0.44!7.04!ZNF83;;chr17:41322332..41322351,-!p4@BRCA1!0.44!5.28!BRCA1;;chr17:36861735..36861755,+!p4@MLLT6!0.44!3.52!MLLT6;;chr19:12662314..12662328,-!p2@ZNF564!0.44!3.52!ZNF564;;chr19:37997812..37997866,+!p1@ZNF793!0.44!3.52!ZNF793;;chr14:90085820..90085840,-!p6@FOXN3!0.44!1.76!FOXN3;;chr15:100106705..100106716,+!p10@MEF2A!0.44!1.76!MEF2A;;chr16:88752836..88752852,-!p3@SNAI3!0.44!1.76!SNAI3;;chr17:37934188..37934202,-!p8@IKZF3!0.44!1.76!IKZF3;;chr17:37934466..37934481,-!p13@IKZF3!0.44!1.76!IKZF3;;chr17:42295682..42295731,-!p17@UBTF!0.44!1.76!UBTF;;chr17:47439327..47439336,-!p4@ZNF652!0.44!1.76!ZNF652;;chr17:4981570..4981591,+!p3@ZFP3!0.44!1.76!ZFP3;;chr18:52988979..52988993,-!p18@TCF4!0.44!1.76!TCF4;;chr18:77155942..77155951,+!p3@NFATC1!0.44!1.76!NFATC1;;chr19:12734557..12734565,+!p4@ZNF791!0.44!1.76!ZNF791;;chr19:16435735..16435773,+!p4@KLF2!0.44!1.76!KLF2;;chr19:23299851..23299880,+!p2@ZNF730!0.44!1.76!ZNF730;;chr22:42269579..42269583,+!p13@SREBF2!0.44!1.76!SREBF2;;chr2:16080635..16080650,+!p4@MYCN!0.44!1.76!MYCN;;chr2:185463521..185463557,+!p3@ZNF804A!0.44!1.76!ZNF804A;;chr2:208394455..208394471,+!p7@CREB1!0.44!1.76!CREB1;;chr2:208415075..208415079,+!p8@CREB1!0.44!1.76!CREB1;;chr2:231134598..231134640,+!p6@SP140!0.44!1.76!SP140;;chr2:238600998..238601013,+!p5@LRRFIP1!0.44!1.76!LRRFIP1;;chr2:242556880..242556899,-!p5@THAP4!0.44!1.76!THAP4;;chr2:24714729..24714761,+!p1@NCOA1!0.44!1.76!NCOA1;;chr2:45168856..45168867,+!p7@SIX3!0.44!1.76!SIX3;;chr2:60780730..60780742,-!p5@BCL11A!0.44!1.76!BCL11A;;chr2:61108217..61108242,+!p9@REL!0.44!1.76!REL;;chr2:97202991..97203043,+!p3@ARID5A!0.44!1.76!ARID5A;;chr3:114173558..114173571,-!p19@ZBTB20!0.44!1.76!ZBTB20;;chr3:114173654..114173696,-!p12@ZBTB20!0.44!1.76!ZBTB20;;chr3:114173720..114173794,-!p6@ZBTB20!0.44!1.76!ZBTB20;;chr3:141103634..141103665,+!p18@ZBTB38!0.44!1.76!ZBTB38;;chr3:18480151..18480162,-!p18@SATB1!0.44!1.76!SATB1;;chr3:24536231..24536249,-!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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000236;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
+|ffid_belonging_in_development=CL:0000134,CL:0000051
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg38.nobarcode.ctss.bed.gz
 |id=FF:12189-129B2
-|is_a=EFO:0002091;;FF:0000002;;FF:0000025;;FF:0000210
+|is_a=EFO:0002091;;FF:0000025;;FF:0000210
+|is_obsolete=
+|library_id=CNhs12177!RDhi10007
+|library_id_phase_based=2:CNhs12177
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12189
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12189
 |name=CD19+ B Cells (pluriselect), donor090309, donation1
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12177,LSID975,release011,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=129
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=1.26575
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.05047487593927e-205!GO:0043227;membrane-bound organelle;1.0596010931349e-185!GO:0043231;intracellular membrane-bound organelle;2.24372876984498e-185!GO:0043226;organelle;9.04803641727746e-172!GO:0043229;intracellular organelle;2.53975363227452e-171!GO:0005737;cytoplasm;3.5735246873938e-131!GO:0044422;organelle part;2.13738012328962e-112!GO:0044446;intracellular organelle part;1.33966121605593e-110!GO:0044444;cytoplasmic part;2.58353932505496e-100!GO:0032991;macromolecular complex;1.71470054320699e-99!GO:0044237;cellular metabolic process;2.40244902805994e-88!GO:0005634;nucleus;8.91919358736044e-88!GO:0043170;macromolecule metabolic process;8.26848646146123e-85!GO:0044238;primary metabolic process;2.37566664089188e-84!GO:0030529;ribonucleoprotein complex;1.17114507160883e-83!GO:0003723;RNA binding;2.01524159347579e-73!GO:0044428;nuclear part;3.86497902612995e-72!GO:0043233;organelle lumen;1.09481316455109e-66!GO:0031974;membrane-enclosed lumen;1.09481316455109e-66!GO:0005739;mitochondrion;2.96249233216864e-62!GO:0010467;gene expression;1.01843684887737e-56!GO:0043283;biopolymer metabolic process;1.78531104739084e-56!GO:0006396;RNA processing;3.02428844679951e-54!GO:0006412;translation;2.10649376858712e-52!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.66891645297268e-52!GO:0043234;protein complex;1.44054099964223e-50!GO:0005840;ribosome;1.9413283359197e-48!GO:0005515;protein binding;1.89889599374374e-44!GO:0031981;nuclear lumen;2.82924260600013e-43!GO:0016071;mRNA metabolic process;4.00791481378839e-43!GO:0033036;macromolecule localization;4.08752503699366e-43!GO:0044429;mitochondrial part;1.90154640592546e-42!GO:0015031;protein transport;4.03147586959149e-42!GO:0003735;structural constituent of ribosome;7.15627921371832e-42!GO:0019538;protein metabolic process;1.47913171240954e-41!GO:0045184;establishment of protein localization;8.29646225552921e-41!GO:0008104;protein localization;2.60438060957889e-40!GO:0008380;RNA splicing;7.3004146291985e-40!GO:0044267;cellular protein metabolic process;8.60569084646196e-40!GO:0031090;organelle membrane;2.06902420213252e-39!GO:0044260;cellular macromolecule metabolic process;8.8815560244825e-39!GO:0033279;ribosomal subunit;9.92266568695566e-38!GO:0031967;organelle envelope;1.11421754993606e-37!GO:0006397;mRNA processing;1.8962110640494e-37!GO:0031975;envelope;2.17330308108472e-37!GO:0009059;macromolecule biosynthetic process;3.06855463489447e-37!GO:0003676;nucleic acid binding;5.1186460227048e-36!GO:0005829;cytosol;4.19254744788336e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.4418218586709e-32!GO:0044249;cellular biosynthetic process;9.25989240782609e-32!GO:0009058;biosynthetic process;2.71380149164568e-31!GO:0005654;nucleoplasm;4.51919477384371e-29!GO:0046907;intracellular transport;6.23195376938933e-29!GO:0016070;RNA metabolic process;8.04303917425574e-29!GO:0005681;spliceosome;2.19943813479245e-28!GO:0065003;macromolecular complex assembly;3.84719050704485e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.39136536264299e-28!GO:0006886;intracellular protein transport;1.16867889599196e-27!GO:0006259;DNA metabolic process;2.41032236591836e-26!GO:0019866;organelle inner membrane;5.66021827955459e-26!GO:0044445;cytosolic part;1.38261419783312e-25!GO:0005740;mitochondrial envelope;2.51763726268316e-25!GO:0016043;cellular component organization and biogenesis;3.30948652163812e-25!GO:0031966;mitochondrial membrane;2.6950058233237e-24!GO:0022607;cellular component assembly;6.67013737399761e-24!GO:0005743;mitochondrial inner membrane;1.03833981292496e-23!GO:0044451;nucleoplasm part;2.3960474846485e-22!GO:0006119;oxidative phosphorylation;1.8558836930611e-21!GO:0051649;establishment of cellular localization;2.61696530833928e-21!GO:0051641;cellular localization;5.8849269972925e-21!GO:0006512;ubiquitin cycle;6.63423568028626e-21!GO:0006996;organelle organization and biogenesis;2.01017211333773e-20!GO:0015935;small ribosomal subunit;2.36486146795621e-20!GO:0022618;protein-RNA complex assembly;4.17139428207555e-20!GO:0031980;mitochondrial lumen;7.96599396479156e-20!GO:0005759;mitochondrial matrix;7.96599396479156e-20!GO:0000166;nucleotide binding;2.05851469056215e-19!GO:0044455;mitochondrial membrane part;5.43072304082718e-19!GO:0044265;cellular macromolecule catabolic process;1.01957809909778e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.11988470665304e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;1.36391609270932e-18!GO:0016462;pyrophosphatase activity;1.66145752165942e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.88067672855989e-18!GO:0019941;modification-dependent protein catabolic process;1.91528843263476e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.91528843263476e-18!GO:0015934;large ribosomal subunit;1.91528843263476e-18!GO:0017111;nucleoside-triphosphatase activity;3.35941196005546e-18!GO:0044257;cellular protein catabolic process;3.42834096372074e-18!GO:0006511;ubiquitin-dependent protein catabolic process;3.72212112251841e-18!GO:0043285;biopolymer catabolic process;4.65441539815959e-18!GO:0016874;ligase activity;1.89540691759314e-17!GO:0043228;non-membrane-bound organelle;3.86900982459745e-17!GO:0043232;intracellular non-membrane-bound organelle;3.86900982459745e-17!GO:0008134;transcription factor binding;6.84435655878174e-17!GO:0006605;protein targeting;2.15709250944719e-16!GO:0006974;response to DNA damage stimulus;2.23116378645203e-16!GO:0005746;mitochondrial respiratory chain;2.52834655188619e-16!GO:0016604;nuclear body;3.97392175086281e-16!GO:0005730;nucleolus;4.41277049733754e-16!GO:0006457;protein folding;5.29887360862272e-16!GO:0006915;apoptosis;7.28042067722255e-16!GO:0012501;programmed cell death;7.7307284979407e-16!GO:0009057;macromolecule catabolic process;1.3297326391765e-15!GO:0008135;translation factor activity, nucleic acid binding;4.66536838669885e-15!GO:0012505;endomembrane system;5.08820988272718e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.76225758777869e-15!GO:0000502;proteasome complex (sensu Eukaryota);6.78333541923714e-15!GO:0008219;cell death;1.56953419253341e-14!GO:0016265;death;1.56953419253341e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.56953419253341e-14!GO:0003954;NADH dehydrogenase activity;1.56953419253341e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.56953419253341e-14!GO:0005761;mitochondrial ribosome;1.94941377740651e-14!GO:0000313;organellar ribosome;1.94941377740651e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.3892841304885e-14!GO:0030163;protein catabolic process;2.902854757095e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;2.94793847301286e-14!GO:0000375;RNA splicing, via transesterification reactions;2.94793847301286e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.94793847301286e-14!GO:0016887;ATPase activity;3.40587360188467e-14!GO:0043412;biopolymer modification;3.82752758557228e-14!GO:0044248;cellular catabolic process;6.74304479552642e-14!GO:0032553;ribonucleotide binding;6.74304479552642e-14!GO:0032555;purine ribonucleotide binding;6.74304479552642e-14!GO:0042623;ATPase activity, coupled;1.08754064172658e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.59029680889849e-13!GO:0006281;DNA repair;1.96134547380277e-13!GO:0017076;purine nucleotide binding;2.50369207382415e-13!GO:0005635;nuclear envelope;5.30243322745412e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;5.40594969253505e-13!GO:0016607;nuclear speck;5.972739772858e-13!GO:0042775;organelle ATP synthesis coupled electron transport;7.4341929499512e-13!GO:0042773;ATP synthesis coupled electron transport;7.4341929499512e-13!GO:0006413;translational initiation;9.32283433768852e-13!GO:0042254;ribosome biogenesis and assembly;9.7950250017253e-13!GO:0005524;ATP binding;1.0346295572457e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.11501199382145e-12!GO:0045271;respiratory chain complex I;1.11501199382145e-12!GO:0005747;mitochondrial respiratory chain complex I;1.11501199382145e-12!GO:0031965;nuclear membrane;1.24641959048265e-12!GO:0006323;DNA packaging;1.93276727559456e-12!GO:0032559;adenyl ribonucleotide binding;2.1623144092924e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.53811076304589e-12!GO:0051276;chromosome organization and biogenesis;3.84336518948092e-12!GO:0006446;regulation of translational initiation;5.01693756227081e-12!GO:0006464;protein modification process;7.82383849319708e-12!GO:0030554;adenyl nucleotide binding;1.10627408663723e-11!GO:0003743;translation initiation factor activity;1.32754523484249e-11!GO:0003712;transcription cofactor activity;2.10010430448805e-11!GO:0006913;nucleocytoplasmic transport;3.00697668423934e-11!GO:0043687;post-translational protein modification;3.08519693385419e-11!GO:0051082;unfolded protein binding;3.9486022101623e-11!GO:0051169;nuclear transport;4.86400742946653e-11!GO:0005694;chromosome;5.73171928611146e-11!GO:0048770;pigment granule;6.70830659840189e-11!GO:0042470;melanosome;6.70830659840189e-11!GO:0042981;regulation of apoptosis;6.76412052782486e-11!GO:0009719;response to endogenous stimulus;9.8868009717676e-11!GO:0043067;regulation of programmed cell death;1.06495766434463e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.45880459951958e-10!GO:0051186;cofactor metabolic process;1.88696164461552e-10!GO:0050794;regulation of cellular process;2.88262622759279e-10!GO:0004386;helicase activity;3.44189514879628e-10!GO:0008639;small protein conjugating enzyme activity;3.62080033365861e-10!GO:0006333;chromatin assembly or disassembly;4.30318643072008e-10!GO:0004842;ubiquitin-protein ligase activity;4.91850017280924e-10!GO:0048193;Golgi vesicle transport;5.74341268382388e-10!GO:0015078;hydrogen ion transmembrane transporter activity;6.8460101192112e-10!GO:0017038;protein import;7.27218899288923e-10!GO:0044453;nuclear membrane part;7.9176056068783e-10!GO:0009259;ribonucleotide metabolic process;8.13182504582855e-10!GO:0019787;small conjugating protein ligase activity;9.05818882187498e-10!GO:0019829;cation-transporting ATPase activity;1.11739360118282e-09!GO:0007049;cell cycle;1.22687076264396e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.60303339584725e-09!GO:0019222;regulation of metabolic process;2.39762680045099e-09!GO:0009260;ribonucleotide biosynthetic process;4.03892820083709e-09!GO:0006163;purine nucleotide metabolic process;4.03892820083709e-09!GO:0008026;ATP-dependent helicase activity;4.46611551845458e-09!GO:0016568;chromatin modification;4.67322205335989e-09!GO:0006164;purine nucleotide biosynthetic process;5.0365575656913e-09!GO:0044427;chromosomal part;5.69121617495841e-09!GO:0016072;rRNA metabolic process;5.79736769297482e-09!GO:0016787;hydrolase activity;5.90545672460933e-09!GO:0005783;endoplasmic reticulum;5.90573636008283e-09!GO:0006364;rRNA processing;7.80712343367754e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.96000201623866e-09!GO:0065004;protein-DNA complex assembly;8.17939754765588e-09!GO:0005839;proteasome core complex (sensu Eukaryota);8.85610828997017e-09!GO:0009150;purine ribonucleotide metabolic process;9.74545859404181e-09!GO:0006399;tRNA metabolic process;1.09424423980748e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.17040763188122e-08!GO:0005643;nuclear pore;1.27278120454698e-08!GO:0044432;endoplasmic reticulum part;1.39052369423143e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.59185891035603e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.73688022764402e-08!GO:0065002;intracellular protein transport across a membrane;2.36451659760341e-08!GO:0006732;coenzyme metabolic process;2.57980541531082e-08!GO:0005794;Golgi apparatus;2.58759963834951e-08!GO:0000785;chromatin;2.80635624267131e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.61430739606488e-08!GO:0004298;threonine endopeptidase activity;3.74803248092208e-08!GO:0015986;ATP synthesis coupled proton transport;4.85964569769632e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.85964569769632e-08!GO:0031323;regulation of cellular metabolic process;5.64694427576143e-08!GO:0003713;transcription coactivator activity;6.20212838262379e-08!GO:0016881;acid-amino acid ligase activity;6.23804070037382e-08!GO:0008565;protein transporter activity;7.38294821062385e-08!GO:0050657;nucleic acid transport;9.30380162015699e-08!GO:0051236;establishment of RNA localization;9.30380162015699e-08!GO:0050658;RNA transport;9.30380162015699e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.42250603734639e-08!GO:0006403;RNA localization;9.4569717996965e-08!GO:0016192;vesicle-mediated transport;9.54547335494416e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.42221307273185e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.54566351119434e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.54566351119434e-07!GO:0046930;pore complex;1.59821054039505e-07!GO:0009056;catabolic process;1.63468562998145e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.64176990344246e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.64176990344246e-07!GO:0009060;aerobic respiration;1.9123852306897e-07!GO:0022402;cell cycle process;1.9123852306897e-07!GO:0051246;regulation of protein metabolic process;2.08613631489192e-07!GO:0006754;ATP biosynthetic process;2.35144612746817e-07!GO:0006753;nucleoside phosphate metabolic process;2.35144612746817e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.51593786187822e-07!GO:0009141;nucleoside triphosphate metabolic process;2.61954116170122e-07!GO:0051726;regulation of cell cycle;2.64362401741842e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.75508035010304e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.75508035010304e-07!GO:0000074;regulation of progression through cell cycle;2.96016482924562e-07!GO:0006793;phosphorus metabolic process;3.36191162219425e-07!GO:0006796;phosphate metabolic process;3.36191162219425e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.56544986023907e-07!GO:0005789;endoplasmic reticulum membrane;4.72370397355396e-07!GO:0000245;spliceosome assembly;4.73948457179269e-07!GO:0046034;ATP metabolic process;6.19430585304802e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.63784835983981e-07!GO:0007005;mitochondrion organization and biogenesis;6.99603045152143e-07!GO:0006350;transcription;8.82252882402537e-07!GO:0043566;structure-specific DNA binding;9.81791428383238e-07!GO:0045333;cellular respiration;1.03980653362788e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.05038900412425e-06!GO:0006334;nucleosome assembly;1.12666136657124e-06!GO:0009055;electron carrier activity;1.20073191647606e-06!GO:0043069;negative regulation of programmed cell death;1.27632255840054e-06!GO:0031497;chromatin assembly;1.35711870513832e-06!GO:0050789;regulation of biological process;1.42714802896792e-06!GO:0045259;proton-transporting ATP synthase complex;1.61219849977311e-06!GO:0043066;negative regulation of apoptosis;1.620331336317e-06!GO:0016779;nucleotidyltransferase activity;1.67044724856291e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.74468330131442e-06!GO:0015399;primary active transmembrane transporter activity;1.74468330131442e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.79020584236633e-06!GO:0005768;endosome;1.87166874040235e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.90254380114035e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.04340161489679e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.04340161489679e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.04340161489679e-06!GO:0016310;phosphorylation;2.11832420121328e-06!GO:0010468;regulation of gene expression;2.48351499006053e-06!GO:0051028;mRNA transport;2.90950596722882e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.91905862842388e-06!GO:0008270;zinc ion binding;2.98909468963232e-06!GO:0051170;nuclear import;3.45026610949482e-06!GO:0043038;amino acid activation;3.91740268514818e-06!GO:0006418;tRNA aminoacylation for protein translation;3.91740268514818e-06!GO:0043039;tRNA aminoacylation;3.91740268514818e-06!GO:0006606;protein import into nucleus;5.07201831587378e-06!GO:0006461;protein complex assembly;5.21576929469411e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.39087715040439e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.14565415259567e-06!GO:0006613;cotranslational protein targeting to membrane;6.75227849696469e-06!GO:0005770;late endosome;7.15462939454523e-06!GO:0030120;vesicle coat;7.2334271932696e-06!GO:0030662;coated vesicle membrane;7.2334271932696e-06!GO:0009615;response to virus;7.39622484379806e-06!GO:0032446;protein modification by small protein conjugation;8.29743315634982e-06!GO:0006366;transcription from RNA polymerase II promoter;9.14572916498554e-06!GO:0016563;transcription activator activity;9.31477843913165e-06!GO:0000151;ubiquitin ligase complex;9.62268163863093e-06!GO:0003724;RNA helicase activity;9.92532176199472e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.01950794586789e-05!GO:0051188;cofactor biosynthetic process;1.13189596206109e-05!GO:0006099;tricarboxylic acid cycle;1.2162967711634e-05!GO:0046356;acetyl-CoA catabolic process;1.2162967711634e-05!GO:0006260;DNA replication;1.24000388454613e-05!GO:0006916;anti-apoptosis;1.25297827216685e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.32908279854e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.61113294922159e-05!GO:0005793;ER-Golgi intermediate compartment;1.65160739241838e-05!GO:0016564;transcription repressor activity;1.68058543808873e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;1.68658561694885e-05!GO:0048475;coated membrane;1.68658561694885e-05!GO:0030117;membrane coat;1.68658561694885e-05!GO:0016567;protein ubiquitination;1.86803121686562e-05!GO:0006084;acetyl-CoA metabolic process;1.88378715973009e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.19386227202259e-05!GO:0009117;nucleotide metabolic process;2.46795932227859e-05!GO:0007243;protein kinase cascade;2.47522844151341e-05!GO:0046914;transition metal ion binding;2.59039888402269e-05!GO:0045786;negative regulation of progression through cell cycle;2.68018191955886e-05!GO:0003697;single-stranded DNA binding;3.43030641366797e-05!GO:0031324;negative regulation of cellular metabolic process;3.45528669478491e-05!GO:0065009;regulation of a molecular function;3.99481594288075e-05!GO:0005762;mitochondrial large ribosomal subunit;4.32409575249992e-05!GO:0000315;organellar large ribosomal subunit;4.32409575249992e-05!GO:0006612;protein targeting to membrane;4.47172982283457e-05!GO:0006752;group transfer coenzyme metabolic process;4.87505250874059e-05!GO:0006417;regulation of translation;5.55807511755362e-05!GO:0019899;enzyme binding;5.58022503998734e-05!GO:0009109;coenzyme catabolic process;6.13290331182123e-05!GO:0009108;coenzyme biosynthetic process;6.32698009875441e-05!GO:0042613;MHC class II protein complex;6.44369920867488e-05!GO:0016740;transferase activity;6.8432448549299e-05!GO:0048523;negative regulation of cellular process;6.85756983450989e-05!GO:0006401;RNA catabolic process;7.09437907292109e-05!GO:0031072;heat shock protein binding;7.41313571876487e-05!GO:0005773;vacuole;7.45663657641208e-05!GO:0051187;cofactor catabolic process;7.64257186237575e-05!GO:0000323;lytic vacuole;0.000105439240409699!GO:0005764;lysosome;0.000105439240409699!GO:0043681;protein import into mitochondrion;0.000132296612978523!GO:0000278;mitotic cell cycle;0.000132607197040129!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000133081065635999!GO:0008632;apoptotic program;0.000144001803964875!GO:0032774;RNA biosynthetic process;0.000144740250412696!GO:0000314;organellar small ribosomal subunit;0.000149257971531069!GO:0005763;mitochondrial small ribosomal subunit;0.000149257971531069!GO:0045449;regulation of transcription;0.00015056634154633!GO:0043065;positive regulation of apoptosis;0.000155904064802205!GO:0000786;nucleosome;0.00016204647441985!GO:0005813;centrosome;0.000169439047541619!GO:0006351;transcription, DNA-dependent;0.000173260513264802!GO:0044431;Golgi apparatus part;0.000188415048322448!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000190380959607328!GO:0008186;RNA-dependent ATPase activity;0.000192092029710654!GO:0006818;hydrogen transport;0.000196887561738188!GO:0051168;nuclear export;0.000197046326092722!GO:0016197;endosome transport;0.000198519358915242!GO:0016481;negative regulation of transcription;0.000211364166975293!GO:0015992;proton transport;0.000213354021244417!GO:0043068;positive regulation of programmed cell death;0.00021772930566083!GO:0031326;regulation of cellular biosynthetic process;0.000225907071337384!GO:0005885;Arp2/3 protein complex;0.000232762543890892!GO:0044440;endosomal part;0.000233113069166695!GO:0010008;endosome membrane;0.000233113069166695!GO:0042113;B cell activation;0.000250328026732726!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000325405816716343!GO:0022890;inorganic cation transmembrane transporter activity;0.000347650624875943!GO:0003714;transcription corepressor activity;0.000351000993807365!GO:0003899;DNA-directed RNA polymerase activity;0.000376505992850211!GO:0003924;GTPase activity;0.000381649630629845!GO:0008234;cysteine-type peptidase activity;0.000388534707405755!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000404265043158565!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000427725291564344!GO:0006917;induction of apoptosis;0.000441385528642555!GO:0003684;damaged DNA binding;0.000463406589394666!GO:0005815;microtubule organizing center;0.000468374809977793!GO:0065007;biological regulation;0.00047795717421922!GO:0006402;mRNA catabolic process;0.000497347280416674!GO:0004004;ATP-dependent RNA helicase activity;0.000580404793080703!GO:0012502;induction of programmed cell death;0.000592092893835805!GO:0043623;cellular protein complex assembly;0.000600134991211424!GO:0043021;ribonucleoprotein binding;0.000604503022242254!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000604693316640815!GO:0003690;double-stranded DNA binding;0.000621083332329733!GO:0009892;negative regulation of metabolic process;0.000627516565897678!GO:0007006;mitochondrial membrane organization and biogenesis;0.000661955281696314!GO:0048519;negative regulation of biological process;0.000672070084128551!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000791610156478626!GO:0045454;cell redox homeostasis;0.000875688748971979!GO:0006289;nucleotide-excision repair;0.000881636082688754!GO:0003729;mRNA binding;0.000971797968885975!GO:0009889;regulation of biosynthetic process;0.00100526598130607!GO:0006310;DNA recombination;0.00101449350919214!GO:0005667;transcription factor complex;0.00102093333375261!GO:0006839;mitochondrial transport;0.0010567591717084!GO:0007264;small GTPase mediated signal transduction;0.00107753261052174!GO:0006261;DNA-dependent DNA replication;0.00107753261052174!GO:0006383;transcription from RNA polymerase III promoter;0.00109853619935607!GO:0004518;nuclease activity;0.00110690004649548!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00115455177733596!GO:0015002;heme-copper terminal oxidase activity;0.00115455177733596!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00115455177733596!GO:0004129;cytochrome-c oxidase activity;0.00115455177733596!GO:0009165;nucleotide biosynthetic process;0.00136677997616531!GO:0016363;nuclear matrix;0.00136929636431446!GO:0008033;tRNA processing;0.00143146855543473!GO:0004527;exonuclease activity;0.0015224124673093!GO:0007265;Ras protein signal transduction;0.00152992219675471!GO:0051789;response to protein stimulus;0.0015415563229017!GO:0006986;response to unfolded protein;0.0015415563229017!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157553178812046!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157553178812046!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157553178812046!GO:0005525;GTP binding;0.00161478217968237!GO:0005769;early endosome;0.00162984273166317!GO:0050790;regulation of catalytic activity;0.00164321203699457!GO:0031902;late endosome membrane;0.00164785138397609!GO:0006626;protein targeting to mitochondrion;0.00168030243422794!GO:0005048;signal sequence binding;0.00176829149718028!GO:0033116;ER-Golgi intermediate compartment membrane;0.00187198829027364!GO:0000087;M phase of mitotic cell cycle;0.00208456764023591!GO:0005798;Golgi-associated vesicle;0.00209973586851624!GO:0008654;phospholipid biosynthetic process;0.00213512105557506!GO:0048500;signal recognition particle;0.00232098344489848!GO:0043488;regulation of mRNA stability;0.00242276809341261!GO:0043487;regulation of RNA stability;0.00242276809341261!GO:0007242;intracellular signaling cascade;0.00243435263905992!GO:0006352;transcription initiation;0.00244055092786983!GO:0006091;generation of precursor metabolites and energy;0.00245283477618543!GO:0051252;regulation of RNA metabolic process;0.00249361829538955!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00256555339824566!GO:0006355;regulation of transcription, DNA-dependent;0.00265966832031479!GO:0003677;DNA binding;0.00267541044365301!GO:0016741;transferase activity, transferring one-carbon groups;0.00270917356147572!GO:0005684;U2-dependent spliceosome;0.00273884364875802!GO:0051427;hormone receptor binding;0.00279742864720003!GO:0008168;methyltransferase activity;0.00285700177246309!GO:0051920;peroxiredoxin activity;0.00290392634971114!GO:0007067;mitosis;0.00292858106284686!GO:0005637;nuclear inner membrane;0.00320504030793171!GO:0006891;intra-Golgi vesicle-mediated transport;0.00320504030793171!GO:0022403;cell cycle phase;0.00326984026561704!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00339965438424493!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00339965438424493!GO:0000139;Golgi membrane;0.00363109865874964!GO:0006302;double-strand break repair;0.00370357961487469!GO:0007034;vacuolar transport;0.0038199983958517!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00389800723572993!GO:0045047;protein targeting to ER;0.00389800723572993!GO:0048471;perinuclear region of cytoplasm;0.00404117492633903!GO:0004674;protein serine/threonine kinase activity;0.00418261168054476!GO:0004532;exoribonuclease activity;0.00439456478156859!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00439456478156859!GO:0051301;cell division;0.00455724425428405!GO:0035257;nuclear hormone receptor binding;0.00470235912027052!GO:0031625;ubiquitin protein ligase binding;0.00481195478561652!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00484868830265769!GO:0006414;translational elongation;0.00507415851405903!GO:0006950;response to stress;0.00519269724995837!GO:0009967;positive regulation of signal transduction;0.00520711171771862!GO:0008312;7S RNA binding;0.00524667300015577!GO:0003711;transcription elongation regulator activity;0.00529086216445185!GO:0047485;protein N-terminus binding;0.00545225684230769!GO:0016584;nucleosome positioning;0.00580804599830002!GO:0005774;vacuolar membrane;0.00618594391934802!GO:0042802;identical protein binding;0.00619071584642709!GO:0016251;general RNA polymerase II transcription factor activity;0.00619085001409!GO:0030658;transport vesicle membrane;0.00658834469972445!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0066864985626603!GO:0048522;positive regulation of cellular process;0.00682961922871929!GO:0016605;PML body;0.00684373242475874!GO:0006672;ceramide metabolic process;0.00700886719295912!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0070979301200932!GO:0045947;negative regulation of translational initiation;0.00735304972447423!GO:0030137;COPI-coated vesicle;0.00766611172737251!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00782505794320627!GO:0051336;regulation of hydrolase activity;0.00847926810522513!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00858911791637038!GO:0016859;cis-trans isomerase activity;0.00876245403637626!GO:0030384;phosphoinositide metabolic process;0.00884515450232563!GO:0044452;nucleolar part;0.00886096215586063!GO:0030663;COPI coated vesicle membrane;0.00886148156359558!GO:0030126;COPI vesicle coat;0.00886148156359558!GO:0046474;glycerophospholipid biosynthetic process;0.00895200352867028!GO:0003725;double-stranded RNA binding;0.00902281426377766!GO:0006650;glycerophospholipid metabolic process;0.00904725866329607!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00906747411927933!GO:0045045;secretory pathway;0.00914142237251041!GO:0032940;secretion by cell;0.00954241446546612!GO:0046649;lymphocyte activation;0.00955264045127465!GO:0008408;3'-5' exonuclease activity;0.00981386727509763!GO:0004197;cysteine-type endopeptidase activity;0.00981434857138648!GO:0005657;replication fork;0.0103024289318992!GO:0008047;enzyme activator activity;0.0105674003390785!GO:0043281;regulation of caspase activity;0.010616526320661!GO:0044437;vacuolar part;0.0108145331152755!GO:0031252;leading edge;0.0108624228358341!GO:0050871;positive regulation of B cell activation;0.0108858099105362!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0109385652008857!GO:0032561;guanyl ribonucleotide binding;0.0112924142264964!GO:0019001;guanyl nucleotide binding;0.0112924142264964!GO:0009451;RNA modification;0.0115848187653335!GO:0030433;ER-associated protein catabolic process;0.0115848187653335!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0115848187653335!GO:0003746;translation elongation factor activity;0.0123695822400484!GO:0016272;prefoldin complex;0.0131776423908617!GO:0030518;steroid hormone receptor signaling pathway;0.0131776423908617!GO:0051539;4 iron, 4 sulfur cluster binding;0.0132004776449867!GO:0030660;Golgi-associated vesicle membrane;0.0132004776449867!GO:0031901;early endosome membrane;0.013324221294156!GO:0006376;mRNA splice site selection;0.0135545846340394!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0135545846340394!GO:0006405;RNA export from nucleus;0.0140879979323372!GO:0046519;sphingoid metabolic process;0.0142444341479716!GO:0006595;polyamine metabolic process;0.0147512828009345!GO:0006611;protein export from nucleus;0.0153190822377941!GO:0019843;rRNA binding;0.0154243940889492!GO:0006284;base-excision repair;0.0155372421003012!GO:0008022;protein C-terminus binding;0.0163172215748624!GO:0015923;mannosidase activity;0.0163958537512883!GO:0000178;exosome (RNase complex);0.0166065037351866!GO:0046489;phosphoinositide biosynthetic process;0.0169891356618464!GO:0015980;energy derivation by oxidation of organic compounds;0.0171267799967592!GO:0000287;magnesium ion binding;0.0173718421708569!GO:0030118;clathrin coat;0.0175866376006044!GO:0003678;DNA helicase activity;0.0177380196610768!GO:0051540;metal cluster binding;0.0178899053472636!GO:0051536;iron-sulfur cluster binding;0.0178899053472636!GO:0051087;chaperone binding;0.0178958017855292!GO:0000118;histone deacetylase complex;0.0181179241524416!GO:0043087;regulation of GTPase activity;0.0183087051545208!GO:0030521;androgen receptor signaling pathway;0.0183087051545208!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0184625097634629!GO:0045892;negative regulation of transcription, DNA-dependent;0.0184981054313473!GO:0046966;thyroid hormone receptor binding;0.0193047269344082!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0193434324175539!GO:0005741;mitochondrial outer membrane;0.0193624002148093!GO:0019783;small conjugating protein-specific protease activity;0.019484887267429!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0206374525941826!GO:0010257;NADH dehydrogenase complex assembly;0.0206374525941826!GO:0033108;mitochondrial respiratory chain complex assembly;0.0206374525941826!GO:0006919;caspase activation;0.0206967240418041!GO:0005765;lysosomal membrane;0.0216253510125317!GO:0007041;lysosomal transport;0.0216319231527745!GO:0000049;tRNA binding;0.0216319231527745!GO:0051052;regulation of DNA metabolic process;0.0217263709347692!GO:0030880;RNA polymerase complex;0.0217263709347692!GO:0000279;M phase;0.021734399586065!GO:0008139;nuclear localization sequence binding;0.021822606677371!GO:0004843;ubiquitin-specific protease activity;0.0220009023057049!GO:0032395;MHC class II receptor activity;0.0220992830165589!GO:0018193;peptidyl-amino acid modification;0.0225040652820612!GO:0005869;dynactin complex;0.0231825611291634!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0231995794438266!GO:0015631;tubulin binding;0.0233865404050281!GO:0008017;microtubule binding;0.0234460138294472!GO:0000738;DNA catabolic process, exonucleolytic;0.0238912776165949!GO:0016491;oxidoreductase activity;0.0246690630001976!GO:0004576;oligosaccharyl transferase activity;0.0246690630001976!GO:0000209;protein polyubiquitination;0.0249148130373961!GO:0043022;ribosome binding;0.0249647060753381!GO:0032200;telomere organization and biogenesis;0.0249957153082482!GO:0000723;telomere maintenance;0.0249957153082482!GO:0016853;isomerase activity;0.02503920836188!GO:0032259;methylation;0.0252202942388855!GO:0046467;membrane lipid biosynthetic process;0.0253711195983614!GO:0009116;nucleoside metabolic process;0.0254025911603184!GO:0006607;NLS-bearing substrate import into nucleus;0.0254371242104727!GO:0000175;3'-5'-exoribonuclease activity;0.0255451140411852!GO:0005832;chaperonin-containing T-complex;0.0257977948874158!GO:0030695;GTPase regulator activity;0.0259388372040703!GO:0005083;small GTPase regulator activity;0.0267182319231333!GO:0042824;MHC class I peptide loading complex;0.0268940916966106!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.026941802751689!GO:0008097;5S rRNA binding;0.0270836955400042!GO:0008180;signalosome;0.0276127898423285!GO:0031124;mRNA 3'-end processing;0.028465492054059!GO:0007040;lysosome organization and biogenesis;0.0284706737320328!GO:0045730;respiratory burst;0.028678810415303!GO:0019883;antigen processing and presentation of endogenous antigen;0.028678810415303!GO:0019882;antigen processing and presentation;0.028678810415303!GO:0000059;protein import into nucleus, docking;0.0287950887541666!GO:0008287;protein serine/threonine phosphatase complex;0.029111247843059!GO:0043414;biopolymer methylation;0.0292590760327979!GO:0030125;clathrin vesicle coat;0.029588030296502!GO:0030665;clathrin coated vesicle membrane;0.029588030296502!GO:0031968;organelle outer membrane;0.0302424223695604!GO:0005521;lamin binding;0.0306892239256331!GO:0005689;U12-dependent spliceosome;0.0309523839622842!GO:0019814;immunoglobulin complex;0.0310016432452836!GO:0019815;B cell receptor complex;0.0310016432452836!GO:0043550;regulation of lipid kinase activity;0.0315380437265804!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0322079062105228!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.032325629232569!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0330133914926024!GO:0008538;proteasome activator activity;0.0336675354082037!GO:0016566;specific transcriptional repressor activity;0.0340366522057514!GO:0031988;membrane-bound vesicle;0.0341502616770807!GO:0046979;TAP2 binding;0.0343005235000543!GO:0046977;TAP binding;0.0343005235000543!GO:0046978;TAP1 binding;0.0343005235000543!GO:0030258;lipid modification;0.034325101156762!GO:0005669;transcription factor TFIID complex;0.034379621275485!GO:0004402;histone acetyltransferase activity;0.0347123384962319!GO:0004468;lysine N-acetyltransferase activity;0.0347123384962319!GO:0004221;ubiquitin thiolesterase activity;0.0347123384962319!GO:0007050;cell cycle arrest;0.0347757647257512!GO:0051059;NF-kappaB binding;0.0348568398465532!GO:0006338;chromatin remodeling;0.0349531064289544!GO:0000726;non-recombinational repair;0.0349531064289544!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0355188520801705!GO:0000123;histone acetyltransferase complex;0.0356031171744657!GO:0030119;AP-type membrane coat adaptor complex;0.0357243412467998!GO:0031647;regulation of protein stability;0.0360915462115719!GO:0031461;cullin-RING ubiquitin ligase complex;0.0364241378449457!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.03775114157705!GO:0006516;glycoprotein catabolic process;0.0378235657351014!GO:0008250;oligosaccharyl transferase complex;0.0379156142159447!GO:0005784;translocon complex;0.0379156142159447!GO:0016791;phosphoric monoester hydrolase activity;0.0383820425951905!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0391973778085058!GO:0000428;DNA-directed RNA polymerase complex;0.0391973778085058!GO:0046822;regulation of nucleocytoplasmic transport;0.0392021977931709!GO:0048002;antigen processing and presentation of peptide antigen;0.0396375763897167!GO:0005092;GDP-dissociation inhibitor activity;0.0406504673682649!GO:0031982;vesicle;0.0407881117318252!GO:0051098;regulation of binding;0.0408461655308858!GO:0031123;RNA 3'-end processing;0.041565361581478!GO:0032039;integrator complex;0.0417520042113271!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0418614018317007!GO:0045039;protein import into mitochondrial inner membrane;0.0418614018317007!GO:0017134;fibroblast growth factor binding;0.0419154506474167!GO:0009161;ribonucleoside monophosphate metabolic process;0.0419154506474167!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0419154506474167!GO:0030041;actin filament polymerization;0.043313929499255!GO:0048487;beta-tubulin binding;0.0434386281532346!GO:0030867;rough endoplasmic reticulum membrane;0.0436550268145299!GO:0048518;positive regulation of biological process;0.043773351876941!GO:0004520;endodeoxyribonuclease activity;0.0440931499813151!GO:0007033;vacuole organization and biogenesis;0.0440975503545874!GO:0007004;telomere maintenance via telomerase;0.0444779690812121!GO:0030097;hemopoiesis;0.0444994907773115!GO:0045321;leukocyte activation;0.0445197677260223!GO:0030131;clathrin adaptor complex;0.0446935146053343!GO:0003682;chromatin binding;0.0446935146053343!GO:0019867;outer membrane;0.0450180553463708!GO:0043280;positive regulation of caspase activity;0.0453096071583908!GO:0046426;negative regulation of JAK-STAT cascade;0.0453096071583908!GO:0000097;sulfur amino acid biosynthetic process;0.0459718034600753!GO:0000096;sulfur amino acid metabolic process;0.0462579746188616!GO:0022406;membrane docking;0.0470616653925385!GO:0048278;vesicle docking;0.0470616653925385!GO:0006308;DNA catabolic process;0.0471711282090753!GO:0006914;autophagy;0.0472625772838496!GO:0022411;cellular component disassembly;0.0480127248730129!GO:0005788;endoplasmic reticulum lumen;0.0480754302503135!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0480754302503135!GO:0005758;mitochondrial intermembrane space;0.0487404610262984!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0491907119251296!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0493181635051439!GO:0005850;eukaryotic translation initiation factor 2 complex;0.049473176661291
 |sample_id=12189
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=POU2F1..3:3.60678794268;POU5F1:3.3218637589;FOXA2:2.16038668294;PDX1:1.91716215155;FOX{F1,F2,J1}:1.89564701563;PBX1:1.77733695999;ELF1,2,4:1.52458156901;DMAP1_NCOR{1,2}_SMARC:1.51101526278;TLX2:1.43834472474;PAX6:1.40873229161;FOX{I1,J2}:1.35894961448;IRF1,2:1.34117024798;FOXO1,3,4:1.32876459412;RFX2..5_RFXANK_RFXAP:1.30243066963;CRX:1.30051921592;SPI1:1.27608470035;HES1:1.12326632125;ETS1,2:1.10682008351;MYOD1:1.05313354701;RUNX1..3:1.02229293402;NFKB1_REL_RELA:1.01845055747;NKX2-2,8:1.01657524969;SPIB:0.98216716093;FOX{D1,D2}:0.967599836904;YY1:0.929608581739;ELK1,4_GABP{A,B1}:0.906765213243;LMO2:0.878126803183;HBP1_HMGB_SSRP1_UBTF:0.874844862123;OCT4_SOX2{dimer}:0.865855957442;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.860209950863;STAT1,3:0.814522538744;ZEB1:0.780220807759;ESR1:0.759373742577;IRF7:0.737470189379;ALX1:0.733766608215;GATA6:0.714420792137;BPTF:0.71149783428;NANOG{mouse}:0.702140647838;CDX1,2,4:0.698640804661;LEF1_TCF7_TCF7L1,2:0.697314389328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.689985114784;NFIX:0.588152232688;VSX1,2:0.563378159834;AIRE:0.53190049906;NFIL3:0.505211725978;RORA:0.479350396776;CREB1:0.472946811081;SNAI1..3:0.463441638095;NKX6-1,2:0.406480205706;TGIF1:0.369676246206;MEF2{A,B,C,D}:0.334449516133;NR5A1,2:0.322281149884;GLI1..3:0.311972592641;HAND1,2:0.30071190871;ADNP_IRX_SIX_ZHX:0.254530336879;ATF5_CREB3:0.242179266855;CUX2:0.239095421957;SOX5:0.237491199977;RXRA_VDR{dimer}:0.228747868771;BREu{core}:0.219325236595;HMX1:0.205620573914;MYB:0.204462155922;STAT5{A,B}:0.17520961866;FOXP3:0.169807248533;PRRX1,2:0.145947534853;FOXN1:0.13887693584;ZNF148:0.118708993237;ATF4:0.112838897747;GFI1:0.0789110352884;ATF2:0.0602909475077;AR:0.0497790711932;EP300:0.0414085556162;ONECUT1,2:0.0341380659812;NHLH1,2:0.0276549756856;SOX{8,9,10}:0.00591545320107;PAX2:0.00492307547246;PAX3,7:-0.000215128560451;FOXQ1:-0.0112187443465;CDC5L:-0.0161292374807;NANOG:-0.0555367141508;ATF6:-0.0828756844404;FOXP1:-0.119999097201;EVI1:-0.123548057124;HOX{A6,A7,B6,B7}:-0.150077438582;ALX4:-0.182987278429;SMAD1..7,9:-0.18538788288;SREBF1,2:-0.18764881063;HNF4A_NR2F1,2:-0.191350452287;TFAP4:-0.212259979704;NR6A1:-0.226066482671;ZNF143:-0.229380695454;NFATC1..3:-0.230467089409;T:-0.232375365088;TAL1_TCF{3,4,12}:-0.232475707189;AHR_ARNT_ARNT2:-0.23611529685;bHLH_family:-0.240910699504;NFY{A,B,C}:-0.291485587662;HOX{A4,D4}:-0.291576769182;E2F1..5:-0.292180650886;ZFP161:-0.300679211818;ZBTB16:-0.310104216861;PRDM1:-0.317230289433;HNF1A:-0.332079500781;CEBPA,B_DDIT3:-0.338266958342;POU1F1:-0.339612910385;TBX4,5:-0.363269330797;TFCP2:-0.382479993809;SPZ1:-0.4371961118;FOSL2:-0.437442528425;NRF1:-0.450340398172;ARID5B:-0.461588128335;ZNF238:-0.465873992024;EBF1:-0.484891385123;FOXL1:-0.518628998171;NKX2-1,4:-0.522514390441;FOS_FOS{B,L1}_JUN{B,D}:-0.533048500065;NKX2-3_NKX2-5:-0.537166290954;IKZF2:-0.542939518003;PAX4:-0.543272495746;RFX1:-0.546874902761;MYFfamily:-0.548400544237;HSF1,2:-0.59963430533;TOPORS:-0.604734791602;SOX17:-0.636612107152;BACH2:-0.639838734316;TP53:-0.646586936055;SRF:-0.668740980401;PAX8:-0.673932843945;REST:-0.685979918754;HIF1A:-0.692446373044;TEF:-0.716539522221;JUN:-0.720175971797;NKX3-2:-0.722567328466;XBP1:-0.728087007923;MYBL2:-0.738462591713;RXR{A,B,G}:-0.813100527352;NR1H4:-0.815920154601;ZNF384:-0.83585831506;MTF1:-0.844101214564;HOX{A5,B5}:-0.872095916672;NFE2:-0.874406622379;SOX2:-0.88617732225;HLF:-0.894652414959;DBP:-0.898151114473;RBPJ:-0.898780513254;MAFB:-0.903612714137;HOXA9_MEIS1:-0.928224436863;GCM1,2:-0.951247072539;POU6F1:-0.958015199739;EGR1..3:-0.977296848789;NFE2L2:-1.00247207148;STAT2,4,6:-1.07055996218;TBP:-1.11671671161;FOXM1:-1.12315875277;PATZ1:-1.14852132386;NR3C1:-1.1493230042;POU3F1..4:-1.16457650787;GATA4:-1.18875112817;MZF1:-1.19879539352;GZF1:-1.20538618915;MED-1{core}:-1.20812052858;EN1,2:-1.21364673394;PPARG:-1.23352783277;GFI1B:-1.26398118905;MAZ:-1.27757768662;UFEwm:-1.33150488521;MTE{core}:-1.33502244186;ZNF423:-1.34757588951;RREB1:-1.35456039694;ESRRA:-1.36696782749;NKX3-1:-1.38719509305;TEAD1:-1.41114736883;HMGA1,2:-1.44665665934;LHX3,4:-1.44817502763;HIC1:-1.46517601182;PITX1..3:-1.5028364847;GTF2I:-1.52460455167;KLF4:-1.53628570673;ZIC1..3:-1.59181678187;XCPE1{core}:-1.63955576791;ZBTB6:-1.6994959762;TFAP2B:-1.71186789502;TLX1..3_NFIC{dimer}:-1.7325262558;TFAP2{A,C}:-1.73298274685;TFDP1:-1.81029707668;SP1:-1.83836569562;FOXD3:-1.86294493895;PAX5:-1.86370101696;GTF2A1,2:-2.12722736404;NFE2L1:-2.20344996766;IKZF1:-2.33717859597;PAX1,9:-2.77328462782
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12189-129B2;search_select_hide=table117:FF:12189-129B2
 }}

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FF:12189-129B2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:33, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0