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{{f5samples
{{f5samples
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|name=CD8+ T Cells (pluriselect), donor090309, donation3
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|namespace=FANTOM5
Line 42: Line 61:
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Line 57: Line 79:
|rna_weight_ug=1.66158
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Line 69: Line 92:
|sample_ethnicity=
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|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.40940916150482e-216!GO:0043227;membrane-bound organelle;1.28727399242208e-189!GO:0043231;intracellular membrane-bound organelle;2.97631482696992e-189!GO:0043226;organelle;8.71104054738576e-174!GO:0043229;intracellular organelle;3.95443523610545e-173!GO:0005737;cytoplasm;1.6529481371121e-137!GO:0044422;organelle part;5.2181895267921e-115!GO:0044446;intracellular organelle part;2.75127123319717e-113!GO:0044444;cytoplasmic part;3.99045471160911e-102!GO:0032991;macromolecular complex;2.24943191539745e-98!GO:0030529;ribonucleoprotein complex;1.1700424928057e-93!GO:0044237;cellular metabolic process;6.67227687751665e-93!GO:0043170;macromolecule metabolic process;1.62523140018511e-91!GO:0005634;nucleus;2.62106064016027e-90!GO:0044238;primary metabolic process;3.57683323678345e-88!GO:0003723;RNA binding;6.84254054299999e-80!GO:0044428;nuclear part;1.43440847500668e-73!GO:0043233;organelle lumen;1.33488644138224e-66!GO:0031974;membrane-enclosed lumen;1.33488644138224e-66!GO:0005739;mitochondrion;1.47245605925364e-64!GO:0043283;biopolymer metabolic process;5.94216229211201e-59!GO:0006396;RNA processing;5.96143388255101e-59!GO:0010467;gene expression;3.13002440367257e-55!GO:0005840;ribosome;2.77918517167805e-53!GO:0006412;translation;6.85111798590457e-53!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.10526573166395e-49!GO:0016071;mRNA metabolic process;5.48371312943074e-48!GO:0019538;protein metabolic process;1.37857757948792e-46!GO:0043234;protein complex;1.59697063361397e-46!GO:0003735;structural constituent of ribosome;4.80213039426311e-46!GO:0044429;mitochondrial part;7.17060616317675e-46!GO:0005515;protein binding;5.5420814084003e-45!GO:0044267;cellular protein metabolic process;8.98303345804798e-45!GO:0031981;nuclear lumen;1.32877100954763e-44!GO:0033036;macromolecule localization;3.19167724776992e-44!GO:0044260;cellular macromolecule metabolic process;3.58878418470589e-44!GO:0015031;protein transport;3.35552804651333e-42!GO:0008380;RNA splicing;9.06299818763384e-42!GO:0006397;mRNA processing;1.64533292041658e-41!GO:0031090;organelle membrane;2.65245030783635e-41!GO:0009059;macromolecule biosynthetic process;4.31150615986351e-41!GO:0045184;establishment of protein localization;7.59440760767701e-41!GO:0008104;protein localization;1.12158674157039e-40!GO:0033279;ribosomal subunit;3.96459595627924e-40!GO:0031967;organelle envelope;1.83617209282864e-39!GO:0031975;envelope;3.89138467446528e-39!GO:0005829;cytosol;7.04542386741415e-36!GO:0003676;nucleic acid binding;2.42885039052401e-34!GO:0009058;biosynthetic process;3.62603251289253e-33!GO:0044249;cellular biosynthetic process;4.58875098209262e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.25243702659506e-32!GO:0005681;spliceosome;1.78807216264155e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.42615563320408e-29!GO:0046907;intracellular transport;3.75364333581457e-29!GO:0065003;macromolecular complex assembly;6.44410982265744e-29!GO:0006886;intracellular protein transport;7.55206721403439e-29!GO:0016070;RNA metabolic process;5.42440108385509e-28!GO:0005740;mitochondrial envelope;6.56156068335947e-28!GO:0005654;nucleoplasm;1.39411369563021e-27!GO:0006259;DNA metabolic process;1.5766226304988e-27!GO:0031966;mitochondrial membrane;1.83566259520191e-27!GO:0019866;organelle inner membrane;2.19786431917848e-27!GO:0044445;cytosolic part;1.60063859270353e-26!GO:0016043;cellular component organization and biogenesis;4.88001307042824e-26!GO:0022607;cellular component assembly;1.90284235812488e-25!GO:0005743;mitochondrial inner membrane;2.33219553870607e-25!GO:0006119;oxidative phosphorylation;1.2967957436689e-22!GO:0044455;mitochondrial membrane part;1.21653040739248e-21!GO:0006512;ubiquitin cycle;1.5072812606581e-21!GO:0044451;nucleoplasm part;2.40776281768954e-21!GO:0051641;cellular localization;8.22246565986358e-21!GO:0015935;small ribosomal subunit;1.15473324682151e-20!GO:0015934;large ribosomal subunit;1.66651337813112e-20!GO:0051649;establishment of cellular localization;1.78319909607481e-20!GO:0031980;mitochondrial lumen;1.90119783059056e-20!GO:0005759;mitochondrial matrix;1.90119783059056e-20!GO:0022618;protein-RNA complex assembly;3.36557406596125e-20!GO:0000166;nucleotide binding;9.12701155308204e-20!GO:0044265;cellular macromolecule catabolic process;1.81267753630197e-18!GO:0005730;nucleolus;1.81267753630197e-18!GO:0006996;organelle organization and biogenesis;2.38652447472163e-18!GO:0016874;ligase activity;2.47916284671624e-18!GO:0005746;mitochondrial respiratory chain;6.52845985104231e-18!GO:0012501;programmed cell death;9.70323200695893e-18!GO:0006915;apoptosis;1.18360517074064e-17!GO:0006605;protein targeting;4.88775412721259e-17!GO:0008219;cell death;5.82373528947792e-17!GO:0016265;death;5.82373528947792e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;6.0580750675007e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.20818840118722e-17!GO:0019941;modification-dependent protein catabolic process;7.73418824398433e-17!GO:0043632;modification-dependent macromolecule catabolic process;7.73418824398433e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;8.42120576855217e-17!GO:0016462;pyrophosphatase activity;1.03345995015515e-16!GO:0043285;biopolymer catabolic process;1.29669998976787e-16!GO:0044257;cellular protein catabolic process;1.36767067506725e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.52465934561916e-16!GO:0006457;protein folding;1.5302637607019e-16!GO:0016604;nuclear body;1.5916681612998e-16!GO:0017111;nucleoside-triphosphatase activity;1.5916681612998e-16!GO:0008135;translation factor activity, nucleic acid binding;3.65557599159208e-16!GO:0043228;non-membrane-bound organelle;4.02014676645871e-16!GO:0043232;intracellular non-membrane-bound organelle;4.02014676645871e-16!GO:0000502;proteasome complex (sensu Eukaryota);4.63609965592188e-16!GO:0043412;biopolymer modification;5.45489895419291e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.94585140453497e-15!GO:0003954;NADH dehydrogenase activity;1.94585140453497e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.94585140453497e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.1194310476209e-15!GO:0009057;macromolecule catabolic process;4.49432639997805e-15!GO:0005761;mitochondrial ribosome;4.6927454391325e-15!GO:0000313;organellar ribosome;4.6927454391325e-15!GO:0012505;endomembrane system;5.80284295095446e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;5.81043498733118e-15!GO:0000375;RNA splicing, via transesterification reactions;5.81043498733118e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.81043498733118e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.05012798839214e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.52685675433027e-15!GO:0042775;organelle ATP synthesis coupled electron transport;8.59922483553533e-14!GO:0042773;ATP synthesis coupled electron transport;8.59922483553533e-14!GO:0006464;protein modification process;9.25369829369631e-14!GO:0006913;nucleocytoplasmic transport;1.22035324166976e-13!GO:0016887;ATPase activity;1.49031995229415e-13!GO:0006974;response to DNA damage stimulus;1.86502773756985e-13!GO:0032553;ribonucleotide binding;1.88570771843567e-13!GO:0032555;purine ribonucleotide binding;1.88570771843567e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;2.0680439367439e-13!GO:0051169;nuclear transport;2.13159062455399e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.4013977238197e-13!GO:0045271;respiratory chain complex I;2.4013977238197e-13!GO:0005747;mitochondrial respiratory chain complex I;2.4013977238197e-13!GO:0042254;ribosome biogenesis and assembly;2.70546919487036e-13!GO:0016607;nuclear speck;3.83949097682365e-13!GO:0042623;ATPase activity, coupled;4.33206815993157e-13!GO:0017076;purine nucleotide binding;4.59313348068096e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.76545101253941e-13!GO:0006323;DNA packaging;8.1466550043979e-13!GO:0051186;cofactor metabolic process;1.21412482690225e-12!GO:0044248;cellular catabolic process;1.3735134699472e-12!GO:0030163;protein catabolic process;1.75118841514898e-12!GO:0006413;translational initiation;1.88601955270279e-12!GO:0003743;translation initiation factor activity;1.92844294637389e-12!GO:0051276;chromosome organization and biogenesis;2.10529444756107e-12!GO:0042981;regulation of apoptosis;2.16153500602242e-12!GO:0008134;transcription factor binding;2.16305892803127e-12!GO:0043067;regulation of programmed cell death;2.30908637868546e-12!GO:0005635;nuclear envelope;2.35766274613093e-12!GO:0006281;DNA repair;4.92495799767563e-12!GO:0005524;ATP binding;5.52139501025859e-12!GO:0043687;post-translational protein modification;6.47922101068386e-12!GO:0032559;adenyl ribonucleotide binding;1.23157369002211e-11!GO:0031965;nuclear membrane;1.70358377065631e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.96109488861613e-11!GO:0048770;pigment granule;3.11167148634727e-11!GO:0042470;melanosome;3.11167148634727e-11!GO:0051082;unfolded protein binding;3.44366438175416e-11!GO:0030554;adenyl nucleotide binding;4.34644497242278e-11!GO:0006446;regulation of translational initiation;7.90440495020379e-11!GO:0017038;protein import;8.56698608588487e-11!GO:0008639;small protein conjugating enzyme activity;1.02746879213313e-10!GO:0048193;Golgi vesicle transport;2.19590428613585e-10!GO:0004842;ubiquitin-protein ligase activity;2.19590428613585e-10!GO:0006333;chromatin assembly or disassembly;3.12210716733879e-10!GO:0006732;coenzyme metabolic process;4.22340059925588e-10!GO:0016072;rRNA metabolic process;5.30808386017578e-10!GO:0019829;cation-transporting ATPase activity;5.48808621339038e-10!GO:0019787;small conjugating protein ligase activity;5.60449712007957e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.36652239615139e-10!GO:0065004;protein-DNA complex assembly;6.74674633315564e-10!GO:0044453;nuclear membrane part;6.74674633315564e-10!GO:0006364;rRNA processing;7.62257788728532e-10!GO:0006399;tRNA metabolic process;8.85312445522304e-10!GO:0004386;helicase activity;9.74106642953935e-10!GO:0009259;ribonucleotide metabolic process;1.58888535813554e-09!GO:0009260;ribonucleotide biosynthetic process;2.58765442345859e-09!GO:0007049;cell cycle;3.00999631239007e-09!GO:0005694;chromosome;3.10980727586788e-09!GO:0006164;purine nucleotide biosynthetic process;3.34903013617558e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.86517827898849e-09!GO:0050657;nucleic acid transport;4.55951264002541e-09!GO:0051236;establishment of RNA localization;4.55951264002541e-09!GO:0050658;RNA transport;4.55951264002541e-09!GO:0006163;purine nucleotide metabolic process;5.22014007752611e-09!GO:0009152;purine ribonucleotide biosynthetic process;5.22014007752611e-09!GO:0050794;regulation of cellular process;5.42670348120994e-09!GO:0005794;Golgi apparatus;6.32609323784045e-09!GO:0005839;proteasome core complex (sensu Eukaryota);6.55360423158802e-09!GO:0006403;RNA localization;6.60478021515904e-09!GO:0015078;hydrogen ion transmembrane transporter activity;7.39395980120369e-09!GO:0009150;purine ribonucleotide metabolic process;8.91584141312714e-09!GO:0043566;structure-specific DNA binding;8.93204797687247e-09!GO:0008026;ATP-dependent helicase activity;9.88973649255803e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.1256520402835e-08!GO:0016568;chromatin modification;1.23750141356044e-08!GO:0009060;aerobic respiration;1.40458474027732e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.40458474027732e-08!GO:0005643;nuclear pore;1.67202741505646e-08!GO:0044432;endoplasmic reticulum part;1.76879717872776e-08!GO:0044427;chromosomal part;1.88579850927905e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.25287286347105e-08!GO:0004298;threonine endopeptidase activity;2.82173153570407e-08!GO:0005783;endoplasmic reticulum;2.9181137453626e-08!GO:0009055;electron carrier activity;2.98221117443185e-08!GO:0015986;ATP synthesis coupled proton transport;3.00462413533097e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.00462413533097e-08!GO:0016881;acid-amino acid ligase activity;3.45736280005381e-08!GO:0008565;protein transporter activity;4.75930953524594e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.22625975546291e-08!GO:0009719;response to endogenous stimulus;6.05844211897057e-08!GO:0003697;single-stranded DNA binding;6.58704835562541e-08!GO:0065002;intracellular protein transport across a membrane;6.83540227902579e-08!GO:0016787;hydrolase activity;7.18947981129775e-08!GO:0045333;cellular respiration;7.71000924447938e-08!GO:0000785;chromatin;8.13575670762363e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.11500869201588e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.11500869201588e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.49471601129439e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.2919229031369e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.2919229031369e-07!GO:0016192;vesicle-mediated transport;1.34505700761866e-07!GO:0051726;regulation of cell cycle;1.35302605551614e-07!GO:0051028;mRNA transport;1.66935178368577e-07!GO:0000074;regulation of progression through cell cycle;1.6879844604467e-07!GO:0005789;endoplasmic reticulum membrane;1.73152047010081e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.76195680922009e-07!GO:0003712;transcription cofactor activity;1.85127467621283e-07!GO:0009141;nucleoside triphosphate metabolic process;1.85127467621283e-07!GO:0005768;endosome;1.85127467621283e-07!GO:0046930;pore complex;1.87811387501825e-07!GO:0006754;ATP biosynthetic process;1.89726726148923e-07!GO:0006753;nucleoside phosphate metabolic process;1.89726726148923e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.93826821751522e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.20807660609593e-07!GO:0015399;primary active transmembrane transporter activity;2.20807660609593e-07!GO:0051188;cofactor biosynthetic process;2.23866072248921e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.43058965996386e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.43058965996386e-07!GO:0022402;cell cycle process;2.58912906852879e-07!GO:0000245;spliceosome assembly;3.08254699979763e-07!GO:0019222;regulation of metabolic process;4.10612023014555e-07!GO:0006334;nucleosome assembly;4.24303973208274e-07!GO:0051170;nuclear import;5.36069165989774e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.44707188318736e-07!GO:0016469;proton-transporting two-sector ATPase complex;5.44707188318736e-07!GO:0046034;ATP metabolic process;5.76151717544832e-07!GO:0031497;chromatin assembly;6.08030805493998e-07!GO:0016779;nucleotidyltransferase activity;6.60002764023872e-07!GO:0006793;phosphorus metabolic process;6.94621501392039e-07!GO:0006796;phosphate metabolic process;6.94621501392039e-07!GO:0006606;protein import into nucleus;8.32768511159475e-07!GO:0000151;ubiquitin ligase complex;1.11264600804595e-06!GO:0009056;catabolic process;1.16446146481897e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.22154583885188e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.28189965125436e-06!GO:0032446;protein modification by small protein conjugation;1.32226836877723e-06!GO:0045259;proton-transporting ATP synthase complex;1.42008448711101e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.72134584408876e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.72134584408876e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.72134584408876e-06!GO:0006916;anti-apoptosis;1.88956304189103e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.94581376844302e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.07937056005164e-06!GO:0009615;response to virus;2.33273848671631e-06!GO:0006099;tricarboxylic acid cycle;2.42129286251781e-06!GO:0046356;acetyl-CoA catabolic process;2.42129286251781e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.5059015983521e-06!GO:0006084;acetyl-CoA metabolic process;2.9858724917298e-06!GO:0006917;induction of apoptosis;3.11128967340126e-06!GO:0009108;coenzyme biosynthetic process;3.34279546400907e-06!GO:0007005;mitochondrion organization and biogenesis;3.46640971542049e-06!GO:0016567;protein ubiquitination;3.62407311643002e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.72194005546714e-06!GO:0043492;ATPase activity, coupled to movement of substances;3.77388246855853e-06!GO:0043038;amino acid activation;3.88399975287775e-06!GO:0006418;tRNA aminoacylation for protein translation;3.88399975287775e-06!GO:0043039;tRNA aminoacylation;3.88399975287775e-06!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;4.277671106792e-06!GO:0012502;induction of programmed cell death;4.60513830581096e-06!GO:0043069;negative regulation of programmed cell death;4.61365938864592e-06!GO:0016310;phosphorylation;5.3040575928525e-06!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;5.6222899700094e-06!GO:0006260;DNA replication;6.02402382049478e-06!GO:0007243;protein kinase cascade;6.15927158638374e-06!GO:0003713;transcription coactivator activity;7.16761337300708e-06!GO:0043065;positive regulation of apoptosis;7.99808282073411e-06!GO:0006613;cotranslational protein targeting to membrane;8.02596668955583e-06!GO:0043066;negative regulation of apoptosis;8.21589375455272e-06!GO:0031323;regulation of cellular metabolic process;8.32719773239937e-06!GO:0051246;regulation of protein metabolic process;8.32719773239937e-06!GO:0051168;nuclear export;8.32719773239937e-06!GO:0003724;RNA helicase activity;8.32719773239937e-06!GO:0008632;apoptotic program;8.32719773239937e-06!GO:0005793;ER-Golgi intermediate compartment;1.03394395741985e-05!GO:0043068;positive regulation of programmed cell death;1.0786902704037e-05!GO:0016740;transferase activity;1.09039535812465e-05!GO:0005762;mitochondrial large ribosomal subunit;1.14200746155067e-05!GO:0000315;organellar large ribosomal subunit;1.14200746155067e-05!GO:0006461;protein complex assembly;1.28645453854613e-05!GO:0008270;zinc ion binding;1.33205742668251e-05!GO:0045786;negative regulation of progression through cell cycle;1.39481408853092e-05!GO:0006350;transcription;1.45587577678911e-05!GO:0009109;coenzyme catabolic process;1.64624553751128e-05!GO:0005770;late endosome;1.67180648788241e-05!GO:0006401;RNA catabolic process;1.86960137583549e-05!GO:0001772;immunological synapse;2.12572385732399e-05!GO:0051187;cofactor catabolic process;2.13256749125606e-05!GO:0030120;vesicle coat;2.18049024761523e-05!GO:0030662;coated vesicle membrane;2.18049024761523e-05!GO:0065009;regulation of a molecular function;2.2242642390508e-05!GO:0050789;regulation of biological process;2.35117421899523e-05!GO:0009117;nucleotide metabolic process;2.63939391059831e-05!GO:0006752;group transfer coenzyme metabolic process;3.00038533657757e-05!GO:0006612;protein targeting to membrane;3.81993476359277e-05!GO:0048523;negative regulation of cellular process;4.36401571335369e-05!GO:0016563;transcription activator activity;4.68940977257517e-05!GO:0048475;coated membrane;4.97767970219913e-05!GO:0030117;membrane coat;4.97767970219913e-05!GO:0006366;transcription from RNA polymerase II promoter;5.69992644952937e-05!GO:0003899;DNA-directed RNA polymerase activity;6.36335004547318e-05!GO:0006402;mRNA catabolic process;6.99991892972412e-05!GO:0043623;cellular protein complex assembly;7.53376549659349e-05!GO:0000314;organellar small ribosomal subunit;8.74059123120185e-05!GO:0005763;mitochondrial small ribosomal subunit;8.74059123120185e-05!GO:0044431;Golgi apparatus part;0.000101368401853631!GO:0005773;vacuole;0.000102982847538172!GO:0010468;regulation of gene expression;0.00013397893444314!GO:0003729;mRNA binding;0.000138486309797191!GO:0008033;tRNA processing;0.000148708719045122!GO:0016363;nuclear matrix;0.000173334990065699!GO:0043681;protein import into mitochondrion;0.000177861772123698!GO:0019899;enzyme binding;0.00018210600903831!GO:0042101;T cell receptor complex;0.00019121672555728!GO:0015992;proton transport;0.000203061095127273!GO:0006818;hydrogen transport;0.000205566154336309!GO:0046914;transition metal ion binding;0.000217899382018027!GO:0005885;Arp2/3 protein complex;0.000217899382018027!GO:0003690;double-stranded DNA binding;0.000226210088034798!GO:0005813;centrosome;0.000229013727419785!GO:0008186;RNA-dependent ATPase activity;0.000235232690514299!GO:0004518;nuclease activity;0.000238630931720497!GO:0000786;nucleosome;0.000272073223597187!GO:0043021;ribonucleoprotein binding;0.000272298297812148!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000307208918409499!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00031684328472897!GO:0008234;cysteine-type peptidase activity;0.000318776843489533!GO:0000323;lytic vacuole;0.000354711380409648!GO:0005764;lysosome;0.000354711380409648!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000396575919428814!GO:0031324;negative regulation of cellular metabolic process;0.00041652887837743!GO:0044440;endosomal part;0.00042011112769476!GO:0010008;endosome membrane;0.00042011112769476!GO:0031072;heat shock protein binding;0.000493230098401289!GO:0016564;transcription repressor activity;0.000499368421991306!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000526032900274845!GO:0044452;nucleolar part;0.000534629576609954!GO:0030384;phosphoinositide metabolic process;0.000565471623296858!GO:0005815;microtubule organizing center;0.000565471623296858!GO:0048519;negative regulation of biological process;0.000576307053291977!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00060040625735071!GO:0022890;inorganic cation transmembrane transporter activity;0.00062138564430544!GO:0006417;regulation of translation;0.000621970893115296!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000624232782599096!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000695499776801941!GO:0015002;heme-copper terminal oxidase activity;0.000695499776801941!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000695499776801941!GO:0004129;cytochrome-c oxidase activity;0.000695499776801941!GO:0004004;ATP-dependent RNA helicase activity;0.000704306857900979!GO:0007006;mitochondrial membrane organization and biogenesis;0.000762436872348197!GO:0006310;DNA recombination;0.000780560993899585!GO:0009165;nucleotide biosynthetic process;0.000795972892313499!GO:0046489;phosphoinositide biosynthetic process;0.000808522368427369!GO:0008654;phospholipid biosynthetic process;0.000824362183795036!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000824362183795036!GO:0032774;RNA biosynthetic process;0.000860582810208898!GO:0004527;exonuclease activity;0.000881421762310866!GO:0006261;DNA-dependent DNA replication;0.00089099209954676!GO:0016197;endosome transport;0.00100685138866208!GO:0006891;intra-Golgi vesicle-mediated transport;0.00103113556617193!GO:0006351;transcription, DNA-dependent;0.00104642990933256!GO:0051427;hormone receptor binding;0.00104642990933256!GO:0006352;transcription initiation;0.00104642990933256!GO:0005798;Golgi-associated vesicle;0.00104915057874271!GO:0019867;outer membrane;0.00116815416506956!GO:0006414;translational elongation;0.00127023738105318!GO:0005684;U2-dependent spliceosome;0.00127759114033448!GO:0031326;regulation of cellular biosynthetic process;0.00130453907265262!GO:0005741;mitochondrial outer membrane;0.00130453907265262!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00134720712697946!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00134720712697946!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00135802556135225!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00135802556135225!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00135802556135225!GO:0000278;mitotic cell cycle;0.00141551032160532!GO:0031968;organelle outer membrane;0.0014195924244324!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00143022432537541!GO:0008168;methyltransferase activity;0.00143828166012407!GO:0006383;transcription from RNA polymerase III promoter;0.00146648474174023!GO:0007034;vacuolar transport;0.00148378990168789!GO:0009967;positive regulation of signal transduction;0.00149724243614066!GO:0016859;cis-trans isomerase activity;0.00150981929486268!GO:0006611;protein export from nucleus;0.00158323891202796!GO:0016741;transferase activity, transferring one-carbon groups;0.00172414244225491!GO:0000139;Golgi membrane;0.00183162798818046!GO:0035257;nuclear hormone receptor binding;0.00202074271009453!GO:0016251;general RNA polymerase II transcription factor activity;0.00206195967821335!GO:0005774;vacuolar membrane;0.00230945132134099!GO:0005525;GTP binding;0.00239549083335201!GO:0045449;regulation of transcription;0.00239739104246158!GO:0048500;signal recognition particle;0.00243554828145366!GO:0046474;glycerophospholipid biosynthetic process;0.00265809894634243!GO:0042110;T cell activation;0.00275154162455713!GO:0016481;negative regulation of transcription;0.00284243619165639!GO:0008312;7S RNA binding;0.00293226436601753!GO:0009892;negative regulation of metabolic process;0.00293226436601753!GO:0015980;energy derivation by oxidation of organic compounds;0.00296847409038761!GO:0051252;regulation of RNA metabolic process;0.00302914603297171!GO:0022415;viral reproductive process;0.00302979387565744!GO:0043488;regulation of mRNA stability;0.00307751862434287!GO:0043487;regulation of RNA stability;0.00307751862434287!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00308722537981172!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00308722537981172!GO:0003924;GTPase activity;0.00308840895197987!GO:0006650;glycerophospholipid metabolic process;0.00309132381115991!GO:0006839;mitochondrial transport;0.00314103223749057!GO:0042802;identical protein binding;0.00345775154626055!GO:0031902;late endosome membrane;0.00363132182531359!GO:0005667;transcription factor complex;0.0039233276759647!GO:0015631;tubulin binding;0.00393171334891535!GO:0004532;exoribonuclease activity;0.00397998001774933!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00397998001774933!GO:0009889;regulation of biosynthetic process;0.0040571820293596!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00407373208110551!GO:0045047;protein targeting to ER;0.00407373208110551!GO:0006405;RNA export from nucleus;0.00409866079443564!GO:0048471;perinuclear region of cytoplasm;0.00409992831173458!GO:0016853;isomerase activity;0.00424478507271032!GO:0006289;nucleotide-excision repair;0.00424884660384093!GO:0051789;response to protein stimulus;0.00425313228452287!GO:0006986;response to unfolded protein;0.00425313228452287!GO:0006091;generation of precursor metabolites and energy;0.0043509122396467!GO:0006626;protein targeting to mitochondrion;0.00452947152985944!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00456680556124702!GO:0007242;intracellular signaling cascade;0.00456762188479581!GO:0044437;vacuolar part;0.00456762188479581!GO:0050790;regulation of catalytic activity;0.00469250697438278!GO:0008408;3'-5' exonuclease activity;0.00475363127265426!GO:0060090;molecular adaptor activity;0.00510226142277839!GO:0016584;nucleosome positioning;0.00512271108585274!GO:0051098;regulation of binding;0.00523204790096357!GO:0003725;double-stranded RNA binding;0.00548968761168271!GO:0005765;lysosomal membrane;0.00552185191753594!GO:0051087;chaperone binding;0.00561987192653039!GO:0065007;biological regulation;0.00587601115125022!GO:0005769;early endosome;0.0059135394858671!GO:0005637;nuclear inner membrane;0.00638731731292916!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00639884837576866!GO:0006302;double-strand break repair;0.00642555382148902!GO:0006497;protein amino acid lipidation;0.00651047196560567!GO:0032259;methylation;0.00657127202942243!GO:0051920;peroxiredoxin activity;0.00687554242472987!GO:0051539;4 iron, 4 sulfur cluster binding;0.00701580633496238!GO:0048487;beta-tubulin binding;0.00705990750467233!GO:0000209;protein polyubiquitination;0.0074594461238157!GO:0006506;GPI anchor biosynthetic process;0.00754985340075237!GO:0045454;cell redox homeostasis;0.00761976325852104!GO:0051540;metal cluster binding;0.00773182159110919!GO:0051536;iron-sulfur cluster binding;0.00773182159110919!GO:0046649;lymphocyte activation;0.00804767221043815!GO:0003677;DNA binding;0.00842559544356066!GO:0048522;positive regulation of cellular process;0.00842763104742045!GO:0051301;cell division;0.00872569496146687!GO:0003684;damaged DNA binding;0.00878354248546994!GO:0003746;translation elongation factor activity;0.00888987001019595!GO:0033116;ER-Golgi intermediate compartment membrane;0.0092321911945701!GO:0016272;prefoldin complex;0.00949943850689539!GO:0000049;tRNA binding;0.00956718694057604!GO:0019843;rRNA binding;0.0100701988592277!GO:0006607;NLS-bearing substrate import into nucleus;0.0101268286888628!GO:0042287;MHC protein binding;0.0102089092678126!GO:0004197;cysteine-type endopeptidase activity;0.010465283789016!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.010470739411704!GO:0030658;transport vesicle membrane;0.0111028124434815!GO:0008624;induction of apoptosis by extracellular signals;0.0113041708319096!GO:0006505;GPI anchor metabolic process;0.0113041708319096!GO:0004674;protein serine/threonine kinase activity;0.011385116742258!GO:0022411;cellular component disassembly;0.0116536804426102!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0121402747716481!GO:0003678;DNA helicase activity;0.0125935490498111!GO:0031625;ubiquitin protein ligase binding;0.0130129940009833!GO:0051092;activation of NF-kappaB transcription factor;0.0130959928569853!GO:0046966;thyroid hormone receptor binding;0.0131692825508713!GO:0006355;regulation of transcription, DNA-dependent;0.0137313495048113!GO:0032561;guanyl ribonucleotide binding;0.0137582601320892!GO:0019001;guanyl nucleotide binding;0.0137582601320892!GO:0007041;lysosomal transport;0.0137961806761937!GO:0043414;biopolymer methylation;0.0138104821535743!GO:0030118;clathrin coat;0.0140983122142449!GO:0008180;signalosome;0.0141569413490407!GO:0005869;dynactin complex;0.0142332072571318!GO:0046822;regulation of nucleocytoplasmic transport;0.0144811211691519!GO:0000178;exosome (RNase complex);0.0145935070559775!GO:0051251;positive regulation of lymphocyte activation;0.0146501946894333!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0146870858185689!GO:0032940;secretion by cell;0.0148215166710713!GO:0051287;NAD binding;0.014984072922606!GO:0009112;nucleobase metabolic process;0.0150730573447687!GO:0006376;mRNA splice site selection;0.0151192872901953!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0151192872901953!GO:0030137;COPI-coated vesicle;0.0151855545792744!GO:0003711;transcription elongation regulator activity;0.0155086284704386!GO:0009116;nucleoside metabolic process;0.0156016331567548!GO:0005669;transcription factor TFIID complex;0.0162810203122332!GO:0006914;autophagy;0.0164389546900819!GO:0030663;COPI coated vesicle membrane;0.0164389546900819!GO:0030126;COPI vesicle coat;0.0164389546900819!GO:0008017;microtubule binding;0.0169465635258103!GO:0000087;M phase of mitotic cell cycle;0.0171223647075029!GO:0030880;RNA polymerase complex;0.017219982013329!GO:0042158;lipoprotein biosynthetic process;0.0172353063690781!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0173484553243608!GO:0031124;mRNA 3'-end processing;0.0175692031347227!GO:0045045;secretory pathway;0.0175774521653693!GO:0050811;GABA receptor binding;0.0177327114536357!GO:0008097;5S rRNA binding;0.0181662114248969!GO:0051090;regulation of transcription factor activity;0.0188581305117564!GO:0048002;antigen processing and presentation of peptide antigen;0.0192776847993861!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0193771417209822!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0195373813173601!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0202822215095352!GO:0010257;NADH dehydrogenase complex assembly;0.0202822215095352!GO:0033108;mitochondrial respiratory chain complex assembly;0.0202822215095352!GO:0043022;ribosome binding;0.0204001741235776!GO:0016605;PML body;0.0204131007623526!GO:0050852;T cell receptor signaling pathway;0.0205173508029141!GO:0022403;cell cycle phase;0.0208698559897777!GO:0005657;replication fork;0.0209232414828611!GO:0031123;RNA 3'-end processing;0.0209701223996386!GO:0030660;Golgi-associated vesicle membrane;0.0216576441749927!GO:0005048;signal sequence binding;0.0218306729908336!GO:0001784;phosphotyrosine binding;0.0220069423941135!GO:0000118;histone deacetylase complex;0.0221039502170194!GO:0031982;vesicle;0.0226681472849792!GO:0000738;DNA catabolic process, exonucleolytic;0.0226783192276102!GO:0047485;protein N-terminus binding;0.0227260146482066!GO:0044438;microbody part;0.0228391962434224!GO:0044439;peroxisomal part;0.0228391962434224!GO:0006284;base-excision repair;0.0234720338558081!GO:0000175;3'-5'-exoribonuclease activity;0.0234720338558081!GO:0007050;cell cycle arrest;0.0241854506961651!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0242796637842857!GO:0004576;oligosaccharyl transferase activity;0.024904349846338!GO:0007265;Ras protein signal transduction;0.0252436773412545!GO:0007067;mitosis;0.0255105846125933!GO:0043284;biopolymer biosynthetic process;0.0256212258210479!GO:0019079;viral genome replication;0.0257318571283103!GO:0006595;polyamine metabolic process;0.0261690731879466!GO:0006338;chromatin remodeling;0.0261881496537047!GO:0031988;membrane-bound vesicle;0.0265061679190295!GO:0005777;peroxisome;0.0270520105540113!GO:0042579;microbody;0.0270520105540113!GO:0003714;transcription corepressor activity;0.0273616907149273!GO:0008047;enzyme activator activity;0.0282164562475053!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0285017846702825!GO:0030132;clathrin coat of coated pit;0.0297668192423222!GO:0046979;TAP2 binding;0.0306180433658301!GO:0046977;TAP binding;0.0306180433658301!GO:0046978;TAP1 binding;0.0306180433658301!GO:0003988;acetyl-CoA C-acyltransferase activity;0.030659593789643!GO:0019058;viral infectious cycle;0.0309564447847991!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0310952993237381!GO:0009451;RNA modification;0.0311010863150779!GO:0016763;transferase activity, transferring pentosyl groups;0.031225515606328!GO:0005832;chaperonin-containing T-complex;0.0314227695467969!GO:0030125;clathrin vesicle coat;0.031783858183762!GO:0030665;clathrin coated vesicle membrane;0.031783858183762!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0320594598212579!GO:0045321;leukocyte activation;0.032365633049887!GO:0031903;microbody membrane;0.0325940659874163!GO:0005778;peroxisomal membrane;0.0325940659874163!GO:0046467;membrane lipid biosynthetic process;0.032650582102556!GO:0045309;protein phosphorylated amino acid binding;0.0327231119960757!GO:0043281;regulation of caspase activity;0.032771364801079!GO:0022406;membrane docking;0.032771364801079!GO:0048278;vesicle docking;0.032771364801079!GO:0019783;small conjugating protein-specific protease activity;0.0330368921999978!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0338269266229338!GO:0000428;DNA-directed RNA polymerase complex;0.0338269266229338!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0340418633166818!GO:0015923;mannosidase activity;0.0340418633166818!GO:0030867;rough endoplasmic reticulum membrane;0.0343768712714956!GO:0031252;leading edge;0.0344559776562286!GO:0008250;oligosaccharyl transferase complex;0.0345320885101819!GO:0051336;regulation of hydrolase activity;0.035431975917521!GO:0000776;kinetochore;0.0358126643068054!GO:0000339;RNA cap binding;0.0358128112995826!GO:0042608;T cell receptor binding;0.0359835135105047!GO:0051881;regulation of mitochondrial membrane potential;0.0359928789842886!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0363147053608671!GO:0045892;negative regulation of transcription, DNA-dependent;0.0368661175087109!GO:0000090;mitotic anaphase;0.0371355923207051!GO:0051322;anaphase;0.0371355923207051!GO:0004540;ribonuclease activity;0.0373260312077928!GO:0005070;SH3/SH2 adaptor activity;0.0374282428166056!GO:0004843;ubiquitin-specific protease activity;0.0379210281899466!GO:0008139;nuclear localization sequence binding;0.0379401986785225!GO:0006919;caspase activation;0.0379401986785225!GO:0006904;vesicle docking during exocytosis;0.0383257909053098!GO:0003682;chromatin binding;0.0384438774369063!GO:0006308;DNA catabolic process;0.0388741634858921!GO:0051219;phosphoprotein binding;0.0399550159037946!GO:0008287;protein serine/threonine phosphatase complex;0.0402255108510303!GO:0017134;fibroblast growth factor binding;0.0405578093137361!GO:0016491;oxidoreductase activity;0.0405965204605029!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0406283377423595!GO:0000287;magnesium ion binding;0.042043018035979!GO:0032200;telomere organization and biogenesis;0.0420690873025118!GO:0000723;telomere maintenance;0.0420690873025118!GO:0000059;protein import into nucleus, docking;0.0420690873025118!GO:0000726;non-recombinational repair;0.0420690873025118!GO:0015630;microtubule cytoskeleton;0.0422381058480751!GO:0048468;cell development;0.0423238868840857!GO:0005784;translocon complex;0.0423238868840857!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0438853609484668!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0438853609484668!GO:0040029;regulation of gene expression, epigenetic;0.044283029608634!GO:0008637;apoptotic mitochondrial changes;0.0444848434181388!GO:0008320;protein transmembrane transporter activity;0.0446669597638887!GO:0030911;TPR domain binding;0.0446669597638887!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0453109801388421!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.045556628767131!GO:0042393;histone binding;0.0458357299863777!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0466039414025614!GO:0016788;hydrolase activity, acting on ester bonds;0.0467601273615118!GO:0051223;regulation of protein transport;0.0469003234888541!GO:0042288;MHC class I protein binding;0.0476783171111554!GO:0016023;cytoplasmic membrane-bound vesicle;0.0481814114444345!GO:0030518;steroid hormone receptor signaling pathway;0.0482456752693375!GO:0006144;purine base metabolic process;0.0482456752693375!GO:0031410;cytoplasmic vesicle;0.048687687563177!GO:0016790;thiolester hydrolase activity;0.0487002052218901!GO:0043596;nuclear replication fork;0.0488004601176918!GO:0019883;antigen processing and presentation of endogenous antigen;0.0489018547912634!GO:0009303;rRNA transcription;0.0489018547912634!GO:0005521;lamin binding;0.0489674121572796
|sample_id=12196
|sample_id=12196
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=PDX1:2.56327722985;T:2.56176922514;CDX1,2,4:2.3142705961;RUNX1..3:2.12226400744;ELF1,2,4:2.07025146032;FOX{F1,F2,J1}:1.74956536812;ETS1,2:1.7395186696;RORA:1.46287866117;FOX{D1,D2}:1.45984356594;LEF1_TCF7_TCF7L1,2:1.43110580424;FOXO1,3,4:1.40821097548;PBX1:1.38167255641;ELK1,4_GABP{A,B1}:1.37287328791;PAX3,7:1.32407479365;STAT1,3:1.29034306249;IRF1,2:1.19165958371;DMAP1_NCOR{1,2}_SMARC:1.18509037193;CRX:1.14025301035;SPI1:1.12860393748;TLX2:1.1253042076;GATA6:1.08784874121;IKZF2:1.03619450069;FOX{I1,J2}:1.00235786107;PAX6:0.983124582261;YY1:0.963659330019;FOXA2:0.941758772045;VSX1,2:0.878199623607;SPIB:0.849135171824;BREu{core}:0.794719498688;BPTF:0.763464706305;NFIX:0.762047513979;CUX2:0.703438085002;NKX2-1,4:0.642806707612;HAND1,2:0.60316195354;NKX6-1,2:0.599255272411;IRF7:0.590636198336;NR1H4:0.569942803301;STAT5{A,B}:0.547254011582;FOXP3:0.505741229109;TGIF1:0.503146448049;ZBTB16:0.480098925449;ATF5_CREB3:0.448850047676;ALX1:0.439244009579;AR:0.428061224776;MYOD1:0.4244159428;HOX{A6,A7,B6,B7}:0.414724084236;SOX5:0.414653552887;NANOG{mouse}:0.413932245363;SNAI1..3:0.406325407405;HES1:0.403568644514;CREB1:0.388295001442;ZEB1:0.388142730372;POU2F1..3:0.36997524666;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.334043441024;RFX2..5_RFXANK_RFXAP:0.284748496326;RBPJ:0.255908237793;PRRX1,2:0.231004084276;FOXN1:0.229157569382;TAL1_TCF{3,4,12}:0.207580950435;NFKB1_REL_RELA:0.184317042673;NKX2-2,8:0.172909444539;NR5A1,2:0.167692409659;NFIL3:0.164572638205;NRF1:0.162351478049;FOXQ1:0.15848824306;SPZ1:0.156349836586;FOXP1:0.129973213698;LMO2:0.106412140102;ADNP_IRX_SIX_ZHX:0.105140824247;MYB:0.0916175784134;HMX1:0.0892676053564;SOX2:0.0857119777551;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0850101050198;TBX4,5:0.0848385423777;ATF2:0.05536923817;OCT4_SOX2{dimer}:0.0330557499616;ZNF148:0.0288004042424;NFATC1..3:0.024348066004;SREBF1,2:-0.00264329907865;NANOG:-0.003453884929;PAX4:-0.00692671284777;PAX2:-0.0293592993889;ZNF143:-0.0961271285361;NR3C1:-0.128140918701;RXRA_VDR{dimer}:-0.137840553615;FOXD3:-0.148965360871;POU1F1:-0.149237374586;ARID5B:-0.156804491642;AHR_ARNT_ARNT2:-0.176311278223;JUN:-0.182454211621;STAT2,4,6:-0.195908104679;HNF4A_NR2F1,2:-0.208852769012;ATF6:-0.225253698432;HNF1A:-0.232291626976;HBP1_HMGB_SSRP1_UBTF:-0.267017584198;EP300:-0.30051699086;ZNF384:-0.332668552921;ATF4:-0.33877668957;CEBPA,B_DDIT3:-0.338990325478;E2F1..5:-0.353021493469;GFI1:-0.354087154661;HOX{A4,D4}:-0.370578529067;FOSL2:-0.387739521478;NFY{A,B,C}:-0.387867501907;HMGA1,2:-0.401703666272;FOXM1:-0.418767142991;GCM1,2:-0.422173346982;ESR1:-0.430723707428;MYFfamily:-0.464187201027;MTF1:-0.477918665105;NHLH1,2:-0.490841476862;NFE2L2:-0.492439922625;EVI1:-0.497830168043;BACH2:-0.499614588563;NKX2-3_NKX2-5:-0.500586130666;NKX3-1:-0.509287984989;RFX1:-0.511130118935;FOS_FOS{B,L1}_JUN{B,D}:-0.543327709548;TFAP4:-0.543475635681;ONECUT1,2:-0.567185708342;DBP:-0.591439915148;NFE2:-0.592631049643;AIRE:-0.611753951678;PAX5:-0.615772626279;ZNF423:-0.637385044798;MEF2{A,B,C,D}:-0.6390111773;HOXA9_MEIS1:-0.65160800806;SMAD1..7,9:-0.655208449944;ZNF238:-0.668176507285;CDC5L:-0.683534983786;HLF:-0.687151912841;REST:-0.699873420876;RREB1:-0.709591202567;GLI1..3:-0.744448533286;TP53:-0.753788160246;TFCP2:-0.757182329056;NFE2L1:-0.760978041958;MAFB:-0.770013327213;MYBL2:-0.771496385784;ALX4:-0.782776284731;EGR1..3:-0.810170431141;SRF:-0.817233632601;NR6A1:-0.888877016709;SOX{8,9,10}:-0.893480982991;POU5F1:-0.894921039289;PITX1..3:-0.912349206416;HOX{A5,B5}:-0.965617769708;MED-1{core}:-0.965834546803;GFI1B:-0.988948867979;ZBTB6:-0.995082397376;LHX3,4:-1.01369645756;SOX17:-1.02189425455;ZFP161:-1.03269023969;PAX8:-1.07423128083;MZF1:-1.08831081488;GATA4:-1.1104846843;HIF1A:-1.1171247415;KLF4:-1.11957693096;EN1,2:-1.14043467721;ESRRA:-1.15414006069;PRDM1:-1.16380315754;HSF1,2:-1.21200811029;PPARG:-1.23191767993;TLX1..3_NFIC{dimer}:-1.23512600796;UFEwm:-1.24850700747;MTE{core}:-1.24944096975;XCPE1{core}:-1.2538494565;FOXL1:-1.26418581422;TBP:-1.26698433949;PATZ1:-1.27523420459;GTF2I:-1.27914152644;TOPORS:-1.28240278202;MAZ:-1.28503767358;TEF:-1.31793992489;POU3F1..4:-1.34892436407;bHLH_family:-1.36056268757;HIC1:-1.37788749964;EBF1:-1.38403359146;GZF1:-1.3936270308;XBP1:-1.41852806017;ZIC1..3:-1.49107352034;TFAP2B:-1.50258524398;TFDP1:-1.5093790433;RXR{A,B,G}:-1.51948755251;NKX3-2:-1.56023799461;TEAD1:-1.61600244421;POU6F1:-1.64776598649;TFAP2{A,C}:-1.85763211938;GTF2A1,2:-1.88940609568;SP1:-2.14797464026;PAX1,9:-2.15575028649;IKZF1:-2.23024146869
|top_motifs=PDX1:2.56327722985;T:2.56176922514;CDX1,2,4:2.3142705961;RUNX1..3:2.12226400744;ELF1,2,4:2.07025146032;FOX{F1,F2,J1}:1.74956536812;ETS1,2:1.7395186696;RORA:1.46287866117;FOX{D1,D2}:1.45984356594;LEF1_TCF7_TCF7L1,2:1.43110580424;FOXO1,3,4:1.40821097548;PBX1:1.38167255641;ELK1,4_GABP{A,B1}:1.37287328791;PAX3,7:1.32407479365;STAT1,3:1.29034306249;IRF1,2:1.19165958371;DMAP1_NCOR{1,2}_SMARC:1.18509037193;CRX:1.14025301035;SPI1:1.12860393748;TLX2:1.1253042076;GATA6:1.08784874121;IKZF2:1.03619450069;FOX{I1,J2}:1.00235786107;PAX6:0.983124582261;YY1:0.963659330019;FOXA2:0.941758772045;VSX1,2:0.878199623607;SPIB:0.849135171824;BREu{core}:0.794719498688;BPTF:0.763464706305;NFIX:0.762047513979;CUX2:0.703438085002;NKX2-1,4:0.642806707612;HAND1,2:0.60316195354;NKX6-1,2:0.599255272411;IRF7:0.590636198336;NR1H4:0.569942803301;STAT5{A,B}:0.547254011582;FOXP3:0.505741229109;TGIF1:0.503146448049;ZBTB16:0.480098925449;ATF5_CREB3:0.448850047676;ALX1:0.439244009579;AR:0.428061224776;MYOD1:0.4244159428;HOX{A6,A7,B6,B7}:0.414724084236;SOX5:0.414653552887;NANOG{mouse}:0.413932245363;SNAI1..3:0.406325407405;HES1:0.403568644514;CREB1:0.388295001442;ZEB1:0.388142730372;POU2F1..3:0.36997524666;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.334043441024;RFX2..5_RFXANK_RFXAP:0.284748496326;RBPJ:0.255908237793;PRRX1,2:0.231004084276;FOXN1:0.229157569382;TAL1_TCF{3,4,12}:0.207580950435;NFKB1_REL_RELA:0.184317042673;NKX2-2,8:0.172909444539;NR5A1,2:0.167692409659;NFIL3:0.164572638205;NRF1:0.162351478049;FOXQ1:0.15848824306;SPZ1:0.156349836586;FOXP1:0.129973213698;LMO2:0.106412140102;ADNP_IRX_SIX_ZHX:0.105140824247;MYB:0.0916175784134;HMX1:0.0892676053564;SOX2:0.0857119777551;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0850101050198;TBX4,5:0.0848385423777;ATF2:0.05536923817;OCT4_SOX2{dimer}:0.0330557499616;ZNF148:0.0288004042424;NFATC1..3:0.024348066004;SREBF1,2:-0.00264329907865;NANOG:-0.003453884929;PAX4:-0.00692671284777;PAX2:-0.0293592993889;ZNF143:-0.0961271285361;NR3C1:-0.128140918701;RXRA_VDR{dimer}:-0.137840553615;FOXD3:-0.148965360871;POU1F1:-0.149237374586;ARID5B:-0.156804491642;AHR_ARNT_ARNT2:-0.176311278223;JUN:-0.182454211621;STAT2,4,6:-0.195908104679;HNF4A_NR2F1,2:-0.208852769012;ATF6:-0.225253698432;HNF1A:-0.232291626976;HBP1_HMGB_SSRP1_UBTF:-0.267017584198;EP300:-0.30051699086;ZNF384:-0.332668552921;ATF4:-0.33877668957;CEBPA,B_DDIT3:-0.338990325478;E2F1..5:-0.353021493469;GFI1:-0.354087154661;HOX{A4,D4}:-0.370578529067;FOSL2:-0.387739521478;NFY{A,B,C}:-0.387867501907;HMGA1,2:-0.401703666272;FOXM1:-0.418767142991;GCM1,2:-0.422173346982;ESR1:-0.430723707428;MYFfamily:-0.464187201027;MTF1:-0.477918665105;NHLH1,2:-0.490841476862;NFE2L2:-0.492439922625;EVI1:-0.497830168043;BACH2:-0.499614588563;NKX2-3_NKX2-5:-0.500586130666;NKX3-1:-0.509287984989;RFX1:-0.511130118935;FOS_FOS{B,L1}_JUN{B,D}:-0.543327709548;TFAP4:-0.543475635681;ONECUT1,2:-0.567185708342;DBP:-0.591439915148;NFE2:-0.592631049643;AIRE:-0.611753951678;PAX5:-0.615772626279;ZNF423:-0.637385044798;MEF2{A,B,C,D}:-0.6390111773;HOXA9_MEIS1:-0.65160800806;SMAD1..7,9:-0.655208449944;ZNF238:-0.668176507285;CDC5L:-0.683534983786;HLF:-0.687151912841;REST:-0.699873420876;RREB1:-0.709591202567;GLI1..3:-0.744448533286;TP53:-0.753788160246;TFCP2:-0.757182329056;NFE2L1:-0.760978041958;MAFB:-0.770013327213;MYBL2:-0.771496385784;ALX4:-0.782776284731;EGR1..3:-0.810170431141;SRF:-0.817233632601;NR6A1:-0.888877016709;SOX{8,9,10}:-0.893480982991;POU5F1:-0.894921039289;PITX1..3:-0.912349206416;HOX{A5,B5}:-0.965617769708;MED-1{core}:-0.965834546803;GFI1B:-0.988948867979;ZBTB6:-0.995082397376;LHX3,4:-1.01369645756;SOX17:-1.02189425455;ZFP161:-1.03269023969;PAX8:-1.07423128083;MZF1:-1.08831081488;GATA4:-1.1104846843;HIF1A:-1.1171247415;KLF4:-1.11957693096;EN1,2:-1.14043467721;ESRRA:-1.15414006069;PRDM1:-1.16380315754;HSF1,2:-1.21200811029;PPARG:-1.23191767993;TLX1..3_NFIC{dimer}:-1.23512600796;UFEwm:-1.24850700747;MTE{core}:-1.24944096975;XCPE1{core}:-1.2538494565;FOXL1:-1.26418581422;TBP:-1.26698433949;PATZ1:-1.27523420459;GTF2I:-1.27914152644;TOPORS:-1.28240278202;MAZ:-1.28503767358;TEF:-1.31793992489;POU3F1..4:-1.34892436407;bHLH_family:-1.36056268757;HIC1:-1.37788749964;EBF1:-1.38403359146;GZF1:-1.3936270308;XBP1:-1.41852806017;ZIC1..3:-1.49107352034;TFAP2B:-1.50258524398;TFDP1:-1.5093790433;RXR{A,B,G}:-1.51948755251;NKX3-2:-1.56023799461;TEAD1:-1.61600244421;POU6F1:-1.64776598649;TFAP2{A,C}:-1.85763211938;GTF2A1,2:-1.88940609568;SP1:-2.14797464026;PAX1,9:-2.15575028649;IKZF1:-2.23024146869
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12196-129B9;search_select_hide=table117:FF:12196-129B9
}}
}}

Latest revision as of 18:34, 4 June 2020

Name:CD8+ T Cells (pluriselect), donor090309, donation3
Species:Human (Homo sapiens)
Library ID:CNhs12180,RDhi10016
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeT cell, CD8+
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
RNA-Seq  SAMD00013696
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12180 CAGE DRX008066 DRR008938
RDhi10016 RNA-Seq DRX012349 DRR013797
Accession ID Hg19

Library idBAMCTSS
CNhs12180 DRZ000363 DRZ001748
RDhi10016 DRZ002998
Accession ID Hg38

Library idBAMCTSS
CNhs12180 DRZ011713 DRZ013098
RDhi10016
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.143
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.284
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.441
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.259
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.826
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.537
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.288
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.375
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.463
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.169
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.463
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.384
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.217
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.681
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.19
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.603
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.205
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.29
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.29
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.935
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.884
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12180

Jaspar motifP-value
MA0002.26.49945e-9
MA0003.10.582
MA0004.10.847
MA0006.10.47
MA0007.10.913
MA0009.10.295
MA0014.10.916
MA0017.10.0509
MA0018.20.522
MA0019.10.717
MA0024.10.171
MA0025.10.461
MA0027.10.914
MA0028.12.02593e-4
MA0029.10.914
MA0030.10.442
MA0031.10.0368
MA0035.20.1
MA0038.10.104
MA0039.20.681
MA0040.10.728
MA0041.10.554
MA0042.10.69
MA0043.10.178
MA0046.10.816
MA0047.20.165
MA0048.10.509
MA0050.14.97052e-6
MA0051.10.00374
MA0052.10.0173
MA0055.10.936
MA0057.10.86
MA0058.10.804
MA0059.10.31
MA0060.10.0595
MA0061.10.00735
MA0062.21.09758e-13
MA0065.20.00826
MA0066.10.0697
MA0067.10.628
MA0068.10.832
MA0069.10.819
MA0070.10.59
MA0071.10.586
MA0072.10.236
MA0073.10.82
MA0074.10.513
MA0076.11.85774e-6
MA0077.10.139
MA0078.10.555
MA0079.20.248
MA0080.25.14786e-12
MA0081.10.0419
MA0083.10.0118
MA0084.10.835
MA0087.10.907
MA0088.10.0602
MA0090.10.00122
MA0091.10.738
MA0092.10.509
MA0093.10.961
MA0099.20.144
MA0100.10.446
MA0101.10.856
MA0102.20.685
MA0103.10.099
MA0104.20.122
MA0105.12.06824e-6
MA0106.10.619
MA0107.10.828
MA0108.21.24653e-10
MA0111.10.18
MA0112.20.0553
MA0113.10.232
MA0114.10.15
MA0115.10.889
MA0116.19.23863e-5
MA0117.10.705
MA0119.10.871
MA0122.10.476
MA0124.10.548
MA0125.10.589
MA0131.10.43
MA0135.10.328
MA0136.16.19133e-23
MA0137.20.283
MA0138.20.799
MA0139.10.00854
MA0140.10.123
MA0141.10.556
MA0142.10.806
MA0143.10.502
MA0144.10.43
MA0145.10.985
MA0146.10.392
MA0147.10.0975
MA0148.10.211
MA0149.10.0563
MA0150.10.739
MA0152.10.0649
MA0153.10.407
MA0154.10.00531
MA0155.10.761
MA0156.11.62197e-19
MA0157.10.0214
MA0159.10.0863
MA0160.10.365
MA0162.10.794
MA0163.11.80184e-14
MA0164.10.519
MA0258.10.0741
MA0259.10.384



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12180

Novel motifP-value
10.151
100.0191
1000.921
1010.203
1020.732
1030.158
1040.417
1050.114
1060.606
1070.367
1080.785
1090.0594
110.0556
1100.393
1110.182
1120.231
1130.236
1140.14
1150.186
1160.872
1170.00517
1180.407
1190.434
120.726
1200.247
1210.745
1220.45
1230.0205
1240.0455
1250.489
1260.379
1270.524
1280.649
1290.118
130.406
1300.726
1310.762
1320.921
1330.613
1340.732
1350.183
1360.863
1370.269
1380.265
1390.0101
140.294
1400.0214
1410.417
1420.4
1433.02914e-5
1440.712
1450.357
1460.112
1470.115
1480.124
1490.952
150.0528
1500.671
1510.341
1520.338
1530.4
1540.943
1550.0243
1560.576
1570.603
1580.295
1590.057
160.595
1600.31
1610.18
1620.589
1630.776
1640.279
1650.28
1660.546
1670.247
1680.0457
1690.51
170.588
180.403
190.593
20.623
200.938
210.449
220.909
230.942
240.545
250.0947
260.352
270.0664
280.45
290.0877
30.0381
300.516
310.717
320.33
330.249
340.862
350.0426
360.0113
370.16
380.592
390.583
40.476
400.371
410.17
420.0429
430.174
440.672
450.998
460.071
470.0522
480.135
490.0901
50.127
500.592
510.387
520.423
530.227
540.475
550.326
560.524
570.325
580.0601
590.299
61
600.293
610.105
620.0244
630.543
640.139
650.699
660.617
670.875
680.362
690.957
70.171
700.0052
710.0547
720.0702
730.634
740.429
750.0329
760.233
770.871
780.126
790.15
80.55
800.00188
810.269
820.123
830.547
840.563
850.975
860.255
870.734
880.903
890.839
90.514
900.012
910.848
920.291
930.241
940.0497
950.0148
960.0617
970.366
980.0719
990.279



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12180


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

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