FF:12209-129D4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=RNA-Seq@SAMD00013675 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008056;DRR008928;DRZ000353;DRZ001738;DRZ011703;DRZ013088!RNA-Seq;DRX012345;DRR013793;DRZ002994; | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12209-129D4 | |id=FF:12209-129D4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000025;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs12185!RDhi10011 | |||
|library_id_phase_based=2:CNhs12185 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12209 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12209 | |||
|name=CD19+ B Cells (pluriselect), donor090612, donation2 | |name=CD19+ B Cells (pluriselect), donor090612, donation2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12185,LSID975,release011,COMPLETED | |profile_hcage=CNhs12185,LSID975,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=2.15973 | |rna_weight_ug=2.15973 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.49200945693648e-215!GO:0043227;membrane-bound organelle;5.2434390543556e-199!GO:0043231;intracellular membrane-bound organelle;1.10375386657901e-198!GO:0043226;organelle;1.43148006838639e-182!GO:0043229;intracellular organelle;6.03336042945939e-182!GO:0005737;cytoplasm;2.05023039382165e-129!GO:0044422;organelle part;8.3667847752842e-113!GO:0044446;intracellular organelle part;5.06107268288213e-111!GO:0005634;nucleus;1.09773414606324e-99!GO:0044444;cytoplasmic part;2.03153275043044e-98!GO:0032991;macromolecular complex;5.42325718903467e-98!GO:0044237;cellular metabolic process;1.25941990551719e-92!GO:0043170;macromolecule metabolic process;3.60743583504738e-91!GO:0044238;primary metabolic process;3.79468918845677e-88!GO:0030529;ribonucleoprotein complex;9.53076749745806e-88!GO:0003723;RNA binding;4.00425793858517e-78!GO:0044428;nuclear part;9.74153148074265e-78!GO:0043233;organelle lumen;2.1771823769414e-69!GO:0031974;membrane-enclosed lumen;2.1771823769414e-69!GO:0010467;gene expression;3.84066178013215e-66!GO:0043283;biopolymer metabolic process;7.4810723553124e-64!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.02536241680058e-60!GO:0005739;mitochondrion;1.536394254018e-59!GO:0006396;RNA processing;3.59341278280779e-56!GO:0006412;translation;9.28072201654652e-55!GO:0005840;ribosome;1.49278877582102e-49!GO:0043234;protein complex;5.72596017877811e-48!GO:0031981;nuclear lumen;5.88812880683955e-47!GO:0016071;mRNA metabolic process;1.2546279178363e-44!GO:0005515;protein binding;1.59550168223012e-43!GO:0033036;macromolecule localization;3.91413362662263e-43!GO:0003676;nucleic acid binding;2.49293443230113e-42!GO:0003735;structural constituent of ribosome;2.95554108793577e-42!GO:0044429;mitochondrial part;3.6594493964182e-42!GO:0015031;protein transport;1.46639092005815e-41!GO:0045184;establishment of protein localization;1.72550895581042e-40!GO:0019538;protein metabolic process;2.62177408181538e-40!GO:0009059;macromolecule biosynthetic process;4.91331022159056e-40!GO:0008380;RNA splicing;4.91331022159056e-40!GO:0008104;protein localization;1.64819506002071e-39!GO:0031090;organelle membrane;3.02230418901603e-39!GO:0044267;cellular protein metabolic process;2.0824594022869e-38!GO:0031967;organelle envelope;2.8813772732144e-38!GO:0006397;mRNA processing;6.18906863964883e-38!GO:0031975;envelope;6.18906863964883e-38!GO:0033279;ribosomal subunit;9.2109400291184e-38!GO:0044260;cellular macromolecule metabolic process;1.11824366447231e-37!GO:0016070;RNA metabolic process;1.09552477472399e-35!GO:0009058;biosynthetic process;7.48947447036937e-33!GO:0044249;cellular biosynthetic process;8.05257161496362e-33!GO:0005829;cytosol;2.16498662733411e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.49115726570682e-31!GO:0005654;nucleoplasm;4.340308389192e-31!GO:0005681;spliceosome;1.5580306719992e-29!GO:0006259;DNA metabolic process;9.51449849596126e-29!GO:0046907;intracellular transport;2.38706017400822e-28!GO:0065003;macromolecular complex assembly;2.65980245229421e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.16432978643099e-28!GO:0006886;intracellular protein transport;3.36473887971869e-26!GO:0044445;cytosolic part;7.43363634649968e-26!GO:0005740;mitochondrial envelope;1.08236650486931e-25!GO:0019866;organelle inner membrane;1.56488025901059e-25!GO:0016043;cellular component organization and biogenesis;9.52568806388815e-25!GO:0022607;cellular component assembly;1.64529818800208e-24!GO:0031966;mitochondrial membrane;1.96422271970567e-24!GO:0044451;nucleoplasm part;2.14414845094485e-24!GO:0005743;mitochondrial inner membrane;1.96965431655407e-23!GO:0006119;oxidative phosphorylation;3.78087895935362e-21!GO:0006996;organelle organization and biogenesis;3.95709162964728e-21!GO:0000166;nucleotide binding;2.55952178763728e-20!GO:0051649;establishment of cellular localization;3.60502225887343e-20!GO:0006512;ubiquitin cycle;5.01257013497975e-20!GO:0022618;protein-RNA complex assembly;6.29274841339173e-20!GO:0015935;small ribosomal subunit;7.93901261036388e-20!GO:0051641;cellular localization;9.45287121412374e-20!GO:0031980;mitochondrial lumen;3.75398274746479e-19!GO:0005759;mitochondrial matrix;3.75398274746479e-19!GO:0015934;large ribosomal subunit;6.10194653134645e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.74808625749388e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.00623432896942e-18!GO:0044455;mitochondrial membrane part;2.25030356595552e-18!GO:0044265;cellular macromolecule catabolic process;2.30701617183904e-18!GO:0016462;pyrophosphatase activity;2.54903595131729e-18!GO:0017111;nucleoside-triphosphatase activity;4.17184253659737e-18!GO:0008134;transcription factor binding;7.87613441596806e-18!GO:0005730;nucleolus;9.5495684738023e-18!GO:0016874;ligase activity;1.11864803404362e-17!GO:0019941;modification-dependent protein catabolic process;1.73748839959452e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.73748839959452e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.14572300893142e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.30160399171225e-17!GO:0044257;cellular protein catabolic process;4.18554393159071e-17!GO:0043228;non-membrane-bound organelle;5.53397527287735e-17!GO:0043232;intracellular non-membrane-bound organelle;5.53397527287735e-17!GO:0043285;biopolymer catabolic process;6.20180258547018e-17!GO:0006974;response to DNA damage stimulus;7.83427054946512e-17!GO:0016604;nuclear body;1.97199554437221e-16!GO:0005746;mitochondrial respiratory chain;6.71077532730584e-16!GO:0006457;protein folding;1.01643771385698e-15!GO:0006605;protein targeting;2.4650829478988e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.84352423649432e-15!GO:0012501;programmed cell death;3.54173642282973e-15!GO:0006915;apoptosis;3.63170253644656e-15!GO:0008135;translation factor activity, nucleic acid binding;6.13643234450916e-15!GO:0009057;macromolecule catabolic process;7.20429867100455e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;9.37431593019223e-15!GO:0000375;RNA splicing, via transesterification reactions;9.37431593019223e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.37431593019223e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.40657338378964e-14!GO:0006281;DNA repair;1.90456634119348e-14!GO:0032553;ribonucleotide binding;2.66918760763377e-14!GO:0032555;purine ribonucleotide binding;2.66918760763377e-14!GO:0005761;mitochondrial ribosome;3.49105608133829e-14!GO:0000313;organellar ribosome;3.49105608133829e-14!GO:0012505;endomembrane system;3.96589963964338e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.58677967470266e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;5.21220758019589e-14!GO:0051276;chromosome organization and biogenesis;5.79970735570136e-14!GO:0017076;purine nucleotide binding;5.85664606332197e-14!GO:0050136;NADH dehydrogenase (quinone) activity;9.46799294316238e-14!GO:0003954;NADH dehydrogenase activity;9.46799294316238e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.46799294316238e-14!GO:0043412;biopolymer modification;1.19201217857253e-13!GO:0050794;regulation of cellular process;1.51032111896736e-13!GO:0008219;cell death;1.56139261258131e-13!GO:0016265;death;1.56139261258131e-13!GO:0006323;DNA packaging;2.21140303737048e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.41087872088256e-13!GO:0016887;ATPase activity;2.46520187501371e-13!GO:0005635;nuclear envelope;2.86828290647763e-13!GO:0030163;protein catabolic process;2.9094454518402e-13!GO:0042623;ATPase activity, coupled;3.65229229797896e-13!GO:0019222;regulation of metabolic process;3.905292187756e-13!GO:0031965;nuclear membrane;7.35262572182506e-13!GO:0016607;nuclear speck;1.01875908459316e-12!GO:0044248;cellular catabolic process;1.40051455563688e-12!GO:0042254;ribosome biogenesis and assembly;1.49507816208446e-12!GO:0005524;ATP binding;2.25911526879869e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.39975895368291e-12!GO:0042773;ATP synthesis coupled electron transport;2.39975895368291e-12!GO:0006413;translational initiation;3.56815581492613e-12!GO:0006913;nucleocytoplasmic transport;4.72902943914999e-12!GO:0032559;adenyl ribonucleotide binding;5.57207581254999e-12!GO:0003712;transcription cofactor activity;7.22712401680205e-12!GO:0051169;nuclear transport;7.70173751964424e-12!GO:0030964;NADH dehydrogenase complex (quinone);7.73313564055596e-12!GO:0045271;respiratory chain complex I;7.73313564055596e-12!GO:0005747;mitochondrial respiratory chain complex I;7.73313564055596e-12!GO:0005694;chromosome;1.07202616455051e-11!GO:0006446;regulation of translational initiation;1.43046791118274e-11!GO:0030554;adenyl nucleotide binding;1.64421880633334e-11!GO:0006464;protein modification process;2.04105153834288e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.17903617704847e-11!GO:0031323;regulation of cellular metabolic process;2.60827367449209e-11!GO:0003743;translation initiation factor activity;3.05594017386535e-11!GO:0008639;small protein conjugating enzyme activity;3.60174576171975e-11!GO:0004842;ubiquitin-protein ligase activity;6.04657790001624e-11!GO:0051082;unfolded protein binding;7.41266301534947e-11!GO:0051186;cofactor metabolic process;8.19049530895784e-11!GO:0009719;response to endogenous stimulus;1.27032793935999e-10!GO:0042981;regulation of apoptosis;1.59014514900377e-10!GO:0043687;post-translational protein modification;1.94405261657322e-10!GO:0048193;Golgi vesicle transport;1.98925599994076e-10!GO:0044453;nuclear membrane part;2.22902741826179e-10!GO:0043067;regulation of programmed cell death;2.28307466293347e-10!GO:0048770;pigment granule;2.44374146745995e-10!GO:0042470;melanosome;2.44374146745995e-10!GO:0004386;helicase activity;2.81437758744283e-10!GO:0019787;small conjugating protein ligase activity;4.30065962353087e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.82181095659493e-10!GO:0006333;chromatin assembly or disassembly;4.9708191819113e-10!GO:0016568;chromatin modification;5.82215937162715e-10!GO:0044427;chromosomal part;7.09432488326855e-10!GO:0008026;ATP-dependent helicase activity;7.17020045403396e-10!GO:0006399;tRNA metabolic process;7.45853222763666e-10!GO:0007049;cell cycle;8.34766968954958e-10!GO:0017038;protein import;1.24376814802293e-09!GO:0006350;transcription;1.31390700450575e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.46135616383621e-09!GO:0015078;hydrogen ion transmembrane transporter activity;1.73079368498172e-09!GO:0009259;ribonucleotide metabolic process;1.97129866844119e-09!GO:0010468;regulation of gene expression;1.97129866844119e-09!GO:0006403;RNA localization;2.21498821184738e-09!GO:0050657;nucleic acid transport;2.59518404312727e-09!GO:0051236;establishment of RNA localization;2.59518404312727e-09!GO:0050658;RNA transport;2.59518404312727e-09!GO:0065004;protein-DNA complex assembly;2.72195878293309e-09!GO:0016072;rRNA metabolic process;3.08174948153563e-09!GO:0005643;nuclear pore;3.12927720227197e-09!GO:0006164;purine nucleotide biosynthetic process;3.23061947832742e-09!GO:0019829;cation-transporting ATPase activity;4.24268808721492e-09!GO:0009260;ribonucleotide biosynthetic process;4.32826459442442e-09!GO:0006364;rRNA processing;4.33463842893555e-09!GO:0006163;purine nucleotide metabolic process;4.73533103738577e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.85279174127895e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.06924810385601e-09!GO:0005839;proteasome core complex (sensu Eukaryota);7.9527602599232e-09!GO:0006732;coenzyme metabolic process;8.26834063164996e-09!GO:0005794;Golgi apparatus;8.64288298760557e-09!GO:0009152;purine ribonucleotide biosynthetic process;9.89739453429782e-09!GO:0050789;regulation of biological process;1.15943252950037e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.36536478181627e-08!GO:0009150;purine ribonucleotide metabolic process;1.53074882192876e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.76434038882359e-08!GO:0044432;endoplasmic reticulum part;1.79282954889516e-08!GO:0043566;structure-specific DNA binding;1.93102267107302e-08!GO:0051246;regulation of protein metabolic process;1.937112771967e-08!GO:0003713;transcription coactivator activity;2.04128296815326e-08!GO:0005783;endoplasmic reticulum;2.15821067444149e-08!GO:0016192;vesicle-mediated transport;2.55908560343042e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.58117369138063e-08!GO:0015986;ATP synthesis coupled proton transport;2.9839273903101e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.9839273903101e-08!GO:0065002;intracellular protein transport across a membrane;3.4994757549568e-08!GO:0016881;acid-amino acid ligase activity;3.58447241316111e-08!GO:0004298;threonine endopeptidase activity;4.14957079151734e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.73617051056691e-08!GO:0051028;mRNA transport;8.82596254056866e-08!GO:0000785;chromatin;1.14000573036226e-07!GO:0008270;zinc ion binding;1.30575987471979e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.3099894691466e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.60762214677488e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.60762214677488e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.61704652720395e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.61704652720395e-07!GO:0046930;pore complex;1.61834084319879e-07!GO:0008565;protein transporter activity;1.84067381750722e-07!GO:0003697;single-stranded DNA binding;2.03918049097376e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.20199467895763e-07!GO:0032446;protein modification by small protein conjugation;2.27997006592792e-07!GO:0022402;cell cycle process;2.38430427265156e-07!GO:0000245;spliceosome assembly;2.41722010662831e-07!GO:0006754;ATP biosynthetic process;2.55642524209065e-07!GO:0006753;nucleoside phosphate metabolic process;2.55642524209065e-07!GO:0016787;hydrolase activity;2.58684335755076e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.71027440318209e-07!GO:0009060;aerobic respiration;2.93068884629231e-07!GO:0051726;regulation of cell cycle;3.14778559065962e-07!GO:0000074;regulation of progression through cell cycle;4.06528722190263e-07!GO:0032774;RNA biosynthetic process;4.19094122275293e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.19312940765155e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.50210646202515e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.71638067047658e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.91909783634955e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.91909783634955e-07!GO:0006351;transcription, DNA-dependent;4.99994414957971e-07!GO:0005789;endoplasmic reticulum membrane;5.29506134129691e-07!GO:0016567;protein ubiquitination;5.42250248894657e-07!GO:0009141;nucleoside triphosphate metabolic process;5.50675446787138e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.52703674813785e-07!GO:0006793;phosphorus metabolic process;6.55378737168368e-07!GO:0006796;phosphate metabolic process;6.55378737168368e-07!GO:0045449;regulation of transcription;7.05730818492734e-07!GO:0006366;transcription from RNA polymerase II promoter;8.83669827107962e-07!GO:0005768;endosome;9.66650508187319e-07!GO:0009055;electron carrier activity;1.00786678403272e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.06392320610316e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.06392320610316e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.06392320610316e-06!GO:0051188;cofactor biosynthetic process;1.10644056923377e-06!GO:0009056;catabolic process;1.13478953468207e-06!GO:0046034;ATP metabolic process;1.23883481239912e-06!GO:0007243;protein kinase cascade;1.35111209423184e-06!GO:0016779;nucleotidyltransferase activity;1.43613085369399e-06!GO:0045333;cellular respiration;1.49917336665136e-06!GO:0051170;nuclear import;1.58881291662784e-06!GO:0016310;phosphorylation;1.67869909080943e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.67986748028478e-06!GO:0045259;proton-transporting ATP synthase complex;1.73984881936982e-06!GO:0000151;ubiquitin ligase complex;1.81552467752578e-06!GO:0043038;amino acid activation;2.08460561141242e-06!GO:0006418;tRNA aminoacylation for protein translation;2.08460561141242e-06!GO:0043039;tRNA aminoacylation;2.08460561141242e-06!GO:0006334;nucleosome assembly;2.1813840957238e-06!GO:0065009;regulation of a molecular function;2.20173159411418e-06!GO:0031497;chromatin assembly;2.25919713798881e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.43341653241937e-06!GO:0006606;protein import into nucleus;2.9845641123329e-06!GO:0005793;ER-Golgi intermediate compartment;3.81577173797814e-06!GO:0006260;DNA replication;4.41170189993284e-06!GO:0016563;transcription activator activity;4.51997924112846e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.58059730415112e-06!GO:0006417;regulation of translation;4.60651634616125e-06!GO:0005770;late endosome;5.81420655305788e-06!GO:0046914;transition metal ion binding;6.07564666612609e-06!GO:0006099;tricarboxylic acid cycle;6.07564666612609e-06!GO:0046356;acetyl-CoA catabolic process;6.07564666612609e-06!GO:0043069;negative regulation of programmed cell death;6.21427643294457e-06!GO:0007005;mitochondrion organization and biogenesis;6.32480965597365e-06!GO:0016564;transcription repressor activity;6.32874427351754e-06!GO:0006084;acetyl-CoA metabolic process;7.5603047046548e-06!GO:0006461;protein complex assembly;7.5603047046548e-06!GO:0009615;response to virus;9.30125823476481e-06!GO:0043066;negative regulation of apoptosis;9.43513063273231e-06!GO:0006613;cotranslational protein targeting to membrane;9.45021152312985e-06!GO:0003724;RNA helicase activity;1.07896757684143e-05!GO:0031324;negative regulation of cellular metabolic process;1.10207412611639e-05!GO:0009108;coenzyme biosynthetic process;1.10838337547556e-05!GO:0019899;enzyme binding;1.41847235561509e-05!GO:0006401;RNA catabolic process;1.682520574386e-05!GO:0016740;transferase activity;1.68910944977823e-05!GO:0006355;regulation of transcription, DNA-dependent;1.95700590772085e-05!GO:0065007;biological regulation;2.34835177825708e-05!GO:0009117;nucleotide metabolic process;2.83601625562833e-05!GO:0005773;vacuole;2.97705717593124e-05!GO:0051168;nuclear export;3.08471247740266e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.12252336264045e-05!GO:0015399;primary active transmembrane transporter activity;3.12252336264045e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.49253261536058e-05!GO:0030120;vesicle coat;3.7069634944562e-05!GO:0030662;coated vesicle membrane;3.7069634944562e-05!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;3.85477830180101e-05!GO:0044440;endosomal part;3.92841930984294e-05!GO:0010008;endosome membrane;3.92841930984294e-05!GO:0003677;DNA binding;3.93153472659543e-05!GO:0006752;group transfer coenzyme metabolic process;4.31203452018218e-05!GO:0043065;positive regulation of apoptosis;4.48269648669617e-05!GO:0009109;coenzyme catabolic process;4.59432839925122e-05!GO:0042613;MHC class II protein complex;4.69400778331474e-05!GO:0005762;mitochondrial large ribosomal subunit;4.72564231395071e-05!GO:0000315;organellar large ribosomal subunit;4.72564231395071e-05!GO:0045786;negative regulation of progression through cell cycle;5.11817328133018e-05!GO:0048523;negative regulation of cellular process;5.48057652496232e-05!GO:0048475;coated membrane;6.23565600385342e-05!GO:0030117;membrane coat;6.23565600385342e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.53593835084013e-05!GO:0006612;protein targeting to membrane;6.61068655687079e-05!GO:0043068;positive regulation of programmed cell death;6.75644450014635e-05!GO:0031326;regulation of cellular biosynthetic process;7.05921909161436e-05!GO:0051187;cofactor catabolic process;7.13620064469064e-05!GO:0006916;anti-apoptosis;7.42587969116023e-05!GO:0000323;lytic vacuole;7.60039523530286e-05!GO:0005764;lysosome;7.60039523530286e-05!GO:0016481;negative regulation of transcription;7.74699237410687e-05!GO:0005667;transcription factor complex;0.000105926341869285!GO:0000314;organellar small ribosomal subunit;0.000145882342300706!GO:0005763;mitochondrial small ribosomal subunit;0.000145882342300706!GO:0031072;heat shock protein binding;0.000155336992773063!GO:0008186;RNA-dependent ATPase activity;0.000159516484610201!GO:0008033;tRNA processing;0.000165091555669712!GO:0003714;transcription corepressor activity;0.000165091555669712!GO:0016197;endosome transport;0.000165091555669712!GO:0003924;GTPase activity;0.000180713244425119!GO:0007264;small GTPase mediated signal transduction;0.000181642795880132!GO:0043492;ATPase activity, coupled to movement of substances;0.000185162470879997!GO:0003690;double-stranded DNA binding;0.000185622269794275!GO:0006402;mRNA catabolic process;0.000187498978875443!GO:0006818;hydrogen transport;0.00019079671603682!GO:0042113;B cell activation;0.000193687152535209!GO:0009892;negative regulation of metabolic process;0.000194154339078345!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000194154339078345!GO:0005885;Arp2/3 protein complex;0.000194638336223174!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000213363871674907!GO:0005525;GTP binding;0.000223306301312841!GO:0015992;proton transport;0.000239183432233305!GO:0008654;phospholipid biosynthetic process;0.000239183432233305!GO:0044431;Golgi apparatus part;0.000240880736307103!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000247130133679434!GO:0008632;apoptotic program;0.000250081517909598!GO:0043021;ribonucleoprotein binding;0.000253102784195963!GO:0003899;DNA-directed RNA polymerase activity;0.000268653299520313!GO:0000278;mitotic cell cycle;0.000294803094664996!GO:0043681;protein import into mitochondrion;0.000307393324348647!GO:0006917;induction of apoptosis;0.000308385337886065!GO:0050790;regulation of catalytic activity;0.000315705394196138!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000343144321344079!GO:0030384;phosphoinositide metabolic process;0.000398261441157954!GO:0012502;induction of programmed cell death;0.000433604942667097!GO:0007242;intracellular signaling cascade;0.0004837775361128!GO:0004004;ATP-dependent RNA helicase activity;0.000486930454210864!GO:0009889;regulation of biosynthetic process;0.000493817824558863!GO:0003729;mRNA binding;0.00050289293262189!GO:0000786;nucleosome;0.000518377527605057!GO:0044452;nucleolar part;0.000549489266020149!GO:0022890;inorganic cation transmembrane transporter activity;0.000578429748649311!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000579797818692718!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00059235365305209!GO:0005813;centrosome;0.000596633358959745!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000602622927463386!GO:0006310;DNA recombination;0.000608812153668476!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000665357887366552!GO:0008168;methyltransferase activity;0.000680962263299068!GO:0016741;transferase activity, transferring one-carbon groups;0.000686225025367352!GO:0006261;DNA-dependent DNA replication;0.000712904210839571!GO:0051427;hormone receptor binding;0.00080223115715364!GO:0006352;transcription initiation;0.000826207894240728!GO:0048519;negative regulation of biological process;0.000868673776679677!GO:0004518;nuclease activity;0.000872671020136053!GO:0008234;cysteine-type peptidase activity;0.000960894525318419!GO:0043623;cellular protein complex assembly;0.000968265148433978!GO:0009967;positive regulation of signal transduction;0.0010241244042013!GO:0009165;nucleotide biosynthetic process;0.00105542996386122!GO:0007265;Ras protein signal transduction;0.00115938772389333!GO:0031902;late endosome membrane;0.00118449166345285!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00121188456117696!GO:0051252;regulation of RNA metabolic process;0.00131370028716205!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00137882018393936!GO:0015002;heme-copper terminal oxidase activity;0.00137882018393936!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00137882018393936!GO:0004129;cytochrome-c oxidase activity;0.00137882018393936!GO:0005815;microtubule organizing center;0.00142622229406538!GO:0016251;general RNA polymerase II transcription factor activity;0.00143930050745292!GO:0006950;response to stress;0.00145330466247612!GO:0006650;glycerophospholipid metabolic process;0.00145937189115186!GO:0035257;nuclear hormone receptor binding;0.00146714309902233!GO:0045454;cell redox homeostasis;0.00152743969920922!GO:0003725;double-stranded RNA binding;0.00158040177828166!GO:0006383;transcription from RNA polymerase III promoter;0.00162916419886222!GO:0006414;translational elongation;0.00174997113345122!GO:0007006;mitochondrial membrane organization and biogenesis;0.00188576800876235!GO:0043488;regulation of mRNA stability;0.00194036187586227!GO:0043487;regulation of RNA stability;0.00194036187586227!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00197081443552794!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00197081443552794!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00197081443552794!GO:0016363;nuclear matrix;0.00197453287860625!GO:0032561;guanyl ribonucleotide binding;0.00197453287860625!GO:0019001;guanyl nucleotide binding;0.00197453287860625!GO:0046489;phosphoinositide biosynthetic process;0.00207714445430604!GO:0051789;response to protein stimulus;0.00213854649522458!GO:0006986;response to unfolded protein;0.00213854649522458!GO:0033116;ER-Golgi intermediate compartment membrane;0.00218898254106045!GO:0000087;M phase of mitotic cell cycle;0.00224910569538612!GO:0051336;regulation of hydrolase activity;0.00229037204781786!GO:0043087;regulation of GTPase activity;0.00231080782162144!GO:0048500;signal recognition particle;0.00245893690703967!GO:0046474;glycerophospholipid biosynthetic process;0.00253444925730721!GO:0051301;cell division;0.00261080133055367!GO:0005774;vacuolar membrane;0.0027420159205815!GO:0008047;enzyme activator activity;0.00275677021706631!GO:0016859;cis-trans isomerase activity;0.00277582164125761!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0029315605095163!GO:0007067;mitosis;0.00299350258535305!GO:0005684;U2-dependent spliceosome;0.00302802020930816!GO:0007034;vacuolar transport;0.0030609638901071!GO:0045892;negative regulation of transcription, DNA-dependent;0.00313572657291745!GO:0003711;transcription elongation regulator activity;0.00323584492896733!GO:0006405;RNA export from nucleus;0.00337984331426036!GO:0004674;protein serine/threonine kinase activity;0.0034220528636869!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00352563945040462!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00352563945040462!GO:0051920;peroxiredoxin activity;0.00355113445014779!GO:0006839;mitochondrial transport;0.00378571029554384!GO:0006891;intra-Golgi vesicle-mediated transport;0.00378571029554384!GO:0008312;7S RNA binding;0.00381908946893792!GO:0000139;Golgi membrane;0.00384376814746997!GO:0002764;immune response-regulating signal transduction;0.00398633956576793!GO:0046649;lymphocyte activation;0.00409783499767279!GO:0005048;signal sequence binding;0.00415188887237871!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00415188887237871!GO:0045047;protein targeting to ER;0.00415188887237871!GO:0005769;early endosome;0.00415774996049025!GO:0048471;perinuclear region of cytoplasm;0.00421051546153109!GO:0000118;histone deacetylase complex;0.00423401990460014!GO:0003678;DNA helicase activity;0.00428121278271675!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00452326629010602!GO:0045947;negative regulation of translational initiation;0.00453911783108319!GO:0003684;damaged DNA binding;0.00455295357305897!GO:0005637;nuclear inner membrane;0.00455295357305897!GO:0004527;exonuclease activity;0.00466118243385174!GO:0005798;Golgi-associated vesicle;0.00472183403666091!GO:0016853;isomerase activity;0.0052029337240065!GO:0006611;protein export from nucleus;0.00535669368937856!GO:0022403;cell cycle phase;0.00535669368937856!GO:0032200;telomere organization and biogenesis;0.00535669368937856!GO:0000723;telomere maintenance;0.00535669368937856!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00562822083035718!GO:0044437;vacuolar part;0.00573054310142968!GO:0030695;GTPase regulator activity;0.00595409072743451!GO:0006302;double-strand break repair;0.0061553160188095!GO:0005765;lysosomal membrane;0.00619105324835509!GO:0005741;mitochondrial outer membrane;0.00622852778449297!GO:0004532;exoribonuclease activity;0.00623240419329248!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00623240419329248!GO:0005657;replication fork;0.00630116336215001!GO:0016584;nucleosome positioning;0.00642806746200304!GO:0030433;ER-associated protein catabolic process;0.00642806746200304!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00642806746200304!GO:0006289;nucleotide-excision repair;0.00655029670930119!GO:0006626;protein targeting to mitochondrion;0.00661352858307426!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00669018468780445!GO:0008408;3'-5' exonuclease activity;0.00702252362035255!GO:0002376;immune system process;0.00708340821698243!GO:0006091;generation of precursor metabolites and energy;0.00749452054491136!GO:0048522;positive regulation of cellular process;0.00758081470613583!GO:0046467;membrane lipid biosynthetic process;0.00771780775542559!GO:0031252;leading edge;0.00799207804988501!GO:0031968;organelle outer membrane;0.00876566012780462!GO:0031625;ubiquitin protein ligase binding;0.00882495655150138!GO:0005669;transcription factor TFIID complex;0.00893889775871624!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00901171776588808!GO:0046822;regulation of nucleocytoplasmic transport;0.00907330240891126!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00930007368721152!GO:0019867;outer membrane;0.00936841112618801!GO:0032940;secretion by cell;0.00938346329945944!GO:0002757;immune response-activating signal transduction;0.0094097031854823!GO:0006376;mRNA splice site selection;0.00974259490173612!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00974259490173612!GO:0030880;RNA polymerase complex;0.0101886519778606!GO:0046966;thyroid hormone receptor binding;0.0104323318083159!GO:0003746;translation elongation factor activity;0.0106720646801429!GO:0016605;PML body;0.0107145293978008!GO:0051087;chaperone binding;0.0107809271001044!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0108514980260773!GO:0030658;transport vesicle membrane;0.0108724473016593!GO:0047485;protein N-terminus binding;0.0111864455938179!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0112425037450564!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0112425037450564!GO:0051539;4 iron, 4 sulfur cluster binding;0.0112955932640394!GO:0006607;NLS-bearing substrate import into nucleus;0.0113269203378745!GO:0045321;leukocyte activation;0.0115560302374841!GO:0015980;energy derivation by oxidation of organic compounds;0.0120187902553887!GO:0016272;prefoldin complex;0.012322393123007!GO:0009451;RNA modification;0.0125229727611482!GO:0009116;nucleoside metabolic process;0.0129498502427548!GO:0050851;antigen receptor-mediated signaling pathway;0.0132556349044499!GO:0007041;lysosomal transport;0.0135732304374495!GO:0043281;regulation of caspase activity;0.0136167530316625!GO:0019883;antigen processing and presentation of endogenous antigen;0.0140136142728113!GO:0043022;ribosome binding;0.0145587310379051!GO:0051052;regulation of DNA metabolic process;0.0145715190139358!GO:0042802;identical protein binding;0.0147108714928077!GO:0000781;chromosome, telomeric region;0.0149380246350317!GO:0030518;steroid hormone receptor signaling pathway;0.0149717072479568!GO:0019843;rRNA binding;0.0150788642021795!GO:0006595;polyamine metabolic process;0.0156141914835114!GO:0060090;molecular adaptor activity;0.015749035719213!GO:0030258;lipid modification;0.0162130421052782!GO:0019882;antigen processing and presentation;0.0165690113617343!GO:0045045;secretory pathway;0.0168733320691162!GO:0032259;methylation;0.0170012129185206!GO:0030663;COPI coated vesicle membrane;0.0171119679549544!GO:0030126;COPI vesicle coat;0.0171119679549544!GO:0015631;tubulin binding;0.0175762862447227!GO:0030137;COPI-coated vesicle;0.0175762862447227!GO:0000279;M phase;0.017877906714361!GO:0019783;small conjugating protein-specific protease activity;0.018139610970845!GO:0006506;GPI anchor biosynthetic process;0.0182920006699645!GO:0000049;tRNA binding;0.0188259167192111!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0190761558789102!GO:0000428;DNA-directed RNA polymerase complex;0.0190761558789102!GO:0030521;androgen receptor signaling pathway;0.0192706309665787!GO:0030118;clathrin coat;0.0198287199208004!GO:0031901;early endosome membrane;0.0201825310454831!GO:0032395;MHC class II receptor activity;0.0203021052733471!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.02062995247851!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.02062995247851!GO:0032318;regulation of Ras GTPase activity;0.0209452008237862!GO:0048002;antigen processing and presentation of peptide antigen;0.0211575023346385!GO:0006284;base-excision repair;0.0217527699542072!GO:0030041;actin filament polymerization;0.0217906297457194!GO:0008097;5S rRNA binding;0.0226176015630259!GO:0030660;Golgi-associated vesicle membrane;0.0226251798423456!GO:0004843;ubiquitin-specific protease activity;0.0228721902975971!GO:0000738;DNA catabolic process, exonucleolytic;0.0230248590140232!GO:0006338;chromatin remodeling;0.0231389403650547!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0231788943370529!GO:0004197;cysteine-type endopeptidase activity;0.0232541166189215!GO:0042824;MHC class I peptide loading complex;0.0232541166189215!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0239297015995715!GO:0006919;caspase activation;0.0239435406343586!GO:0005869;dynactin complex;0.0240961590548086!GO:0051098;regulation of binding;0.0241239185078952!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.025797394396935!GO:0006497;protein amino acid lipidation;0.0259761857500643!GO:0050871;positive regulation of B cell activation;0.0262421768428744!GO:0008139;nuclear localization sequence binding;0.0265311639476189!GO:0008094;DNA-dependent ATPase activity;0.0265607904518783!GO:0045730;respiratory burst;0.0265607904518783!GO:0043414;biopolymer methylation;0.0267530492006421!GO:0031124;mRNA 3'-end processing;0.0269201787275014!GO:0006505;GPI anchor metabolic process;0.0270058406955831!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0271700245392971!GO:0010257;NADH dehydrogenase complex assembly;0.0271700245392971!GO:0033108;mitochondrial respiratory chain complex assembly;0.0271700245392971!GO:0006672;ceramide metabolic process;0.0272258770062294!GO:0050853;B cell receptor signaling pathway;0.028214061558986!GO:0030867;rough endoplasmic reticulum membrane;0.028237633082203!GO:0048487;beta-tubulin binding;0.0282669679010085!GO:0015923;mannosidase activity;0.028365317678409!GO:0006914;autophagy;0.0285957538450473!GO:0000178;exosome (RNase complex);0.0286164131086217!GO:0019814;immunoglobulin complex;0.0288854165445686!GO:0019815;B cell receptor complex;0.0288854165445686!GO:0046979;TAP2 binding;0.0288854165445686!GO:0046977;TAP binding;0.0288854165445686!GO:0046978;TAP1 binding;0.0288854165445686!GO:0005832;chaperonin-containing T-complex;0.030198748374314!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0303853375744609!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0306448399244096!GO:0004003;ATP-dependent DNA helicase activity;0.0307921807629755!GO:0005521;lamin binding;0.031150259740927!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0311579966231314!GO:0018193;peptidyl-amino acid modification;0.0312964477680294!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0312964477680294!GO:0051223;regulation of protein transport;0.0314599940649689!GO:0005096;GTPase activator activity;0.0315906398413948!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0319160900933787!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0319160900933787!GO:0005083;small GTPase regulator activity;0.0319499905960148!GO:0008017;microtubule binding;0.0319499905960148!GO:0008538;proteasome activator activity;0.0320377513878072!GO:0004576;oligosaccharyl transferase activity;0.0324829836083389!GO:0000287;magnesium ion binding;0.0328983916084415!GO:0004540;ribonuclease activity;0.032919464069202!GO:0006516;glycoprotein catabolic process;0.0329198466275779!GO:0051092;activation of NF-kappaB transcription factor;0.0332095906900416!GO:0031647;regulation of protein stability;0.0332868500670651!GO:0051540;metal cluster binding;0.0335027281586501!GO:0051536;iron-sulfur cluster binding;0.0335027281586501!GO:0004722;protein serine/threonine phosphatase activity;0.0337758829695683!GO:0009112;nucleobase metabolic process;0.0342419719033589!GO:0000175;3'-5'-exoribonuclease activity;0.0342762848329845!GO:0000339;RNA cap binding;0.0349248915714836!GO:0009161;ribonucleoside monophosphate metabolic process;0.0358184341797552!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0358184341797552!GO:0051251;positive regulation of lymphocyte activation;0.0362481473520244!GO:0008250;oligosaccharyl transferase complex;0.0365383746629833!GO:0004221;ubiquitin thiolesterase activity;0.0366096870547941!GO:0000209;protein polyubiquitination;0.0374511860474532!GO:0007004;telomere maintenance via telomerase;0.0376626037807478!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0376705865145708!GO:0000123;histone acetyltransferase complex;0.0387553975491605!GO:0009607;response to biotic stimulus;0.0391666406679519!GO:0000119;mediator complex;0.0391699485634348!GO:0031123;RNA 3'-end processing;0.0399242824444082!GO:0008180;signalosome;0.0402216250607561!GO:0000303;response to superoxide;0.0404141466827014!GO:0043596;nuclear replication fork;0.0405224676097429!GO:0022406;membrane docking;0.0407210192540216!GO:0048278;vesicle docking;0.0407210192540216!GO:0043280;positive regulation of caspase activity;0.0411625829678959!GO:0051059;NF-kappaB binding;0.0416980879789849!GO:0007040;lysosome organization and biogenesis;0.0417322383140023!GO:0000059;protein import into nucleus, docking;0.0420463358857773!GO:0007050;cell cycle arrest;0.0425828950118687!GO:0006144;purine base metabolic process;0.0426806310206737!GO:0043550;regulation of lipid kinase activity;0.0427161595169355!GO:0016763;transferase activity, transferring pentosyl groups;0.042853864811935!GO:0008287;protein serine/threonine phosphatase complex;0.043232111656085!GO:0007021;tubulin folding;0.0433226273553106!GO:0006368;RNA elongation from RNA polymerase II promoter;0.043356831337143!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0436905248716587!GO:0005784;translocon complex;0.0439505727630815!GO:0046483;heterocycle metabolic process;0.0440554827386972!GO:0003682;chromatin binding;0.0441431012024664!GO:0051090;regulation of transcription factor activity;0.0444807876209844!GO:0031982;vesicle;0.0445382630468638!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0451058006965667!GO:0046128;purine ribonucleoside metabolic process;0.0453674586391746!GO:0042278;purine nucleoside metabolic process;0.0453674586391746!GO:0030125;clathrin vesicle coat;0.0466774228174294!GO:0030665;clathrin coated vesicle membrane;0.0466774228174294!GO:0015036;disulfide oxidoreductase activity;0.047245356427723!GO:0030119;AP-type membrane coat adaptor complex;0.047349679435402!GO:0030833;regulation of actin filament polymerization;0.0479236030429812!GO:0032508;DNA duplex unwinding;0.0488261370941814!GO:0032392;DNA geometric change;0.0488261370941814!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0488261370941814!GO:0048518;positive regulation of biological process;0.0492207028614367!GO:0009124;nucleoside monophosphate biosynthetic process;0.049239209926309!GO:0009123;nucleoside monophosphate metabolic process;0.049239209926309!GO:0017134;fibroblast growth factor binding;0.0493559995442088!GO:0032039;integrator complex;0.0494230008968936!GO:0006904;vesicle docking during exocytosis;0.0494230008968936!GO:0046519;sphingoid metabolic process;0.0498242374790694 | |||
|sample_id=12209 | |sample_id=12209 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=POU2F1..3:3.3047692326;POU5F1:3.20945799116;FOXA2:2.66248542242;PBX1:1.95460541429;ELF1,2,4:1.86846326877;DMAP1_NCOR{1,2}_SMARC:1.83460461801;TLX2:1.83306623834;FOX{I1,J2}:1.82753581051;FOX{F1,F2,J1}:1.75330376369;SPI1:1.4607040224;ELK1,4_GABP{A,B1}:1.42313366566;FOXO1,3,4:1.4168428197;IRF1,2:1.41091583274;CRX:1.35116641264;FOX{D1,D2}:1.32305728542;ETS1,2:1.30052798164;SPIB:1.29390721728;STAT1,3:1.13870156241;PAX6:1.11399152196;ESR1:1.08466028894;RUNX1..3:1.04896217417;YY1:1.01708216667;NFKB1_REL_RELA:0.977917261401;FOXP3:0.915684393104;NANOG{mouse}:0.906634765081;IRF7:0.886025014561;RFX2..5_RFXANK_RFXAP:0.842919032646;MYOD1:0.837141303932;AIRE:0.795069825832;LMO2:0.769674150543;CDX1,2,4:0.749259833548;ZEB1:0.726023125043;BPTF:0.711716721104;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.709238913943;OCT4_SOX2{dimer}:0.672686894807;ALX1:0.670762005469;NKX2-2,8:0.63180972621;RORA:0.608326886727;TGIF1:0.594724957127;HBP1_HMGB_SSRP1_UBTF:0.506998916983;SNAI1..3:0.504103847998;GATA6:0.479868634679;BREu{core}:0.475535819977;ATF5_CREB3:0.432291930102;NR5A1,2:0.402220364575;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.401031365207;VSX1,2:0.394942027553;CREB1:0.393278291266;CUX2:0.357942316902;FOXN1:0.353575193319;MYB:0.340216179714;HMX1:0.338299071482;HES1:0.336902769094;PDX1:0.325507208082;SOX{8,9,10}:0.320609503908;MEF2{A,B,C,D}:0.289027611508;NKX6-1,2:0.287410923467;FOXQ1:0.283226741518;SOX5:0.282762582516;PAX3,7:0.280240279867;NRF1:0.273421359381;ZNF148:0.25548565953;NFIX:0.254686303993;STAT5{A,B}:0.22143373441;ZNF143:0.213175097333;FOXP1:0.204707503938;LEF1_TCF7_TCF7L1,2:0.187062290771;NFIL3:0.184970930522;ATF2:0.149959974205;HOX{A6,A7,B6,B7}:0.129937426688;GLI1..3:0.123419600625;NHLH1,2:0.088407421397;PRRX1,2:0.0868442828553;SREBF1,2:0.0777612274537;ATF4:0.0306147050043;SPZ1:0.0214100186715;IKZF2:-0.00762941925825;EP300:-0.015567351764;PAX2:-0.0787557274514;HIF1A:-0.0871938686168;RBPJ:-0.119533841807;NKX2-1,4:-0.121647265838;NFY{A,B,C}:-0.129143788185;NFATC1..3:-0.130228375023;HAND1,2:-0.138344533709;ZFP161:-0.142314150831;HNF4A_NR2F1,2:-0.175750152657;TEF:-0.179378893102;ADNP_IRX_SIX_ZHX:-0.215228965093;TAL1_TCF{3,4,12}:-0.216888179468;SMAD1..7,9:-0.284943526357;CDC5L:-0.304505408407;PPARG:-0.318249501729;E2F1..5:-0.322348706703;TFAP4:-0.323969535214;EBF1:-0.332150233406;T:-0.356806471066;HNF1A:-0.357110160143;NKX2-3_NKX2-5:-0.401430598601;ALX4:-0.404052521487;POU1F1:-0.404588852971;ARID5B:-0.421762792897;AR:-0.425986796437;RXRA_VDR{dimer}:-0.438267923074;FOXL1:-0.453404815227;ZBTB16:-0.454030711537;TOPORS:-0.45545929304;PRDM1:-0.456882882406;EVI1:-0.475903343982;AHR_ARNT_ARNT2:-0.479419574159;NR6A1:-0.488202324127;CEBPA,B_DDIT3:-0.513173840988;bHLH_family:-0.51603603836;GFI1:-0.519639050355;ATF6:-0.521519931576;RFX1:-0.526568370109;FOSL2:-0.541269302248;TFCP2:-0.579645115137;FOS_FOS{B,L1}_JUN{B,D}:-0.587277985049;MYBL2:-0.625203323248;NR1H4:-0.650338930331;NANOG:-0.653508487838;PAX4:-0.656211727002;JUN:-0.665737219363;HOXA9_MEIS1:-0.672510274542;DBP:-0.691394863782;BACH2:-0.713207635608;MYFfamily:-0.719078292808;MAFB:-0.722893661287;XCPE1{core}:-0.735832145274;SRF:-0.757084526224;HOX{A4,D4}:-0.767774950486;POU6F1:-0.788102100946;ONECUT1,2:-0.810275153989;XBP1:-0.816936376946;PATZ1:-0.819683294382;ZNF238:-0.849775139311;TBP:-0.868357104934;NKX3-2:-0.900209519706;RXR{A,B,G}:-0.912311717739;RREB1:-0.913457220779;HLF:-0.916481162879;EGR1..3:-0.919963449954;SOX2:-0.929436171253;STAT2,4,6:-0.93204884399;MTE{core}:-0.96734368039;NFE2:-0.973796030766;HMGA1,2:-0.984052998904;MED-1{core}:-1.00310838083;EN1,2:-1.03021457207;MZF1:-1.04481440326;NKX3-1:-1.0537404555;HSF1,2:-1.06463613258;REST:-1.08397356865;TBX4,5:-1.08532030433;ZNF384:-1.09830674286;MTF1:-1.10063740556;TP53:-1.11620905188;NFE2L2:-1.12570341717;GATA4:-1.1271133331;SOX17:-1.12881603946;ZNF423:-1.19780383211;GFI1B:-1.23512437151;NR3C1:-1.23538441849;MAZ:-1.23794620687;HOX{A5,B5}:-1.27642795866;LHX3,4:-1.28591124982;SP1:-1.33549745272;PAX8:-1.36423334387;PITX1..3:-1.38942123818;UFEwm:-1.41082526924;GZF1:-1.43649783444;FOXM1:-1.43695241451;HIC1:-1.44883920118;ESRRA:-1.45961531167;GCM1,2:-1.49317411091;ZBTB6:-1.50123956752;TFAP2B:-1.54793234564;TFAP2{A,C}:-1.55949962296;GTF2I:-1.585877024;KLF4:-1.63557727434;NFE2L1:-1.69067837471;TEAD1:-1.69311297908;PAX5:-1.70578927416;POU3F1..4:-1.79877851376;PAX1,9:-1.80115953681;TLX1..3_NFIC{dimer}:-1.86982211917;FOXD3:-1.94585529661;GTF2A1,2:-1.98910431136;IKZF1:-1.99918024185;TFDP1:-2.01600391565;ZIC1..3:-2.17938274468 | |top_motifs=POU2F1..3:3.3047692326;POU5F1:3.20945799116;FOXA2:2.66248542242;PBX1:1.95460541429;ELF1,2,4:1.86846326877;DMAP1_NCOR{1,2}_SMARC:1.83460461801;TLX2:1.83306623834;FOX{I1,J2}:1.82753581051;FOX{F1,F2,J1}:1.75330376369;SPI1:1.4607040224;ELK1,4_GABP{A,B1}:1.42313366566;FOXO1,3,4:1.4168428197;IRF1,2:1.41091583274;CRX:1.35116641264;FOX{D1,D2}:1.32305728542;ETS1,2:1.30052798164;SPIB:1.29390721728;STAT1,3:1.13870156241;PAX6:1.11399152196;ESR1:1.08466028894;RUNX1..3:1.04896217417;YY1:1.01708216667;NFKB1_REL_RELA:0.977917261401;FOXP3:0.915684393104;NANOG{mouse}:0.906634765081;IRF7:0.886025014561;RFX2..5_RFXANK_RFXAP:0.842919032646;MYOD1:0.837141303932;AIRE:0.795069825832;LMO2:0.769674150543;CDX1,2,4:0.749259833548;ZEB1:0.726023125043;BPTF:0.711716721104;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.709238913943;OCT4_SOX2{dimer}:0.672686894807;ALX1:0.670762005469;NKX2-2,8:0.63180972621;RORA:0.608326886727;TGIF1:0.594724957127;HBP1_HMGB_SSRP1_UBTF:0.506998916983;SNAI1..3:0.504103847998;GATA6:0.479868634679;BREu{core}:0.475535819977;ATF5_CREB3:0.432291930102;NR5A1,2:0.402220364575;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.401031365207;VSX1,2:0.394942027553;CREB1:0.393278291266;CUX2:0.357942316902;FOXN1:0.353575193319;MYB:0.340216179714;HMX1:0.338299071482;HES1:0.336902769094;PDX1:0.325507208082;SOX{8,9,10}:0.320609503908;MEF2{A,B,C,D}:0.289027611508;NKX6-1,2:0.287410923467;FOXQ1:0.283226741518;SOX5:0.282762582516;PAX3,7:0.280240279867;NRF1:0.273421359381;ZNF148:0.25548565953;NFIX:0.254686303993;STAT5{A,B}:0.22143373441;ZNF143:0.213175097333;FOXP1:0.204707503938;LEF1_TCF7_TCF7L1,2:0.187062290771;NFIL3:0.184970930522;ATF2:0.149959974205;HOX{A6,A7,B6,B7}:0.129937426688;GLI1..3:0.123419600625;NHLH1,2:0.088407421397;PRRX1,2:0.0868442828553;SREBF1,2:0.0777612274537;ATF4:0.0306147050043;SPZ1:0.0214100186715;IKZF2:-0.00762941925825;EP300:-0.015567351764;PAX2:-0.0787557274514;HIF1A:-0.0871938686168;RBPJ:-0.119533841807;NKX2-1,4:-0.121647265838;NFY{A,B,C}:-0.129143788185;NFATC1..3:-0.130228375023;HAND1,2:-0.138344533709;ZFP161:-0.142314150831;HNF4A_NR2F1,2:-0.175750152657;TEF:-0.179378893102;ADNP_IRX_SIX_ZHX:-0.215228965093;TAL1_TCF{3,4,12}:-0.216888179468;SMAD1..7,9:-0.284943526357;CDC5L:-0.304505408407;PPARG:-0.318249501729;E2F1..5:-0.322348706703;TFAP4:-0.323969535214;EBF1:-0.332150233406;T:-0.356806471066;HNF1A:-0.357110160143;NKX2-3_NKX2-5:-0.401430598601;ALX4:-0.404052521487;POU1F1:-0.404588852971;ARID5B:-0.421762792897;AR:-0.425986796437;RXRA_VDR{dimer}:-0.438267923074;FOXL1:-0.453404815227;ZBTB16:-0.454030711537;TOPORS:-0.45545929304;PRDM1:-0.456882882406;EVI1:-0.475903343982;AHR_ARNT_ARNT2:-0.479419574159;NR6A1:-0.488202324127;CEBPA,B_DDIT3:-0.513173840988;bHLH_family:-0.51603603836;GFI1:-0.519639050355;ATF6:-0.521519931576;RFX1:-0.526568370109;FOSL2:-0.541269302248;TFCP2:-0.579645115137;FOS_FOS{B,L1}_JUN{B,D}:-0.587277985049;MYBL2:-0.625203323248;NR1H4:-0.650338930331;NANOG:-0.653508487838;PAX4:-0.656211727002;JUN:-0.665737219363;HOXA9_MEIS1:-0.672510274542;DBP:-0.691394863782;BACH2:-0.713207635608;MYFfamily:-0.719078292808;MAFB:-0.722893661287;XCPE1{core}:-0.735832145274;SRF:-0.757084526224;HOX{A4,D4}:-0.767774950486;POU6F1:-0.788102100946;ONECUT1,2:-0.810275153989;XBP1:-0.816936376946;PATZ1:-0.819683294382;ZNF238:-0.849775139311;TBP:-0.868357104934;NKX3-2:-0.900209519706;RXR{A,B,G}:-0.912311717739;RREB1:-0.913457220779;HLF:-0.916481162879;EGR1..3:-0.919963449954;SOX2:-0.929436171253;STAT2,4,6:-0.93204884399;MTE{core}:-0.96734368039;NFE2:-0.973796030766;HMGA1,2:-0.984052998904;MED-1{core}:-1.00310838083;EN1,2:-1.03021457207;MZF1:-1.04481440326;NKX3-1:-1.0537404555;HSF1,2:-1.06463613258;REST:-1.08397356865;TBX4,5:-1.08532030433;ZNF384:-1.09830674286;MTF1:-1.10063740556;TP53:-1.11620905188;NFE2L2:-1.12570341717;GATA4:-1.1271133331;SOX17:-1.12881603946;ZNF423:-1.19780383211;GFI1B:-1.23512437151;NR3C1:-1.23538441849;MAZ:-1.23794620687;HOX{A5,B5}:-1.27642795866;LHX3,4:-1.28591124982;SP1:-1.33549745272;PAX8:-1.36423334387;PITX1..3:-1.38942123818;UFEwm:-1.41082526924;GZF1:-1.43649783444;FOXM1:-1.43695241451;HIC1:-1.44883920118;ESRRA:-1.45961531167;GCM1,2:-1.49317411091;ZBTB6:-1.50123956752;TFAP2B:-1.54793234564;TFAP2{A,C}:-1.55949962296;GTF2I:-1.585877024;KLF4:-1.63557727434;NFE2L1:-1.69067837471;TEAD1:-1.69311297908;PAX5:-1.70578927416;POU3F1..4:-1.79877851376;PAX1,9:-1.80115953681;TLX1..3_NFIC{dimer}:-1.86982211917;FOXD3:-1.94585529661;GTF2A1,2:-1.98910431136;IKZF1:-1.99918024185;TFDP1:-2.01600391565;ZIC1..3:-2.17938274468 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12209-129D4;search_select_hide=table117:FF:12209-129D4 | |||
}} | }} | ||
Latest revision as of 18:34, 4 June 2020
| Name: | CD19+ B Cells (pluriselect), donor090612, donation2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12185,RDhi10011 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12185
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12185
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0937 |
| 10 | 10 | 0.0493 |
| 100 | 100 | 0.595 |
| 101 | 101 | 0.392 |
| 102 | 102 | 0.68 |
| 103 | 103 | 0.113 |
| 104 | 104 | 0.174 |
| 105 | 105 | 0.262 |
| 106 | 106 | 0.663 |
| 107 | 107 | 0.361 |
| 108 | 108 | 0.362 |
| 109 | 109 | 0.0587 |
| 11 | 11 | 0.087 |
| 110 | 110 | 0.199 |
| 111 | 111 | 0.104 |
| 112 | 112 | 0.239 |
| 113 | 113 | 0.0365 |
| 114 | 114 | 0.354 |
| 115 | 115 | 0.817 |
| 116 | 116 | 0.864 |
| 117 | 117 | 0.00231 |
| 118 | 118 | 0.2 |
| 119 | 119 | 0.998 |
| 12 | 12 | 0.816 |
| 120 | 120 | 0.561 |
| 121 | 121 | 0.356 |
| 122 | 122 | 0.32 |
| 123 | 123 | 0.103 |
| 124 | 124 | 0.0984 |
| 125 | 125 | 0.346 |
| 126 | 126 | 0.11 |
| 127 | 127 | 0.533 |
| 128 | 128 | 0.558 |
| 129 | 129 | 0.718 |
| 13 | 13 | 0.402 |
| 130 | 130 | 0.358 |
| 131 | 131 | 0.716 |
| 132 | 132 | 0.346 |
| 133 | 133 | 0.00482 |
| 134 | 134 | 0.523 |
| 135 | 135 | 0.342 |
| 136 | 136 | 0.416 |
| 137 | 137 | 0.0633 |
| 138 | 138 | 0.355 |
| 139 | 139 | 0.0702 |
| 14 | 14 | 0.359 |
| 140 | 140 | 0.672 |
| 141 | 141 | 0.253 |
| 142 | 142 | 0.72 |
| 143 | 143 | 0.0369 |
| 144 | 144 | 0.752 |
| 145 | 145 | 0.211 |
| 146 | 146 | 0.163 |
| 147 | 147 | 0.0815 |
| 148 | 148 | 0.143 |
| 149 | 149 | 0.53 |
| 15 | 15 | 0.207 |
| 150 | 150 | 0.711 |
| 151 | 151 | 0.439 |
| 152 | 152 | 0.856 |
| 153 | 153 | 0.65 |
| 154 | 154 | 0.776 |
| 155 | 155 | 0.00795 |
| 156 | 156 | 0.385 |
| 157 | 157 | 0.263 |
| 158 | 158 | 0.141 |
| 159 | 159 | 0.184 |
| 16 | 16 | 0.98 |
| 160 | 160 | 0.284 |
| 161 | 161 | 0.114 |
| 162 | 162 | 0.993 |
| 163 | 163 | 0.206 |
| 164 | 164 | 0.596 |
| 165 | 165 | 0.255 |
| 166 | 166 | 0.258 |
| 167 | 167 | 0.14 |
| 168 | 168 | 0.147 |
| 169 | 169 | 0.443 |
| 17 | 17 | 0.94 |
| 18 | 18 | 0.548 |
| 19 | 19 | 0.883 |
| 2 | 2 | 0.972 |
| 20 | 20 | 0.792 |
| 21 | 21 | 0.816 |
| 22 | 22 | 0.725 |
| 23 | 23 | 0.695 |
| 24 | 24 | 0.321 |
| 25 | 25 | 0.0353 |
| 26 | 26 | 0.182 |
| 27 | 27 | 0.242 |
| 28 | 28 | 0.513 |
| 29 | 29 | 0.0668 |
| 3 | 3 | 0.0371 |
| 30 | 30 | 0.454 |
| 31 | 31 | 0.732 |
| 32 | 32 | 0.27 |
| 33 | 33 | 0.376 |
| 34 | 34 | 0.755 |
| 35 | 35 | 0.174 |
| 36 | 36 | 0.0252 |
| 37 | 37 | 0.11 |
| 38 | 38 | 0.364 |
| 39 | 39 | 0.52 |
| 4 | 4 | 0.576 |
| 40 | 40 | 0.154 |
| 41 | 41 | 0.177 |
| 42 | 42 | 0.0822 |
| 43 | 43 | 0.155 |
| 44 | 44 | 0.391 |
| 45 | 45 | 0.88 |
| 46 | 46 | 0.203 |
| 47 | 47 | 0.0738 |
| 48 | 48 | 0.111 |
| 49 | 49 | 0.122 |
| 5 | 5 | 0.307 |
| 50 | 50 | 0.978 |
| 51 | 51 | 0.463 |
| 52 | 52 | 0.448 |
| 53 | 53 | 0.376 |
| 54 | 54 | 0.844 |
| 55 | 55 | 0.119 |
| 56 | 56 | 0.591 |
| 57 | 57 | 0.63 |
| 58 | 58 | 0.0161 |
| 59 | 59 | 0.266 |
| 6 | 6 | 0.848 |
| 60 | 60 | 0.582 |
| 61 | 61 | 0.0294 |
| 62 | 62 | 0.0178 |
| 63 | 63 | 0.681 |
| 64 | 64 | 0.214 |
| 65 | 65 | 0.565 |
| 66 | 66 | 0.712 |
| 67 | 67 | 0.361 |
| 68 | 68 | 0.729 |
| 69 | 69 | 0.757 |
| 7 | 7 | 0.123 |
| 70 | 70 | 0.128 |
| 71 | 71 | 0.0497 |
| 72 | 72 | 0.0401 |
| 73 | 73 | 0.504 |
| 74 | 74 | 0.372 |
| 75 | 75 | 0.00773 |
| 76 | 76 | 0.0891 |
| 77 | 77 | 0.812 |
| 78 | 78 | 0.146 |
| 79 | 79 | 0.443 |
| 8 | 8 | 0.538 |
| 80 | 80 | 0.00255 |
| 81 | 81 | 0.183 |
| 82 | 82 | 0.0824 |
| 83 | 83 | 0.561 |
| 84 | 84 | 0.329 |
| 85 | 85 | 0.813 |
| 86 | 86 | 0.105 |
| 87 | 87 | 0.0965 |
| 88 | 88 | 0.723 |
| 89 | 89 | 0.829 |
| 9 | 9 | 0.363 |
| 90 | 90 | 0.0475 |
| 91 | 91 | 0.842 |
| 92 | 92 | 0.546 |
| 93 | 93 | 0.736 |
| 94 | 94 | 0.0357 |
| 95 | 95 | 0.00616 |
| 96 | 96 | 0.501 |
| 97 | 97 | 0.556 |
| 98 | 98 | 0.0864 |
| 99 | 99 | 0.103 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12185
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000025 CD19-positive B cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
