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{{f5samples
{{f5samples
|id=FF:12224-129F1
|DRA_sample_Accession=CAGE@SAMD00005606
|name=CD133+ stem cells - adult bone marrow derived, pool1
|accession_numbers=CAGE;DRX008047;DRR008919;DRZ000344;DRZ001729;DRZ011694;DRZ013079
|sample_id=12224
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002371,UBERON:0001474,UBERON:0002384,UBERON:0000479,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0010317,UBERON:0002204,UBERON:0001434,UBERON:0002390,UBERON:0002193,UBERON:0002405
|rna_tube_id=129F1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000034,CL:0000037,CL:0002092,CL:0001024
|rna_box=129
|rna_position=F1
|sample_cell_lot=BM2368
|sample_cell_catalog=ABM026F
|sample_company=Stem cell technologies
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=bone marrow
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.48
|rna_od260/280=1.93
|sample_cell_type=stem cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=1.40319
|rna_concentration=0.05197
|sample_note=
|profile_hcage=CNhs12552,LSID921,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000988,CL:0001024,CL:0002092,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000027,FF:0000021,FF:0000001,FF:0000020
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.19!155.31!IRF8;;chr2:68592406..68592424,+!p1@PLEK!2.09!123.31!PLEK;;chr21:39870339..39870443,-!p1@ERG!2.03!105.99!ERG;;chr6:135502501..135502546,+!p1@MYB!1.99!114.50!MYB;;chr11:47400078..47400106,-!p1@SPI1!1.90!77.80!SPI1;;chr6:135502408..135502459,+!p2@MYB!1.77!66.65!MYB;;chr12:54694758..54694805,-!p1@NFE2!1.76!67.53!NFE2;;chr7:50344289..50344323,+!p1@IKZF1!1.76!56.96!IKZF1;;chr7:115670804..115670825,-!p1@TFEC!1.76!56.37!TFEC;;chr19:13213662..13213686,-!p1@LYL1!1.63!60.19!LYL1;;chr19:45971246..45971265,+!p1@FOSB!1.61!697.59!FOSB;;chr9:20382446..20382493,-!p4@MLLT3!1.56!35.23!MLLT3;;chr12:54694807..54694832,-!p3@NFE2!1.54!33.47!NFE2;;chr2:16080659..16080685,+!p1@MYCN!1.49!29.65!MYCN;;chr6:144385698..144385742,-!p2@PLAGL1!1.47!34.06!PLAGL1;;chr6:126240442..126240459,+!p4@NCOA7!1.46!34.94!NCOA7;;chr19:33793430..33793447,-!p1@CEBPA!1.45!110.10!CEBPA;;chr4:57522598..57522664,-!p3@HOPX!1.42!25.25!HOPX;;chr2:100759010..100759035,-!p1@AFF3!1.41!24.66!AFF3;;chr2:60780607..60780624,-!p2@BCL11A!1.40!71.64!BCL11A;;chr7:50344251..50344288,+!p3@IKZF1!1.38!22.90!IKZF1;;chr3:128212033..128212051,-!p1@GATA2!1.35!21.43!GATA2;;chrY:21906594..21906622,-!p1@KDM5D!1.35!21.43!KDM5D;;chr6:126240463..126240489,+!p6@NCOA7!1.34!23.49!NCOA7;;chr19:13213511..13213545,-!p2@LYL1!1.34!22.61!LYL1;;chr2:100759037..100759058,-!p2@AFF3!1.32!19.96!AFF3;;chr4:57522674..57522699,-!p5@HOPX!1.32!19.96!HOPX;;chr6:126240380..126240430,+!p2@NCOA7!1.31!49.62!NCOA7;;chr21:36421535..36421610,-!p2@RUNX1!1.29!65.18!RUNX1;;chr2:145277640..145277771,-!p1@ZEB2!1.27!227.83!ZEB2;;chr2:68592394..68592405,+!p2@PLEK!1.26!17.32!PLEK;;chr7:27192185..27192209,-!p1@HOXA3!1.26!17.32!HOXA3;;chr13:41593425..41593480,-!p1@ELF1!1.24!101.59!ELF1;;chr1:25256756..25256774,-!p1@RUNX3!1.24!30.53!RUNX3;;chr11:47400062..47400077,-!p2@SPI1!1.24!16.44!SPI1;;chr17:53342311..53342400,+!p1@HLF!1.23!18.20!HLF;;chr6:135502472..135502489,+!p3@MYB!1.23!16.15!MYB;;chr7:27205136..27205164,-!p1@HOXA9!1.23!16.15!HOXA9;;chr12:11802547..11802560,+!p5@ETV6!1.22!21.73!ETV6;;chr4:57522166..57522260,-!p2@HOPX!1.19!16.74!HOPX;;chr7:137620650..137620677,-!p3@CREB3L2!1.17!13.80!CREB3L2;;chrX:106960285..106960299,-!p1@TSC22D3!1.16!353.79!TSC22D3;;chr10:94449703..94449718,+!p1@HHEX!1.16!52.26!HHEX;;chr7:50343634..50343717,+!p2@IKZF1!1.14!12.92!IKZF1;;chr14:75745523..75745537,+!p1@FOS!1.13!1475.05!FOS;;chr9:3525727..3525828,-!p2@RFX3!1.13!31.71!RFX3;;chr14:75988771..75988826,+!p1@BATF!1.13!16.74!BATF;;chr3:63953435..63953499,+!p1@ATXN7!1.13!12.62!ATXN7;;chrX:106960180..106960197,-!p2@TSC22D3!1.12!46.68!TSC22D3;;chr13:72441315..72441454,-!p1@DACH1!1.12!24.66!DACH1;;chr18:53257001..53257015,-!p5@TCF4!1.12!20.85!TCF4;;chr20:50159198..50159299,-!p1@NFATC2!1.12!17.91!NFATC2;;chr7:137620684..137620711,-!p4@CREB3L2!1.12!12.33!CREB3L2;;chrX:84499081..84499115,+!p2@ZNF711!1.11!17.62!ZNF711;;chr9:135854091..135854159,+!p1@GFI1B!1.11!11.74!GFI1B;;chr11:47399947..47399961,-!p3@SPI1!1.10!11.45!SPI1;;chr3:71631151..71631194,-!p15@FOXP1!1.09!12.62!FOXP1;;chr3:18486354..18486377,-!p2@SATB1!1.08!13.80!SATB1;;chr7:99680193..99680204,-!p2@ZNF3!1.08!11.16!ZNF3;;chr5:88179195..88179224,-!p3@MEF2C!1.07!17.03!MEF2C;;chr11:47399996..47400014,-!p4@SPI1!1.06!10.57!SPI1;;chr5:88178983..88179012,-!p1@MEF2C!1.05!80.45!MEF2C;;chr6:20402102..20402152,+!p1@E2F3!1.05!41.98!E2F3;;chr1:92951607..92951661,-!p1@GFI1!1.05!10.28!GFI1;;chr12:11802753..11802834,+!p2@ETV6!1.04!49.91!ETV6;;chr2:60781201..60781258,-!p3@BCL11A!1.04!9.98!BCL11A;;chr4:57522513..57522548,-!p4@HOPX!1.04!9.98!HOPX;;chr10:94449675..94449694,+!p2@HHEX!1.03!26.42!HHEX;;chr19:47616992..47617011,-!p4@ZC3H4!1.03!20.85!ZC3H4;;chr8:81397846..81397860,+!p3@ZBTB10!1.03!12.33!ZBTB10;;chr7:63505799..63505904,+!p1@ZNF727!1.03!9.69!ZNF727;;chr2:60780580..60780590,-!p9@BCL11A!1.03!9.69!BCL11A;;chrY:2803415..2803468,+!p1@ZFY!1.02!9.40!ZFY;;chr19:50922187..50922204,+!p1@SPIB!1.02!9.40!SPIB;;chr2:208031542..208031595,-!p2@KLF7!1.01!67.23!KLF7;;chr14:64971288..64971316,-!p2@ZBTB25!1.01!29.07!ZBTB25;;chr19:24097706..24097731,+!p2@ZNF726!1.01!17.91!ZNF726;;chrX:106960221..106960236,-!p3@TSC22D3!1.00!25.54!TSC22D3;;chr11:47400045..47400060,-!p6@SPI1!1.00!9.10!SPI1;;chr2:60780546..60780555,-!p10@BCL11A!1.00!9.10!BCL11A;;chr3:22414241..22414278,-!p5@ZNF385D!0.99!8.81!ZNF385D;;chrX:48644984..48645005,+!p1@GATA1!0.99!8.81!GATA1;;chr7:128577972..128578047,+!p1@IRF5!0.97!13.21!IRF5;;chr11:128563948..128564003,+!p1@FLI1!0.96!100.70!FLI1;;chr3:101546827..101546847,+!p2@NFKBIZ!0.96!11.45!NFKBIZ;;chr17:38497662..38497713,+!p4@RARA!0.96!9.40!RARA;;chr2:208394817..208394834,+!p3@CREB1!0.95!33.18!CREB1;;chr19:13213954..13214021,-!p4@LYL1!0.94!7.63!LYL1;;chr19:22235279..22235301,+!p1@ZNF257!0.93!14.68!ZNF257;;chr1:156470515..156470542,-!p2@MEF2D!0.92!39.64!MEF2D;;chr13:72440772..72440847,-!p5@DACH1!0.92!7.34!DACH1;;chr19:18392422..18392440,-!p1@JUND!0.91!1022.32!JUND;;chr19:57901326..57901385,+!p2@ZNF548!0.91!17.91!ZNF548;;chr12:54694653.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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000037;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000837;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002092;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD133%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520pool1.CNhs12552.12224-129F1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD133%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520pool1.CNhs12552.12224-129F1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD133%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520pool1.CNhs12552.12224-129F1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD133%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520pool1.CNhs12552.12224-129F1.hg38.nobarcode.ctss.bed.gz
|id=FF:12224-129F1
|is_a=EFO:0002091;;FF:0000020
|is_obsolete=
|library_id=CNhs12552
|library_id_phase_based=2:CNhs12552
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12224
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12224
|name=CD133+ stem cells - adult bone marrow derived, pool1
|namespace=FANTOM5
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|profile_cagescan=,,,
|profile_hcage=CNhs12552,LSID921,release012,COMPLETED
|profile_rnaseq=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=129
|rna_catalog_number=
|rna_concentration=0.05197
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.48
|rna_od260/280=1.93
|rna_position=F1
|rna_rin=
|rna_sample_type=
|rna_tube_id=129F1
|rna_weight_ug=1.40319
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=ABM026F
|sample_cell_line=
|sample_cell_lot=BM2368
|sample_cell_type=stem cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Stem cell technologies
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.85219399224787e-267!GO:0043227;membrane-bound organelle;2.11600514618856e-240!GO:0043231;intracellular membrane-bound organelle;5.04092111051659e-240!GO:0043226;organelle;1.75402257560159e-222!GO:0043229;intracellular organelle;8.36543689341176e-222!GO:0005737;cytoplasm;2.88644631688926e-158!GO:0044422;organelle part;6.84747533671225e-141!GO:0044446;intracellular organelle part;4.6249467154629e-139!GO:0005634;nucleus;1.70832236370021e-122!GO:0044237;cellular metabolic process;6.27840111595298e-120!GO:0044444;cytoplasmic part;2.39399956597471e-116!GO:0044238;primary metabolic process;1.42221372461776e-115!GO:0043170;macromolecule metabolic process;8.89909347081384e-113!GO:0032991;macromolecular complex;1.2516787948731e-107!GO:0030529;ribonucleoprotein complex;6.23897661230274e-99!GO:0003723;RNA binding;1.5867413405914e-87!GO:0044428;nuclear part;9.73867333671787e-87!GO:0043233;organelle lumen;2.87085613026146e-80!GO:0031974;membrane-enclosed lumen;2.87085613026146e-80!GO:0005739;mitochondrion;3.33672815667546e-77!GO:0043283;biopolymer metabolic process;4.60583714564538e-75!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.20412694542854e-73!GO:0010467;gene expression;1.82793578596594e-68!GO:0005840;ribosome;1.99161185888261e-58!GO:0006412;translation;1.18490021795998e-57!GO:0006396;RNA processing;1.45739687629719e-57!GO:0005515;protein binding;1.1905275418005e-52!GO:0043234;protein complex;1.26054591507407e-52!GO:0031981;nuclear lumen;5.7050139038156e-51!GO:0003735;structural constituent of ribosome;9.23920613051505e-51!GO:0003676;nucleic acid binding;1.80061532960392e-50!GO:0044429;mitochondrial part;2.50369842066373e-50!GO:0006259;DNA metabolic process;3.50309143599213e-49!GO:0019538;protein metabolic process;3.2531630475454e-48!GO:0016071;mRNA metabolic process;5.36539753274005e-46!GO:0044267;cellular protein metabolic process;2.79033371840388e-45!GO:0033279;ribosomal subunit;1.04050623383903e-44!GO:0044260;cellular macromolecule metabolic process;1.14329342544123e-44!GO:0009059;macromolecule biosynthetic process;7.57974940292425e-44!GO:0031967;organelle envelope;1.30135742088066e-43!GO:0031975;envelope;3.29918370108365e-43!GO:0008380;RNA splicing;1.89749641745388e-41!GO:0031090;organelle membrane;1.5776412026169e-40!GO:0044249;cellular biosynthetic process;2.06058668896272e-40!GO:0009058;biosynthetic process;2.80499749284916e-40!GO:0006397;mRNA processing;1.8709318424011e-39!GO:0033036;macromolecule localization;2.61769058535075e-38!GO:0005829;cytosol;2.81860147160977e-38!GO:0065003;macromolecular complex assembly;4.56942948130408e-37!GO:0015031;protein transport;7.32230933015717e-37!GO:0016070;RNA metabolic process;2.47086948454991e-36!GO:0045184;establishment of protein localization;7.5653429590069e-35!GO:0016043;cellular component organization and biogenesis;7.65499689560013e-35!GO:0008104;protein localization;1.71168648845374e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.73896990009901e-34!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.15125274786011e-33!GO:0006996;organelle organization and biogenesis;8.0491574107186e-33!GO:0022607;cellular component assembly;2.13204721875241e-32!GO:0005681;spliceosome;1.13243819232707e-31!GO:0005654;nucleoplasm;1.32034280472974e-31!GO:0019866;organelle inner membrane;1.35604914550151e-31!GO:0005740;mitochondrial envelope;2.53328534083413e-31!GO:0031966;mitochondrial membrane;1.37246452011833e-29!GO:0044445;cytosolic part;1.67663761167817e-29!GO:0043228;non-membrane-bound organelle;8.42185774302912e-29!GO:0043232;intracellular non-membrane-bound organelle;8.42185774302912e-29!GO:0046907;intracellular transport;2.17517471683209e-28!GO:0005743;mitochondrial inner membrane;2.34599666573671e-28!GO:0005694;chromosome;1.06434392911614e-27!GO:0006886;intracellular protein transport;3.55581199160304e-26!GO:0044427;chromosomal part;1.67363228031053e-25!GO:0006974;response to DNA damage stimulus;1.82052426514686e-25!GO:0051276;chromosome organization and biogenesis;4.01182294393735e-25!GO:0007049;cell cycle;5.75160138901291e-25!GO:0000166;nucleotide binding;1.24953239194413e-24!GO:0015935;small ribosomal subunit;3.45529977326764e-24!GO:0044451;nucleoplasm part;4.22303608287794e-24!GO:0006119;oxidative phosphorylation;6.45024745709476e-23!GO:0044455;mitochondrial membrane part;2.05768616809229e-22!GO:0031980;mitochondrial lumen;2.46053419032714e-22!GO:0005759;mitochondrial matrix;2.46053419032714e-22!GO:0006281;DNA repair;6.02603856595853e-22!GO:0006325;establishment and/or maintenance of chromatin architecture;7.33511012965067e-22!GO:0015934;large ribosomal subunit;9.66917519986402e-22!GO:0006323;DNA packaging;4.80722790545661e-21!GO:0022618;protein-RNA complex assembly;6.54444435560095e-21!GO:0051649;establishment of cellular localization;6.86075034576735e-21!GO:0005730;nucleolus;1.58077773088069e-20!GO:0051641;cellular localization;2.3518042823214e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.0228407091968e-19!GO:0044265;cellular macromolecule catabolic process;2.2161941458719e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.69555128877992e-19!GO:0016462;pyrophosphatase activity;2.79796499647536e-19!GO:0022402;cell cycle process;3.16487579677753e-19!GO:0006457;protein folding;1.67279283130749e-18!GO:0017111;nucleoside-triphosphatase activity;2.04423062878839e-18!GO:0005746;mitochondrial respiratory chain;2.07005612492617e-18!GO:0019941;modification-dependent protein catabolic process;3.90803097568878e-18!GO:0043632;modification-dependent macromolecule catabolic process;3.90803097568878e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.94691808512878e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;5.04925062021496e-18!GO:0016874;ligase activity;6.83591477342499e-18!GO:0006260;DNA replication;6.8595562278299e-18!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.08385660049026e-17!GO:0006512;ubiquitin cycle;1.1000501022298e-17!GO:0044257;cellular protein catabolic process;1.55671014508676e-17!GO:0008134;transcription factor binding;1.60143516421153e-17!GO:0043285;biopolymer catabolic process;2.10721160761267e-17!GO:0000502;proteasome complex (sensu Eukaryota);9.28773726639733e-17!GO:0032553;ribonucleotide binding;2.1401985041038e-16!GO:0032555;purine ribonucleotide binding;2.1401985041038e-16!GO:0009719;response to endogenous stimulus;2.63654387325887e-16!GO:0005761;mitochondrial ribosome;2.98474524508487e-16!GO:0000313;organellar ribosome;2.98474524508487e-16!GO:0044248;cellular catabolic process;3.07916434796733e-16!GO:0050136;NADH dehydrogenase (quinone) activity;3.40112452779822e-16!GO:0003954;NADH dehydrogenase activity;3.40112452779822e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.40112452779822e-16!GO:0000785;chromatin;4.13548746738482e-16!GO:0065004;protein-DNA complex assembly;4.17147908327423e-16!GO:0006333;chromatin assembly or disassembly;5.52301437408699e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.69342144933743e-16!GO:0017076;purine nucleotide binding;1.60781505718456e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.79485791037142e-15!GO:0043412;biopolymer modification;2.21374937632262e-15!GO:0009057;macromolecule catabolic process;2.40516514888575e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;2.57666439786923e-15!GO:0000375;RNA splicing, via transesterification reactions;2.57666439786923e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.57666439786923e-15!GO:0008135;translation factor activity, nucleic acid binding;2.86451448112909e-15!GO:0042623;ATPase activity, coupled;2.89243553082123e-15!GO:0005524;ATP binding;2.96622549767618e-15!GO:0006605;protein targeting;4.05371044276804e-15!GO:0016604;nuclear body;4.39845419329041e-15!GO:0016887;ATPase activity;4.95768495034387e-15!GO:0032559;adenyl ribonucleotide binding;6.50442986336305e-15!GO:0000278;mitotic cell cycle;6.68001594961838e-15!GO:0048770;pigment granule;8.48777733181904e-15!GO:0042470;melanosome;8.48777733181904e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.48921400017835e-14!GO:0042773;ATP synthesis coupled electron transport;1.48921400017835e-14!GO:0042254;ribosome biogenesis and assembly;1.89329322203637e-14!GO:0006915;apoptosis;2.41464907043794e-14!GO:0012501;programmed cell death;3.01219513036975e-14!GO:0030964;NADH dehydrogenase complex (quinone);3.55361806859132e-14!GO:0045271;respiratory chain complex I;3.55361806859132e-14!GO:0005747;mitochondrial respiratory chain complex I;3.55361806859132e-14!GO:0030554;adenyl nucleotide binding;7.90061433418138e-14!GO:0044453;nuclear membrane part;8.00667853570867e-14!GO:0030163;protein catabolic process;9.24433125897284e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.19181215407261e-13!GO:0012505;endomembrane system;2.09207954283092e-13!GO:0006413;translational initiation;2.12192165547241e-13!GO:0031965;nuclear membrane;2.14163453708936e-13!GO:0006334;nucleosome assembly;3.21640728497229e-13!GO:0050794;regulation of cellular process;3.31029599877942e-13!GO:0022403;cell cycle phase;5.73855859906605e-13!GO:0003743;translation initiation factor activity;5.80732138670975e-13!GO:0008219;cell death;5.84560370369908e-13!GO:0016265;death;5.84560370369908e-13!GO:0019222;regulation of metabolic process;6.72530041796905e-13!GO:0004386;helicase activity;7.9435515624557e-13!GO:0006464;protein modification process;9.69885614663466e-13!GO:0005635;nuclear envelope;1.10714975538947e-12!GO:0051186;cofactor metabolic process;1.26001556571205e-12!GO:0031497;chromatin assembly;1.5648450855101e-12!GO:0051082;unfolded protein binding;1.8259491668314e-12!GO:0016568;chromatin modification;3.00617766278197e-12!GO:0006913;nucleocytoplasmic transport;4.50360625233051e-12!GO:0016607;nuclear speck;5.51968858477783e-12!GO:0006403;RNA localization;6.33772313547662e-12!GO:0050657;nucleic acid transport;7.19547795118297e-12!GO:0051236;establishment of RNA localization;7.19547795118297e-12!GO:0050658;RNA transport;7.19547795118297e-12!GO:0051169;nuclear transport;1.0230469806779e-11!GO:0006446;regulation of translational initiation;1.1039065410363e-11!GO:0005643;nuclear pore;1.35536421808536e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.37725676303606e-11!GO:0003712;transcription cofactor activity;2.03703175806493e-11!GO:0051726;regulation of cell cycle;2.17833546910369e-11!GO:0000074;regulation of progression through cell cycle;4.50681716324033e-11!GO:0009259;ribonucleotide metabolic process;5.30756566614229e-11!GO:0006164;purine nucleotide biosynthetic process;6.13151484142158e-11!GO:0000087;M phase of mitotic cell cycle;7.12164013966044e-11!GO:0051301;cell division;7.44852465304357e-11!GO:0006163;purine nucleotide metabolic process;8.20063467721733e-11!GO:0065002;intracellular protein transport across a membrane;8.22585374181244e-11!GO:0009260;ribonucleotide biosynthetic process;8.73196730492845e-11!GO:0044432;endoplasmic reticulum part;9.53745548438741e-11!GO:0008026;ATP-dependent helicase activity;1.06407431965325e-10!GO:0043687;post-translational protein modification;1.06407431965325e-10!GO:0031323;regulation of cellular metabolic process;1.07580768162526e-10!GO:0006364;rRNA processing;1.51577150613334e-10!GO:0007067;mitosis;1.623308025108e-10!GO:0006732;coenzyme metabolic process;1.94491984811289e-10!GO:0016072;rRNA metabolic process;2.11811458973089e-10!GO:0000279;M phase;2.40906499078674e-10!GO:0043566;structure-specific DNA binding;2.86688475512217e-10!GO:0005783;endoplasmic reticulum;2.93502475452391e-10!GO:0051028;mRNA transport;4.1525870943805e-10!GO:0009152;purine ribonucleotide biosynthetic process;5.63433957988905e-10!GO:0006399;tRNA metabolic process;5.71911479566669e-10!GO:0009150;purine ribonucleotide metabolic process;7.51212204662521e-10!GO:0003697;single-stranded DNA binding;8.63358597384027e-10!GO:0048193;Golgi vesicle transport;1.1624051458318e-09!GO:0006350;transcription;1.25572620163854e-09!GO:0017038;protein import;1.52918783872714e-09!GO:0006366;transcription from RNA polymerase II promoter;1.71750959003924e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.0371812536678e-09!GO:0046930;pore complex;2.07024754813432e-09!GO:0019829;cation-transporting ATPase activity;2.52687257823616e-09!GO:0006261;DNA-dependent DNA replication;2.55103614628296e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.79554364722698e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.66434123256042e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.21248327176208e-09!GO:0005839;proteasome core complex (sensu Eukaryota);4.7128020121275e-09!GO:0042981;regulation of apoptosis;5.03237263e-09!GO:0010468;regulation of gene expression;5.46713258962362e-09!GO:0009060;aerobic respiration;5.89450740367742e-09!GO:0009056;catabolic process;5.95316709704967e-09!GO:0050789;regulation of biological process;6.89843382667342e-09!GO:0008639;small protein conjugating enzyme activity;7.63559109721879e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.71370561881468e-09!GO:0016779;nucleotidyltransferase activity;7.78991897522153e-09!GO:0016787;hydrolase activity;8.77063807519004e-09!GO:0043067;regulation of programmed cell death;9.09262155759871e-09!GO:0016192;vesicle-mediated transport;1.17354406577256e-08!GO:0004842;ubiquitin-protein ligase activity;1.40458481668748e-08!GO:0003713;transcription coactivator activity;1.71494688769091e-08!GO:0009055;electron carrier activity;2.04674985206858e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.65985747580475e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.80811143284284e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.95422625215451e-08!GO:0004298;threonine endopeptidase activity;3.65429336099676e-08!GO:0008565;protein transporter activity;3.84098233637529e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.65316506943146e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.65316506943146e-08!GO:0051188;cofactor biosynthetic process;5.13858666387096e-08!GO:0005789;endoplasmic reticulum membrane;5.16627407679946e-08!GO:0045333;cellular respiration;5.37562033196178e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.54282605256745e-08!GO:0003677;DNA binding;7.04988211276449e-08!GO:0015986;ATP synthesis coupled proton transport;7.25726041507613e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.25726041507613e-08!GO:0015078;hydrogen ion transmembrane transporter activity;8.00229511120673e-08!GO:0019787;small conjugating protein ligase activity;9.18673494899873e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.92790213609216e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.92790213609216e-08!GO:0051246;regulation of protein metabolic process;1.04515696507392e-07!GO:0005793;ER-Golgi intermediate compartment;1.10453676838127e-07!GO:0000786;nucleosome;1.13917148921093e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.22813998710354e-07!GO:0009117;nucleotide metabolic process;1.24539058265579e-07!GO:0009141;nucleoside triphosphate metabolic process;1.3253732800168e-07!GO:0005794;Golgi apparatus;1.38602198992958e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.52107393713765e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.52107393713765e-07!GO:0006793;phosphorus metabolic process;2.8771222899749e-07!GO:0006796;phosphate metabolic process;2.8771222899749e-07!GO:0016740;transferase activity;2.96915901916562e-07!GO:0006461;protein complex assembly;3.03106302860514e-07!GO:0032774;RNA biosynthetic process;3.28723381065969e-07!GO:0043069;negative regulation of programmed cell death;3.31019190451044e-07!GO:0006916;anti-apoptosis;3.70939935170664e-07!GO:0043066;negative regulation of apoptosis;4.06298493299156e-07!GO:0006351;transcription, DNA-dependent;4.57313162092556e-07!GO:0045259;proton-transporting ATP synthase complex;4.68394636924679e-07!GO:0016563;transcription activator activity;4.91161090814249e-07!GO:0005657;replication fork;4.97347450985907e-07!GO:0000245;spliceosome assembly;6.06417308151416e-07!GO:0016881;acid-amino acid ligase activity;7.28926410401227e-07!GO:0048523;negative regulation of cellular process;7.31636614572867e-07!GO:0007005;mitochondrion organization and biogenesis;8.47249276826644e-07!GO:0006754;ATP biosynthetic process;8.47404560695135e-07!GO:0006753;nucleoside phosphate metabolic process;8.47404560695135e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.81093409722727e-07!GO:0051170;nuclear import;1.16603221895058e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.17815273077204e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.17815273077204e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.17815273077204e-06!GO:0032446;protein modification by small protein conjugation;1.32605686703279e-06!GO:0045449;regulation of transcription;1.57206960365152e-06!GO:0006099;tricarboxylic acid cycle;1.58438604831444e-06!GO:0046356;acetyl-CoA catabolic process;1.58438604831444e-06!GO:0006401;RNA catabolic process;1.75427752283401e-06!GO:0016567;protein ubiquitination;1.83748263703201e-06!GO:0009108;coenzyme biosynthetic process;1.84386632574476e-06!GO:0016310;phosphorylation;1.87976145807941e-06!GO:0046034;ATP metabolic process;2.67064142707931e-06!GO:0043038;amino acid activation;2.68392597728672e-06!GO:0006418;tRNA aminoacylation for protein translation;2.68392597728672e-06!GO:0043039;tRNA aminoacylation;2.68392597728672e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.73671512710592e-06!GO:0008094;DNA-dependent ATPase activity;2.92372628066228e-06!GO:0006606;protein import into nucleus;3.04246202666067e-06!GO:0006084;acetyl-CoA metabolic process;3.78653750175862e-06!GO:0006950;response to stress;4.23280361691797e-06!GO:0000775;chromosome, pericentric region;4.4171184378404e-06!GO:0003690;double-stranded DNA binding;4.51445381456551e-06!GO:0006310;DNA recombination;4.81637622385309e-06!GO:0005762;mitochondrial large ribosomal subunit;8.1496157598883e-06!GO:0000315;organellar large ribosomal subunit;8.1496157598883e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.57313201129054e-06!GO:0005768;endosome;9.84627413547663e-06!GO:0006613;cotranslational protein targeting to membrane;9.85143447583921e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.06696347493687e-05!GO:0051325;interphase;1.08603030905435e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.18140126495896e-05!GO:0005813;centrosome;1.18140126495896e-05!GO:0043623;cellular protein complex assembly;1.22947002509971e-05!GO:0006752;group transfer coenzyme metabolic process;1.31510687971405e-05!GO:0008654;phospholipid biosynthetic process;1.31510687971405e-05!GO:0051329;interphase of mitotic cell cycle;1.31723656173708e-05!GO:0000314;organellar small ribosomal subunit;1.33311417866551e-05!GO:0005763;mitochondrial small ribosomal subunit;1.33311417866551e-05!GO:0009109;coenzyme catabolic process;1.55834837888051e-05!GO:0016564;transcription repressor activity;1.64133890580539e-05!GO:0005773;vacuole;1.72821755089313e-05!GO:0048519;negative regulation of biological process;1.87252570446597e-05!GO:0005815;microtubule organizing center;1.99857774059098e-05!GO:0009165;nucleotide biosynthetic process;2.01108001821507e-05!GO:0003724;RNA helicase activity;2.30089117023399e-05!GO:0000323;lytic vacuole;2.30994528504661e-05!GO:0005764;lysosome;2.30994528504661e-05!GO:0065007;biological regulation;2.39311305889319e-05!GO:0051168;nuclear export;2.45755522893569e-05!GO:0005770;late endosome;2.53363776044671e-05!GO:0031324;negative regulation of cellular metabolic process;2.63822889537522e-05!GO:0016363;nuclear matrix;2.69243776610439e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.77137971391036e-05!GO:0003899;DNA-directed RNA polymerase activity;2.90507698910932e-05!GO:0000151;ubiquitin ligase complex;3.0401466974294e-05!GO:0004518;nuclease activity;3.64283883557004e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.71378533159614e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.78264449236331e-05!GO:0019843;rRNA binding;4.25652458163516e-05!GO:0045786;negative regulation of progression through cell cycle;4.30226048684795e-05!GO:0006302;double-strand break repair;4.44057866454182e-05!GO:0006355;regulation of transcription, DNA-dependent;4.76900643390418e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.95425568155822e-05!GO:0008168;methyltransferase activity;5.10106094556185e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;5.20507943293581e-05!GO:0005667;transcription factor complex;6.10029122137927e-05!GO:0003729;mRNA binding;6.22148075817725e-05!GO:0051187;cofactor catabolic process;6.31703861989319e-05!GO:0051427;hormone receptor binding;7.30049317545585e-05!GO:0003684;damaged DNA binding;8.12940572656812e-05!GO:0043021;ribonucleoprotein binding;8.42528968493044e-05!GO:0016481;negative regulation of transcription;9.6299427336059e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000102054467091198!GO:0015399;primary active transmembrane transporter activity;0.000102054467091198!GO:0000075;cell cycle checkpoint;0.000104972068802117!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000135374440161753!GO:0043681;protein import into mitochondrion;0.000143455069064158!GO:0015630;microtubule cytoskeleton;0.00014380988401873!GO:0031072;heat shock protein binding;0.000146361132155881!GO:0035257;nuclear hormone receptor binding;0.000147794487229471!GO:0006417;regulation of translation;0.00015798084751512!GO:0006612;protein targeting to membrane;0.000164233963874443!GO:0005819;spindle;0.000166506935164444!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000171157426803475!GO:0003682;chromatin binding;0.00017156921081156!GO:0006402;mRNA catabolic process;0.000175557896283292!GO:0007243;protein kinase cascade;0.000196569637144455!GO:0030120;vesicle coat;0.000217564920120613!GO:0030662;coated vesicle membrane;0.000217564920120613!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000224810807188521!GO:0008033;tRNA processing;0.000231567075996813!GO:0003678;DNA helicase activity;0.000232102140081605!GO:0048475;coated membrane;0.000261670386515343!GO:0030117;membrane coat;0.000261670386515343!GO:0009892;negative regulation of metabolic process;0.000287357180954286!GO:0006352;transcription initiation;0.000290855699487437!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000303228124009054!GO:0046474;glycerophospholipid biosynthetic process;0.000307024237223446!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00032528707539378!GO:0065009;regulation of a molecular function;0.000373934427044321!GO:0045454;cell redox homeostasis;0.000378209814143963!GO:0008186;RNA-dependent ATPase activity;0.000380125870358351!GO:0005885;Arp2/3 protein complex;0.000388723921818166!GO:0005788;endoplasmic reticulum lumen;0.000433584569811515!GO:0032508;DNA duplex unwinding;0.000442132392822016!GO:0032392;DNA geometric change;0.000442132392822016!GO:0000228;nuclear chromosome;0.000446400631559388!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000461339119043329!GO:0000776;kinetochore;0.000469120455205159!GO:0005637;nuclear inner membrane;0.000488493041030526!GO:0003714;transcription corepressor activity;0.000517949205408364!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000520731372281315!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00052535073386845!GO:0044452;nucleolar part;0.00052909147712499!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000548059610938891!GO:0051052;regulation of DNA metabolic process;0.000573400093702696!GO:0019899;enzyme binding;0.000583634042167904!GO:0007006;mitochondrial membrane organization and biogenesis;0.00059611661448125!GO:0004527;exonuclease activity;0.00060631873589725!GO:0016859;cis-trans isomerase activity;0.000607551658199744!GO:0006626;protein targeting to mitochondrion;0.000639904451874572!GO:0016853;isomerase activity;0.000687351868205656!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000706220653771426!GO:0046489;phosphoinositide biosynthetic process;0.000729002009590395!GO:0016491;oxidoreductase activity;0.000732328525368936!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00078855625427489!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00078855625427489!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00078855625427489!GO:0006414;translational elongation;0.000858572288868118!GO:0031982;vesicle;0.000937307720370621!GO:0005525;GTP binding;0.000943826860432508!GO:0030384;phosphoinositide metabolic process;0.000964169677579059!GO:0004004;ATP-dependent RNA helicase activity;0.00109523000965631!GO:0044454;nuclear chromosome part;0.00110170662537264!GO:0051920;peroxiredoxin activity;0.00110883414271208!GO:0006338;chromatin remodeling;0.00111433175465604!GO:0006268;DNA unwinding during replication;0.00115450722353802!GO:0044440;endosomal part;0.00120151720931649!GO:0010008;endosome membrane;0.00120151720931649!GO:0043492;ATPase activity, coupled to movement of substances;0.00121222304308514!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00124359903584694!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00124359903584694!GO:0005684;U2-dependent spliceosome;0.00135743576818378!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00137017327409915!GO:0008270;zinc ion binding;0.00137663529590078!GO:0031326;regulation of cellular biosynthetic process;0.00138748722174741!GO:0006650;glycerophospholipid metabolic process;0.00145810490036572!GO:0006405;RNA export from nucleus;0.0014663340087926!GO:0031988;membrane-bound vesicle;0.00153649414569417!GO:0003924;GTPase activity;0.00160223465043599!GO:0031968;organelle outer membrane;0.00167650388728177!GO:0006839;mitochondrial transport;0.00167650388728177!GO:0006383;transcription from RNA polymerase III promoter;0.00168677722102792!GO:0015992;proton transport;0.00169470756991733!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0017197224712156!GO:0008234;cysteine-type peptidase activity;0.00177580813308249!GO:0019867;outer membrane;0.0018241406194211!GO:0007051;spindle organization and biogenesis;0.00183173676549966!GO:0005741;mitochondrial outer membrane;0.00184111406873493!GO:0006818;hydrogen transport;0.00184899385421654!GO:0043414;biopolymer methylation;0.00190359802483148!GO:0015631;tubulin binding;0.00190518624408489!GO:0051087;chaperone binding;0.00190610785311915!GO:0051789;response to protein stimulus;0.001918207394659!GO:0006986;response to unfolded protein;0.001918207394659!GO:0006091;generation of precursor metabolites and energy;0.00201640767552451!GO:0022890;inorganic cation transmembrane transporter activity;0.00204069138360365!GO:0009112;nucleobase metabolic process;0.00215180502159788!GO:0009124;nucleoside monophosphate biosynthetic process;0.00220538780111031!GO:0009123;nucleoside monophosphate metabolic process;0.00220538780111031!GO:0031410;cytoplasmic vesicle;0.00234537655517343!GO:0009116;nucleoside metabolic process;0.00237698254838337!GO:0008632;apoptotic program;0.00241887398634665!GO:0051252;regulation of RNA metabolic process;0.00243852125085944!GO:0015980;energy derivation by oxidation of organic compounds;0.00253649243908218!GO:0006284;base-excision repair;0.00258734598221267!GO:0006611;protein export from nucleus;0.0026849534497534!GO:0005798;Golgi-associated vesicle;0.00283156842422086!GO:0046467;membrane lipid biosynthetic process;0.0028635341537835!GO:0007059;chromosome segregation;0.00290208688219401!GO:0016251;general RNA polymerase II transcription factor activity;0.00304140236511306!GO:0016023;cytoplasmic membrane-bound vesicle;0.00320290128855725!GO:0032561;guanyl ribonucleotide binding;0.00320290128855725!GO:0019001;guanyl nucleotide binding;0.00320290128855725!GO:0033116;ER-Golgi intermediate compartment membrane;0.00326476589092025!GO:0030880;RNA polymerase complex;0.00326476589092025!GO:0043488;regulation of mRNA stability;0.00329107781726248!GO:0043487;regulation of RNA stability;0.00329107781726248!GO:0043596;nuclear replication fork;0.00336833277294996!GO:0008312;7S RNA binding;0.00341076825194975!GO:0048500;signal recognition particle;0.00347776589758171!GO:0004576;oligosaccharyl transferase activity;0.003726996246113!GO:0046483;heterocycle metabolic process;0.00380871157296688!GO:0042802;identical protein binding;0.00384805250485726!GO:0009889;regulation of biosynthetic process;0.00388535176057704!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00403759177325902!GO:0046914;transition metal ion binding;0.00408539273605269!GO:0003887;DNA-directed DNA polymerase activity;0.00417012401320935!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00420172725258947!GO:0006275;regulation of DNA replication;0.00430918652089571!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00434094058542767!GO:0015002;heme-copper terminal oxidase activity;0.00434094058542767!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00434094058542767!GO:0004129;cytochrome-c oxidase activity;0.00434094058542767!GO:0030867;rough endoplasmic reticulum membrane;0.00440949246048598!GO:0006506;GPI anchor biosynthetic process;0.00443640608435478!GO:0005769;early endosome;0.00447517988097803!GO:0000178;exosome (RNase complex);0.00451553573788256!GO:0048471;perinuclear region of cytoplasm;0.00454253792010747!GO:0044431;Golgi apparatus part;0.00455347368869309!GO:0006220;pyrimidine nucleotide metabolic process;0.00455347368869309!GO:0047485;protein N-terminus binding;0.00455802397784948!GO:0004540;ribonuclease activity;0.00496806707293822!GO:0032259;methylation;0.00503515297083983!GO:0009161;ribonucleoside monophosphate metabolic process;0.0050605677175104!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0050605677175104!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00512455083249633!GO:0045047;protein targeting to ER;0.00512455083249633!GO:0000059;protein import into nucleus, docking;0.00525281106776001!GO:0046966;thyroid hormone receptor binding;0.00539124243727532!GO:0005048;signal sequence binding;0.00589580754750657!GO:0008250;oligosaccharyl transferase complex;0.00603923549505363!GO:0003711;transcription elongation regulator activity;0.00627990976543445!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00628031201905633!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00637737702727871!GO:0016197;endosome transport;0.00638330886011977!GO:0042393;histone binding;0.00639839857096378!GO:0007021;tubulin folding;0.00675953061525344!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00675953061525344!GO:0000428;DNA-directed RNA polymerase complex;0.00675953061525344!GO:0006144;purine base metabolic process;0.00677612206023617!GO:0006595;polyamine metabolic process;0.00693481728418945!GO:0043022;ribosome binding;0.00713784593574636!GO:0003725;double-stranded RNA binding;0.00715555514244551!GO:0000287;magnesium ion binding;0.00716437103315278!GO:0006289;nucleotide-excision repair;0.00717520981149228!GO:0016272;prefoldin complex;0.00720463617847021!GO:0006505;GPI anchor metabolic process;0.00728239446026876!GO:0006270;DNA replication initiation;0.00730047993403792!GO:0031902;late endosome membrane;0.00748243477808263!GO:0004674;protein serine/threonine kinase activity;0.00752594148567843!GO:0006497;protein amino acid lipidation;0.00761072542249514!GO:0007088;regulation of mitosis;0.00787202330481558!GO:0016408;C-acyltransferase activity;0.00797962681948029!GO:0008408;3'-5' exonuclease activity;0.00801585729091703!GO:0006891;intra-Golgi vesicle-mediated transport;0.00804098362445308!GO:0051539;4 iron, 4 sulfur cluster binding;0.00814204542293816!GO:0000118;histone deacetylase complex;0.00814204542293816!GO:0009615;response to virus;0.00840495620891808!GO:0018193;peptidyl-amino acid modification;0.00842568748418013!GO:0043065;positive regulation of apoptosis;0.00842671012936154!GO:0016584;nucleosome positioning;0.00849953227781306!GO:0005758;mitochondrial intermembrane space;0.00864616454814509!GO:0004532;exoribonuclease activity;0.00864616454814509!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00864616454814509!GO:0051287;NAD binding;0.00899374939994725!GO:0008139;nuclear localization sequence binding;0.00907687419157758!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00908762951264428!GO:0031570;DNA integrity checkpoint;0.00913306504395049!GO:0051540;metal cluster binding;0.0093566614453475!GO:0051536;iron-sulfur cluster binding;0.0093566614453475!GO:0007050;cell cycle arrest;0.00951394280602889!GO:0040029;regulation of gene expression, epigenetic;0.00985494497614098!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0100091081881951!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0103908810573165!GO:0008276;protein methyltransferase activity;0.0104152783893432!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0106833646624495!GO:0046983;protein dimerization activity;0.0109322139053193!GO:0032984;macromolecular complex disassembly;0.0110750669999395!GO:0005869;dynactin complex;0.0111611230988899!GO:0043068;positive regulation of programmed cell death;0.0113026100876592!GO:0006376;mRNA splice site selection;0.0113052287812527!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0113052287812527!GO:0032200;telomere organization and biogenesis;0.0114277474508982!GO:0000723;telomere maintenance;0.0114277474508982!GO:0030521;androgen receptor signaling pathway;0.011704913949721!GO:0008180;signalosome;0.0117913002537419!GO:0006367;transcription initiation from RNA polymerase II promoter;0.011795037474385!GO:0000922;spindle pole;0.0118126792692066!GO:0050790;regulation of catalytic activity;0.0118126792692066!GO:0045045;secretory pathway;0.0118753053415059!GO:0007093;mitotic cell cycle checkpoint;0.0119892277044893!GO:0046128;purine ribonucleoside metabolic process;0.0121380114732778!GO:0042278;purine nucleoside metabolic process;0.0121380114732778!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0122321260680425!GO:0008097;5S rRNA binding;0.0122369798666353!GO:0048522;positive regulation of cellular process;0.0123541680040097!GO:0030518;steroid hormone receptor signaling pathway;0.0129588778497572!GO:0018196;peptidyl-asparagine modification;0.012964677946572!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.012964677946572!GO:0006672;ceramide metabolic process;0.012964677946572!GO:0005832;chaperonin-containing T-complex;0.0133818557800188!GO:0030041;actin filament polymerization;0.0134119427394442!GO:0031124;mRNA 3'-end processing;0.0134119427394442!GO:0045947;negative regulation of translational initiation;0.0135383020318062!GO:0043601;nuclear replisome;0.0136796487306465!GO:0030894;replisome;0.0136796487306465!GO:0045892;negative regulation of transcription, DNA-dependent;0.0139390361436006!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0141047449290024!GO:0009451;RNA modification;0.0141047449290024!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0143296985681032!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0143296985681032!GO:0009126;purine nucleoside monophosphate metabolic process;0.0143296985681032!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0143296985681032!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0143296985681032!GO:0010257;NADH dehydrogenase complex assembly;0.0143296985681032!GO:0033108;mitochondrial respiratory chain complex assembly;0.0143296985681032!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0144908963560743!GO:0006917;induction of apoptosis;0.0146171566933817!GO:0007052;mitotic spindle organization and biogenesis;0.0146401918154195!GO:0000082;G1/S transition of mitotic cell cycle;0.0147048268893145!GO:0000049;tRNA binding;0.0149893966639921!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0152072527829048!GO:0048487;beta-tubulin binding;0.0154590431468122!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0159359355583582!GO:0000096;sulfur amino acid metabolic process;0.0162296609308547!GO:0005669;transcription factor TFIID complex;0.0162419644625823!GO:0019752;carboxylic acid metabolic process;0.0162682332963956!GO:0030663;COPI coated vesicle membrane;0.0166372979897477!GO:0030126;COPI vesicle coat;0.0166372979897477!GO:0016585;chromatin remodeling complex;0.0166413900323687!GO:0006082;organic acid metabolic process;0.0172235344238897!GO:0030433;ER-associated protein catabolic process;0.017532132751252!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.017532132751252!GO:0022411;cellular component disassembly;0.0181167350448441!GO:0006643;membrane lipid metabolic process;0.0184972112578339!GO:0012502;induction of programmed cell death;0.0189242716384549!GO:0022415;viral reproductive process;0.0189812433030254!GO:0004003;ATP-dependent DNA helicase activity;0.0191986001177344!GO:0030176;integral to endoplasmic reticulum membrane;0.019976954061563!GO:0005774;vacuolar membrane;0.0202051709444147!GO:0043241;protein complex disassembly;0.0212737198059526!GO:0042158;lipoprotein biosynthetic process;0.0217377406326565!GO:0007242;intracellular signaling cascade;0.0217377406326565!GO:0051098;regulation of binding;0.0217377406326565!GO:0033367;protein localization in mast cell secretory granule;0.0217377406326565!GO:0033365;protein localization in organelle;0.0217377406326565!GO:0033371;T cell secretory granule organization and biogenesis;0.0217377406326565!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0217377406326565!GO:0033375;protease localization in T cell secretory granule;0.0217377406326565!GO:0042629;mast cell granule;0.0217377406326565!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0217377406326565!GO:0033364;mast cell secretory granule organization and biogenesis;0.0217377406326565!GO:0033380;granzyme B localization in T cell secretory granule;0.0217377406326565!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0217377406326565!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0217377406326565!GO:0033368;protease localization in mast cell secretory granule;0.0217377406326565!GO:0033366;protein localization in secretory granule;0.0217377406326565!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0217377406326565!GO:0033374;protein localization in T cell secretory granule;0.0217377406326565!GO:0000792;heterochromatin;0.021913725720773!GO:0005663;DNA replication factor C complex;0.0219869514107317!GO:0006301;postreplication repair;0.0220085653355346!GO:0007034;vacuolar transport;0.0220085653355346!GO:0035258;steroid hormone receptor binding;0.0221944425074769!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0224087451878093!GO:0000726;non-recombinational repair;0.0224508811576417!GO:0051053;negative regulation of DNA metabolic process;0.0226705829735313!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0227946588296067!GO:0031625;ubiquitin protein ligase binding;0.0234801784800151!GO:0009081;branched chain family amino acid metabolic process;0.0234858710865614!GO:0003746;translation elongation factor activity;0.0235962809793204!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0239389175056908!GO:0008022;protein C-terminus binding;0.0244267945497068!GO:0032940;secretion by cell;0.0245863478095373!GO:0009119;ribonucleoside metabolic process;0.0246094954903881!GO:0007040;lysosome organization and biogenesis;0.024624025194573!GO:0019783;small conjugating protein-specific protease activity;0.0246709083889917!GO:0031252;leading edge;0.0248540107986936!GO:0000077;DNA damage checkpoint;0.0250652281764954!GO:0006607;NLS-bearing substrate import into nucleus;0.0253690023839797!GO:0015036;disulfide oxidoreductase activity;0.0258830097832286!GO:0030137;COPI-coated vesicle;0.0265590264467027!GO:0043284;biopolymer biosynthetic process;0.026575675570409!GO:0004197;cysteine-type endopeptidase activity;0.02681509872418!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.02681509872418!GO:0043130;ubiquitin binding;0.0274298423711729!GO:0032182;small conjugating protein binding;0.0274298423711729!GO:0046519;sphingoid metabolic process;0.0280295686206224!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0281990900870392!GO:0000139;Golgi membrane;0.0282390688558523!GO:0000339;RNA cap binding;0.028255260006369!GO:0009967;positive regulation of signal transduction;0.028255260006369!GO:0009303;rRNA transcription;0.0283670770281237!GO:0019206;nucleoside kinase activity;0.028648964174452!GO:0051059;NF-kappaB binding;0.028648964174452!GO:0000790;nuclear chromatin;0.0287788474361774!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0293076334749906!GO:0006520;amino acid metabolic process;0.0295227953427417!GO:0006984;ER-nuclear signaling pathway;0.0307358116872821!GO:0008538;proteasome activator activity;0.0307688091656583!GO:0019377;glycolipid catabolic process;0.0310557019455085!GO:0030134;ER to Golgi transport vesicle;0.0325061645321106!GO:0046822;regulation of nucleocytoplasmic transport;0.0325503667284673!GO:0030658;transport vesicle membrane;0.0325936422080639!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0327194040427627!GO:0004843;ubiquitin-specific protease activity;0.0327437003917844!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0328057115819205!GO:0004300;enoyl-CoA hydratase activity;0.0338542282082835!GO:0032404;mismatch repair complex binding;0.0344529910212507!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0344563280560129!GO:0005784;translocon complex;0.0354607578569163!GO:0042770;DNA damage response, signal transduction;0.0358248461813674!GO:0006979;response to oxidative stress;0.0358248461813674!GO:0046479;glycosphingolipid catabolic process;0.0358789998418858!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.036459444108411!GO:0015923;mannosidase activity;0.0367524125406638!GO:0008637;apoptotic mitochondrial changes;0.0367718225241471!GO:0046112;nucleobase biosynthetic process;0.0367718225241471!GO:0006740;NADPH regeneration;0.0372681420207043!GO:0006098;pentose-phosphate shunt;0.0372681420207043!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0372925928671743!GO:0045039;protein import into mitochondrial inner membrane;0.0372925928671743!GO:0000725;recombinational repair;0.0372925928671743!GO:0000724;double-strand break repair via homologous recombination;0.0372925928671743!GO:0008536;Ran GTPase binding;0.0374544433833165!GO:0000209;protein polyubiquitination;0.0374544433833165!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0374544433833165!GO:0000303;response to superoxide;0.0374544433833165!GO:0006730;one-carbon compound metabolic process;0.0374544433833165!GO:0019079;viral genome replication;0.0374544433833165!GO:0043624;cellular protein complex disassembly;0.0374544433833165!GO:0035267;NuA4 histone acetyltransferase complex;0.0375648102889506!GO:0004221;ubiquitin thiolesterase activity;0.0379055391499431!GO:0030522;intracellular receptor-mediated signaling pathway;0.0388402096296025!GO:0031123;RNA 3'-end processing;0.0389777748343364!GO:0051320;S phase;0.0394905648576454!GO:0016605;PML body;0.0397380592264932!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0399665115275679!GO:0000175;3'-5'-exoribonuclease activity;0.0403800419003825!GO:0031970;organelle envelope lumen;0.0406733878275741!GO:0044437;vacuolar part;0.0409155658907573!GO:0008017;microtubule binding;0.0409155658907573!GO:0044438;microbody part;0.0409155658907573!GO:0044439;peroxisomal part;0.0409155658907573!GO:0045815;positive regulation of gene expression, epigenetic;0.0411513732308387!GO:0016790;thiolester hydrolase activity;0.0415531238881147!GO:0016279;protein-lysine N-methyltransferase activity;0.0419266138921038!GO:0018024;histone-lysine N-methyltransferase activity;0.0419266138921038!GO:0016278;lysine N-methyltransferase activity;0.0419266138921038!GO:0005765;lysosomal membrane;0.0420394431570974!GO:0008320;protein transmembrane transporter activity;0.044092755007846!GO:0000781;chromosome, telomeric region;0.0445253238538259!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0454644204423137!GO:0030127;COPII vesicle coat;0.0456537897893715!GO:0012507;ER to Golgi transport vesicle membrane;0.0456537897893715!GO:0006516;glycoprotein catabolic process;0.0460134477241651!GO:0008047;enzyme activator activity;0.0462050282432925!GO:0006779;porphyrin biosynthetic process;0.0465805108076566!GO:0033014;tetrapyrrole biosynthetic process;0.0465805108076566!GO:0051235;maintenance of localization;0.0469480882940089!GO:0005791;rough endoplasmic reticulum;0.0473206816523525!GO:0019238;cyclohydrolase activity;0.0473403696239312!GO:0008213;protein amino acid alkylation;0.0473880664666607!GO:0006479;protein amino acid methylation;0.0473880664666607!GO:0006360;transcription from RNA polymerase I promoter;0.0476013565454953!GO:0000123;histone acetyltransferase complex;0.0477083951266827!GO:0048146;positive regulation of fibroblast proliferation;0.0477083951266827!GO:0008173;RNA methyltransferase activity;0.0477083951266827!GO:0003756;protein disulfide isomerase activity;0.0480606653106898!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0480606653106898!GO:0005095;GTPase inhibitor activity;0.0485823407064793!GO:0006644;phospholipid metabolic process;0.0487637549697628!GO:0006378;mRNA polyadenylation;0.0489049046958062!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0491171661440186!GO:0007033;vacuole organization and biogenesis;0.0494463104368242!GO:0006596;polyamine biosynthetic process;0.0495177260124939
|sample_id=12224
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone marrow
|top_motifs=MYB:2.23733672757;DMAP1_NCOR{1,2}_SMARC:2.06042414542;POU2F1..3:1.91931746039;ELF1,2,4:1.84624818301;E2F1..5:1.72879687523;STAT1,3:1.64207007668;CREB1:1.57165818867;RUNX1..3:1.46559334508;SPIB:1.45591852756;FOX{I1,J2}:1.39385881567;ATF4:1.3492886003;HIF1A:1.29054949087;ELK1,4_GABP{A,B1}:1.28311883248;ALX1:1.2493716601;YY1:1.18519941466;NANOG{mouse}:1.17999400442;NFY{A,B,C}:1.16265434695;TLX2:1.16264325625;RFX1:1.13245079358;ATF5_CREB3:1.12175533041;RFX2..5_RFXANK_RFXAP:1.11962496518;CDX1,2,4:1.06765483296;ETS1,2:1.0234023634;GATA6:1.02298506527;PBX1:1.00916474012;SPI1:0.946233997613;PAX2:0.944779876692;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.919340621521;IRF1,2:0.914682841071;BREu{core}:0.885886297908;RXR{A,B,G}:0.858055319774;NFKB1_REL_RELA:0.771161204911;NANOG:0.717539481682;RBPJ:0.715595610258;FOXN1:0.704525335393;ZNF143:0.682352124858;FOX{D1,D2}:0.664424383055;XBP1:0.63135375121;NFIL3:0.599462895574;GFI1:0.520196353722;NRF1:0.502529160331;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.499560546797;FOXP3:0.481768877891;bHLH_family:0.45133688414;OCT4_SOX2{dimer}:0.448286924562;NR5A1,2:0.444149624176;SOX2:0.431559705298;PAX5:0.430322174527;FOXQ1:0.429510310004;HBP1_HMGB_SSRP1_UBTF:0.428548720646;FOXA2:0.414742483408;FOX{F1,F2,J1}:0.408205118081;SOX{8,9,10}:0.404387694009;PAX8:0.376509972223;TGIF1:0.372336403694;ATF2:0.368413028342;SREBF1,2:0.360578820904;BPTF:0.352483304739;ARID5B:0.342339609042;MYOD1:0.312455369836;RORA:0.310571750703;VSX1,2:0.305941297535;MEF2{A,B,C,D}:0.273846705042;MYBL2:0.269724908934;NKX6-1,2:0.240572459195;DBP:0.228650714285;EP300:0.19648920348;HAND1,2:0.191180095641;FOXP1:0.118983254467;FOXO1,3,4:0.108647781403;TBP:0.0863434601622;HES1:0.0810609676644;CEBPA,B_DDIT3:0.0712124066916;NKX2-3_NKX2-5:0.0711944552897;POU5F1:0.0632974146405;SOX5:0.0426252241642;IRF7:0.0351288003335;T:0.0326733720832;CUX2:0.00210522461813;JUN:-0.00516229636233;AR:-0.013976935885;PAX6:-0.0499691269041;HLF:-0.0575540701779;HSF1,2:-0.0716690838044;ZEB1:-0.0953597898081;NFATC1..3:-0.11731385049;NFIX:-0.117543789742;EN1,2:-0.119846173321;POU3F1..4:-0.159406463092;GCM1,2:-0.165066089929;NFE2:-0.167998760639;FOSL2:-0.180433862199;NR6A1:-0.184340163983;IKZF2:-0.212539394866;TAL1_TCF{3,4,12}:-0.232830373655;FOS_FOS{B,L1}_JUN{B,D}:-0.233811538333;BACH2:-0.244232099439;PRRX1,2:-0.24906068817;RXRA_VDR{dimer}:-0.250423370785;GZF1:-0.276118436637;TBX4,5:-0.280512630422;SOX17:-0.28174022358;LEF1_TCF7_TCF7L1,2:-0.289568963808;STAT5{A,B}:-0.303790109397;MZF1:-0.305111620737;LMO2:-0.312811603748;NHLH1,2:-0.337554077911;HMX1:-0.341848984971;HOX{A6,A7,B6,B7}:-0.355436965814;HIC1:-0.355798081055;SRF:-0.372198859684;PDX1:-0.397144904218;NKX2-2,8:-0.404430257965;PAX3,7:-0.4131749547;HNF1A:-0.434824633289;HNF4A_NR2F1,2:-0.45529891844;NKX3-1:-0.455838243774;CRX:-0.45947137233;REST:-0.479738224613;PAX4:-0.48310092127;EGR1..3:-0.490933255734;AHR_ARNT_ARNT2:-0.494175546986;ESR1:-0.495272571621;PATZ1:-0.499748733244;SNAI1..3:-0.513966163121;NFE2L2:-0.523796937469;ZNF238:-0.54022102735;ZFP161:-0.542756244342;SP1:-0.544032054824;PITX1..3:-0.547247959604;STAT2,4,6:-0.559790668866;AIRE:-0.57381510812;ATF6:-0.578532672361;TFAP2{A,C}:-0.606390341306;TEF:-0.607450665141;MYFfamily:-0.617500091023;HOXA9_MEIS1:-0.629099509146;ZNF148:-0.646553402636;MAZ:-0.660112764612;ESRRA:-0.666995759116;TOPORS:-0.689617352412;EBF1:-0.692966412367;NKX2-1,4:-0.699309146024;TFDP1:-0.702684327972;MAFB:-0.709055359062;POU1F1:-0.709386296336;MTF1:-0.728277203068;FOXL1:-0.748707929487;MTE{core}:-0.749073128473;HOX{A4,D4}:-0.75231031115;PPARG:-0.775912911341;TFAP2B:-0.790537275243;GTF2I:-0.851069367029;HOX{A5,B5}:-0.854299330971;LHX3,4:-0.941361234877;TFAP4:-0.945085836983;ZBTB16:-0.948149450117;ZNF384:-0.95429627136;ALX4:-0.965562800204;EVI1:-0.969425032193;ZNF423:-0.978448980015;GLI1..3:-0.979250238783;PRDM1:-0.984863804566;MED-1{core}:-1.00864070432;ONECUT1,2:-1.04686272966;CDC5L:-1.06599528618;GTF2A1,2:-1.0715514682;ZBTB6:-1.09379492829;FOXD3:-1.09659301481;ZIC1..3:-1.10145331163;TP53:-1.11542741195;IKZF1:-1.16843258565;XCPE1{core}:-1.18755501646;FOXM1:-1.19254875788;TEAD1:-1.22053596833;TLX1..3_NFIC{dimer}:-1.2721841346;KLF4:-1.29112574924;HMGA1,2:-1.29767219849;NFE2L1:-1.31661789085;POU6F1:-1.41844620681;GFI1B:-1.43232532369;ADNP_IRX_SIX_ZHX:-1.51193971225;UFEwm:-1.54098417412;GATA4:-1.54155195968;RREB1:-1.56235183012;PAX1,9:-1.58260022432;SMAD1..7,9:-1.66411115288;TFCP2:-1.8510795727;NR1H4:-1.85180705908;NR3C1:-2.08120161208;SPZ1:-2.10670731981;NKX3-2:-2.11472380139
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12224-129F1;search_select_hide=table117:FF:12224-129F1
}}
}}

Latest revision as of 18:35, 4 June 2020

Name:CD133+ stem cells - adult bone marrow derived, pool1
Species:Human (Homo sapiens)
Library ID:CNhs12552
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexNA
ageNA
cell typestem cell
cell lineNA
companyStem cell technologies
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005606
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12552 CAGE DRX008047 DRR008919
Accession ID Hg19

Library idBAMCTSS
CNhs12552 DRZ000344 DRZ001729
Accession ID Hg38

Library idBAMCTSS
CNhs12552 DRZ011694 DRZ013079
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.156
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.31
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.201
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.112
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.236
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.18
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.397
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.201
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.258
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0.392
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.112
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0751
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.405
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.989
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.357
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.27
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.112
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.474
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.315
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.451
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.28
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.299
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.112
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.274
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.201
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.402
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.201
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.112
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12552

Jaspar motifP-value
MA0002.20.0246
MA0003.10.566
MA0004.10.178
MA0006.10.214
MA0007.10.391
MA0009.10.66
MA0014.10.523
MA0017.10.655
MA0018.21.74579e-6
MA0019.10.584
MA0024.13.94436e-6
MA0025.11.63364e-6
MA0027.10.129
MA0028.12.41121e-8
MA0029.10.686
MA0030.10.0852
MA0031.10.26
MA0035.20.07
MA0038.10.949
MA0039.20.676
MA0040.10.122
MA0041.10.978
MA0042.10.233
MA0043.13.00419e-14
MA0046.10.49
MA0047.20.865
MA0048.10.24
MA0050.18.9108e-9
MA0051.14.05108e-6
MA0052.10.146
MA0055.10.067
MA0057.10.711
MA0058.10.0269
MA0059.10.0553
MA0060.12.9298e-5
MA0061.10.0022
MA0062.24.40944e-16
MA0065.20.299
MA0066.10.247
MA0067.10.00101
MA0068.11.27324e-4
MA0069.10.0946
MA0070.10.689
MA0071.10.805
MA0072.10.907
MA0073.10.393
MA0074.10.286
MA0076.11.84262e-9
MA0077.10.923
MA0078.10.958
MA0079.20.212
MA0080.22.2943e-12
MA0081.13.95565e-5
MA0083.10.0481
MA0084.10.921
MA0087.10.402
MA0088.10.0716
MA0090.11.59393e-4
MA0091.10.696
MA0092.10.169
MA0093.10.119
MA0099.20.052
MA0100.12.56085e-5
MA0101.10.00135
MA0102.21.84045e-5
MA0103.10.197
MA0104.21.46067e-4
MA0105.10.0143
MA0106.10.0584
MA0107.10.00742
MA0108.20.299
MA0111.10.632
MA0112.20.0847
MA0113.10.3
MA0114.10.681
MA0115.10.968
MA0116.10.0934
MA0117.10.382
MA0119.10.0897
MA0122.10.256
MA0124.10.853
MA0125.10.937
MA0131.10.00514
MA0135.10.404
MA0136.17.52428e-23
MA0137.20.275
MA0138.20.299
MA0139.10.571
MA0140.10.0932
MA0141.10.6
MA0142.10.787
MA0143.10.73
MA0144.10.689
MA0145.10.014
MA0146.10.108
MA0147.17.36389e-4
MA0148.10.447
MA0149.10.662
MA0150.10.934
MA0152.10.176
MA0153.10.0514
MA0154.10.479
MA0155.10.854
MA0156.13.82345e-16
MA0157.10.659
MA0159.10.384
MA0160.10.514
MA0162.10.873
MA0163.18.50027e-6
MA0164.10.587
MA0258.10.102
MA0259.10.0828



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12552

Novel motifP-value
10.499
100.118
1000.741
1010.795
1020.726
1030.626
1040.579
1050.638
1060.23
1070.00174
1080.124
1090.482
110.895
1100.932
1110.322
1120.434
1130.8
1140.312
1150.252
1160.594
1170.021
1180.161
1190.0435
120.412
1200.643
1210.336
1220.675
1230.341
1240.847
1250.355
1260.292
1270.644
1280.183
1290.0539
130.0666
1300.551
1310.211
1320.0512
1330.0721
1340.35
1350.395
1360.039
1370.0378
1380.401
1390.188
140.818
1400.0443
1410.892
1420.792
1430.398
1440.443
1450.389
1460.861
1470.0269
1480.489
1490.063
150.8
1500.761
1510.481
1520.51
1530.248
1540.479
1550.0404
1560.921
1570.0904
1580.988
1590.113
160.218
1600.59
1610.969
1620.097
1630.391
1640.291
1650.347
1660.658
1670.615
1680.507
1690.113
170.176
180.0481
190.105
20.0872
200.18
210.231
220.54
230.00135
240.93
250.287
260.893
270.634
280.703
290.136
30.927
300.146
310.17
320.00577
330.296
340.723
350.753
360.101
370.476
380.374
390.302
40.815
400.289
410.835
420.563
430.23
440.423
450.205
460.359
470.732
480.843
490.371
50.426
500.842
510.628
520.246
530.916
540.208
550.294
560.463
570.472
580.826
590.394
60.996
600.464
610.344
620.783
630.246
640.911
650.042
660.755
670.595
680.884
690.22
70.396
700.00689
710.79
720.617
730.603
740.493
750.0771
760.172
770.0267
780.73
790.183
80.287
800.673
810.64
820.317
830.00263
840.205
850.00818
860.251
870.08
880.449
890.0161
90.613
900.736
910.474
920.0145
930.905
940.71
955.64854e-4
960.75
970.754
980.935
990.00188



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12552


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0000037 (hematopoietic stem cell)
0002092 (bone marrow cell)
0001024 (CD34-positive, CD38-negative hematopoietic stem cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000027 (human CD133-positive hematopoeitic stem cell sample)
0000021 (hematopoietic stem cell sample)
0000001 (sample)
0000020 (human CD133-positive progenitor cell- bone marrow derived sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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