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{{f5samples
{{f5samples
|id=FF:12240-129G8
|DRA_sample_Accession=CAGE@SAMD00004848
|name=chorionic membrane cells, donor3
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004848
|sample_id=12240
|accession_numbers=CAGE;DRX008542;DRR009414;DRZ000839;DRZ002224;DRZ012189;DRZ013574
|rna_tube_id=129G8
|accession_numbers_RNASeq=sRNA-Seq;DRX037204;DRR041570;DRZ007212
|rna_box=129
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0004923,UBERON:0005631,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000476,UBERON:0000478,UBERON:0000158,UBERON:0003124,UBERON:0000920
|rna_position=G8
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000349,CL:0000255,CL:0000034,CL:0002541
|sample_cell_lot=C 12/22
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=chorion
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.41
|rna_od260/280=1.99
|sample_cell_type=unclassifiable
|sample_cell_line=
|sample_collaboration=Hiroo Toyoda (Tokyo University of Pharm and life sciences)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=11.46042
|rna_concentration=0.42446
|sample_note=
|profile_hcage=CNhs12380,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10013,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002541
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000158,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000476,UBERON:0000478,UBERON:0000479,UBERON:0000480,UBERON:0000920,UBERON:0001062,UBERON:0002384,UBERON:0003124,UBERON:0004923,UBERON:0005631
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000038
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr10:8096631..8096660,+!p1@GATA3!2.49!372.06!GATA3;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.41!254.79!PEG3;;chr3:12330560..12330579,+!p1@PPARG!2.35!252.66!PPARG;;chr19:45971246..45971265,+!p1@FOSB!2.27!3231.26!FOSB;;chr6:53013620..53013644,-!p1@GCM1!2.22!166.84!GCM1;;chr10:8096772..8096787,+!p2@GATA3!2.13!158.31!GATA3;;chr2:46524897..46524911,+!p2@EPAS1!1.99!258.52!EPAS1;;chr14:75746722..75746777,+!p2@FOS!1.99!123.13!FOS;;chr1:6479968..6479986,-!p1@HES2!1.99!96.48!HES2;;chr14:75745523..75745537,+!p1@FOS!1.93!9349.96!FOS;;chrX:70316005..70316034,+!p2@FOXO4!1.81!110.87!FOXO4;;chr10:8097321..8097348,+!p4@GATA3!1.76!57.03!GATA3;;chr20:55204351..55204377,+!p1@TFAP2C!1.74!68.23!TFAP2C;;chr9:110252035..110252057,-!p1@KLF4!1.72!780.90!KLF4;;chr11:2291814..2291825,-!p2@ASCL2!1.72!51.70!ASCL2;;chr1:209979467..209979494,-!p1@IRF6!1.66!50.11!IRF6;;chr2:46612891..46612907,+!p10@EPAS1!1.62!40.51!EPAS1;;chr6:10412600..10412637,-!p1@TFAP2A!1.61!64.50!TFAP2A;;chr6:10415276..10415341,-!p2@TFAP2A!1.61!48.51!TFAP2A;;chr5:2751785..2751808,-!p2@IRX2!1.60!38.91!IRX2;;chr5:2751762..2751784,-!p1@IRX2!1.58!37.31!IRX2;;chr6:10415484..10415508,-!p3@TFAP2A!1.57!36.25!TFAP2A;;chr8:102504651..102504683,+!p1@GRHL2!1.56!35.71!GRHL2;;chr3:111314186..111314204,-!p1@ZBED2!1.53!33.05!ZBED2;;chr11:12696102..12696113,+!p5@TEAD1!1.52!31.98!TEAD1;;chr10:114710244..114710257,+!p3@TCF7L2!1.51!82.62!TCF7L2;;chr13:73633131..73633149,+!p1@KLF5!1.50!311.29!KLF5;;chr16:85932760..85932775,+!p1@IRF8!1.50!30.92!IRF8;;chr1:212782094..212782109,+!p1@ATF3!1.49!776.63!ATF3;;chr1:201979743..201979762,+!p1@ELF3!1.49!29.85!ELF3;;chr17:48072574..48072597,-!p1@DLX3!1.49!29.85!DLX3;;chr10:8097295..8097320,+!p6@GATA3!1.47!28.25!GATA3;;chr6:53013605..53013616,-!p2@GCM1!1.46!27.72!GCM1;;chr1:201979703..201979721,+!p2@ELF3!1.45!27.18!ELF3;;chr5:137804484..137804498,+!p2@EGR1!1.43!100.74!EGR1;;chr7:1577899..1577943,+!p3@MAFK!1.42!25.59!MAFK;;chr2:68592406..68592424,+!p1@PLEK!1.42!25.05!PLEK;;chr8:135708787..135708805,-!p2@ZFAT!1.41!24.52!ZFAT;;chr14:75746781..75746799,+!p6@FOS!1.41!24.52!FOS;;chr4:174451370..174451387,-!p1@HAND2!1.39!23.45!HAND2;;chr10:8095593..8095625,+!p3@GATA3!1.37!26.12!GATA3;;chr19:33793430..33793447,-!p1@CEBPA!1.35!87.95!CEBPA;;chr14:75746705..75746720,+!p8@FOS!1.34!20.79!FOS;;chr3:128206762..128206781,-!p2@GATA2!1.33!123.13!GATA2;;chr4:87857474..87857489,+!p7@AFF1!1.32!34.11!AFF1;;chr6:10419884..10419898,-!p11@TFAP2A!1.32!19.72!TFAP2A;;chr2:46524878..46524891,+!p3@EPAS1!1.31!34.11!EPAS1;;chr14:75747296..75747329,+!p4@FOS!1.31!19.19!FOS;;chrX:70316072..70316085,+!p4@FOXO4!1.31!19.19!FOXO4;;chr9:77112244..77112262,+!p1@RORB!1.30!21.32!RORB;;chr1:59249732..59249749,-!p2@JUN!1.29!216.95!JUN;;chr19:45977697..45977713,+!p4@FOSB!1.28!18.12!FOSB;;chr19:45977993..45978005,+!p6@FOSB!1.27!17.59!FOSB;;chrX:70319128..70319142,+!p3@FOXO4!1.27!17.59!FOXO4;;chr8:102504690..102504704,+!p3@GRHL2!1.27!17.59!GRHL2;;chr14:35872453..35872485,-!p2@NFKBIA!1.26!42.11!NFKBIA;;chr19:45974032..45974054,+!p9@FOSB!1.26!17.06!FOSB;;chr19:45977759..45977770,+!p10@FOSB!1.26!17.06!FOSB;;chr8:102504979..102505010,+!p2@GRHL2!1.26!17.06!GRHL2;;chr19:20278043..20278054,+!p2@ZNF486!1.24!16.52!ZNF486;;chr19:45972203..45972226,+!p5@FOSB!1.24!16.52!FOSB;;chr19:929027..929051,+!p4@ARID3A!1.24!16.52!ARID3A;;chrX:70316101..70316112,+!p5@FOXO4!1.24!16.52!FOXO4;;chr5:137801160..137801176,+!p1@EGR1!1.23!1563.39!EGR1;;chrX:56258844..56258882,+!p1@KLF8!1.23!21.85!KLF8;;chr12:19556960..19556982,+!p10@AEBP2!1.23!15.99!AEBP2;;chr11:47400078..47400106,-!p1@SPI1!1.22!15.46!SPI1;;chr1:40367668..40367684,-!p2@MYCL1!1.22!15.46!MYCL1;;chr16:31076332..31076388,-!p3@ZNF668!1.22!15.46!ZNF668;;chr5:137804130..137804156,+!p5@EGR1!1.20!15.99!EGR1;;chr3:128212033..128212051,-!p1@GATA2!1.20!14.92!GATA2;;chr11:2292226..2292270,-!p1@ASCL2!1.20!14.92!ASCL2;;chr17:7493405..7493419,-!p1@SOX15!1.19!14.39!SOX15;;chr9:127358120..127358170,-!p3@NR6A1!1.19!14.39!NR6A1;;chr19:45908292..45908374,-!p1@PPP1R13L!1.18!122.60!PPP1R13L;;chr13:73636252..73636307,+!p2@KLF5!1.18!16.52!KLF5;;chr2:46602879..46602899,+!p8@EPAS1!1.17!16.52!EPAS1;;chr3:39196049..39196062,-!p5@CSRNP1!1.17!13.86!CSRNP1;;chr1:42801540..42801562,-!p4@FOXJ3!1.17!13.86!FOXJ3;;chr2:46602901..46602926,+!p7@EPAS1!1.16!18.12!EPAS1;;chr5:137804357..137804390,+!p4@EGR1!1.16!15.99!EGR1;;chr7:96654133..96654150,-!p1@DLX5!1.16!13.33!DLX5;;chr3:189507432..189507459,+!p1@TP63!1.16!13.33!TP63;;chr3:101568349..101568365,+!p1@NFKBIZ!1.13!643.91!NFKBIZ;;chr8:99956662..99956684,+!p1@OSR2!1.13!19.19!OSR2;;chr21:36260773..36260804,-!p7@RUNX1!1.13!17.06!RUNX1;;chr7:28725715..28725727,+!p3@CREB5!1.13!14.92!CREB5;;chr6:10412392..10412409,-!p4@TFAP2A!1.13!14.39!TFAP2A;;chr13:73636516..73636532,+!p3@KLF5!1.12!13.86!KLF5;;chr19:45974146..45974170,+!p7@FOSB!1.12!12.26!FOSB;;chr22:19748231..19748317,+!p1@TBX1!1.12!12.26!TBX1;;chr2:10091815..10091864,+!p1@GRHL1!1.11!15.99!GRHL1;;chr2:157189180..157189290,-!p1@NR4A2!1.10!61.30!NR4A2;;chr19:45977916..45977932,+!p13@FOSB!1.10!11.73!FOSB;;chr7:115670804..115670825,-!p1@TFEC!1.09!11.19!TFEC;;chrX:131547625..131547644,-!p4@MBNL3!1.09!11.19!MBNL3;;chr20:39317868..39317884,-!p1@MAFB!1.08!130.59!MAFB;;chr19:22235279..22235301,+!p1@ZNF257!1.07!20.26!ZNF257;;chr19:17356189..17356221,-!p2@NR2F6!1.07!17.59!NR2F6;;chr20:62680984..62680999,-!p1@SOX18!1.07!14.39!SOX18;;chr5:137804405..137804444,+!p3@EGR1!1.07!12.79!EGR1;;chr6:10419768..10419819,-!p6@TFAP2A!1.07!10.66!TFAP2A;;chr14:75747250..75747267,+!p5@FOS!1.07!10.66!FOS;;chr20:18038521..18038571,-!p1@OVOL2!1.07!10.66!OVOL2;;chr10:64576105..64576133,-!p1@EGR2!1.06!21.85!EGR2;;chr11:12696071..12696086,+!p3@TEAD1!1.06!13.86!TEAD1;;chr14:35873947..35873965,-!p1@NFKBIA!1.05!653.50!NFKBIA;;chr9:102584159..102584174,+!p2@NR4A3!1.05!18.66!NR4A3;;chr12:19556998..19557013,+!p6@AEBP2!1.05!10.13!AEBP2;;chr3:32023232..32023273,+!p1@ZNF860!1.04!14.39!ZNF860;;chr2:46524537..46524553,+!p1@EPAS1!1.03!958.93!EPAS1;;chr3:141719209..141719215,-!p10@TFDP2!1.03!9.59!TFDP2;;chr10:8100691..8100732,+!p5@GATA3!1.03!9.59!GATA3;;chr21:39870339..39870443,-!p1@ERG!1.03!9.59!ERG;;chr6:10412576..10412599,-!p5@TFAP2A!1.03!9.59!TFAP2A;;chr14:75746687..75746702,+!p10@FOS!1.03!9.59!FOS;;chr1:59249688..59249703,-!p3@JUN!1.01!57.03!JUN;;chr10:51572408..51572454,+!p3@NCOA4!1.01!54.90!NCOA4;;chr11:2292201..2292212,-!p3@ASCL2!1.00!9.06!ASCL2;;chr2:16080659..16080685,+!p1@MYCN!1.00!9.06!MYCN;;chr16:67881534..67881549,-!p4@CENPT!1.00!9.06!CENPT;;chr1:59249707..59249727,-!p1@JUN!0.99!376.32!JUN;;chr19:53496768..53496799,-!p1@ZNF702P!0.99!13.86!ZNF702P;;chr19:20278012..20278034,+!p1@ZNF486!0.97!72.49!ZNF486;;chr14:35872962..35873025,-!p3@NFKBIA!0.97!21.32!NFKBIA;;chr19:926055..926068,+!p2@ARID3A!0.97!18.66!ARID3A;;chr2:46612334..46612349,+!p6@EPAS1!0.97!11.19!EPAS1;;chr8:28243785..28243799,-!p6@ZNF395!0.97!10.13!ZNF395;;chr16:67881588..67881612,-!p2@CENPT!0.96!11.19!CENPT;;chr7:1577952..1577963,+!p8@MAFK!0.95!8.00!MAFK;;chr19:12902289..12902307,+!p1@JUNB!0.94!1819.25!JUNB;;chr4:87857491..87857519,+!p10@AFF1!0.94!10.66!AFF1;;chr13:45010939..45011033,-!p1@TSC22D1!0.93!517.58!TSC22D1;;chr6:126240442..126240459,+!p4@NCOA7!0.93!9.59!NCOA7;;chrX:56258900..56258917,+!p4@KLF8!0.93!7.46!KLF8;;chr12:52445218..52445237,+!p1@NR4A1!0.92!96.48!NR4A1;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.92!73.56!ZNF595;;chr10:35484053..35484076,+!p1@CREM!0.92!18.66!CREM;;chrX:129244655..129244697,-!p4@ELF4!0.92!13.33!ELF4;;chr6:1312325..1312340,+!p1@FOXQ1!0.92!12.26!FOXQ1;;chr19:45972701..45972774,+!p2@FOSB!0.92!10.13!FOSB;;chr22:38598086..38598105,+!p1@MAFF!0.90!77.29!MAFF;;chr1:41827095..41827155,+!p1@FOXO6!0.90!9.59!FOXO6;;chr1:23694556..23694584,-!p6@ZNF436!0.90!9.06!ZNF436;;chr19:45974005..45974026,+!p11@FOSB!0.90!6.93!FOSB;;chr19:48773337..48773339,+!p2@ZNF114!0.90!6.93!ZNF114;;chr12:19556947..19556956,+!p14@AEBP2!0.90!6.93!AEBP2;;chr17:80797886..80797906,-!p1@ZNF750!0.90!6.93!ZNF750;;chr3:24536253..24536328,-!p1@THRB!0.89!13.33!THRB;;chr7:28725740..28725778,+!p1@CREB5!0.87!60.23!CREB5;;chr2:70314240..70314256,+!p4@PCBP1!0.87!13.86!PCBP1;;chr20:50179368..50179392,-!p2@NFATC2!0.87!8.53!NFATC2;;chr2:46524865..46524870,+!p9@EPAS1!0.87!7.46!EPAS1;;chr20:18038486..18038520,-!p2@OVOL2!0.87!6.40!OVOL2;;chr10:8097357..8097368,+!p15@GATA3!0.87!6.40!GATA3;;chr13:73636310..73636330,+!p5@KLF5!0.87!6.40!KLF5;;chr19:926001..926046,+!p1@ARID3A!0.86!22.92!ARID3A;;chr18:3449720..3449749,+!p2@TGIF1!0.86!13.86!TGIF1;;chr8:28243813..28243839,-!p4@ZNF395!0.86!11.73!ZNF395;;chr19:11925071..11925113,+!p1@ZNF440!0.85!46.91!ZNF440;;chr10:3824332..3824425,-!p4@KLF6!0.85!10.13!KLF6;;chr18:51690935..51690957,-!p8@MBD2!0.85!9.06!MBD2;;chr2:231084820..231084836,-!p5@SP110!0.84!6.93!SP110;;chr14:75746579..75746605,+!p9@FOS!0.84!5.86!FOS;;chr6:10419824..10419840,-!p9@TFAP2A!0.84!5.86!TFAP2A;;chr6:29648890..29648944,-!p1@ZFP57!0.84!5.86!ZFP57;;chr7:96635178..96635181,+!p1@DLX6!0.84!5.86!DLX6;;chr8:81787006..81787031,-!p2@ZNF704!0.84!5.86!ZNF704;;chr1:23694532..23694549,-!p8@ZNF436!0.84!5.86!ZNF436;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.86!KDM5D;;chrX:56258885..56258896,+!p5@KLF8!0.84!5.86!KLF8;;chr2:70142232..70142251,+!p1@MXD1!0.83!34.65!MXD1;;chr8:80679993..80680011,-!p1@HEY1!0.83!8.53!HEY1;;chr12:72056800..72056834,+!p1@THAP2!0.83!8.00!THAP2;;chr15:96869511..96869525,+!p16@NR2F2!0.83!6.40!NR2F2;;chr8:103667935..103667960,-!p1@KLF10!0.82!269.72!KLF10;;chr10:111967345..111967422,+!p1@MXI1!0.82!98.08!MXI1;;chrX:129244454..129244488,-!p1@ELF4!0.82!43.18!ELF4;;chr7:1577111..1577132,+!p4@MAFK!0.82!6.40!MAFK;;chrX:106960285..106960299,-!p1@TSC22D3!0.81!158.31!TSC22D3;;chr8:22550982..22550999,-!p1@EGR3!0.81!16.52!EGR3;;chr6:126240380..126240430,+!p2@NCOA7!0.81!14.92!NCOA7;;chr14:75988771..75988826,+!p1@BATF!0.81!7.46!BATF;;chr10:48355030..48355090,+!p1@ZNF488!0.80!6.93!ZNF488;;chr12:54778471..54778528,-!p1@ZNF385A!0.80!5.33!ZNF385A;;chr14:75745247..75745251,+!p14@FOS!0.80!5.33!FOS;;chr14:75746613..75746623,+!p11@FOS!0.80!5.33!FOS;;chr19:52408192..52408200,-!p4@ZNF64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REL;;chr19:48774586..48774670,+!p1@ZNF114!0.63!4.26!ZNF114;;chr14:35872414..35872425,-!p7@NFKBIA!0.63!3.73!NFKBIA;;chr3:5021113..5021180,+!p1@BHLHE40!0.62!263.85!BHLHE40;;chr1:157108130..157108173,-!p1@ETV3!0.62!27.18!ETV3;;chr12:54785054..54785072,-!p4@ZNF385A!0.62!3.73!ZNF385A;;chr10:114710430..114710470,+!p30@TCF7L2!0.62!3.20!TCF7L2;;chr10:8100452..8100463,+!p20@GATA3!0.62!3.20!GATA3;;chr13:36788658..36788703,-!p2@CCDC169-SOHLH2,p2@SOHLH2!0.62!3.20!SOHLH2;;chr13:45010776..45010795,-!p13@TSC22D1!0.62!3.20!TSC22D1;;chr13:73636334..73636351,+!p6@KLF5!0.62!3.20!KLF5;;chr16:67198683..67198698,+!p2@HSF4!0.62!3.20!HSF4;;chr17:74137321..74137337,-!p1@FOXJ1!0.62!3.20!FOXJ1;;chr21:40191431..40191450,+!p7@ETS2!0.62!3.20!ETS2;;chr3:128207349..128207386,-!p3@GATA2!0.62!3.20!GATA2;;chr3:24536231..24536249,-!p4@THRB!0.62!3.20!THRB;;chr3:24536332..24536358,-!p2@THRB!0.62!3.20!THRB;;chr5:142814364..142814381,-!p22@NR3C1!0.62!3.20!NR3C1;;chr8:28243743..28243752,-!p10@ZNF395!0.62!3.20!ZNF395;;chr14:24630465..24630531,+!p1@IRF9!0.61!141.25!IRF9;;chr9:94186101..94186122,-!p1@NFIL3!0.61!51.70!NFIL3;;chr10:104154246..104154347,+!p3@NFKB2!0.61!22.39!NFKB2;;chr19:11959532..11959593,+!p1@ZNF439!0.61!13.86!ZNF439;;chr8:28243934..28243993,-!p3@ZNF395!0.61!9.59!ZNF395;;chr3:12329358..12329393,+!p3@PPARG!0.61!8.53!PPARG;;chr1:91487806..91487826,-!p5@ZNF644!0.61!5.86!ZNF644;;chr21:36260343..36260402,-!p6@RUNX1!0.61!5.33!RUNX1;;chr10:114710098..114710130,+!p2@TCF7L2!0.60!27.18!TCF7L2;;chr7:42276787..42276815,-!p1@GLI3!0.60!9.06!GLI3;;chr18:47814186..47814232,-!p2@CXXC1!0.60!6.93!CXXC1;;chr3:170075103..170075114,+!p5@SKIL!0.60!4.26!SKIL;;chr12:124873357..124873401,-!p1@NCOR2!0.59!40.51!NCOR2;;chr6:19837592..19837621,+!p1@ID4!0.59!21.32!ID4;;chr19:46272462..46272562,-!p1@SIX5!0.59!14.39!SIX5;;chr19:44905759..44905797,-!p2@ZFP112,p2@ZNF285!0.59!7.46!ZNF285;;chr1:91487836..91487854,-!p3@ZNF644!0.59!7.46!ZNF644;;chr10:51572339..51572376,+!p4@NCOA4!0.59!7.46!NCOA4;;chr12:54785074..54785122,-!p2@ZNF385A!0.59!4.80!ZNF385A;;chr13:41635486..41635497,-!p11@ELF1!0.59!4.26!ELF1;;chr19:16435523..16435619,+!p2@KLF2!0.59!4.26!KLF2;;chr3:170075124..170075136,+!p4@SKIL!0.59!4.26!SKIL;;chr20:46130619..46130664,+!p1@NCOA3!0.58!93.81!NCOA3;;chr13:45151259..45151326,-!p2@TSC22D1!0.58!20.26!TSC22D1;;chr15:74833584..74833626,+!p1@ARID3B!0.58!7.46!ARID3B;;chr13:41635067..41635100,-!p5@ELF1!0.58!5.86!ELF1;;chr11:706938..707008,-!p3@DEAF1!0.58!3.73!DEAF1;;chr6:126240463..126240489,+!p6@NCOA7!0.58!3.20!NCOA7;;chr10:63809106..63809127,+!p1@ARID5B!0.57!45.31!ARID5B;;chr3:107241882..107241904,+!p2@BBX!0.57!8.00!BBX;;chr14:74353454..74353469,+!p4@ZNF410!0.57!5.86!ZNF410;;chr19:58400344..58400364,-!p2@ZNF814!0.57!4.26!ZNF814;;chr16:69726820..69726843,+!p3@NFAT5!0.57!4.26!NFAT5;;chr18:19749386..19749404,+!p2@GATA6!0.57!4.26!GATA6;;chr19:52531585..52531596,-!p2@ZNF614!0.57!3.73!ZNF614;;chr8:48650715..48650735,-!p1@CEBPD!0.56!428.03!CEBPD;;chr4:87856191..87856208,+!p2@AFF1!0.56!26.12!AFF1;;chr6:43138999..43139017,+!p2@SRF!0.56!19.19!SRF;;chr12:80084333..80084380,-!p4@PAWR!0.56!15.46!PAWR;;chr19:2900917..2900981,+!p1@ZNF57!0.56!12.26!ZNF57;;chr19:53193790..53193821,-!p3@ZNF83!0.56!9.59!ZNF83;;chr1:8763296..8763339,-!p9@RERE!0.56!7.46!RERE;;chr11:47279504..47279563,+!p1@NR1H3!0.56!6.93!NR1H3;;chr4:87857433..87857472,+!p9@AFF1!0.56!5.33!AFF1;;chr4:87968203..87968221,+!p11@AFF1!0.56!4.80!AFF1;;chr12:6798692..6798723,-!p5@ZNF384!0.56!4.80!ZNF384;;chr7:137686552..137686564,-!p9@CREB3L2!0.56!4.26!CREB3L2;;chr19:12512015..12512044,-!p2@ZNF799!0.56!4.26!ZNF799;;chr10:31288398..31288455,-!p2@ZNF438!0.56!3.20!ZNF438;;chr11:12696579..12696611,+!p4@TEAD1!0.56!2.67!TEAD1;;chr11:65668011..65668020,-!p3@FOSL1!0.56!2.67!FOSL1;;chr13:73636409..73636420,+!p10@KLF5!0.56!2.67!KLF5;;chr16:79634464..79634493,-!p5@MAF!0.56!2.67!MAF;;chr18:42260840..42260860,+!p2@SETBP1!0.56!2.67!SETBP1;;chr18:53089538..53089578,-!p14@TCF4!0.56!2.67!TCF4;;chr19:22605136..22605154,-!p1@ZNF98!0.56!2.67!ZNF98;;chr2:231090471..231090504,+!p2@SP140!0.56!2.67!SP140;;chr3:21792682..21792720,-!p1@ZNF385D!0.56!2.67!ZNF385D;;chr3:24536516..24536545,-!p6@THRB!0.56!2.67!THRB;;chr4:103423079..103423112,+!p4@NFKB1!0.56!2.67!NFKB1;;chr5:142814347..142814358,-!p27@NR3C1!0.56!2.67!NR3C1;;chr5:174151612..174151633,+!p2@MSX2!0.56!2.67!MSX2;;chr6:10413188..10413249,-!p7@TFAP2A!0.56!2.67!TFAP2A;;chr7:27224842..27224872,-!p1@HOXA11!0.56!2.67!HOXA11;;chr7:28763873..28763898,+!p7@CREB5!0.56!2.67!CREB5;;chr7:96634878..96634900,+!p2@DLX6!0.56!2.67!DLX6;;chr7:96635665..96635685,+!p6@DLX6!0.56!2.67!DLX6;;chr8:10588010..10588030,-!p1@SOX7!0.56!2.67!SOX7;;chr19:45974438..45974449,+!p26@FOSB!0.56!2.67!FOSB;;chr19:45978061..45978070,+!p24@FOSB!0.56!2.67!FOSB;;chr1:212873061..212873080,-!p4@BATF3!0.56!2.67!BATF3;;chr1:212873084..212873137,-!p2@BATF3!0.56!2.67!BATF3;;chr1:47695003..47695042,-!p2@TAL1!0.56!2.67!TAL1;;chr8:37553292..37553317,+!p1@ZNF703!0.55!76.76!ZNF703;;chr10:21823128..21823216,+!p1@MLLT10!0.55!28.78!MLLT10;;chr19:53636125..5363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1.07!HOXA11;;chr7:28725585..28725608,+!p11@CREB5!0.32!1.07!CREB5;;chr7:50343634..50343717,+!p2@IKZF1!0.32!1.07!IKZF1;;chr7:50344251..50344288,+!p3@IKZF1!0.32!1.07!IKZF1;;chr7:96634908..96634923,+!p4@DLX6!0.32!1.07!DLX6;;chr7:97840743..97840786,+!p1@BHLHA15!0.32!1.07!BHLHA15;;chr8:128747729..128747748,+!p14@MYC!0.32!1.07!MYC;;chr8:135708824..135708829,-!p24@ZFAT!0.32!1.07!ZFAT;;chr8:144512897..144512903,-!p1@MAFA!0.32!1.07!MAFA;;chr8:80680061..80680075,-!p4@HEY1!0.32!1.07!HEY1;;chr9:117138946..117138968,-!p4@AKNA!0.32!1.07!AKNA;;chr2:191878874..191878938,-!p1@STAT1!0.31!100.21!STAT1;;chr12:104531945..104531996,-!p1@NFYB!0.31!25.05!NFYB;;chr1:37940170..37940190,+!p1@ZC3H12A!0.31!22.39!ZC3H12A;;chr12:80084768..80084821,-!p2@PAWR!0.31!12.26!PAWR;;chr19:58400372..58400411,-!p1@ZNF814!0.31!9.06!ZNF814;;chr10:35415882..35415941,+!p4@CREM!0.31!7.46!CREM;;chrX:106960180..106960197,-!p2@TSC22D3!0.31!6.40!TSC22D3;;chr19:58071201..58071238,-!p1@ZNF550!0.31!5.86!ZNF550;;chr9:20622444..20622468,-!p2@MLLT3!0.31!5.33!MLLT3;;chr19:52674696..52674758,-!p1@ZNF836!0.31!4.80!ZNF836;;chr1:67395982..67396015,+!p4@MIER1!0.31!4.26!MIER1;;chr10:97890024..97890064,+!p2@ZNF518A!0.31!4.26!ZNF518A;;chr15:41913690..41913753,+!p2@MGA!0.31!3.73!MGA;;chr1:204042215..204042228,+!p2@SOX13!0.31!3.20!SOX13;;chr20:39946400..39946423,-!p3@ZHX3!0.31!2.67!ZHX3;;chr20:2673383..2673441,+!p1@EBF4!0.31!2.13!EBF4;;chr22:38598042..38598052,+!p4@MAFF!0.31!2.13!MAFF;;chr2:157198760..157198762,-!p5@NR4A2!0.31!1.60!NR4A2;;chr18:56530812..56530837,+!p10@ZNF532!0.31!1.60!ZNF532;;chr6:21593973..21593988,+!p1@SOX4!0.30!65.56!SOX4;;chr5:16465902..16465917,-!p1@ZNF622!0.30!42.64!ZNF622;;chr18:32820990..32821031,+!p1@ZNF397!0.30!17.59!ZNF397;;chr19:12662240..12662310,-!p1@ZNF564,p1@ZNF709!0.30!13.33!ZNF564;;chrX:47342565..47342638,-!p1@ZNF41!0.30!9.59!ZNF41;;chr3:69788576..69788648,+!p1@MITF!0.30!9.06!MITF;;chr11:62521614..62521646,-!p1@ZBTB3!0.30!8.53!ZBTB3;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.30!6.93!ZNF816;;chr19:37569314..37569381,+!p1@ZNF420!0.30!5.86!ZNF420;;chr19:58446721..58446779,-!p1@ZNF418!0.30!4.26!ZNF418;;chr1:164528340..164528379,+!p4@PBX1!0.30!3.73!PBX1;;chr19:52674898..52674931,-!p3@ZNF836!0.30!3.20!ZNF836;;chr7:1570388..1570418,+!p2@MAFK!0.30!3.20!MAFK;;chr19:19976714..19976729,+!p3@ZNF253!0.30!2.67!ZNF253;;chr6:21597370..21597408,+!p5@SOX4!0.30!2.13!SOX4;;chr7:86781858..86781879,+!p3@DMTF1!0.30!2.13!DMTF1;;chr2:217277271..217277290,+!p3@SMARCAL1!0.30!2.13!SMARCAL1;;chr15:96881221..96881240,+!p19@NR2F2!0.30!1.60!NR2F2;;chr19:33865009..33865090,+!p3@CEBPG!0.30!1.60!CEBPG;;chr20:48809000..48809053,+!p12@CEBPB!0.30!1.60!CEBPB;;chr20:51588873..51588953,+!p1@TSHZ2!0.30!1.60!TSHZ2;;chr14:35873101..35873119,-!p6@NFKBIA!0.30!1.60!NFKBIA;;chr3:183415558..183415649,+!p1@YEATS2!0.29!46.91!YEATS2;;chr1:161736102..161736123,+!p1@ATF6!0.29!46.37!ATF6;;chr19:53606636..53606692,-!p1@ZNF160!0.29!31.45!ZNF160;;chr18:47807845..47807918,-!p1@MBD1!0.29!30.38!MBD1;;chr3:141087339..141087387,+!p2@ZBTB38!0.29!17.59!ZBTB38;;chr8:71316021..71316068,-!p1@NCOA2!0.29!15.99!NCOA2;;chr16:3162557..3162600,+!p1@ZNF205!0.29!14.39!ZNF205;;chr14:74253865..74253917,-!p2@C14orf43!0.29!10.66!C14orf43;;chr7:101459230..101459243,+!p2@CUX1!0.29!8.00!CUX1;;chr19:9785724..9785740,-!p2@ZNF562!0.29!6.40!ZNF562;;chr3:141087393..141087426,+!p3@ZBTB38!0.29!6.40!ZBTB38;;chr6:35310363..35310382,+!p3@PPARD!0.29!5.86!PPARD;;chr9:32552552..32552576,-!p2@TOPORS!0.29!5.86!TOPORS;;chr19:19496577..19496619,+!p5@GATAD2A!0.29!5.33!GATAD2A;;chr1:173837488..173837526,+!p1@ZBTB37!0.29!5.33!ZBTB37;;
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002541;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000158;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003124
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
|created_by=
|creation_date=
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|rna_box=129
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|rna_lot_number=
|rna_od260/230=1.41
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|rna_tube_id=129G8
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|sample_age=
|sample_category=primary cells
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|sample_cell_lot=C 12/22
|sample_cell_type=unclassifiable
|sample_collaboration=Hiroo Toyoda (Tokyo University of Pharm and life sciences)
|sample_company=
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|sample_ethnicity=
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.69161132083247e-228!GO:0005737;cytoplasm;3.03426439936073e-165!GO:0043231;intracellular membrane-bound organelle;5.38459886836597e-138!GO:0043227;membrane-bound organelle;5.38459886836597e-138!GO:0043226;organelle;6.25358438414332e-138!GO:0043229;intracellular organelle;1.51640120629287e-137!GO:0044444;cytoplasmic part;8.44636382518443e-112!GO:0044422;organelle part;4.59930864278637e-92!GO:0044446;intracellular organelle part;1.79814204956403e-90!GO:0005515;protein binding;2.27757581207356e-89!GO:0032991;macromolecular complex;9.5361078027498e-68!GO:0044238;primary metabolic process;1.72795352667131e-65!GO:0043170;macromolecule metabolic process;1.61576757638953e-64!GO:0044237;cellular metabolic process;9.49321954764015e-63!GO:0030529;ribonucleoprotein complex;1.60259269164882e-62!GO:0003723;RNA binding;1.63467031921876e-58!GO:0043233;organelle lumen;1.17587770614515e-50!GO:0031974;membrane-enclosed lumen;1.17587770614515e-50!GO:0019538;protein metabolic process;9.20078575100822e-50!GO:0005634;nucleus;1.02347135003363e-46!GO:0044428;nuclear part;1.40244945350811e-46!GO:0006412;translation;4.954104146307e-45!GO:0031090;organelle membrane;6.64468076339153e-45!GO:0033036;macromolecule localization;1.83387311701145e-44!GO:0015031;protein transport;3.49427097796244e-44!GO:0045184;establishment of protein localization;7.94269159374291e-43!GO:0044260;cellular macromolecule metabolic process;2.72938318617542e-42!GO:0008104;protein localization;5.72433895858614e-42!GO:0044267;cellular protein metabolic process;6.88726643381749e-42!GO:0005739;mitochondrion;1.19797930177834e-41!GO:0016043;cellular component organization and biogenesis;3.87752980458101e-40!GO:0005840;ribosome;2.32316113996367e-37!GO:0009059;macromolecule biosynthetic process;9.00840187963756e-36!GO:0006396;RNA processing;4.04653339663235e-34!GO:0043234;protein complex;4.01319172758682e-33!GO:0003735;structural constituent of ribosome;2.41064212201168e-32!GO:0031981;nuclear lumen;8.02699149091295e-32!GO:0010467;gene expression;1.75201768670911e-31!GO:0005829;cytosol;2.76365314259776e-31!GO:0043283;biopolymer metabolic process;4.05228754133678e-31!GO:0046907;intracellular transport;2.7512842070071e-30!GO:0009058;biosynthetic process;3.29180853659082e-30!GO:0016071;mRNA metabolic process;8.63731293231848e-30!GO:0006886;intracellular protein transport;1.27489840568825e-29!GO:0033279;ribosomal subunit;2.00413926468839e-29!GO:0065003;macromolecular complex assembly;2.64581526865299e-29!GO:0008380;RNA splicing;2.82441019412887e-29!GO:0031967;organelle envelope;3.46961133901344e-29!GO:0044249;cellular biosynthetic process;6.04196183380814e-29!GO:0031975;envelope;7.58079854957234e-29!GO:0044429;mitochondrial part;7.60577632047621e-29!GO:0022607;cellular component assembly;9.940824764294e-27!GO:0006397;mRNA processing;1.75165337954542e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.19964994902929e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.16241683571573e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.28984818312525e-22!GO:0005681;spliceosome;1.83661129922769e-21!GO:0051649;establishment of cellular localization;1.83661129922769e-21!GO:0051641;cellular localization;2.97694685808123e-21!GO:0005740;mitochondrial envelope;7.13019005307095e-21!GO:0005654;nucleoplasm;1.60334705177382e-20!GO:0044445;cytosolic part;1.81668163367687e-20!GO:0031966;mitochondrial membrane;4.88446810667502e-20!GO:0012505;endomembrane system;7.33141771132691e-20!GO:0005783;endoplasmic reticulum;1.01657160240743e-19!GO:0012501;programmed cell death;8.67901544158119e-19!GO:0006915;apoptosis;1.12769986156446e-18!GO:0008134;transcription factor binding;2.48463008778739e-18!GO:0019866;organelle inner membrane;5.82172894065908e-18!GO:0008219;cell death;1.41840125952699e-17!GO:0016265;death;1.41840125952699e-17!GO:0044451;nucleoplasm part;1.85713732397623e-17!GO:0006119;oxidative phosphorylation;1.98290771204252e-17!GO:0048770;pigment granule;3.2421589375856e-17!GO:0042470;melanosome;3.2421589375856e-17!GO:0005794;Golgi apparatus;3.44194505643584e-17!GO:0005743;mitochondrial inner membrane;5.08185047629716e-17!GO:0006996;organelle organization and biogenesis;6.73077538901797e-17!GO:0022618;protein-RNA complex assembly;3.19272744942115e-16!GO:0016192;vesicle-mediated transport;4.53220846621883e-16!GO:0015935;small ribosomal subunit;1.84093001040748e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.97360975113514e-15!GO:0043228;non-membrane-bound organelle;2.1449185230402e-15!GO:0043232;intracellular non-membrane-bound organelle;2.1449185230402e-15!GO:0044432;endoplasmic reticulum part;2.49330377298943e-15!GO:0019941;modification-dependent protein catabolic process;4.12383047222071e-15!GO:0043632;modification-dependent macromolecule catabolic process;4.12383047222071e-15!GO:0044257;cellular protein catabolic process;5.09031283900601e-15!GO:0006457;protein folding;7.74075542677246e-15!GO:0015934;large ribosomal subunit;8.20214247924295e-15!GO:0044265;cellular macromolecule catabolic process;9.22719860002548e-15!GO:0006511;ubiquitin-dependent protein catabolic process;9.72793522733356e-15!GO:0006605;protein targeting;2.05773532134945e-14!GO:0044455;mitochondrial membrane part;2.87429407287396e-14!GO:0043285;biopolymer catabolic process;3.59046286044032e-14!GO:0016462;pyrophosphatase activity;5.56307092514238e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;7.10400264443443e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.67644834844271e-14!GO:0048523;negative regulation of cellular process;1.60409181822569e-13!GO:0006512;ubiquitin cycle;3.89392568381994e-13!GO:0000502;proteasome complex (sensu Eukaryota);4.12603034366128e-13!GO:0016874;ligase activity;5.36880936811009e-13!GO:0016070;RNA metabolic process;5.46271539739296e-13!GO:0017111;nucleoside-triphosphatase activity;5.65035078909382e-13!GO:0003676;nucleic acid binding;7.75382401334867e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.22667575121906e-13!GO:0030163;protein catabolic process;8.38746876872021e-13!GO:0048193;Golgi vesicle transport;1.42173305904398e-12!GO:0005730;nucleolus;1.85548390613979e-12!GO:0009057;macromolecule catabolic process;1.9891941987429e-12!GO:0006461;protein complex assembly;2.04315274460381e-12!GO:0005773;vacuole;3.86849464144671e-12!GO:0043412;biopolymer modification;6.8046619611516e-12!GO:0050794;regulation of cellular process;6.8046619611516e-12!GO:0051082;unfolded protein binding;1.3412879342891e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;1.37570903676438e-11!GO:0000375;RNA splicing, via transesterification reactions;1.37570903676438e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.37570903676438e-11!GO:0048519;negative regulation of biological process;1.81640390799099e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.03965787154977e-11!GO:0005746;mitochondrial respiratory chain;2.25573373227374e-11!GO:0042981;regulation of apoptosis;2.52615097392679e-11!GO:0000166;nucleotide binding;2.87995101724193e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.93151624535491e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.22993940066236e-11!GO:0043067;regulation of programmed cell death;4.61010305343642e-11!GO:0050136;NADH dehydrogenase (quinone) activity;4.94535480359102e-11!GO:0003954;NADH dehydrogenase activity;4.94535480359102e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.94535480359102e-11!GO:0008135;translation factor activity, nucleic acid binding;4.97640397441756e-11!GO:0000323;lytic vacuole;5.64406649403193e-11!GO:0005764;lysosome;5.64406649403193e-11!GO:0043069;negative regulation of programmed cell death;6.16879037085932e-11!GO:0005789;endoplasmic reticulum membrane;7.37893706604973e-11!GO:0006464;protein modification process;7.44791027110803e-11!GO:0016604;nuclear body;8.9183047916927e-11!GO:0005793;ER-Golgi intermediate compartment;9.29660991710906e-11!GO:0043066;negative regulation of apoptosis;1.10024149797967e-10!GO:0051246;regulation of protein metabolic process;1.12937795980197e-10!GO:0008565;protein transporter activity;1.36429176650388e-10!GO:0006916;anti-apoptosis;1.59097691994419e-10!GO:0044248;cellular catabolic process;1.73589379244735e-10!GO:0003712;transcription cofactor activity;2.53721892416674e-10!GO:0006446;regulation of translational initiation;3.04141194278747e-10!GO:0006413;translational initiation;3.8270840637109e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.72319880269765e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.23269160362231e-10!GO:0031980;mitochondrial lumen;8.84952501864641e-10!GO:0005759;mitochondrial matrix;8.84952501864641e-10!GO:0006913;nucleocytoplasmic transport;1.08159778534696e-09!GO:0050789;regulation of biological process;1.12482029836631e-09!GO:0006259;DNA metabolic process;1.35919479636535e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.62055674595329e-09!GO:0008639;small protein conjugating enzyme activity;1.80358653158369e-09!GO:0042775;organelle ATP synthesis coupled electron transport;1.89048818585082e-09!GO:0042773;ATP synthesis coupled electron transport;1.89048818585082e-09!GO:0016607;nuclear speck;1.89048818585082e-09!GO:0006366;transcription from RNA polymerase II promoter;1.9830122110635e-09!GO:0051169;nuclear transport;2.1030942575467e-09!GO:0004842;ubiquitin-protein ligase activity;2.40114128072317e-09!GO:0030964;NADH dehydrogenase complex (quinone);2.814814585259e-09!GO:0045271;respiratory chain complex I;2.814814585259e-09!GO:0005747;mitochondrial respiratory chain complex I;2.814814585259e-09!GO:0019787;small conjugating protein ligase activity;3.22323875766061e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.3514925411847e-09!GO:0003743;translation initiation factor activity;4.40298458487e-09!GO:0043687;post-translational protein modification;5.88291573444574e-09!GO:0005768;endosome;7.39303175473449e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.48305110123566e-09!GO:0005635;nuclear envelope;7.65120287617325e-09!GO:0007243;protein kinase cascade;9.3585324559664e-09!GO:0005761;mitochondrial ribosome;9.48412946945202e-09!GO:0000313;organellar ribosome;9.48412946945202e-09!GO:0017038;protein import;1.75027368947144e-08!GO:0051186;cofactor metabolic process;2.64293043608308e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.04926200427362e-08!GO:0006888;ER to Golgi vesicle-mediated transport;5.50976758123789e-08!GO:0048475;coated membrane;6.81185780551476e-08!GO:0030117;membrane coat;6.81185780551476e-08!GO:0005770;late endosome;8.46418788979795e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.0431706316302e-07!GO:0032553;ribonucleotide binding;1.11378880337087e-07!GO:0032555;purine ribonucleotide binding;1.11378880337087e-07!GO:0042254;ribosome biogenesis and assembly;1.26067573978282e-07!GO:0016564;transcription repressor activity;1.51102022318182e-07!GO:0007049;cell cycle;1.62129063529696e-07!GO:0006950;response to stress;1.7468328888991e-07!GO:0031965;nuclear membrane;2.49079044800483e-07!GO:0015986;ATP synthesis coupled proton transport;2.54509010713757e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.54509010713757e-07!GO:0007264;small GTPase mediated signal transduction;2.9036314897101e-07!GO:0006732;coenzyme metabolic process;3.12058989703834e-07!GO:0031252;leading edge;3.32106072609863e-07!GO:0017076;purine nucleotide binding;3.60480005022081e-07!GO:0031988;membrane-bound vesicle;3.61160478097164e-07!GO:0003924;GTPase activity;3.80027175044684e-07!GO:0044431;Golgi apparatus part;4.01655234630573e-07!GO:0009055;electron carrier activity;4.1502603313401e-07!GO:0031982;vesicle;4.29753651104679e-07!GO:0030120;vesicle coat;5.1266273649922e-07!GO:0030662;coated vesicle membrane;5.1266273649922e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.64612401514936e-07!GO:0016023;cytoplasmic membrane-bound vesicle;6.01247775540809e-07!GO:0006793;phosphorus metabolic process;6.12436603804928e-07!GO:0006796;phosphate metabolic process;6.12436603804928e-07!GO:0019899;enzyme binding;8.26470521706782e-07!GO:0031410;cytoplasmic vesicle;8.68758272051436e-07!GO:0006164;purine nucleotide biosynthetic process;9.48923667451786e-07!GO:0016881;acid-amino acid ligase activity;9.8213863454632e-07!GO:0031324;negative regulation of cellular metabolic process;1.07686658060827e-06!GO:0065007;biological regulation;1.08930574930512e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.26945214611712e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.26945214611712e-06!GO:0048522;positive regulation of cellular process;1.32489589631176e-06!GO:0006163;purine nucleotide metabolic process;1.38230780524844e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.4334901179587e-06!GO:0009259;ribonucleotide metabolic process;1.43483167453054e-06!GO:0005525;GTP binding;1.58546331352096e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.62889801562573e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.6551752055962e-06!GO:0000074;regulation of progression through cell cycle;1.72492015536231e-06!GO:0051170;nuclear import;1.86172072378003e-06!GO:0044453;nuclear membrane part;1.92684975049598e-06!GO:0051726;regulation of cell cycle;1.97542823910164e-06!GO:0009150;purine ribonucleotide metabolic process;2.21592275972811e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.27943573105464e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.27943573105464e-06!GO:0005788;endoplasmic reticulum lumen;2.39893236067653e-06!GO:0004386;helicase activity;2.50111531157343e-06!GO:0009260;ribonucleotide biosynthetic process;2.64538831743562e-06!GO:0006754;ATP biosynthetic process;3.05621164176362e-06!GO:0006753;nucleoside phosphate metabolic process;3.05621164176362e-06!GO:0016887;ATPase activity;3.16790812469162e-06!GO:0006606;protein import into nucleus;3.19156917916386e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.19156917916386e-06!GO:0004812;aminoacyl-tRNA ligase activity;3.19156917916386e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.19156917916386e-06!GO:0042623;ATPase activity, coupled;3.36518754212465e-06!GO:0003714;transcription corepressor activity;3.74799573307301e-06!GO:0065002;intracellular protein transport across a membrane;4.35621996711029e-06!GO:0032446;protein modification by small protein conjugation;5.13549292299462e-06!GO:0009199;ribonucleoside triphosphate metabolic process;5.16980782636353e-06!GO:0005839;proteasome core complex (sensu Eukaryota);5.19353577212218e-06!GO:0043038;amino acid activation;5.27939885089208e-06!GO:0006418;tRNA aminoacylation for protein translation;5.27939885089208e-06!GO:0043039;tRNA aminoacylation;5.27939885089208e-06!GO:0006417;regulation of translation;5.5829801068074e-06!GO:0030036;actin cytoskeleton organization and biogenesis;5.59842337170702e-06!GO:0000245;spliceosome assembly;5.78133934122895e-06!GO:0008026;ATP-dependent helicase activity;5.78133934122895e-06!GO:0005643;nuclear pore;5.90575302132669e-06!GO:0009141;nucleoside triphosphate metabolic process;5.94676439525541e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.94676439525541e-06!GO:0009056;catabolic process;5.99337130076353e-06!GO:0044440;endosomal part;5.99495483462422e-06!GO:0010008;endosome membrane;5.99495483462422e-06!GO:0019829;cation-transporting ATPase activity;6.33881406485782e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.83547759292094e-06!GO:0009144;purine nucleoside triphosphate metabolic process;8.83547759292094e-06!GO:0016567;protein ubiquitination;9.34695184776974e-06!GO:0048518;positive regulation of biological process;1.13279433146791e-05!GO:0016044;membrane organization and biogenesis;1.21495899076328e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.26989165525807e-05!GO:0006399;tRNA metabolic process;1.27399558780279e-05!GO:0009060;aerobic respiration;1.30036614664873e-05!GO:0000139;Golgi membrane;1.31651871724462e-05!GO:0009892;negative regulation of metabolic process;1.44289899257763e-05!GO:0007005;mitochondrion organization and biogenesis;1.44289899257763e-05!GO:0003713;transcription coactivator activity;1.47670809536509e-05!GO:0050657;nucleic acid transport;1.53117614937049e-05!GO:0051236;establishment of RNA localization;1.53117614937049e-05!GO:0050658;RNA transport;1.53117614937049e-05!GO:0043623;cellular protein complex assembly;1.81522279017136e-05!GO:0016310;phosphorylation;1.82542621512305e-05!GO:0016563;transcription activator activity;1.8343582522316e-05!GO:0046034;ATP metabolic process;1.86083936838871e-05!GO:0048468;cell development;1.89221830379799e-05!GO:0045259;proton-transporting ATP synthase complex;2.12539001097424e-05!GO:0004298;threonine endopeptidase activity;2.15426002284083e-05!GO:0006613;cotranslational protein targeting to membrane;2.15505247733646e-05!GO:0007242;intracellular signaling cascade;2.23249034917216e-05!GO:0008361;regulation of cell size;2.54130745617339e-05!GO:0006403;RNA localization;2.60112260903174e-05!GO:0009967;positive regulation of signal transduction;2.72820889256769e-05!GO:0015078;hydrogen ion transmembrane transporter activity;2.81347349072279e-05!GO:0032561;guanyl ribonucleotide binding;2.87708678846927e-05!GO:0019001;guanyl nucleotide binding;2.87708678846927e-05!GO:0016049;cell growth;3.3383076578495e-05!GO:0030029;actin filament-based process;3.51690141292833e-05!GO:0005667;transcription factor complex;3.65997941304647e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.78995706707889e-05!GO:0006752;group transfer coenzyme metabolic process;4.65181901301887e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;5.46973044200174e-05!GO:0051789;response to protein stimulus;6.2563631994749e-05!GO:0006986;response to unfolded protein;6.2563631994749e-05!GO:0007265;Ras protein signal transduction;7.0310981158001e-05!GO:0016787;hydrolase activity;7.09521579947519e-05!GO:0003697;single-stranded DNA binding;7.50577249136911e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.59299753944096e-05!GO:0009966;regulation of signal transduction;7.60738705694713e-05!GO:0005524;ATP binding;7.6160166406177e-05!GO:0016481;negative regulation of transcription;8.08723605704153e-05!GO:0045786;negative regulation of progression through cell cycle;8.23906409834857e-05!GO:0003724;RNA helicase activity;8.26568269833922e-05!GO:0042802;identical protein binding;8.89403217495665e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;9.93881867125361e-05!GO:0065009;regulation of a molecular function;0.000100428875450997!GO:0030867;rough endoplasmic reticulum membrane;0.00010054673651863!GO:0006974;response to DNA damage stimulus;0.000103684006911369!GO:0045333;cellular respiration;0.000103684006911369!GO:0006364;rRNA processing;0.000111641799967439!GO:0005774;vacuolar membrane;0.000120339597921961!GO:0016072;rRNA metabolic process;0.000122842882238842!GO:0006323;DNA packaging;0.000127081265457579!GO:0046930;pore complex;0.000135287497283036!GO:0033116;ER-Golgi intermediate compartment membrane;0.000144185659064974!GO:0051427;hormone receptor binding;0.000144773601999614!GO:0031326;regulation of cellular biosynthetic process;0.000148814593064262!GO:0043566;structure-specific DNA binding;0.000150243947970641!GO:0016853;isomerase activity;0.000157320306222232!GO:0000151;ubiquitin ligase complex;0.000175979888880591!GO:0032559;adenyl ribonucleotide binding;0.000175979888880591!GO:0006099;tricarboxylic acid cycle;0.000179586871978756!GO:0046356;acetyl-CoA catabolic process;0.000179586871978756!GO:0019843;rRNA binding;0.000201949169056363!GO:0001558;regulation of cell growth;0.000213457712698163!GO:0008286;insulin receptor signaling pathway;0.00021772618173677!GO:0051028;mRNA transport;0.000222018615167395!GO:0009615;response to virus;0.000223994655598171!GO:0022402;cell cycle process;0.000234690805189147!GO:0005798;Golgi-associated vesicle;0.00025162182105048!GO:0019222;regulation of metabolic process;0.00025470438052492!GO:0035257;nuclear hormone receptor binding;0.000271858658329381!GO:0009889;regulation of biosynthetic process;0.00027894787948716!GO:0030133;transport vesicle;0.000300498699811407!GO:0008092;cytoskeletal protein binding;0.000314810154034173!GO:0005741;mitochondrial outer membrane;0.00034077045966924!GO:0006084;acetyl-CoA metabolic process;0.000340905410844596!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000361234162124451!GO:0009719;response to endogenous stimulus;0.000373838263652348!GO:0005048;signal sequence binding;0.000377239485374918!GO:0016568;chromatin modification;0.000389964638887946!GO:0016197;endosome transport;0.000389964638887946!GO:0051188;cofactor biosynthetic process;0.000391493012804157!GO:0004576;oligosaccharyl transferase activity;0.000457530758713786!GO:0031968;organelle outer membrane;0.000462747054247479!GO:0003729;mRNA binding;0.000481529346191686!GO:0044437;vacuolar part;0.000483195625655701!GO:0030554;adenyl nucleotide binding;0.000494874771801481!GO:0019867;outer membrane;0.000504005629552223!GO:0008250;oligosaccharyl transferase complex;0.000515716281529637!GO:0005791;rough endoplasmic reticulum;0.000516596672124072!GO:0031902;late endosome membrane;0.000519568146003552!GO:0030118;clathrin coat;0.000519568146003552!GO:0005765;lysosomal membrane;0.000555602340136384!GO:0005769;early endosome;0.00061438708642754!GO:0001726;ruffle;0.000634804987696723!GO:0005885;Arp2/3 protein complex;0.00066652672744078!GO:0006612;protein targeting to membrane;0.000749987132515207!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000763829184360304!GO:0051235;maintenance of localization;0.00078680334979324!GO:0006891;intra-Golgi vesicle-mediated transport;0.000875516310228429!GO:0051187;cofactor catabolic process;0.000969477504461314!GO:0006281;DNA repair;0.00105864769821414!GO:0065004;protein-DNA complex assembly;0.0010683093975574!GO:0009109;coenzyme catabolic process;0.00114673357383189!GO:0008186;RNA-dependent ATPase activity;0.00116405092395708!GO:0043021;ribonucleoprotein binding;0.00123063858521445!GO:0048471;perinuclear region of cytoplasm;0.00123324884084631!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00130034105426655!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00132938846720434!GO:0043065;positive regulation of apoptosis;0.00134916031219704!GO:0045454;cell redox homeostasis;0.00135676148013585!GO:0051920;peroxiredoxin activity;0.00142710314395679!GO:0005762;mitochondrial large ribosomal subunit;0.00142849528664056!GO:0000315;organellar large ribosomal subunit;0.00142849528664056!GO:0018196;peptidyl-asparagine modification;0.00145483208831805!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00145483208831805!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00154970295659746!GO:0045892;negative regulation of transcription, DNA-dependent;0.00156283344419859!GO:0009117;nucleotide metabolic process;0.00161171468194367!GO:0016859;cis-trans isomerase activity;0.00165847857598078!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00168698480569911!GO:0051252;regulation of RNA metabolic process;0.00168698480569911!GO:0045045;secretory pathway;0.00179870596379594!GO:0009108;coenzyme biosynthetic process;0.00181794406171901!GO:0000785;chromatin;0.00181843888139101!GO:0051276;chromosome organization and biogenesis;0.00189024609270249!GO:0046983;protein dimerization activity;0.00189543525419368!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00196834131537563!GO:0032940;secretion by cell;0.00200461227304547!GO:0030027;lamellipodium;0.00205003334403528!GO:0001666;response to hypoxia;0.00206499960921386!GO:0043068;positive regulation of programmed cell death;0.00213590408746861!GO:0005905;coated pit;0.00227512057860527!GO:0005912;adherens junction;0.00233014629758346!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.002586667833117!GO:0007040;lysosome organization and biogenesis;0.00258972072821408!GO:0016779;nucleotidyltransferase activity;0.00261167906271903!GO:0030119;AP-type membrane coat adaptor complex;0.00300899585033906!GO:0050790;regulation of catalytic activity;0.00300899585033906!GO:0008654;phospholipid biosynthetic process;0.00303088038372539!GO:0006333;chromatin assembly or disassembly;0.00312858457357759!GO:0004004;ATP-dependent RNA helicase activity;0.00316407310769031!GO:0007033;vacuole organization and biogenesis;0.00326250971341397!GO:0033673;negative regulation of kinase activity;0.00326250971341397!GO:0006469;negative regulation of protein kinase activity;0.00326250971341397!GO:0005083;small GTPase regulator activity;0.0034022247169095!GO:0006897;endocytosis;0.00346532364372963!GO:0010324;membrane invagination;0.00346532364372963!GO:0006414;translational elongation;0.0039005491877005!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00443599371413254!GO:0048500;signal recognition particle;0.00458983213083601!GO:0030134;ER to Golgi transport vesicle;0.00461716504054019!GO:0051168;nuclear export;0.00469727563087389!GO:0007050;cell cycle arrest;0.00476801948243706!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00495552201814212!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00517968062371939!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00517968062371939!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00517968062371939!GO:0016740;transferase activity;0.00537008333878138!GO:0030127;COPII vesicle coat;0.00537008333878138!GO:0012507;ER to Golgi transport vesicle membrane;0.00537008333878138!GO:0030658;transport vesicle membrane;0.00538932769313687!GO:0051348;negative regulation of transferase activity;0.00565967084221222!GO:0051087;chaperone binding;0.00568562791176221!GO:0006626;protein targeting to mitochondrion;0.00571616692627992!GO:0008283;cell proliferation;0.00597760478580213!GO:0035258;steroid hormone receptor binding;0.00610808288823546!GO:0030176;integral to endoplasmic reticulum membrane;0.00614256864022419!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00630935076027272!GO:0030131;clathrin adaptor complex;0.00633380838740527!GO:0030218;erythrocyte differentiation;0.00653937470865843!GO:0043681;protein import into mitochondrion;0.00667519776624115!GO:0006402;mRNA catabolic process;0.00673949352051005!GO:0030041;actin filament polymerization;0.00687092361463827!GO:0045941;positive regulation of transcription;0.00688421069469888!GO:0008047;enzyme activator activity;0.00694412417188954!GO:0005684;U2-dependent spliceosome;0.00716285455754244!GO:0006487;protein amino acid N-linked glycosylation;0.00716557700005547!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00731442985423711!GO:0000314;organellar small ribosomal subunit;0.00745247050307009!GO:0005763;mitochondrial small ribosomal subunit;0.00745247050307009!GO:0046822;regulation of nucleocytoplasmic transport;0.00756927840069985!GO:0006839;mitochondrial transport;0.00768954774191946!GO:0051338;regulation of transferase activity;0.00773790195482307!GO:0017166;vinculin binding;0.00777239213598104!GO:0030663;COPI coated vesicle membrane;0.00807336316708075!GO:0030126;COPI vesicle coat;0.00807336316708075!GO:0016860;intramolecular oxidoreductase activity;0.00819429281638272!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00823683696146578!GO:0051270;regulation of cell motility;0.00843186096528226!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00871291751984436!GO:0045893;positive regulation of transcription, DNA-dependent;0.00879995921738225!GO:0051101;regulation of DNA binding;0.00899222553004144!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00923204122183329!GO:0043488;regulation of mRNA stability;0.00977802799163086!GO:0043487;regulation of RNA stability;0.00977802799163086!GO:0030833;regulation of actin filament polymerization;0.00982256289778784!GO:0040008;regulation of growth;0.00982422174595845!GO:0030132;clathrin coat of coated pit;0.00983978826016367!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00983978826016367!GO:0045047;protein targeting to ER;0.00983978826016367!GO:0045185;maintenance of protein localization;0.00995215003618983!GO:0006401;RNA catabolic process;0.00996899168549308!GO:0031901;early endosome membrane;0.00997550437255595!GO:0030521;androgen receptor signaling pathway;0.0100563841847131!GO:0008234;cysteine-type peptidase activity;0.0101303282069163!GO:0008632;apoptotic program;0.010164809706597!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0107342994444195!GO:0031323;regulation of cellular metabolic process;0.0108400598158799!GO:0030659;cytoplasmic vesicle membrane;0.0109842478143444!GO:0045637;regulation of myeloid cell differentiation;0.0113283665854807!GO:0032507;maintenance of cellular protein localization;0.0113566756995974!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0116128048745425!GO:0018193;peptidyl-amino acid modification;0.0117566421437081!GO:0005869;dynactin complex;0.0123738761628318!GO:0044262;cellular carbohydrate metabolic process;0.0124024129178208!GO:0030695;GTPase regulator activity;0.012831462734012!GO:0003899;DNA-directed RNA polymerase activity;0.0135135920909469!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0137175117985457!GO:0048487;beta-tubulin binding;0.0139018693663311!GO:0005099;Ras GTPase activator activity;0.0144200251265461!GO:0043549;regulation of kinase activity;0.0144455530592102!GO:0016363;nuclear matrix;0.014593766022272!GO:0007266;Rho protein signal transduction;0.0147728992875059!GO:0015980;energy derivation by oxidation of organic compounds;0.0148607662851883!GO:0030660;Golgi-associated vesicle membrane;0.0148865466938015!GO:0007034;vacuolar transport;0.0153620471715248!GO:0047485;protein N-terminus binding;0.0155874600615715!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0159083459102361!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0159083459102361!GO:0016791;phosphoric monoester hydrolase activity;0.0161375131126438!GO:0008312;7S RNA binding;0.0162053344180203!GO:0006917;induction of apoptosis;0.0162053344180203!GO:0043087;regulation of GTPase activity;0.0166358447043144!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0167426153961173!GO:0031529;ruffle organization and biogenesis;0.0169981084979051!GO:0006650;glycerophospholipid metabolic process;0.0169981084979051!GO:0003690;double-stranded DNA binding;0.0173933973833092!GO:0030384;phosphoinositide metabolic process;0.0175061249083821!GO:0045936;negative regulation of phosphate metabolic process;0.0178051677009317!GO:0007167;enzyme linked receptor protein signaling pathway;0.0180411728725678!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0190259809134903!GO:0031072;heat shock protein binding;0.0191004602947205!GO:0006091;generation of precursor metabolites and energy;0.0194621588397539!GO:0009607;response to biotic stimulus;0.0200001229605189!GO:0051336;regulation of hydrolase activity;0.0206134556277176!GO:0003711;transcription elongation regulator activity;0.0208414409500858!GO:0005694;chromosome;0.0210152435430801!GO:0008139;nuclear localization sequence binding;0.0210152435430801!GO:0006376;mRNA splice site selection;0.0210152435430801!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0210152435430801!GO:0051051;negative regulation of transport;0.0213059595825924!GO:0051223;regulation of protein transport;0.0214600714080725!GO:0012502;induction of programmed cell death;0.0215900325803069!GO:0022415;viral reproductive process;0.021643315413605!GO:0031625;ubiquitin protein ligase binding;0.021992868850568!GO:0005813;centrosome;0.0220184223902552!GO:0043022;ribosome binding;0.0227292786820115!GO:0030125;clathrin vesicle coat;0.0232155463466963!GO:0030665;clathrin coated vesicle membrane;0.0232155463466963!GO:0030518;steroid hormone receptor signaling pathway;0.0232637567863375!GO:0003725;double-stranded RNA binding;0.0233906163644294!GO:0005096;GTPase activator activity;0.0238453276762322!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0238453276762322!GO:0006979;response to oxidative stress;0.0240379256033405!GO:0006352;transcription initiation;0.0245303813551197!GO:0004563;beta-N-acetylhexosaminidase activity;0.0250237325242021!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0252275799541591!GO:0015399;primary active transmembrane transporter activity;0.0252275799541591!GO:0040011;locomotion;0.0254041541573529!GO:0040012;regulation of locomotion;0.0254737918743819!GO:0051651;maintenance of cellular localization;0.0254737918743819!GO:0045859;regulation of protein kinase activity;0.0254842332816299!GO:0016491;oxidoreductase activity;0.026137583390286!GO:0044433;cytoplasmic vesicle part;0.0263054047161225!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.026799301296154!GO:0050681;androgen receptor binding;0.0268077227333527!GO:0004860;protein kinase inhibitor activity;0.0269002524132259!GO:0012506;vesicle membrane;0.0271179515219104!GO:0030137;COPI-coated vesicle;0.0271179515219104!GO:0008154;actin polymerization and/or depolymerization;0.0280169898487681!GO:0006818;hydrogen transport;0.0285029566277178!GO:0019372;lipoxygenase pathway;0.0297036436231571!GO:0022406;membrane docking;0.0299878972253002!GO:0048278;vesicle docking;0.0299878972253002!GO:0001725;stress fiber;0.0301846986884927!GO:0032432;actin filament bundle;0.0301846986884927!GO:0045767;regulation of anti-apoptosis;0.0303163584438196!GO:0042326;negative regulation of phosphorylation;0.0304604238280891!GO:0006509;membrane protein ectodomain proteolysis;0.030793345463371!GO:0033619;membrane protein proteolysis;0.030793345463371!GO:0006260;DNA replication;0.0308909130014944!GO:0006611;protein export from nucleus;0.0309519667769551!GO:0045792;negative regulation of cell size;0.031163984534645!GO:0051220;cytoplasmic sequestering of protein;0.0314035389292381!GO:0007162;negative regulation of cell adhesion;0.0314035389292381!GO:0044427;chromosomal part;0.0317561408000996!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0318306797813077!GO:0051325;interphase;0.0318355909235759!GO:0007041;lysosomal transport;0.0321080812065105!GO:0051098;regulation of binding;0.0325665477545257!GO:0006904;vesicle docking during exocytosis;0.0330884408997409!GO:0019079;viral genome replication;0.0331244697258407!GO:0009893;positive regulation of metabolic process;0.033304624452637!GO:0051674;localization of cell;0.0333074650849915!GO:0006928;cell motility;0.0333074650849915!GO:0030308;negative regulation of cell growth;0.0342293566447959!GO:0007030;Golgi organization and biogenesis;0.0342762742297593!GO:0009165;nucleotide biosynthetic process;0.0343484954383017!GO:0005832;chaperonin-containing T-complex;0.0348248408155189!GO:0006026;aminoglycan catabolic process;0.034846793994809!GO:0006027;glycosaminoglycan catabolic process;0.034846793994809!GO:0051287;NAD binding;0.0352792277613516!GO:0007006;mitochondrial membrane organization and biogenesis;0.0353351813679524!GO:0030880;RNA polymerase complex;0.0353744191575436!GO:0003779;actin binding;0.0358534976412911!GO:0015992;proton transport;0.0358871273077618!GO:0046966;thyroid hormone receptor binding;0.0360118726800361!GO:0003756;protein disulfide isomerase activity;0.0367709366203003!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0367709366203003!GO:0000278;mitotic cell cycle;0.0369866025144832!GO:0016311;dephosphorylation;0.0375617608121027!GO:0006693;prostaglandin metabolic process;0.0376157538462659!GO:0006692;prostanoid metabolic process;0.0376157538462659!GO:0043560;insulin receptor substrate binding;0.0376929087278037!GO:0005938;cell cortex;0.0385448258639979!GO:0016584;nucleosome positioning;0.0388225504192534!GO:0051128;regulation of cellular component organization and biogenesis;0.0395307743031214!GO:0043284;biopolymer biosynthetic process;0.0395962474279493!GO:0000059;protein import into nucleus, docking;0.0396352533417095!GO:0043433;negative regulation of transcription factor activity;0.0397439216660009!GO:0006984;ER-nuclear signaling pathway;0.0398585129087543!GO:0060090;molecular adaptor activity;0.0401980582812452!GO:0008637;apoptotic mitochondrial changes;0.0402365158891733!GO:0003746;translation elongation factor activity;0.0403861311161595!GO:0010468;regulation of gene expression;0.0403861311161595!GO:0046489;phosphoinositide biosynthetic process;0.0404738995355945!GO:0005925;focal adhesion;0.0406736119214129!GO:0015036;disulfide oxidoreductase activity;0.0408547695801487!GO:0051329;interphase of mitotic cell cycle;0.0409221771401589!GO:0030155;regulation of cell adhesion;0.0424667826521537!GO:0046519;sphingoid metabolic process;0.0428294196302192!GO:0008320;protein transmembrane transporter activity;0.0428294196302192!GO:0001527;microfibril;0.0429226766670916!GO:0006518;peptide metabolic process;0.0429226766670916!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0433977156874016!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0433977156874016!GO:0015002;heme-copper terminal oxidase activity;0.0433977156874016!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0433977156874016!GO:0004129;cytochrome-c oxidase activity;0.0433977156874016!GO:0042994;cytoplasmic sequestering of transcription factor;0.0435715360630438!GO:0004721;phosphoprotein phosphatase activity;0.0435771408293168!GO:0019838;growth factor binding;0.0438325738160103!GO:0030032;lamellipodium biogenesis;0.0461137021639229!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0461322299088787!GO:0050811;GABA receptor binding;0.0462880497443592!GO:0006334;nucleosome assembly;0.046482319059245!GO:0030031;cell projection biogenesis;0.0475075472077262!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0476082005659853!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0476082005659853!GO:0006354;RNA elongation;0.0481238918402925!GO:0005784;translocon complex;0.0486761547986996!GO:0006701;progesterone biosynthetic process;0.0499222555374333
|sample_id=12240
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=chorion
|top_motifs=NKX2-1,4:2.26814339562;EP300:2.21924163455;HMX1:2.06347404371;UFEwm:1.95381577387;FOXL1:1.81299465544;IKZF1:1.80428687345;TBP:1.71079587481;STAT2,4,6:1.58561133193;SNAI1..3:1.56545158888;FOXO1,3,4:1.55284775736;RORA:1.5211736619;FOXM1:1.50817244524;FOX{D1,D2}:1.43133931365;GZF1:1.30628910101;BPTF:1.24010809959;GCM1,2:1.23043272391;EBF1:1.214529136;T:1.13259325945;HOXA9_MEIS1:1.09249897285;AR:1.08159231628;HIF1A:1.07868194363;EVI1:1.04556665299;PAX4:1.04372897535;EN1,2:1.04040397822;IRF7:0.985129877356;TBX4,5:0.981179186657;ALX4:0.968274726851;TLX2:0.950107435593;SMAD1..7,9:0.89463098363;CDC5L:0.875660188651;TEAD1:0.871045864307;RXRA_VDR{dimer}:0.865837147583;FOXP3:0.794499785755;MAFB:0.789578915805;XCPE1{core}:0.779966501305;IRF1,2:0.765057342822;AIRE:0.718724048471;HSF1,2:0.693512233342;SPZ1:0.673640059266;HMGA1,2:0.637078037087;HLF:0.594155276833;ZBTB16:0.564177582814;ZEB1:0.547130168572;MYBL2:0.543823874552;GLI1..3:0.537896049116;POU3F1..4:0.526990387636;KLF4:0.513352800083;PAX1,9:0.502332014245;POU2F1..3:0.497016607247;TFAP2{A,C}:0.472237045642;NKX3-2:0.467494726068;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.466461863589;SOX5:0.448633778001;ARID5B:0.409971463919;ZNF148:0.401383973414;TP53:0.341505731536;GATA6:0.332600916587;ONECUT1,2:0.321473226365;NR6A1:0.319548246249;FOS_FOS{B,L1}_JUN{B,D}:0.312073302743;BACH2:0.281802187824;PPARG:0.269580262161;SRF:0.268747853172;ZBTB6:0.264754131952;NKX2-2,8:0.246082841813;MED-1{core}:0.241042559506;ESR1:0.232563977717;bHLH_family:0.217195501921;SP1:0.206616506137;FOXN1:0.194764707326;MYOD1:0.178493234517;ATF6:0.174187770384;POU1F1:0.158838521336;NFKB1_REL_RELA:0.153279847264;ZNF238:0.14161408756;NFIL3:0.129765065257;FOSL2:0.127464612161;IKZF2:0.0897318809261;RXR{A,B,G}:0.087406985661;MAZ:0.0850174610345;SPI1:0.0811765940092;STAT1,3:0.073164294;ETS1,2:0.0500858676584;GATA4:0.0402293752865;HOX{A4,D4}:0.0309832165727;PRDM1:0.0208055297304;PAX2:0.00877069651787;MTE{core}:-0.00684878206289;HOX{A6,A7,B6,B7}:-0.0106100063383;PAX3,7:-0.0141834324317;NKX3-1:-0.0179250604255;HNF1A:-0.0494673494362;FOXQ1:-0.060142744369;XBP1:-0.0610326062512;SPIB:-0.0634640415936;GTF2I:-0.0683702329794;RUNX1..3:-0.0737630043156;TFAP4:-0.0748954045735;JUN:-0.100360934712;ZNF384:-0.100721532266;CEBPA,B_DDIT3:-0.125116313544;ZNF423:-0.138922950196;TFCP2:-0.139565795807;NANOG{mouse}:-0.141554789754;DBP:-0.151013735962;PAX8:-0.186313068248;NFE2:-0.205545798664;NR1H4:-0.211302388894;NFATC1..3:-0.226093697213;PATZ1:-0.231267819708;HNF4A_NR2F1,2:-0.231795206429;SOX17:-0.259784044607;OCT4_SOX2{dimer}:-0.29643254572;SREBF1,2:-0.321354307198;CREB1:-0.326017993405;TAL1_TCF{3,4,12}:-0.377872900314;NR3C1:-0.380795991072;HAND1,2:-0.384885122559;ELF1,2,4:-0.392061613138;TOPORS:-0.405736815145;ATF4:-0.427153989149;TEF:-0.452952105419;ATF2:-0.45798852593;TLX1..3_NFIC{dimer}:-0.464542041611;MYFfamily:-0.486228870303;POU6F1:-0.490599953735;MEF2{A,B,C,D}:-0.492292553359;ATF5_CREB3:-0.503179314789;TFAP2B:-0.503725430782;MTF1:-0.532094735172;FOX{I1,J2}:-0.539665826804;ZIC1..3:-0.54140654104;ZFP161:-0.545269138959;HIC1:-0.566519389586;DMAP1_NCOR{1,2}_SMARC:-0.605107174564;REST:-0.611297537959;EGR1..3:-0.627715089487;FOXD3:-0.632267821823;HES1:-0.633604846333;RREB1:-0.65426968149;FOX{F1,F2,J1}:-0.66299846474;MZF1:-0.675083688009;CDX1,2,4:-0.685167362619;RFX2..5_RFXANK_RFXAP:-0.68915560161;ELK1,4_GABP{A,B1}:-0.693566509402;GTF2A1,2:-0.705236981521;PAX6:-0.722188305834;STAT5{A,B}:-0.770513165331;TGIF1:-0.784518301017;NFE2L1:-0.793464390256;HOX{A5,B5}:-0.833615260491;RFX1:-0.841226618191;HBP1_HMGB_SSRP1_UBTF:-0.843852301419;NFE2L2:-0.851743017568;ESRRA:-0.863993369336;CUX2:-0.907754939158;PDX1:-0.913205400546;PAX5:-0.918001559931;VSX1,2:-0.92814905498;LMO2:-0.935148864446;AHR_ARNT_ARNT2:-0.944743456856;E2F1..5:-0.953078947619;ALX1:-0.968014647978;NHLH1,2:-0.981596576301;GFI1B:-1.01984318362;LEF1_TCF7_TCF7L1,2:-1.0257812254;ZNF143:-1.03537137585;NFY{A,B,C}:-1.09862429486;SOX2:-1.12180906441;NRF1:-1.13667208926;MYB:-1.15864520908;GFI1:-1.16125930554;FOXP1:-1.16664004359;SOX{8,9,10}:-1.24015574208;PITX1..3:-1.25271078539;NFIX:-1.36774345967;NKX2-3_NKX2-5:-1.42845948715;PRRX1,2:-1.44765852392;BREu{core}:-1.45898106034;YY1:-1.45995466856;RBPJ:-1.54394688303;FOXA2:-1.55703863894;PBX1:-1.56144466078;ADNP_IRX_SIX_ZHX:-1.56499472558;NR5A1,2:-1.64055019847;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.68011478333;LHX3,4:-1.78405853562;TFDP1:-1.80455850369;CRX:-2.12749331887;POU5F1:-2.1726388458;NANOG:-2.36988958196;NKX6-1,2:-2.67279176287
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12240-129G8;search_select_hide=table117:FF:12240-129G8
}}
}}

Latest revision as of 18:36, 4 June 2020

Name:chorionic membrane cells, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12380
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuechorion
dev stageNA
sexNA
ageNA
cell typeunclassifiable
cell lineNA
companyNA
collaborationHiroo Toyoda (Tokyo University of Pharm and life sciences)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004848
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12380 CAGE DRX008542 DRR009414
Accession ID Hg19

Library idBAMCTSS
CNhs12380 DRZ000839 DRZ002224
Accession ID Hg38

Library idBAMCTSS
CNhs12380 DRZ012189 DRZ013574
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004848
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10013.TTAGGC sRNA-Seq DRX037204 DRR041570
Accession ID Hg19

Library idBAMCTSS
SRhi10013.TTAGGC DRZ007212


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.203
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.291
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.186
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.186
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.186
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes1.962
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.111
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.224
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.315
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.711
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.885
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.415
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.315
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue1.699
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.304
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.186
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.623
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.186
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.186
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD41.105
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.00295
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.483
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.415
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0.365
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.186
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.157
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic1.359
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma1.305
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.186
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0.186
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.186
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal2.03
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12380

Jaspar motifP-value
MA0002.20.927
MA0003.10.251
MA0004.10.417
MA0006.10.293
MA0007.10.322
MA0009.10.835
MA0014.10.289
MA0017.10.484
MA0018.20.042
MA0019.10.0618
MA0024.10.00192
MA0025.10.674
MA0027.10.91
MA0028.10.0676
MA0029.10.484
MA0030.10.526
MA0031.10.0615
MA0035.20.972
MA0038.10.0229
MA0039.20.642
MA0040.10.825
MA0041.10.818
MA0042.10.958
MA0043.10.0231
MA0046.10.0555
MA0047.20.0251
MA0048.10.477
MA0050.10.0741
MA0051.10.187
MA0052.10.403
MA0055.10.548
MA0057.10.509
MA0058.10.466
MA0059.10.822
MA0060.18.64811e-8
MA0061.10.202
MA0062.20.00168
MA0065.20.0423
MA0066.10.125
MA0067.10.149
MA0068.10.198
MA0069.10.99
MA0070.10.824
MA0071.10.967
MA0072.10.541
MA0073.10.883
MA0074.10.312
MA0076.10.00564
MA0077.10.258
MA0078.10.787
MA0079.20.332
MA0080.20.673
MA0081.10.407
MA0083.10.654
MA0084.10.934
MA0087.10.768
MA0088.10.446
MA0090.13.94883e-4
MA0091.10.232
MA0092.10.207
MA0093.10.296
MA0099.20.0162
MA0100.10.171
MA0101.10.821
MA0102.20.772
MA0103.10.00217
MA0104.20.206
MA0105.10.0212
MA0106.10.301
MA0107.10.452
MA0108.20.00279
MA0111.10.349
MA0112.24.53127e-4
MA0113.10.169
MA0114.10.0957
MA0115.10.453
MA0116.10.00936
MA0117.10.956
MA0119.10.487
MA0122.10.861
MA0124.10.916
MA0125.10.715
MA0131.10.759
MA0135.10.0965
MA0136.10.136
MA0137.20.524
MA0138.20.658
MA0139.10.205
MA0140.10.972
MA0141.10.765
MA0142.10.0606
MA0143.10.205
MA0144.10.0142
MA0145.10.0499
MA0146.10.484
MA0147.10.575
MA0148.10.0612
MA0149.10.661
MA0150.10.791
MA0152.10.0584
MA0153.10.955
MA0154.10.00908
MA0155.10.35
MA0156.10.12
MA0157.10.147
MA0159.10.0457
MA0160.10.618
MA0162.10.0907
MA0163.10.0121
MA0164.10.52
MA0258.10.0679
MA0259.10.891



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12380

Novel motifP-value
10.149
100.344
1000.956
1010.514
1020.597
1030.0413
1040.789
1050.418
1060.00651
1070.0105
1080.104
1090.0394
110.193
1100.067
1110.427
1120.108
1130.00221
1140.072
1150.814
1160.39
1170.0826
1180.0569
1190.0695
120.345
1200.0139
1210.832
1220.279
1230.187
1240.359
1250.566
1260.293
1270.542
1280.144
1290.272
130.124
1300.0733
1310.483
1320.202
1330.274
1340.21
1350.487
1360.229
1370.742
1380.398
1390.331
140.93
1400.714
1410.967
1420.381
1430.856
1440.661
1450.201
1460.43
1470.378
1480.457
1490.103
150.156
1500.174
1510.309
1520.0769
1530.471
1540.833
1550.32
1560.691
1570.55
1580.157
1590.72
160.0503
1600.136
1610.52
1620.623
1630.641
1640.236
1650.228
1660.802
1670.872
1680.57
1690.0163
170.0534
180.246
190.0646
20.431
200.89
210.763
220.282
230.00946
240.946
250.664
260.153
270.253
280.841
290.151
30.132
300.266
310.494
320.00688
330.417
340.81
350.439
360.521
370.146
380.503
390.284
40.706
400.069
410.774
420.908
430.14
440.0449
450.276
460.118
470.746
480.451
490.365
50.258
500.618
510.388
520.3
530.491
540.739
550.0469
560.749
570.251
580.73
590.0554
60.77
600.048
610.853
620.3
630.423
640.426
650.0883
660.103
670.648
680.73
690.513
70.21
700.0116
710.105
720.326
730.126
740.849
750.157
760.79
770.032
780.314
790.143
80.218
800.831
810.438
820.0857
830.548
840.127
850.00658
860.924
870.354
880.606
890.0806
90.477
900.51
910.375
920.23
930.96
940.125
950.398
960.95
970.194
980.441
990.446



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12380


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000349 (extraembryonic cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002541 (chorionic membrane mesenchymal stem cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0005631 (extraembryonic membrane)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000476 (acellular anatomical structure)
0000478 (extraembryonic structure)
0000158 (membranous layer)
0003124 (chorion)
0000920 (egg chorion)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000038 (human chorionic membrane stem cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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