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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001013,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=CAGE@SAMD00005522
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002570
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005522
|accession_numbers=CAGE;DRX008607;DRR009479;DRZ000904;DRZ002289;DRZ012254;DRZ013639
|accession_numbers_RNASeq=sRNA-Seq;DRX036542;DRR040596;DRZ006961
|ancestors_in_anatomy_facet=UBERON:0001013,UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002570
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000350,FF:0000344,FF:0000329,FF:0000096,FF:0000690
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|donor= biol_rep3
|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.99!108.77!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.89!76.44!HOXC5;;chr7:19157248..19157268,-!p1@TWIST1!1.80!164.33!TWIST1;;chr1:170633348..170633399,+!p2@PRRX1!1.75!73.75!PRRX1;;chr9:132427883..132427951,+!p2@PRRX2!1.65!43.44!PRRX2;;chr1:170633262..170633285,+!p3@PRRX1!1.62!46.81!PRRX1;;chr9:132427972..132428056,+!p1@PRRX2!1.53!42.43!PRRX2;;chr15:57511609..57511651,+!p2@TCF12!1.50!51.19!TCF12;;chr12:54402745..54402788,+!p1@HOXC8!1.50!30.98!HOXC8;;chr11:46299199..46299233,+!p1@CREB3L1!1.43!130.32!CREB3L1;;chr2:239756671..239756732,+!p1@TWIST2!1.43!80.82!TWIST2;;chr17:1959369..1959388,+!p2@HIC1!1.43!67.01!HIC1;;chr19:13134772..13134822,+!p2@NFIX!1.42!37.04!NFIX;;chr1:170633058..170633084,+!p5@PRRX1!1.40!23.91!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!1.39!23.57!PRRX1;;chr12:54393880..54393962,+!p1@HOXC9!1.36!21.89!HOXC9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.31!19.19!HOXC5;;chr1:170632959..170632987,+!p4@PRRX1!1.30!20.88!PRRX1;;chr10:131762504..131762555,-!p1@EBF3!1.28!17.85!EBF3;;chr10:119303078..119303169,+!p2@EMX2!1.27!17.51!EMX2;;chr6:1312325..1312340,+!p1@FOXQ1!1.25!26.94!FOXQ1;;chr10:119302645..119302712,+!p3@EMX2!1.23!16.16!EMX2;;chr1:170632439..170632465,+!p11@PRRX1!1.23!15.83!PRRX1;;chr2:119605214..119605230,-!p1@EN1!1.20!14.82!EN1;;chr7:15726296..15726315,-!p1@MEOX2!1.20!14.82!MEOX2;;chr8:25902876..25902936,-!p1@EBF2!1.18!14.14!EBF2;;chr11:46299539..46299620,+!p2@CREB3L1!1.17!23.24!CREB3L1;;chr4:111558135..111558198,-!p2@PITX2!1.16!13.47!PITX2;;chr2:239756739..239756755,+!p2@TWIST2!1.14!21.89!TWIST2;;chr5:72744594..72744609,-!p1@FOXD1!1.11!54.89!FOXD1;;chr4:174451370..174451387,-!p1@HAND2!1.10!11.45!HAND2;;chr2:176994408..176994492,+!p1@HOXD8!1.07!10.78!HOXD8;;chr4:174450089..174450153,-!p2@HAND2!1.06!10.44!HAND2;;chr1:170632723..170632739,+!p8@PRRX1!1.06!10.44!PRRX1;;chr12:54379029..54379057,+!p2@HOXC10!1.06!10.44!HOXC10;;chr8:49833948..49833973,-!p2@SNAI2!1.04!64.32!SNAI2;;chr7:15726243..15726293,-!p2@MEOX2!1.02!9.43!MEOX2;;chr7:27205136..27205164,-!p1@HOXA9!1.02!9.43!HOXA9;;chr8:49833978..49833996,-!p1@SNAI2!1.01!193.63!SNAI2;;chr5:321810..321877,+!p1@AHRR!1.01!29.97!AHRR;;chr6:1389789..1389821,+!p1@FOXF2!1.00!12.46!FOXF2;;chrY:21906594..21906622,-!p1@KDM5D!1.00!9.09!KDM5D;;chr1:170632250..170632277,+!p7@PRRX1!1.00!9.09!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!1.00!9.09!PRRX1;;chr12:53614115..53614154,-!p1@RARG!0.99!47.48!RARG;;chr19:13135582..13135600,+!p3@NFIX!0.99!8.76!NFIX;;chr11:65686802..65686818,+!p6@DRAP1!0.98!15.15!DRAP1;;chr17:1958388..1958404,+!p1@HIC1!0.97!55.23!HIC1;;chr14:24837368..24837401,+!p1@NFATC4!0.97!20.20!NFATC4;;chr12:54378923..54378966,+!p1@HOXC10!0.97!8.42!HOXC10;;chr7:44143925..44143970,+!p1@AEBP1!0.96!185.55!AEBP1;;chr15:57511589..57511608,+!p4@TCF12!0.96!8.08!TCF12;;chr19:50432453..50432468,+!p1@ATF5!0.94!447.88!ATF5;;chr14:61116183..61116208,-!p1@SIX1!0.94!30.31!SIX1;;chr17:46682321..46682362,-!p1@HOXB6!0.94!7.75!HOXB6;;chr18:22932080..22932170,-!p1@ZNF521!0.92!31.99!ZNF521;;chr6:45296048..45296082,+!p1@RUNX2!0.92!8.42!RUNX2;;chr7:27192185..27192209,-!p1@HOXA3!0.92!7.41!HOXA3;;chr12:54402729..54402743,+!p3@HOXC8!0.92!7.41!HOXC8;;chr12:54402790..54402805,+!p2@HOXC8!0.92!7.41!HOXC8;;chr7:42276787..42276815,-!p1@GLI3!0.91!19.53!GLI3;;chr5:158526917..158526932,-!p1@EBF1!0.91!18.52!EBF1;;chr19:47523058..47523114,+!p1@NPAS1!0.91!7.07!NPAS1;;chr1:170632137..170632172,+!p10@PRRX1!0.91!7.07!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!0.89!19.19!OSR1;;chr10:119302508..119302559,+!p5@EMX2!0.89!6.73!EMX2;;chr18:72922743..72922761,+!p3@TSHZ1!0.88!22.56!TSHZ1;;chr7:19157043..19157088,-!p2@TWIST1!0.88!17.17!TWIST1;;chr5:142780189..142780223,-!p6@NR3C1!0.85!6.06!NR3C1;;chr1:170632115..170632136,+!p9@PRRX1!0.85!6.06!PRRX1;;chr1:23696308..23696339,-!p2@ZNF436!0.83!12.80!ZNF436;;chr7:27205106..27205134,-!p2@HOXA9!0.83!5.72!HOXA9;;chr2:102091566..102091581,-!p1@RFX8!0.83!5.72!RFX8;;chr12:54380404..54380433,+!p3@HOXC10!0.83!5.72!HOXC10;;chr10:77161504..77161530,-!p1@ZNF503!0.82!81.49!ZNF503;;chr17:46621937..46621966,-!p2@HOXB2!0.82!16.16!HOXB2;;chr19:13134457..13134462,+!p5@NFIX!0.81!10.10!NFIX;;chr7:44143997..44144008,+!p3@AEBP1!0.81!7.07!AEBP1;;chr17:46690839..46690884,-!p1@HOXB8!0.81!5.39!HOXB8;;chr1:170632310..170632321,+!p15@PRRX1!0.81!5.39!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.81!5.39!PRRX1;;chr2:85981107..85981120,+!p3@ATOH8!0.81!5.39!ATOH8;;chr5:133450365..133450444,+!p1@TCF7!0.80!26.27!TCF7;;chr9:110250697..110250738,-!p2@KLF4!0.80!6.40!KLF4;;chr18:53068911..53068935,-!p4@TCF4!0.80!6.06!TCF4;;chr15:96876966..96877017,+!p12@NR2F2!0.79!7.75!NR2F2;;chr8:77593474..77593612,+!p1@ZFHX4!0.78!22.90!ZFHX4;;chr12:54394309..54394336,+!p2@HOXC9!0.78!5.05!HOXC9;;chrY:2803415..2803468,+!p1@ZFY!0.78!5.05!ZFY;;chr20:39317868..39317884,-!p1@MAFB!0.77!63.98!MAFB;;chr7:44143978..44143989,+!p2@AEBP1!0.77!9.43!AEBP1;;chr11:65687222..65687240,+!p7@DRAP1!0.77!6.40!DRAP1;;chr8:106330656..106330684,+!p1@ZFPM2!0.76!13.47!ZFPM2;;chr8:99956662..99956684,+!p1@OSR2!0.76!7.75!OSR2;;chr16:54320101..54320125,-!p4@IRX3!0.76!7.07!IRX3;;chr5:72743793..72743855,-!p4@FOXD1!0.76!5.72!FOXD1;;chr5:2751762..2751784,-!p1@IRX2!0.76!4.71!IRX2;;chr4:111544219..111544240,-!p1@PITX2!0.76!4.71!PITX2;;chr11:46333934..46333963,+!p5@CREB3L1!0.76!4.71!CREB3L1;;chr2:208030647..208030689,-!p1@KLF7!0.74!41.42!KLF7;;chr15:96874145..96874166,+!p7@NR2F2!0.74!9.09!NR2F2;;chr19:13106214..13106382,+!p1@NFIX!0.73!114.49!NFIX;;chr9:110252035..110252057,-!p1@KLF4!0.73!79.14!KLF4;;chr16:54320646..54320672,-!p2@IRX3!0.73!7.07!IRX3;;chr7:27196217..27196246,-!p2@HOXA7!0.73!4.38!HOXA7;;chr2:102091144..102091183,-!p2@RFX8!0.73!4.38!RFX8;;chr2:119604456..119604501,-!p2@EN1!0.73!4.38!EN1;;chr2:177001290..177001315,+!p1@HOXD3!0.73!4.38!HOXD3;;chr1:119530493..119530572,-!p1@TBX15!0.73!4.38!TBX15;;chr1:170632907..170632916,+!p22@PRRX1!0.73!4.38!PRRX1;;chr12:53625846..53625861,-!p6@RARG!0.73!4.38!RARG;;chr20:30193083..30193098,+!p1@ID1!0.72!389.28!ID1;;chr11:65687362..65687436,+!p3@DRAP1!0.72!21.55!DRAP1;;chr12:115121962..115121987,-!p1@TBX3!0.71!39.40!TBX3;;chr8:22550982..22550999,-!p1@EGR3!0.71!12.80!EGR3;;chr5:158526459..158526481,-!p2@EBF1!0.71!5.72!EBF1;;chr4:4861385..4861398,+!p1@MSX1!0.70!13.13!MSX1;;chr1:23696448..23696453,-!p5@ZNF436!0.70!5.05!ZNF436;;chr9:16870659..16870675,-!p2@BNC2!0.70!5.05!BNC2;;chr17:46675420..46675465,-!p3@HOXB6!0.70!4.71!HOXB6;;chr14:95236440..95236465,-!p1@GSC!0.70!4.04!GSC;;chr7:27224842..27224872,-!p1@HOXA11!0.70!4.04!HOXA11;;chr12:54410948..54410992,+!p3@HOXC5!0.70!4.04!HOXC5;;chr2:223163706..223163730,-!p1@PAX3!0.70!4.04!PAX3;;chr14:75894714..75894733,+!p1@JDP2!0.69!127.29!JDP2;;chr10:63809013..63809041,+!p3@ARID5B!0.67!23.57!ARID5B;;chr11:65686732..65686756,+!p2@DRAP1!0.67!17.85!DRAP1;;chr10:77161533..77161546,-!p2@ZNF503!0.67!16.50!ZNF503;;chr8:72756667..72756736,-!p2@MSC!0.67!6.06!MSC;;chr3:157823517..157823562,-!p1@SHOX2!0.67!4.04!SHOX2;;chr8:93115274..93115323,-!p4@RUNX1T1!0.67!3.70!RUNX1T1;;chr9:130966497..130966541,-!p4@CIZ1!0.67!3.70!CIZ1;;chr10:119302232..119302265,+!p1@EMX2!0.67!3.70!EMX2;;chr16:54320302..54320317,-!p10@IRX3!0.67!3.70!IRX3;;chr17:46687935..46687950,-!p3@HOXB7!0.67!3.70!HOXB7;;chr1:170633100..170633112,+!p19@PRRX1!0.67!3.70!PRRX1;;chr14:62162285..62162296,+!p3@HIF1A!0.66!21.22!HIF1A;;chr3:150126759..150126784,+!p2@TSC22D2!0.66!18.52!TSC22D2;;chr1:158979872..158979898,+!p3@IFI16!0.66!12.46!IFI16;;chr17:46621101..46621143,-!p7@HOXB2!0.66!5.05!HOXB2;;chr17:46688334..46688385,-!p1@HOXB7!0.65!5.39!HOXB7;;chr19:45260775..45260838,+!p5@BCL3!0.65!4.71!BCL3;;chr1:23885981..23886002,-!p1@ID3!0.64!699.09!ID3;;chr14:62162258..62162269,+!p2@HIF1A!0.64!38.39!HIF1A;;chr18:72922811..72922827,+!p1@TSHZ1!0.64!19.53!TSHZ1;;chr10:77161133..77161176,-!p3@ZNF503!0.64!8.08!ZNF503;;chr14:62213827..62213853,+!p6@HIF1A!0.64!5.05!HIF1A;;chr1:164528942..164528964,+!p11@PBX1!0.64!3.37!PBX1;;chr1:170632867..170632878,+!p21@PRRX1!0.64!3.37!PRRX1;;chrY:21906761..21906810,-!p2@KDM5D!0.64!3.37!KDM5D;;chr17:46132044..46132080,+!p4@NFE2L1!0.64!3.37!NFE2L1;;chr2:85981008..85981025,+!p7@ATOH8!0.64!3.37!ATOH8;;chr2:8822176..8822196,+!p1@ID2!0.63!546.88!ID2;;chr6:144329384..144329405,-!p1@PLAGL1!0.63!44.45!PLAGL1;;chr17:3571887..3571918,-!p2@TAX1BP3!0.63!43.10!TAX1BP3;;chr15:42749722..42749739,-!p2@ZFP106!0.63!6.40!ZFP106;;chr16:54964740..54964789,+!p1@IRX5!0.63!5.05!IRX5;;chr17:46687959..46688007,-!p2@HOXB7!0.63!4.71!HOXB7;;chr3:21792585..21792625,-!p2@ZNF385D!0.63!3.70!ZNF385D;;chr16:86600426..86600441,+!p1@FOXC2!0.62!8.76!FOXC2;;chr15:96869255..96869291,+!p6@NR2F2!0.62!6.40!NR2F2;;chr1:158969752..158969780,+!p6@IFI16!0.62!6.06!IFI16;;chr2:121493492..121493537,+!p2@GLI2!0.62!5.72!GLI2;;chr5:72744445..72744466,-!p2@FOXD1!0.62!5.72!FOXD1;;chr20:51588873..51588953,+!p1@TSHZ2!0.62!4.38!TSHZ2;;chr19:13136130..13136165,+!p6@NFIX!0.62!4.38!NFIX;;chr12:80085061..80085119,-!p6@PAWR!0.61!5.39!PAWR;;chr16:54320158..54320200,-!p5@IRX3!0.61!4.71!IRX3;;chr11:65687243..65687276,+!p8@DRAP1!0.61!4.38!DRAP1;;chr2:85980919..85980942,+!p4@ATOH8!0.61!3.37!ATOH8;;chr3:147111231..147111281,+!p3@ZIC1!0.61!3.03!ZIC1;;chr16:54319010..54319041,-!p8@IRX3!0.61!3.03!IRX3;;chr17:46688310..46688323,-!p4@HOXB7!0.61!3.03!HOXB7;;chr1:170632325..170632339,+!p24@PRRX1!0.61!3.03!PRRX1;;chr1:170632583..170632590,+!p26@PRRX1!0.61!3.03!PRRX1;;chr1:2985760..2985774,+!p1@PRDM16!0.61!3.03!PRDM16;;chr5:3595934..3595957,+!p2@IRX1!0.61!3.03!IRX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.61!3.03!CREB3L1;;chr1:164528410..164528428,+!p1@PBX1!0.60!26.94!PBX1;;chr14:64971014..64971044,+!p4@ZBTB1!0.60!5.39!ZBTB1;;chr2:85980951..85981004,+!p1@ATOH8!0.60!5.39!ATOH8;;chr15:37390482..37390572,-!p7@MEIS2!0.60!4.38!MEIS2;;chr15:96873984..96873999,+!p3@NR2F2!0.59!25.59!NR2F2;;chr16:54320675..54320715,-!p1@IRX3!0.59!7.07!IRX3;;chr1:164528911..164528940,+!p7@PBX1!0.59!4.71!PBX1;;chr11:12696071..12696086,+!p3@TEAD1!0.59!4.04!TEAD1;;chr11:46299186..46299195,+!p3@CREB3L1!0.59!3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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002570
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 45:
|fonse_treatment_closure=EFO:0000369,FF:0000329,FF:0000690,FF:13231-141I9
|fonse_treatment_closure=EFO:0000369,FF:0000329,FF:0000690,FF:13231-141I9
|has_quality=
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg38.nobarcode.ctss.bed.gz
|id=FF:13231-141I9
|id=FF:13231-141I9
|is_a=EFO:0002091;;FF:0000210;;FF:0000690
|is_a=EFO:0002091;;FF:0000690
|name=mesenchymal stem cells (adipose derived), adipogenic induction, 00hr00min, biol_rep3
|is_obsolete=
|library_id=CNhs13421
|library_id_phase_based=2:CNhs13421
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;13231
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10064.GGTAGC.13231
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;13231
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10064.GGTAGC.13231
|name=mesenchymal stem cells (adipose derived), adipogenic induction
|namespace=FANTOM5
|namespace=FANTOM5
|part_of=
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|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs13421,LSID1023,release014,COMPLETED
|profile_hcage=CNhs13421,LSID1023,release014,COMPLETED
|profile_rnaseq=,,,
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|rna_box=141
|rna_box=141
|rna_catalog_number=
|rna_catalog_number=
Line 54: Line 82:
|rna_sample_type=
|rna_sample_type=
|rna_tube_id=141I9
|rna_tube_id=141I9
|rna_weight_ug=5.00
|rna_weight_ug=5
|rnaseq_library_id=SRhi10064.GGTAGC
|sample_age=16
|sample_age=16
|sample_category=time courses
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_line=
Line 68: Line 98:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.53083791509848e-214!GO:0005737;cytoplasm;7.19512182790902e-183!GO:0043226;organelle;9.81252602563386e-167!GO:0043229;intracellular organelle;2.01674395661482e-166!GO:0043231;intracellular membrane-bound organelle;2.17204801613755e-163!GO:0043227;membrane-bound organelle;4.34185077165226e-163!GO:0044444;cytoplasmic part;7.25242544304326e-137!GO:0044422;organelle part;1.79163768161546e-122!GO:0044446;intracellular organelle part;4.19441190025774e-121!GO:0032991;macromolecular complex;2.00131625549212e-90!GO:0030529;ribonucleoprotein complex;6.57645172405849e-82!GO:0044237;cellular metabolic process;7.43271812841178e-79!GO:0044238;primary metabolic process;1.47943559837429e-78!GO:0043170;macromolecule metabolic process;1.84139584500375e-71!GO:0005515;protein binding;3.2579525211455e-71!GO:0005739;mitochondrion;1.77504426012313e-65!GO:0043233;organelle lumen;3.65796581593027e-63!GO:0031974;membrane-enclosed lumen;3.65796581593027e-63!GO:0003723;RNA binding;9.45283478250249e-59!GO:0044428;nuclear part;3.99485956905091e-55!GO:0005634;nucleus;9.39691892723442e-55!GO:0005840;ribosome;8.88660501808661e-53!GO:0006412;translation;1.88152659911706e-49!GO:0031090;organelle membrane;9.53464566832301e-49!GO:0003735;structural constituent of ribosome;2.01062167426983e-47!GO:0019538;protein metabolic process;3.07603635746929e-47!GO:0043234;protein complex;9.43443660849329e-45!GO:0016043;cellular component organization and biogenesis;4.4656156142298e-44!GO:0009058;biosynthetic process;3.08638234151734e-43!GO:0044429;mitochondrial part;1.79232422902631e-42!GO:0015031;protein transport;5.03043466034968e-42!GO:0044260;cellular macromolecule metabolic process;5.76311598177291e-42!GO:0044267;cellular protein metabolic process;9.96827012997525e-41!GO:0033279;ribosomal subunit;1.01356924249282e-40!GO:0044249;cellular biosynthetic process;2.1952868016343e-40!GO:0033036;macromolecule localization;2.55221291975158e-40!GO:0009059;macromolecule biosynthetic process;2.45984117109077e-39!GO:0006396;RNA processing;2.52196842353141e-39!GO:0005829;cytosol;3.27096931697364e-39!GO:0045184;establishment of protein localization;7.74973128915273e-39!GO:0008104;protein localization;6.88934470216419e-38!GO:0010467;gene expression;1.74200742418594e-35!GO:0031967;organelle envelope;3.60991450923644e-35!GO:0031975;envelope;6.29449994952853e-35!GO:0031981;nuclear lumen;2.06012468048075e-34!GO:0043283;biopolymer metabolic process;1.22351383385152e-33!GO:0046907;intracellular transport;1.26927987054963e-32!GO:0016071;mRNA metabolic process;3.40960962002166e-32!GO:0008380;RNA splicing;4.45476107646668e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.46591878314939e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.61409851625775e-29!GO:0065003;macromolecular complex assembly;4.37356481969119e-29!GO:0006886;intracellular protein transport;2.29359196066663e-28!GO:0006397;mRNA processing;1.04333141235756e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.98282859246776e-27!GO:0005740;mitochondrial envelope;2.92266577071469e-27!GO:0022607;cellular component assembly;1.35720718718561e-26!GO:0031966;mitochondrial membrane;9.88512531149365e-26!GO:0019866;organelle inner membrane;1.90012359239924e-25!GO:0043228;non-membrane-bound organelle;1.53422413155039e-24!GO:0043232;intracellular non-membrane-bound organelle;1.53422413155039e-24!GO:0006996;organelle organization and biogenesis;2.52423074518511e-24!GO:0005743;mitochondrial inner membrane;3.37546923060458e-24!GO:0044445;cytosolic part;1.80297213717652e-23!GO:0006119;oxidative phosphorylation;3.46939149895147e-22!GO:0005681;spliceosome;1.33394927597042e-21!GO:0005783;endoplasmic reticulum;1.86212499233422e-21!GO:0005654;nucleoplasm;3.48018950408049e-21!GO:0044455;mitochondrial membrane part;3.90545886071685e-21!GO:0006457;protein folding;4.79286074829806e-21!GO:0015934;large ribosomal subunit;5.63695515830767e-21!GO:0015935;small ribosomal subunit;8.87941440261082e-21!GO:0012505;endomembrane system;1.02759678080704e-19!GO:0051649;establishment of cellular localization;1.76124672305731e-19!GO:0051641;cellular localization;3.23259958564685e-19!GO:0022618;protein-RNA complex assembly;1.04987653472567e-18!GO:0048770;pigment granule;1.56087070135856e-18!GO:0042470;melanosome;1.56087070135856e-18!GO:0031980;mitochondrial lumen;4.20957723961919e-18!GO:0005759;mitochondrial matrix;4.20957723961919e-18!GO:0003676;nucleic acid binding;1.43254391870865e-17!GO:0044432;endoplasmic reticulum part;1.72783956819933e-17!GO:0005746;mitochondrial respiratory chain;2.56294306733145e-17!GO:0044451;nucleoplasm part;3.31418053666219e-17!GO:0051186;cofactor metabolic process;7.41917132565884e-17!GO:0006259;DNA metabolic process;1.24673635248092e-16!GO:0016462;pyrophosphatase activity;2.0725795070852e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.48094463667472e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.70826810656308e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;3.56232491374157e-16!GO:0008135;translation factor activity, nucleic acid binding;3.7974570580602e-16!GO:0000502;proteasome complex (sensu Eukaryota);4.87525672464966e-16!GO:0008134;transcription factor binding;6.80809477348399e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.05180018990838e-16!GO:0017111;nucleoside-triphosphatase activity;1.29814729381496e-15!GO:0005794;Golgi apparatus;1.46493823189196e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.75813793394847e-15!GO:0003954;NADH dehydrogenase activity;1.75813793394847e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.75813793394847e-15!GO:0016874;ligase activity;2.33127808834341e-15!GO:0043285;biopolymer catabolic process;2.59770388910147e-15!GO:0006605;protein targeting;7.70327552773441e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.32708720658953e-14!GO:0005761;mitochondrial ribosome;1.58511130286021e-14!GO:0000313;organellar ribosome;1.58511130286021e-14!GO:0044265;cellular macromolecule catabolic process;2.05121625537302e-14!GO:0000166;nucleotide binding;2.52582738321632e-14!GO:0048193;Golgi vesicle transport;3.0038671810665e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;3.03588104531071e-14!GO:0005730;nucleolus;3.94159724423106e-14!GO:0016070;RNA metabolic process;5.44076632676484e-14!GO:0009057;macromolecule catabolic process;5.87637807702834e-14!GO:0019941;modification-dependent protein catabolic process;5.87637807702834e-14!GO:0043632;modification-dependent macromolecule catabolic process;5.87637807702834e-14!GO:0051082;unfolded protein binding;7.2632706195134e-14!GO:0006512;ubiquitin cycle;7.36777352675525e-14!GO:0044257;cellular protein catabolic process;7.36777352675525e-14!GO:0030163;protein catabolic process;8.63706340651261e-14!GO:0006511;ubiquitin-dependent protein catabolic process;8.7892512612258e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.16138725484472e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.88514240520677e-13!GO:0045271;respiratory chain complex I;1.88514240520677e-13!GO:0005747;mitochondrial respiratory chain complex I;1.88514240520677e-13!GO:0006732;coenzyme metabolic process;1.89365986436937e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.99071533885986e-13!GO:0042773;ATP synthesis coupled electron transport;1.99071533885986e-13!GO:0003743;translation initiation factor activity;4.11956210748685e-13!GO:0044248;cellular catabolic process;4.89707409146629e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.08316046264993e-13!GO:0006413;translational initiation;6.6986549767086e-13!GO:0007049;cell cycle;1.71653193185529e-12!GO:0016192;vesicle-mediated transport;3.009845464866e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.09771533699608e-12!GO:0005793;ER-Golgi intermediate compartment;7.86513099526738e-12!GO:0005789;endoplasmic reticulum membrane;1.65014450128502e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;1.71125292491663e-11!GO:0000375;RNA splicing, via transesterification reactions;1.71125292491663e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.71125292491663e-11!GO:0009055;electron carrier activity;5.34180199928146e-11!GO:0006446;regulation of translational initiation;1.13350968737759e-10!GO:0003712;transcription cofactor activity;4.20861513371057e-10!GO:0009259;ribonucleotide metabolic process;6.26473882058474e-10!GO:0016491;oxidoreductase activity;8.77033293990037e-10!GO:0042254;ribosome biogenesis and assembly;1.11218473328347e-09!GO:0006163;purine nucleotide metabolic process;1.14328181135834e-09!GO:0008565;protein transporter activity;1.21961896293944e-09!GO:0032553;ribonucleotide binding;1.30885322865883e-09!GO:0032555;purine ribonucleotide binding;1.30885322865883e-09!GO:0017076;purine nucleotide binding;1.46628807440521e-09!GO:0009150;purine ribonucleotide metabolic process;1.51678638550525e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.53817738959626e-09!GO:0022402;cell cycle process;1.95184418667177e-09!GO:0006913;nucleocytoplasmic transport;2.85025500772547e-09!GO:0006974;response to DNA damage stimulus;3.56522809516399e-09!GO:0006164;purine nucleotide biosynthetic process;4.28000919049474e-09!GO:0048523;negative regulation of cellular process;4.62289483122116e-09!GO:0009260;ribonucleotide biosynthetic process;4.62554291065663e-09!GO:0051169;nuclear transport;5.17885727681707e-09!GO:0009152;purine ribonucleotide biosynthetic process;5.42036125919324e-09!GO:0005635;nuclear envelope;7.38501073661277e-09!GO:0043412;biopolymer modification;8.32265677561564e-09!GO:0008639;small protein conjugating enzyme activity;8.47802671919548e-09!GO:0009060;aerobic respiration;9.17568653470209e-09!GO:0012501;programmed cell death;9.52479127303078e-09!GO:0006366;transcription from RNA polymerase II promoter;9.55299304990602e-09!GO:0005788;endoplasmic reticulum lumen;9.68995476427816e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.00069100221954e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.01139740001404e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.50672670563193e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.50672670563193e-08!GO:0009141;nucleoside triphosphate metabolic process;1.50875972435225e-08!GO:0006915;apoptosis;1.61337530589499e-08!GO:0004842;ubiquitin-protein ligase activity;1.6386969608159e-08!GO:0031965;nuclear membrane;1.67243245508781e-08!GO:0016604;nuclear body;1.71123375865508e-08!GO:0030120;vesicle coat;1.92072701933347e-08!GO:0030662;coated vesicle membrane;1.92072701933347e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.37171316584679e-08!GO:0009056;catabolic process;2.45056429958821e-08!GO:0045333;cellular respiration;2.55533751352339e-08!GO:0006399;tRNA metabolic process;2.60611379266022e-08!GO:0019787;small conjugating protein ligase activity;2.67843828135685e-08!GO:0017038;protein import;3.03764954243494e-08!GO:0015986;ATP synthesis coupled proton transport;3.86893562005062e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.86893562005062e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.42110589567376e-08!GO:0044453;nuclear membrane part;5.02410424024291e-08!GO:0000278;mitotic cell cycle;5.07121318228486e-08!GO:0016887;ATPase activity;5.90243603686079e-08!GO:0008219;cell death;5.90243603686079e-08!GO:0016265;death;5.90243603686079e-08!GO:0006461;protein complex assembly;6.058090509138e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.31930020918673e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.31930020918673e-08!GO:0051188;cofactor biosynthetic process;7.89611355123471e-08!GO:0006464;protein modification process;7.98153755773068e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.98153755773068e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.54675042771966e-08!GO:0005524;ATP binding;9.28765037812331e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.28765037812331e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.28765037812331e-08!GO:0046034;ATP metabolic process;1.04344396215198e-07!GO:0042623;ATPase activity, coupled;1.10863046887764e-07!GO:0048475;coated membrane;1.2780845338374e-07!GO:0030117;membrane coat;1.2780845338374e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.56835266321528e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.56835266321528e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.56835266321528e-07!GO:0006099;tricarboxylic acid cycle;1.611429411382e-07!GO:0046356;acetyl-CoA catabolic process;1.611429411382e-07!GO:0032559;adenyl ribonucleotide binding;1.71201417445935e-07!GO:0051187;cofactor catabolic process;1.74878947755394e-07!GO:0044431;Golgi apparatus part;1.86703225827093e-07!GO:0048519;negative regulation of biological process;1.96059169426831e-07!GO:0043038;amino acid activation;2.00867123343695e-07!GO:0006418;tRNA aminoacylation for protein translation;2.00867123343695e-07!GO:0043039;tRNA aminoacylation;2.00867123343695e-07!GO:0016607;nuclear speck;2.21696459346415e-07!GO:0030554;adenyl nucleotide binding;2.23266447951716e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;2.26707910024047e-07!GO:0019829;cation-transporting ATPase activity;2.35904956826466e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.98319549076417e-07!GO:0016881;acid-amino acid ligase activity;3.00621141324085e-07!GO:0003924;GTPase activity;3.1158515730612e-07!GO:0009109;coenzyme catabolic process;3.21466278348779e-07!GO:0051726;regulation of cell cycle;3.75739823766001e-07!GO:0000074;regulation of progression through cell cycle;4.03473688123759e-07!GO:0006281;DNA repair;4.16036768578274e-07!GO:0006084;acetyl-CoA metabolic process;4.42286358585668e-07!GO:0065002;intracellular protein transport across a membrane;4.5357441274696e-07!GO:0009719;response to endogenous stimulus;5.62445114951585e-07!GO:0006754;ATP biosynthetic process;5.68625133439894e-07!GO:0006753;nucleoside phosphate metabolic process;5.68625133439894e-07!GO:0005768;endosome;6.17742368903935e-07!GO:0006323;DNA packaging;6.44972634042333e-07!GO:0030532;small nuclear ribonucleoprotein complex;7.6874091216454e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.15743465444384e-07!GO:0065004;protein-DNA complex assembly;8.36215740641073e-07!GO:0051246;regulation of protein metabolic process;8.56249404535412e-07!GO:0003714;transcription corepressor activity;9.92751681379323e-07!GO:0051276;chromosome organization and biogenesis;1.11312721803222e-06!GO:0009117;nucleotide metabolic process;1.51430712106479e-06!GO:0043687;post-translational protein modification;1.74823376417566e-06!GO:0050794;regulation of cellular process;1.94399163132654e-06!GO:0004298;threonine endopeptidase activity;2.06703090611831e-06!GO:0008026;ATP-dependent helicase activity;2.44028542725254e-06!GO:0005643;nuclear pore;2.60316622498652e-06!GO:0006091;generation of precursor metabolites and energy;3.02003725414397e-06!GO:0031324;negative regulation of cellular metabolic process;3.10914268835549e-06!GO:0016564;transcription repressor activity;3.1092343216451e-06!GO:0016853;isomerase activity;3.11444710834529e-06!GO:0045259;proton-transporting ATP synthase complex;3.19406206242123e-06!GO:0004386;helicase activity;3.23148775634859e-06!GO:0009108;coenzyme biosynthetic process;3.41691601637569e-06!GO:0007005;mitochondrion organization and biogenesis;3.41875997292929e-06!GO:0006364;rRNA processing;4.08948247943237e-06!GO:0044440;endosomal part;4.88802328141558e-06!GO:0010008;endosome membrane;4.88802328141558e-06!GO:0008361;regulation of cell size;6.66535993802855e-06!GO:0043566;structure-specific DNA binding;6.75312631266766e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.09762382631454e-06!GO:0016072;rRNA metabolic process;7.17525968758921e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.77398846853938e-06!GO:0016049;cell growth;8.03470561690045e-06!GO:0051789;response to protein stimulus;8.03869491493538e-06!GO:0006986;response to unfolded protein;8.03869491493538e-06!GO:0003697;single-stranded DNA binding;8.25991784311605e-06!GO:0006333;chromatin assembly or disassembly;8.49184906543701e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.39094204790139e-06!GO:0000139;Golgi membrane;9.47971069045903e-06!GO:0005762;mitochondrial large ribosomal subunit;9.48525599180375e-06!GO:0000315;organellar large ribosomal subunit;9.48525599180375e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.00297775744233e-05!GO:0019843;rRNA binding;1.02038668571072e-05!GO:0006752;group transfer coenzyme metabolic process;1.03248190921593e-05!GO:0031988;membrane-bound vesicle;1.07351694320262e-05!GO:0000245;spliceosome assembly;1.17846897795305e-05!GO:0051170;nuclear import;1.23776699171746e-05!GO:0032446;protein modification by small protein conjugation;1.25786816433286e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.34158316609407e-05!GO:0005798;Golgi-associated vesicle;1.37415808588312e-05!GO:0000151;ubiquitin ligase complex;1.3841439692099e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.4501455728867e-05!GO:0005694;chromosome;1.58365517890669e-05!GO:0016859;cis-trans isomerase activity;1.63023646610787e-05!GO:0006606;protein import into nucleus;1.64672423884602e-05!GO:0031252;leading edge;1.67160830240501e-05!GO:0042981;regulation of apoptosis;1.74904017642298e-05!GO:0045454;cell redox homeostasis;1.78024580241192e-05!GO:0016567;protein ubiquitination;1.80653859643232e-05!GO:0043067;regulation of programmed cell death;1.816332818412e-05!GO:0046930;pore complex;1.86818375874058e-05!GO:0006613;cotranslational protein targeting to membrane;1.86818375874058e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.96463383411668e-05!GO:0005667;transcription factor complex;2.21727004782391e-05!GO:0045786;negative regulation of progression through cell cycle;2.30527342380286e-05!GO:0009892;negative regulation of metabolic process;2.76297215467794e-05!GO:0005770;late endosome;3.20779675599721e-05!GO:0016787;hydrolase activity;3.45064384685661e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.46797631676937e-05!GO:0008654;phospholipid biosynthetic process;3.52673376589532e-05!GO:0006334;nucleosome assembly;3.57666286763925e-05!GO:0006260;DNA replication;3.73204897371543e-05!GO:0043069;negative regulation of programmed cell death;3.82135026533779e-05!GO:0022403;cell cycle phase;3.86813158793596e-05!GO:0001558;regulation of cell growth;3.91264846108842e-05!GO:0006916;anti-apoptosis;4.03006143740138e-05!GO:0044427;chromosomal part;4.18605516109553e-05!GO:0005773;vacuole;4.54023322900603e-05!GO:0031982;vesicle;4.54023322900603e-05!GO:0005905;coated pit;4.84352552211682e-05!GO:0043066;negative regulation of apoptosis;4.97248596810864e-05!GO:0031410;cytoplasmic vesicle;5.19006510514336e-05!GO:0000087;M phase of mitotic cell cycle;5.32866040947868e-05!GO:0006403;RNA localization;5.71707992962034e-05!GO:0031497;chromatin assembly;5.76578165185746e-05!GO:0050657;nucleic acid transport;5.76578165185746e-05!GO:0051236;establishment of RNA localization;5.76578165185746e-05!GO:0050658;RNA transport;5.76578165185746e-05!GO:0007067;mitosis;5.76578165185746e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.78200335478791e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.27168086038704e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;7.33437336729368e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;9.16024127945432e-05!GO:0030133;transport vesicle;9.32329616254377e-05!GO:0000785;chromatin;9.32329616254377e-05!GO:0030867;rough endoplasmic reticulum membrane;9.65714172863147e-05!GO:0016481;negative regulation of transcription;9.81532288638828e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000104653554249964!GO:0043021;ribonucleoprotein binding;0.000109747376001525!GO:0015630;microtubule cytoskeleton;0.00013361525020979!GO:0030029;actin filament-based process;0.000151355727498243!GO:0005525;GTP binding;0.000153728644206886!GO:0005813;centrosome;0.000191932101794997!GO:0000323;lytic vacuole;0.000200476104892764!GO:0005764;lysosome;0.000200476104892764!GO:0033116;ER-Golgi intermediate compartment membrane;0.000207603323946904!GO:0000314;organellar small ribosomal subunit;0.00023226388092805!GO:0005763;mitochondrial small ribosomal subunit;0.00023226388092805!GO:0030663;COPI coated vesicle membrane;0.000241336410349304!GO:0030126;COPI vesicle coat;0.000241336410349304!GO:0016563;transcription activator activity;0.000256001210723461!GO:0019867;outer membrane;0.000279072816772559!GO:0005885;Arp2/3 protein complex;0.000279435937644409!GO:0006612;protein targeting to membrane;0.000283469647931662!GO:0050789;regulation of biological process;0.000288744583035415!GO:0003724;RNA helicase activity;0.000297047138162224!GO:0005048;signal sequence binding;0.000312828399870573!GO:0043623;cellular protein complex assembly;0.000347731160913246!GO:0003713;transcription coactivator activity;0.000347731160913246!GO:0007010;cytoskeleton organization and biogenesis;0.000377432250313245!GO:0008250;oligosaccharyl transferase complex;0.000380872839660413!GO:0031968;organelle outer membrane;0.000381310158314117!GO:0016568;chromatin modification;0.000389666821736406!GO:0016779;nucleotidyltransferase activity;0.000402177604252222!GO:0051301;cell division;0.000416923025793408!GO:0044262;cellular carbohydrate metabolic process;0.000432935558761507!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000495554773010251!GO:0005815;microtubule organizing center;0.000510622324674561!GO:0005769;early endosome;0.000543810431593547!GO:0019752;carboxylic acid metabolic process;0.000545099991170991!GO:0030137;COPI-coated vesicle;0.000584348014285832!GO:0008092;cytoskeletal protein binding;0.000592934112111552!GO:0006082;organic acid metabolic process;0.000596113288576068!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000603967265039723!GO:0004576;oligosaccharyl transferase activity;0.000642493345427916!GO:0006793;phosphorus metabolic process;0.00065158888855607!GO:0006796;phosphate metabolic process;0.00065158888855607!GO:0005791;rough endoplasmic reticulum;0.000658405506935168!GO:0009165;nucleotide biosynthetic process;0.000694461257083028!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000704680536237992!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000704680536237992!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000765122716111556!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000835506408716928!GO:0016310;phosphorylation;0.000897847105068183!GO:0051028;mRNA transport;0.000897847105068183!GO:0051920;peroxiredoxin activity;0.000902532954673177!GO:0032561;guanyl ribonucleotide binding;0.000916955698717707!GO:0019001;guanyl nucleotide binding;0.000916955698717707!GO:0043681;protein import into mitochondrion;0.000949383797015544!GO:0016740;transferase activity;0.000973468967833477!GO:0007050;cell cycle arrest;0.00103698087317076!GO:0046474;glycerophospholipid biosynthetic process;0.00103698087317076!GO:0006891;intra-Golgi vesicle-mediated transport;0.00104064658526078!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00107683310976912!GO:0051329;interphase of mitotic cell cycle;0.00107847729799217!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00114765801815619!GO:0018196;peptidyl-asparagine modification;0.00114822790178716!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00114822790178716!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00121959270230799!GO:0015399;primary active transmembrane transporter activity;0.00121959270230799!GO:0003899;DNA-directed RNA polymerase activity;0.00122315070190823!GO:0005741;mitochondrial outer membrane;0.00125161144131024!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00135625726547429!GO:0004177;aminopeptidase activity;0.00138893989188804!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00140037586358762!GO:0006626;protein targeting to mitochondrion;0.00155702164203548!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157759839607875!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157759839607875!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157759839607875!GO:0051325;interphase;0.00162924801802376!GO:0016126;sterol biosynthetic process;0.00176433847795274!GO:0043284;biopolymer biosynthetic process;0.00183184651213197!GO:0019222;regulation of metabolic process;0.00187117873755335!GO:0019899;enzyme binding;0.00191000543522599!GO:0051427;hormone receptor binding;0.00191752307367985!GO:0030658;transport vesicle membrane;0.00203047182279975!GO:0007243;protein kinase cascade;0.00205511268252962!GO:0048471;perinuclear region of cytoplasm;0.0021941688083244!GO:0008610;lipid biosynthetic process;0.00231327952699333!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0023166245549888!GO:0030132;clathrin coat of coated pit;0.00249227717989332!GO:0006414;translational elongation;0.00277654536937032!GO:0022890;inorganic cation transmembrane transporter activity;0.00280746966853125!GO:0051168;nuclear export;0.00283866861427681!GO:0048500;signal recognition particle;0.00297140019569402!GO:0040008;regulation of growth;0.00297895094186602!GO:0016044;membrane organization and biogenesis;0.00299930951309544!GO:0003690;double-stranded DNA binding;0.00303342698672896!GO:0048522;positive regulation of cellular process;0.00309785820780369!GO:0003729;mRNA binding;0.00325344187562749!GO:0008186;RNA-dependent ATPase activity;0.00325344187562749!GO:0000279;M phase;0.00325719333647501!GO:0006979;response to oxidative stress;0.00338925640753248!GO:0043433;negative regulation of transcription factor activity;0.00342251684985646!GO:0035257;nuclear hormone receptor binding;0.00360159573479862!GO:0045892;negative regulation of transcription, DNA-dependent;0.00365063775561247!GO:0008180;signalosome;0.00387505340269321!GO:0046489;phosphoinositide biosynthetic process;0.0038825520070146!GO:0006839;mitochondrial transport;0.00414725648049513!GO:0051087;chaperone binding;0.00461611205510592!GO:0030176;integral to endoplasmic reticulum membrane;0.00467494565725089!GO:0031072;heat shock protein binding;0.00477745039311788!GO:0015992;proton transport;0.00498220557440613!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00507290298173166!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00507290298173166!GO:0007006;mitochondrial membrane organization and biogenesis;0.00509558160553096!GO:0006383;transcription from RNA polymerase III promoter;0.0051336483984698!GO:0046483;heterocycle metabolic process;0.00513556319988372!GO:0005583;fibrillar collagen;0.00518519263736992!GO:0006818;hydrogen transport;0.00519131967643662!GO:0030134;ER to Golgi transport vesicle;0.00519131967643662!GO:0030027;lamellipodium;0.00544401252265816!GO:0043488;regulation of mRNA stability;0.00584769910205386!GO:0043487;regulation of RNA stability;0.00584769910205386!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00588080118139685!GO:0015002;heme-copper terminal oxidase activity;0.00588080118139685!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00588080118139685!GO:0004129;cytochrome-c oxidase activity;0.00588080118139685!GO:0051252;regulation of RNA metabolic process;0.00595840932555453!GO:0030660;Golgi-associated vesicle membrane;0.00601834461325149!GO:0031418;L-ascorbic acid binding;0.00613189334246932!GO:0008154;actin polymerization and/or depolymerization;0.00617122366123391!GO:0008652;amino acid biosynthetic process;0.00617122366123391!GO:0030659;cytoplasmic vesicle membrane;0.00619015919359757!GO:0030127;COPII vesicle coat;0.00623217759888208!GO:0012507;ER to Golgi transport vesicle membrane;0.00623217759888208!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00626473904389621!GO:0016197;endosome transport;0.0063206241829279!GO:0031543;peptidyl-proline dioxygenase activity;0.00650837107950062!GO:0017166;vinculin binding;0.00658432290291392!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00658432290291392!GO:0045047;protein targeting to ER;0.00658432290291392!GO:0030118;clathrin coat;0.006883903079946!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.006883903079946!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00689003712669233!GO:0006740;NADPH regeneration;0.00699629149024917!GO:0006098;pentose-phosphate shunt;0.00699629149024917!GO:0000786;nucleosome;0.00788168014479705!GO:0006520;amino acid metabolic process;0.00791064709983926!GO:0030880;RNA polymerase complex;0.00794753511684256!GO:0004004;ATP-dependent RNA helicase activity;0.0079516469253773!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00808616721948133!GO:0019798;procollagen-proline dioxygenase activity;0.00812516359936313!GO:0051128;regulation of cellular component organization and biogenesis;0.00826946574985781!GO:0006509;membrane protein ectodomain proteolysis;0.00846174208799086!GO:0033619;membrane protein proteolysis;0.00846174208799086!GO:0000049;tRNA binding;0.008642852435622!GO:0007040;lysosome organization and biogenesis;0.00864432160143192!GO:0051287;NAD binding;0.00864432160143192!GO:0046467;membrane lipid biosynthetic process;0.00864827419382595!GO:0003746;translation elongation factor activity;0.00886721165777465!GO:0000096;sulfur amino acid metabolic process;0.00895491382864864!GO:0044420;extracellular matrix part;0.00898271664277897!GO:0005869;dynactin complex;0.00907933881576978!GO:0065009;regulation of a molecular function;0.00913671945856376!GO:0006790;sulfur metabolic process;0.00932848103609495!GO:0048487;beta-tubulin binding;0.00942407789474422!GO:0000059;protein import into nucleus, docking;0.00951806258081682!GO:0008139;nuclear localization sequence binding;0.0103548873706628!GO:0008320;protein transmembrane transporter activity;0.0104629570062385!GO:0008312;7S RNA binding;0.0105287533685161!GO:0005819;spindle;0.0107068120610784!GO:0016408;C-acyltransferase activity;0.0110789754894286!GO:0001527;microfibril;0.0111122023577899!GO:0003711;transcription elongation regulator activity;0.0114584307024022!GO:0030041;actin filament polymerization;0.0116185626026954!GO:0016363;nuclear matrix;0.0117236314128725!GO:0044452;nucleolar part;0.0120462018865997!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.012123195317791!GO:0016272;prefoldin complex;0.0121454540026557!GO:0005581;collagen;0.0124101802671796!GO:0022884;macromolecule transmembrane transporter activity;0.0126758546459872!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0126758546459872!GO:0043022;ribosome binding;0.0131725416407042!GO:0006402;mRNA catabolic process;0.0131763117557881!GO:0008033;tRNA processing;0.013231978389076!GO:0005684;U2-dependent spliceosome;0.0132488317863195!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0134064465804391!GO:0030125;clathrin vesicle coat;0.0143817286008648!GO:0030665;clathrin coated vesicle membrane;0.0143817286008648!GO:0005862;muscle thin filament tropomyosin;0.0145711222133007!GO:0001726;ruffle;0.0145711222133007!GO:0015631;tubulin binding;0.0148538733248383!GO:0044433;cytoplasmic vesicle part;0.0150146097381759!GO:0031901;early endosome membrane;0.0152429447065568!GO:0006354;RNA elongation;0.0154458363002576!GO:0006650;glycerophospholipid metabolic process;0.0154985975304576!GO:0031902;late endosome membrane;0.0155718526635346!GO:0005586;collagen type III;0.0156312511962321!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0158617750494637!GO:0000428;DNA-directed RNA polymerase complex;0.0158617750494637!GO:0006778;porphyrin metabolic process;0.0164423025677585!GO:0033013;tetrapyrrole metabolic process;0.0164423025677585!GO:0051539;4 iron, 4 sulfur cluster binding;0.0166022550015532!GO:0032984;macromolecular complex disassembly;0.0166924044583587!GO:0050662;coenzyme binding;0.0167913672982341!GO:0031529;ruffle organization and biogenesis;0.0169434839703755!GO:0000339;RNA cap binding;0.0173841418395524!GO:0003779;actin binding;0.0178318399475076!GO:0006289;nucleotide-excision repair;0.0179762157991279!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0179818126966784!GO:0043492;ATPase activity, coupled to movement of substances;0.0180515947078861!GO:0006595;polyamine metabolic process;0.0180829342101528!GO:0030521;androgen receptor signaling pathway;0.0185498451025669!GO:0006118;electron transport;0.0191193482213507!GO:0007033;vacuole organization and biogenesis;0.0193570424194068!GO:0008047;enzyme activator activity;0.0199361032765317!GO:0000082;G1/S transition of mitotic cell cycle;0.0206249077153363!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.020914819388765!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0209530169964077!GO:0009112;nucleobase metabolic process;0.0211897504740258!GO:0003756;protein disulfide isomerase activity;0.0212308129661503!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0212308129661503!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0213360335438676!GO:0006693;prostaglandin metabolic process;0.0213360335438676!GO:0006692;prostanoid metabolic process;0.0213360335438676!GO:0051540;metal cluster binding;0.0214093093253987!GO:0051536;iron-sulfur cluster binding;0.0214093093253987!GO:0007021;tubulin folding;0.0220185621536722!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0223690013790246!GO:0006506;GPI anchor biosynthetic process;0.0228410512763837!GO:0065007;biological regulation;0.0228510146473415!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0232291730973663!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0232291730973663!GO:0006695;cholesterol biosynthetic process;0.0232291730973663!GO:0005832;chaperonin-containing T-complex;0.0234951167336225!GO:0035035;histone acetyltransferase binding;0.0237643175499082!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0242256011108199!GO:0042168;heme metabolic process;0.024907766189985!GO:0048037;cofactor binding;0.0254192159254171!GO:0006401;RNA catabolic process;0.0255893969976916!GO:0003684;damaged DNA binding;0.0255893969976916!GO:0030833;regulation of actin filament polymerization;0.0256145779176335!GO:0051101;regulation of DNA binding;0.0257060323125031!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0257060323125031!GO:0000209;protein polyubiquitination;0.0259603085685212!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0264810325324028!GO:0008632;apoptotic program;0.0267308673952067!GO:0031625;ubiquitin protein ligase binding;0.0267308673952067!GO:0006497;protein amino acid lipidation;0.0267308673952067!GO:0012506;vesicle membrane;0.0267308673952067!GO:0009116;nucleoside metabolic process;0.0268804779004214!GO:0031124;mRNA 3'-end processing;0.0270098140019562!GO:0006739;NADP metabolic process;0.0270671312728195!GO:0043624;cellular protein complex disassembly;0.027456396930061!GO:0042802;identical protein binding;0.0275963350269681!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0277546997858383!GO:0033043;regulation of organelle organization and biogenesis;0.0277546997858383!GO:0043241;protein complex disassembly;0.0277955977207904!GO:0003678;DNA helicase activity;0.029709529800364!GO:0048468;cell development;0.029709529800364!GO:0030145;manganese ion binding;0.0305168859304256!GO:0045045;secretory pathway;0.0305168859304256!GO:0031272;regulation of pseudopodium formation;0.0305168859304256!GO:0031269;pseudopodium formation;0.0305168859304256!GO:0031344;regulation of cell projection organization and biogenesis;0.0305168859304256!GO:0031268;pseudopodium organization and biogenesis;0.0305168859304256!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0305168859304256!GO:0031274;positive regulation of pseudopodium formation;0.0305168859304256!GO:0006505;GPI anchor metabolic process;0.0308441674335481!GO:0006352;transcription initiation;0.0308864187549032!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.031022178499324!GO:0008022;protein C-terminus binding;0.0311153683734827!GO:0030508;thiol-disulfide exchange intermediate activity;0.0314904032759958!GO:0045893;positive regulation of transcription, DNA-dependent;0.0316383460783849!GO:0016860;intramolecular oxidoreductase activity;0.0319890645074455!GO:0022408;negative regulation of cell-cell adhesion;0.0327991798300481!GO:0006007;glucose catabolic process;0.0333747136413638!GO:0004228;gelatinase A activity;0.0333961121423616!GO:0001955;blood vessel maturation;0.0333961121423616!GO:0007264;small GTPase mediated signal transduction;0.033972930689238!GO:0033673;negative regulation of kinase activity;0.033972930689238!GO:0006469;negative regulation of protein kinase activity;0.033972930689238!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.034495022033292!GO:0045792;negative regulation of cell size;0.0346953997813514!GO:0007034;vacuolar transport;0.0347153916645029!GO:0030503;regulation of cell redox homeostasis;0.0351574519320682!GO:0045941;positive regulation of transcription;0.0351574519320682!GO:0050811;GABA receptor binding;0.0353243258657565!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0353243258657565!GO:0030119;AP-type membrane coat adaptor complex;0.0356574447975846!GO:0015036;disulfide oxidoreductase activity;0.0358686973524719!GO:0030384;phosphoinositide metabolic process;0.0359418145821662!GO:0051059;NF-kappaB binding;0.0367469845588306!GO:0048144;fibroblast proliferation;0.0369369158528878!GO:0048145;regulation of fibroblast proliferation;0.0369369158528878!GO:0030308;negative regulation of cell growth;0.0379194450279954!GO:0006892;post-Golgi vesicle-mediated transport;0.0384423946065034!GO:0035258;steroid hormone receptor binding;0.0384423946065034!GO:0006611;protein export from nucleus;0.0387758825589667!GO:0030518;steroid hormone receptor signaling pathway;0.0390597494278482!GO:0005637;nuclear inner membrane;0.0392512242302021!GO:0006779;porphyrin biosynthetic process;0.0392974133110932!GO:0033014;tetrapyrrole biosynthetic process;0.0392974133110932!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0392987409053668!GO:0000097;sulfur amino acid biosynthetic process;0.0394600455710514!GO:0009967;positive regulation of signal transduction;0.0394600455710514!GO:0042158;lipoprotein biosynthetic process;0.0401950981647532!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0403078762319106!GO:0032981;mitochondrial respiratory chain complex I assembly;0.041148725349343!GO:0010257;NADH dehydrogenase complex assembly;0.041148725349343!GO:0033108;mitochondrial respiratory chain complex assembly;0.041148725349343!GO:0006950;response to stress;0.041148725349343!GO:0051348;negative regulation of transferase activity;0.0416607814212827!GO:0006261;DNA-dependent DNA replication;0.0419088055722737!GO:0046519;sphingoid metabolic process;0.0421057776617888!GO:0033559;unsaturated fatty acid metabolic process;0.0422327854285244!GO:0006636;unsaturated fatty acid biosynthetic process;0.0422327854285244!GO:0045936;negative regulation of phosphate metabolic process;0.0426037198629583!GO:0006376;mRNA splice site selection;0.0433726033241947!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0433726033241947!GO:0017134;fibroblast growth factor binding;0.0434230686428233!GO:0003702;RNA polymerase II transcription factor activity;0.0434230686428233!GO:0030032;lamellipodium biogenesis;0.0439067672508185!GO:0031371;ubiquitin conjugating enzyme complex;0.0447697994669347!GO:0009081;branched chain family amino acid metabolic process;0.0451925148776666!GO:0048518;positive regulation of biological process;0.0456101994356507!GO:0016251;general RNA polymerase II transcription factor activity;0.0458302685788304!GO:0009303;rRNA transcription;0.0465640385128814!GO:0030911;TPR domain binding;0.046743997466935!GO:0004448;isocitrate dehydrogenase activity;0.0470292357899986!GO:0001953;negative regulation of cell-matrix adhesion;0.0473501492684831!GO:0006144;purine base metabolic process;0.0475980390546436!GO:0006302;double-strand break repair;0.0477809528822484!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0479239216018814!GO:0006220;pyrimidine nucleotide metabolic process;0.0480472569926503!GO:0007030;Golgi organization and biogenesis;0.0481855239112427!GO:0048146;positive regulation of fibroblast proliferation;0.048494386952648!GO:0008538;proteasome activator activity;0.0486005906421423!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0489854708497967!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0489854708497967!GO:0006897;endocytosis;0.0492279940627764!GO:0010324;membrane invagination;0.0492279940627764
|sample_id=13231
|sample_id=13231
|sample_note=
|sample_note=
Line 74: Line 105:
|sample_strain=
|sample_strain=
|sample_tissue=
|sample_tissue=
|time= 00hr00min
|timecourse=MSC_to_adipocyte_(human)
|top_motifs=ZNF238:1.74841134209;HES1:1.69713616627;ALX4:1.68869206936;GFI1B:1.58155922062;PAX1,9:1.51891656227;NKX3-1:1.4634183501;ESR1:1.4520293071;XBP1:1.37083115082;HOX{A5,B5}:1.34958607167;UFEwm:1.29085239302;TAL1_TCF{3,4,12}:1.28876377855;GLI1..3:1.28288948786;MYBL2:1.20604242995;SRF:1.17508046898;TFAP4:1.15399442332;GZF1:1.12626370186;TLX1..3_NFIC{dimer}:1.10919378774;EVI1:1.10119332009;GCM1,2:1.04944953104;IKZF1:1.03536596007;SPZ1:0.965493696202;NR3C1:0.957807193639;TEAD1:0.936012658881;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.931670032431;ATF6:0.899943335516;HBP1_HMGB_SSRP1_UBTF:0.896556404543;RXR{A,B,G}:0.890685199086;NKX2-2,8:0.875733280527;MAFB:0.866585230847;ZIC1..3:0.75156661182;KLF4:0.749992277246;ZNF423:0.743092185903;NANOG{mouse}:0.741948538653;HOX{A6,A7,B6,B7}:0.735413401456;TP53:0.724379078977;RXRA_VDR{dimer}:0.705356447319;HOX{A4,D4}:0.678362966812;FOXL1:0.676431574161;GTF2I:0.666073451606;LHX3,4:0.653180185763;HMGA1,2:0.651453010069;NKX3-2:0.630254550573;HIF1A:0.600147736131;GTF2A1,2:0.599821242452;MZF1:0.578744149217;EBF1:0.558480478138;EN1,2:0.549725702925;PAX4:0.546826504949;RREB1:0.530984057777;ZNF384:0.529225831148;TFCP2:0.528090616902;TBP:0.524283183727;NR6A1:0.520022891116;YY1:0.49686568559;PATZ1:0.442383656849;HAND1,2:0.433104976047;PAX5:0.426509293702;NFE2L1:0.421727310813;CDC5L:0.421174235394;SOX17:0.415886065547;DBP:0.413826313294;GATA4:0.408296431186;NFATC1..3:0.401249670487;SMAD1..7,9:0.397390623791;TFAP2B:0.364344044421;ZBTB6:0.357375606899;NFE2L2:0.334956807894;NFIX:0.332548497736;ZNF148:0.326906559739;HSF1,2:0.320329250789;POU5F1:0.299007010147;HLF:0.266119047273;TFAP2{A,C}:0.249558529508;STAT2,4,6:0.246404136803;NKX6-1,2:0.237746353927;AHR_ARNT_ARNT2:0.237568050292;POU1F1:0.227570048465;MAZ:0.225378015023;PAX8:0.215760274797;POU3F1..4:0.199018392599;PRDM1:0.19639450192;MYFfamily:0.182211532906;ALX1:0.178811176002;CEBPA,B_DDIT3:0.165163807814;GFI1:0.163721949057;FOXP3:0.146481064571;bHLH_family:0.119671283086;NR1H4:0.0804239178855;HIC1:0.0643249320201;REST:0.0200413416534;DMAP1_NCOR{1,2}_SMARC:0.0127580612948;NR5A1,2:-0.0349095823755;MED-1{core}:-0.0459780037842;BACH2:-0.0510711932892;TFDP1:-0.0614329259898;MTE{core}:-0.0731215923499;MEF2{A,B,C,D}:-0.0789672792969;TOPORS:-0.0797230870114;EGR1..3:-0.0798153665334;HNF1A:-0.0905235029574;ELK1,4_GABP{A,B1}:-0.0925986221574;FOS_FOS{B,L1}_JUN{B,D}:-0.103951576731;MTF1:-0.120403681787;FOXM1:-0.125916313485;FOXO1,3,4:-0.131994124509;HMX1:-0.147353715541;FOSL2:-0.155558082732;NRF1:-0.157188381848;RUNX1..3:-0.160583096438;XCPE1{core}:-0.164548022278;IRF1,2:-0.17062672782;TBX4,5:-0.180799788177;ZNF143:-0.192128001407;NKX2-3_NKX2-5:-0.196005798047;FOXA2:-0.196696043148;PPARG:-0.196977702294;ADNP_IRX_SIX_ZHX:-0.197766492202;ONECUT1,2:-0.207420819808;NHLH1,2:-0.220344262944;TLX2:-0.227324893574;LEF1_TCF7_TCF7L1,2:-0.241067121851;CREB1:-0.257243816651;PAX6:-0.258885796989;PRRX1,2:-0.266254337914;SOX5:-0.284349653102;RFX1:-0.291115479721;BPTF:-0.304717415935;SREBF1,2:-0.312746477704;STAT1,3:-0.315280667412;AR:-0.37384363517;NFE2:-0.378335473617;SPI1:-0.425447286473;HNF4A_NR2F1,2:-0.426367179219;HOXA9_MEIS1:-0.427380557944;PDX1:-0.440568341983;NFKB1_REL_RELA:-0.468860224745;CUX2:-0.471395020119;FOXD3:-0.479784899345;SOX{8,9,10}:-0.491147405764;ZBTB16:-0.494765886232;ATF5_CREB3:-0.506929402207;MYB:-0.508524749115;SPIB:-0.532548456255;PAX2:-0.534679591251;OCT4_SOX2{dimer}:-0.543475786607;PAX3,7:-0.548094636399;E2F1..5:-0.548496604004;TGIF1:-0.553374236282;AIRE:-0.558752500004;T:-0.562452378681;SP1:-0.562466919291;NFIL3:-0.563816256283;ATF4:-0.57027380465;CDX1,2,4:-0.581443542734;JUN:-0.583570686304;TEF:-0.593173726311;ARID5B:-0.598380547567;FOXP1:-0.605761785045;VSX1,2:-0.609372266349;ELF1,2,4:-0.610646268852;IRF7:-0.613751356865;EP300:-0.622301427773;LMO2:-0.623485096801;ZFP161:-0.636091971832;SOX2:-0.637702909381;NKX2-1,4:-0.647218570704;IKZF2:-0.658664304964;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.664187677137;ETS1,2:-0.669347384546;PITX1..3:-0.690083990334;NANOG:-0.707545239876;POU6F1:-0.708939419715;FOX{D1,D2}:-0.713433835168;STAT5{A,B}:-0.728114227527;BREu{core}:-0.73816844652;NFY{A,B,C}:-0.740217895024;GATA6:-0.774975130743;FOX{I1,J2}:-0.775964730104;ESRRA:-0.798268040034;SNAI1..3:-0.845425745355;FOXN1:-0.891083696648;POU2F1..3:-0.892644748197;RFX2..5_RFXANK_RFXAP:-0.904662014124;ATF2:-1.0053854055;FOXQ1:-1.02881888698;ZEB1:-1.06228507006;RORA:-1.06546499334;CRX:-1.08686455397;PBX1:-1.22866278479;FOX{F1,F2,J1}:-1.24352909454;RBPJ:-1.41948176011;MYOD1:-2.03161471682
|top_motifs=ZNF238:1.74841134209;HES1:1.69713616627;ALX4:1.68869206936;GFI1B:1.58155922062;PAX1,9:1.51891656227;NKX3-1:1.4634183501;ESR1:1.4520293071;XBP1:1.37083115082;HOX{A5,B5}:1.34958607167;UFEwm:1.29085239302;TAL1_TCF{3,4,12}:1.28876377855;GLI1..3:1.28288948786;MYBL2:1.20604242995;SRF:1.17508046898;TFAP4:1.15399442332;GZF1:1.12626370186;TLX1..3_NFIC{dimer}:1.10919378774;EVI1:1.10119332009;GCM1,2:1.04944953104;IKZF1:1.03536596007;SPZ1:0.965493696202;NR3C1:0.957807193639;TEAD1:0.936012658881;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.931670032431;ATF6:0.899943335516;HBP1_HMGB_SSRP1_UBTF:0.896556404543;RXR{A,B,G}:0.890685199086;NKX2-2,8:0.875733280527;MAFB:0.866585230847;ZIC1..3:0.75156661182;KLF4:0.749992277246;ZNF423:0.743092185903;NANOG{mouse}:0.741948538653;HOX{A6,A7,B6,B7}:0.735413401456;TP53:0.724379078977;RXRA_VDR{dimer}:0.705356447319;HOX{A4,D4}:0.678362966812;FOXL1:0.676431574161;GTF2I:0.666073451606;LHX3,4:0.653180185763;HMGA1,2:0.651453010069;NKX3-2:0.630254550573;HIF1A:0.600147736131;GTF2A1,2:0.599821242452;MZF1:0.578744149217;EBF1:0.558480478138;EN1,2:0.549725702925;PAX4:0.546826504949;RREB1:0.530984057777;ZNF384:0.529225831148;TFCP2:0.528090616902;TBP:0.524283183727;NR6A1:0.520022891116;YY1:0.49686568559;PATZ1:0.442383656849;HAND1,2:0.433104976047;PAX5:0.426509293702;NFE2L1:0.421727310813;CDC5L:0.421174235394;SOX17:0.415886065547;DBP:0.413826313294;GATA4:0.408296431186;NFATC1..3:0.401249670487;SMAD1..7,9:0.397390623791;TFAP2B:0.364344044421;ZBTB6:0.357375606899;NFE2L2:0.334956807894;NFIX:0.332548497736;ZNF148:0.326906559739;HSF1,2:0.320329250789;POU5F1:0.299007010147;HLF:0.266119047273;TFAP2{A,C}:0.249558529508;STAT2,4,6:0.246404136803;NKX6-1,2:0.237746353927;AHR_ARNT_ARNT2:0.237568050292;POU1F1:0.227570048465;MAZ:0.225378015023;PAX8:0.215760274797;POU3F1..4:0.199018392599;PRDM1:0.19639450192;MYFfamily:0.182211532906;ALX1:0.178811176002;CEBPA,B_DDIT3:0.165163807814;GFI1:0.163721949057;FOXP3:0.146481064571;bHLH_family:0.119671283086;NR1H4:0.0804239178855;HIC1:0.0643249320201;REST:0.0200413416534;DMAP1_NCOR{1,2}_SMARC:0.0127580612948;NR5A1,2:-0.0349095823755;MED-1{core}:-0.0459780037842;BACH2:-0.0510711932892;TFDP1:-0.0614329259898;MTE{core}:-0.0731215923499;MEF2{A,B,C,D}:-0.0789672792969;TOPORS:-0.0797230870114;EGR1..3:-0.0798153665334;HNF1A:-0.0905235029574;ELK1,4_GABP{A,B1}:-0.0925986221574;FOS_FOS{B,L1}_JUN{B,D}:-0.103951576731;MTF1:-0.120403681787;FOXM1:-0.125916313485;FOXO1,3,4:-0.131994124509;HMX1:-0.147353715541;FOSL2:-0.155558082732;NRF1:-0.157188381848;RUNX1..3:-0.160583096438;XCPE1{core}:-0.164548022278;IRF1,2:-0.17062672782;TBX4,5:-0.180799788177;ZNF143:-0.192128001407;NKX2-3_NKX2-5:-0.196005798047;FOXA2:-0.196696043148;PPARG:-0.196977702294;ADNP_IRX_SIX_ZHX:-0.197766492202;ONECUT1,2:-0.207420819808;NHLH1,2:-0.220344262944;TLX2:-0.227324893574;LEF1_TCF7_TCF7L1,2:-0.241067121851;CREB1:-0.257243816651;PAX6:-0.258885796989;PRRX1,2:-0.266254337914;SOX5:-0.284349653102;RFX1:-0.291115479721;BPTF:-0.304717415935;SREBF1,2:-0.312746477704;STAT1,3:-0.315280667412;AR:-0.37384363517;NFE2:-0.378335473617;SPI1:-0.425447286473;HNF4A_NR2F1,2:-0.426367179219;HOXA9_MEIS1:-0.427380557944;PDX1:-0.440568341983;NFKB1_REL_RELA:-0.468860224745;CUX2:-0.471395020119;FOXD3:-0.479784899345;SOX{8,9,10}:-0.491147405764;ZBTB16:-0.494765886232;ATF5_CREB3:-0.506929402207;MYB:-0.508524749115;SPIB:-0.532548456255;PAX2:-0.534679591251;OCT4_SOX2{dimer}:-0.543475786607;PAX3,7:-0.548094636399;E2F1..5:-0.548496604004;TGIF1:-0.553374236282;AIRE:-0.558752500004;T:-0.562452378681;SP1:-0.562466919291;NFIL3:-0.563816256283;ATF4:-0.57027380465;CDX1,2,4:-0.581443542734;JUN:-0.583570686304;TEF:-0.593173726311;ARID5B:-0.598380547567;FOXP1:-0.605761785045;VSX1,2:-0.609372266349;ELF1,2,4:-0.610646268852;IRF7:-0.613751356865;EP300:-0.622301427773;LMO2:-0.623485096801;ZFP161:-0.636091971832;SOX2:-0.637702909381;NKX2-1,4:-0.647218570704;IKZF2:-0.658664304964;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.664187677137;ETS1,2:-0.669347384546;PITX1..3:-0.690083990334;NANOG:-0.707545239876;POU6F1:-0.708939419715;FOX{D1,D2}:-0.713433835168;STAT5{A,B}:-0.728114227527;BREu{core}:-0.73816844652;NFY{A,B,C}:-0.740217895024;GATA6:-0.774975130743;FOX{I1,J2}:-0.775964730104;ESRRA:-0.798268040034;SNAI1..3:-0.845425745355;FOXN1:-0.891083696648;POU2F1..3:-0.892644748197;RFX2..5_RFXANK_RFXAP:-0.904662014124;ATF2:-1.0053854055;FOXQ1:-1.02881888698;ZEB1:-1.06228507006;RORA:-1.06546499334;CRX:-1.08686455397;PBX1:-1.22866278479;FOX{F1,F2,J1}:-1.24352909454;RBPJ:-1.41948176011;MYOD1:-2.03161471682
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:13231-141I9;search_select_hide=table117:FF:13231-141I9
}}
}}

Latest revision as of 18:54, 4 June 2020

Name:mesenchymal stem cells (adipose derived), adipogenic induction
Species:Human (Homo sapiens)
Library ID:CNhs13421
Sample type:time courses
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age16
cell typeSELECT CELL TYPE
cell lineNA
companyNA
collaborationPeter Arner(Karolinska)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberF165
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005522
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13421 CAGE DRX008607 DRR009479
Accession ID Hg19

Library idBAMCTSS
CNhs13421 DRZ000904 DRZ002289
Accession ID Hg38

Library idBAMCTSS
CNhs13421 DRZ012254 DRZ013639
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005522
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10064.GGTAGC sRNA-Seq DRX036542 DRR040596
Accession ID Hg19

Library idBAMCTSS
SRhi10064.GGTAGC DRZ006961


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.015
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0996
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.33
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.123
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0934
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.126
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.672
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0963
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.082
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.126
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0.126
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.127
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.702
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.224
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.541
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.149
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.265
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.48
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.64
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.932
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.303
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.782
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.64
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13421

Jaspar motifP-value
MA0002.20.358
MA0003.10.489
MA0004.10.391
MA0006.10.351
MA0007.10.346
MA0009.10.301
MA0014.10.354
MA0017.10.31
MA0018.22.73107e-6
MA0019.10.904
MA0024.11.37171e-4
MA0025.10.00104
MA0027.10.948
MA0028.10.0246
MA0029.10.286
MA0030.10.0415
MA0031.10.0161
MA0035.20.0294
MA0038.10.0599
MA0039.20.0286
MA0040.10.791
MA0041.10.604
MA0042.10.968
MA0043.11.35412e-4
MA0046.10.344
MA0047.20.289
MA0048.10.0496
MA0050.10.00191
MA0051.10.0618
MA0052.10.398
MA0055.10.661
MA0057.10.658
MA0058.10.448
MA0059.10.845
MA0060.14.03965e-8
MA0061.10.085
MA0062.23.75673e-7
MA0065.20.585
MA0066.10.51
MA0067.10.025
MA0068.10.107
MA0069.10.0354
MA0070.10.798
MA0071.10.97
MA0072.10.15
MA0073.10.873
MA0074.10.113
MA0076.10.0137
MA0077.10.456
MA0078.10.945
MA0079.20.445
MA0080.24.14267e-9
MA0081.10.00892
MA0083.12.58679e-4
MA0084.10.065
MA0087.10.939
MA0088.10.832
MA0090.10.00216
MA0091.10.0348
MA0092.10.153
MA0093.10.419
MA0099.20.0181
MA0100.10.233
MA0101.10.00132
MA0102.20.163
MA0103.11.3137e-4
MA0104.20.0735
MA0105.10.865
MA0106.10.325
MA0107.12.73983e-4
MA0108.20.237
MA0111.10.296
MA0112.20.00253
MA0113.10.37
MA0114.10.361
MA0115.10.0746
MA0116.10.147
MA0117.10.229
MA0119.10.248
MA0122.10.235
MA0124.10.193
MA0125.10.299
MA0131.10.361
MA0135.10.03
MA0136.15.55786e-11
MA0137.20.645
MA0138.20.327
MA0139.10.666
MA0140.10.214
MA0141.10.924
MA0142.10.0748
MA0143.10.789
MA0144.10.74
MA0145.10.121
MA0146.10.935
MA0147.10.14
MA0148.10.406
MA0149.10.698
MA0150.10.0491
MA0152.10.00217
MA0153.10.829
MA0154.10.669
MA0155.10.137
MA0156.11.19045e-8
MA0157.10.304
MA0159.10.62
MA0160.10.187
MA0162.10.0369
MA0163.10.0115
MA0164.10.72
MA0258.10.25
MA0259.10.277



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13421

Novel motifP-value
10.981
100.443
1000.923
1010.414
1020.166
1030.829
1040.72
1050.251
1060.659
1070.217
1080.348
1090.752
110.703
1100.245
1110.626
1120.216
1130.0149
1140.258
1150.0307
1160.0713
1170.884
1180.295
1190.871
120.882
1200.727
1210.701
1220.0118
1238.60855e-4
1240.525
1250.689
1260.754
1270.527
1280.75
1290.788
130.925
1300.743
1310.886
1320.197
1330.785
1340.0202
1350.557
1360.55
1370.409
1380.293
1390.916
140.22
1400.722
1410.234
1420.646
1430.789
1440.319
1450.95
1460.819
1470.158
1480.477
1490.0169
150.397
1500.327
1510.647
1520.0925
1530.0465
1540.58
1550.00351
1560.552
1570.579
1580.00531
1590.565
160.0842
1600.425
1610.956
1620.232
1630.741
1640.159
1650.781
1660.134
1670.803
1680.735
1690.0237
170.79
180.183
199.42091e-4
20.177
200.196
210.0151
220.317
230.759
240.172
250.152
260.142
270.682
280.108
290.617
30.821
300.265
310.732
322.38337e-13
330.794
340.837
350.668
360.0341
370.0418
380.446
390.267
40.569
400.0812
410.237
420.453
430.873
440.263
450.765
460.524
470.695
480.927
490.62
50.876
500.67
510.847
520.739
530.175
540.677
550.123
560.981
570.671
580.128
590.141
60.359
600.964
610.842
620.525
630.563
640.986
650.538
660.238
670.578
680.418
690.418
70.293
700.64
710.368
720.988
730.0351
740.274
750.808
760.352
770.0431
780.377
790.00977
80.273
800.701
810.591
820.429
830.517
840.658
850.218
860.38
870.18
880.533
890.194
90.522
900.838
910.795
920.328
930.209
940.864
950.587
960.808
970.724
980.927
990.00912



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13421


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002570 (mesenchymal stem cell of adipose)

UBERON: Anatomy
0001013 (adipose tissue)
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0000344 (0 minute sample)
0000329 (adipogenic induction sample)
0000096 (human mesenchymal stem cell of adipose sample)
0000690 (human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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