FF:10777-110G3: Difference between revisions

Latest revision as of 15:03, 3 June 2020

Name:	NK T cell leukemia cell line:KHYG-1
Species:	Human (Homo sapiens)
Library ID:	CNhs11867
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	female
age	45
cell type	t cell, nk, immature
cell line	KHYG-1
company	JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005120

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11867		CAGE		DRX007793		DRR008665

Accession ID Hg19

Library id		BAM		CTSS
CNhs11867		DRZ000090		DRZ001475

Accession ID Hg38

Library id		BAM		CTSS
CNhs11867		DRZ011440		DRZ012825

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

RNA-Seq Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00005120

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
RDhi10082		RNA-Seq		DRX057139		DRR062898

Accession ID Hg19

Library id		BAM		CTSS
RDhi10082		DRZ007974

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.385
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.599
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0461
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0.855
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0517
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0654
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0177
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.0461
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.111
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0878
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.153
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.154
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0516
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.278
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.782
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.305
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0726
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.126
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.637
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0461
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.223
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.00254
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.54
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.126
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11867

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00125
MA0003.1	MA0003.1	0.53
MA0004.1	MA0004.1	0.304
MA0006.1	MA0006.1	0.347
MA0007.1	MA0007.1	0.543
MA0009.1	MA0009.1	0.914
MA0014.1	MA0014.1	0.539
MA0017.1	MA0017.1	0.282
MA0018.2	MA0018.2	0.249
MA0019.1	MA0019.1	0.0787
MA0024.1	MA0024.1	1.50297e-6
MA0025.1	MA0025.1	0.273
MA0027.1	MA0027.1	0.369
MA0028.1	MA0028.1	1.36227e-5
MA0029.1	MA0029.1	0.328
MA0030.1	MA0030.1	0.104
MA0031.1	MA0031.1	0.272
MA0035.2	MA0035.2	0.00158
MA0038.1	MA0038.1	0.229
MA0039.2	MA0039.2	0.476
MA0040.1	MA0040.1	0.207
MA0041.1	MA0041.1	0.29
MA0042.1	MA0042.1	0.297
MA0043.1	MA0043.1	0.176
MA0046.1	MA0046.1	0.249
MA0047.2	MA0047.2	0.966
MA0048.1	MA0048.1	0.492
MA0050.1	MA0050.1	1.0389e-4
MA0051.1	MA0051.1	0.0818
MA0052.1	MA0052.1	0.0535
MA0055.1	MA0055.1	0.391
MA0057.1	MA0057.1	0.934
MA0058.1	MA0058.1	0.224
MA0059.1	MA0059.1	0.0147
MA0060.1	MA0060.1	5.38374e-13
MA0061.1	MA0061.1	0.724
MA0062.2	MA0062.2	1.022e-11
MA0065.2	MA0065.2	0.0422
MA0066.1	MA0066.1	0.878
MA0067.1	MA0067.1	0.45
MA0068.1	MA0068.1	0.0285
MA0069.1	MA0069.1	0.939
MA0070.1	MA0070.1	0.543
MA0071.1	MA0071.1	0.445
MA0072.1	MA0072.1	0.023
MA0073.1	MA0073.1	0.626
MA0074.1	MA0074.1	0.426
MA0076.1	MA0076.1	9.32635e-8
MA0077.1	MA0077.1	0.508
MA0078.1	MA0078.1	0.718
MA0079.2	MA0079.2	0.331
MA0080.2	MA0080.2	2.07486e-5
MA0081.1	MA0081.1	0.128
MA0083.1	MA0083.1	0.298
MA0084.1	MA0084.1	0.859
MA0087.1	MA0087.1	0.32
MA0088.1	MA0088.1	0.0689
MA0090.1	MA0090.1	4.22347e-4
MA0091.1	MA0091.1	0.928
MA0092.1	MA0092.1	0.872
MA0093.1	MA0093.1	0.272
MA0099.2	MA0099.2	0.0195
MA0100.1	MA0100.1	0.0403
MA0101.1	MA0101.1	0.31
MA0102.2	MA0102.2	0.625
MA0103.1	MA0103.1	0.241
MA0104.2	MA0104.2	0.00442
MA0105.1	MA0105.1	0.0147
MA0106.1	MA0106.1	0.966
MA0107.1	MA0107.1	0.123
MA0108.2	MA0108.2	0.00359
MA0111.1	MA0111.1	0.348
MA0112.2	MA0112.2	0.607
MA0113.1	MA0113.1	0.997
MA0114.1	MA0114.1	0.168
MA0115.1	MA0115.1	0.29
MA0116.1	MA0116.1	2.19174e-4
MA0117.1	MA0117.1	0.993
MA0119.1	MA0119.1	0.856
MA0122.1	MA0122.1	0.371
MA0124.1	MA0124.1	0.978
MA0125.1	MA0125.1	0.696
MA0131.1	MA0131.1	0.0627
MA0135.1	MA0135.1	0.0244
MA0136.1	MA0136.1	4.29368e-8
MA0137.2	MA0137.2	0.77
MA0138.2	MA0138.2	0.571
MA0139.1	MA0139.1	0.0297
MA0140.1	MA0140.1	1.15012e-4
MA0141.1	MA0141.1	0.224
MA0142.1	MA0142.1	0.494
MA0143.1	MA0143.1	0.283
MA0144.1	MA0144.1	0.593
MA0145.1	MA0145.1	0.529
MA0146.1	MA0146.1	0.141
MA0147.1	MA0147.1	0.00215
MA0148.1	MA0148.1	0.937
MA0149.1	MA0149.1	0.0372
MA0150.1	MA0150.1	0.899
MA0152.1	MA0152.1	0.175
MA0153.1	MA0153.1	0.309
MA0154.1	MA0154.1	0.607
MA0155.1	MA0155.1	0.369
MA0156.1	MA0156.1	4.90849e-11
MA0157.1	MA0157.1	0.0234
MA0159.1	MA0159.1	0.312
MA0160.1	MA0160.1	0.662
MA0162.1	MA0162.1	0.935
MA0163.1	MA0163.1	2.66529e-9
MA0164.1	MA0164.1	0.988
MA0258.1	MA0258.1	0.244
MA0259.1	MA0259.1	0.103

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11867

Novel motif	Logo	P-value
1	1	0.0626
10	10	0.00474
100	100	0.299
101	101	0.0264
102	102	0.46
103	103	0.477
104	104	0.581
105	105	0.888
106	106	0.4
107	107	0.324
108	108	0.992
109	109	0.0463
11	11	0.041
110	110	0.307
111	111	0.126
112	112	0.479
113	113	0.466
114	114	0.314
115	115	0.489
116	116	0.809
117	117	0.0176
118	118	0.597
119	119	0.505
12	12	0.875
120	120	0.958
121	121	0.976
122	122	0.666
123	123	2.6626e-4
124	124	0.0067
125	125	0.644
126	126	0.484
127	127	0.295
128	128	0.478
129	129	0.625
13	13	0.162
130	130	0.286
131	131	0.491
132	132	0.913
133	133	0.608
134	134	0.776
135	135	0.7
136	136	0.116
137	137	0.584
138	138	0.324
139	139	0.501
14	14	0.756
140	140	0.534
141	141	0.526
142	142	0.665
143	143	3.44943e-4
144	144	0.661
145	145	0.589
146	146	0.944
147	147	0.194
148	148	0.23
149	149	0.193
15	15	0.281
150	150	0.23
151	151	0.983
152	152	0.0492
153	153	0.57
154	154	0.87
155	155	0.0771
156	156	0.84
157	157	0.63
158	158	0.958
159	159	0.404
16	16	0.541
160	160	0.812
161	161	0.232
162	162	0.863
163	163	0.462
164	164	0.76
165	165	0.754
166	166	0.441
167	167	0.0362
168	168	0.642
169	169	0.856
17	17	0.621
18	18	0.315
19	19	0.677
2	2	0.545
20	20	0.405
21	21	0.265
22	22	0.619
23	23	0.663
24	24	0.582
25	25	0.0551
26	26	0.121
27	27	0.576
28	28	0.431
29	29	0.0261
3	3	0.134
30	30	0.135
31	31	0.797
32	32	0.363
33	33	0.418
34	34	0.691
35	35	0.305
36	36	0.0348
37	37	0.371
38	38	0.569
39	39	0.669
4	4	0.0126
40	40	0.0825
41	41	0.467
42	42	0.146
43	43	0.326
44	44	0.317
45	45	0.477
46	46	0.197
47	47	0.0369
48	48	0.135
49	49	0.0105
5	5	0.826
50	50	0.677
51	51	0.931
52	52	0.0664
53	53	0.201
54	54	0.997
55	55	0.522
56	56	0.677
57	57	0.199
58	58	0.102
59	59	0.889
6	6	0.826
60	60	0.923
61	61	0.1
62	62	0.0909
63	63	0.644
64	64	0.121
65	65	0.783
66	66	3.55465e-7
67	67	0.623
68	68	0.643
69	69	0.735
7	7	0.105
70	70	0.324
71	71	0.0387
72	72	0.549
73	73	0.921
74	74	0.817
75	75	0.00855
76	76	0.518
77	77	0.214
78	78	0.305
79	79	0.265
8	8	0.381
80	80	0.862
81	81	0.41
82	82	0.83
83	83	0.7
84	84	0.523
85	85	0.174
86	86	0.279
87	87	0.176
88	88	0.996
89	89	0.185
9	9	0.772
90	90	0.177
91	91	0.346
92	92	0.495
93	93	0.627
94	94	0.358
95	95	0.0164
96	96	0.415
97	97	0.0967
98	98	0.321
99	99	0.384

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11867

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
CL:0000814 mature NK T cell
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102504 T-lymphoblastic leukemia cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0002127 (innate effector T cell)
0000911 (effector T cell)
0000814 (mature NK T cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0102504 (T-lymphoblastic leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0100741 (lymphocytic leukemia cell line sample)
0100773 (lymphoblastoid cell line sample)
0100739 (lymphoblastic leukemia cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
CL:0002425 (early T lineage precursor)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002370,UBERON:0000483,UBERON:0002530,UBERON:0002384,UBERON:0006562,UBERON:0000974,UBERON:0000926,UBERON:0000479,UBERON:0001007,UBERON:0000064,UBERON:0000077,UBERON:0002368,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004119,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005911,UBERON:0004921,UBERON:0005423,UBERON:0000477,UBERON:0000481,UBERON:0000467,UBERON:0001062,UBERON:0000119,UBERON:0000490,UBERON:0005291,UBERON:0003929,UBERON:0000072,UBERON:0004807,UBERON:0003104,UBERON:0004177,UBERON:0005057,UBERON:0005058,UBERON:0001048,UBERON:0000925,UBERON:0003408,UBERON:0006598,UBERON:0003351,UBERON:0004185,UBERON:0002532,UBERON:0001555,UBERON:0000065,UBERON:0001004,UBERON:0000153,UBERON:0007811,UBERON:0002390,UBERON:0007026,UBERON:0001041,UBERON:0000949,UBERON:0001557,UBERON:0001042,UBERON:0002193,UBERON:0002405,UBERON:0009113,UBERON:0008814,UBERON:0009142,UBERON:0003081,UBERON:0003295,UBERON:0009722,UBERON:0006595,UBERON:0006603,UBERON:0009145,UBERON:0005562,UBERON:0003061,UBERON:0007690
+|DRA_sample_Accession=CAGE@SAMD00005120
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000034,CL:0002032,CL:0000012,CL:0002320,CL:0000063,CL:0002371,CL:0000542,CL:0000219,CL:0000004,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002420,CL:0002419,CL:0000893,CL:0002489,CL:0000790,CL:0002127,CL:0000838,CL:0002031,CL:0000827,CL:0000037,CL:0000914,CL:0000911,CL:0000809,CL:0000566,CL:0000837,CL:0000814,CL:0000051,CL:0000808,CL:0000894,CL:0000806,CL:0000807,CL:0000805,CL:0002042,CL:0002425,CL:0002039,CL:0002040,CL:0002041
+|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005120
+|accession_numbers=CAGE;DRX007793;DRR008665;DRZ000090;DRZ001475;DRZ011440;DRZ012825
+|accession_numbers_RNASeq=RNA-Seq;DRX057139;DRR062898;DRZ007974
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0002127,CL:0000911,CL:0000814
 |ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0102504,FF:0101035,FF:0100741,FF:0100773,FF:0100739
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!1.99!95.94!PLEK;;chr17:45810594..45810608,+!p1@TBX21!1.92!82.72!TBX21;;chr8:67525443..67525459,-!p2@MYBL1!1.83!97.74!MYBL1;;chr3:27763807..27763822,-!p1@EOMES!1.77!57.72!EOMES;;chr1:25291475..25291511,-!p2@RUNX3!1.66!45.06!RUNX3;;chr6:391743..391759,+!p1@IRF4!1.63!41.36!IRF4;;chr20:50159198..50159299,-!p1@NFATC2!1.54!48.08!NFATC2;;chr2:192015701..192015743,-!p1@STAT4!1.48!40.13!STAT4;;chr9:117150254..117150271,-!p1@AKNA!1.46!74.98!AKNA;;chr8:72756063..72756125,-!p1@MSC!1.44!52.79!MSC;;chr14:75988771..75988826,+!p1@BATF!1.43!34.41!BATF;;chr2:231090433..231090469,+!p1@SP140!1.43!25.89!SP140;;chr1:25256756..25256774,-!p1@RUNX3!1.41!45.73!RUNX3;;chr8:72756637..72756664,-!p3@MSC!1.35!24.32!MSC;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.50!ZBED1;;chr1:158978768..158978800,+!p8@IFI16!1.28!18.16!IFI16;;chr7:137620650..137620677,-!p3@CREB3L2!1.27!17.71!CREB3L2;;chr8:67525473..67525518,-!p1@MYBL1!1.23!35.98!MYBL1;;chr7:50343634..50343717,+!p2@IKZF1!1.20!14.68!IKZF1;;chr20:42543441..42543497,+!p1@TOX2!1.18!63.22!TOX2;;chr7:27205136..27205164,-!p1@HOXA9!1.17!13.90!HOXA9;;chr8:72756667..72756736,-!p2@MSC!1.16!21.07!MSC;;chr10:8096772..8096787,+!p2@GATA3!1.16!15.80!GATA3;;chr2:68592394..68592405,+!p2@PLEK!1.16!13.56!PLEK;;chr1:23857698..23857733,-!p1@E2F2!1.14!23.65!E2F2;;chr20:56195474..56195506,-!p1@ZBP1!1.10!11.66!ZBP1;;chr19:36204309..36204335,+!p1@ZBTB32!1.09!11.32!ZBTB32;;chr8:60031619..60031676,-!p1@TOX!1.05!22.42!TOX;;chr8:72756023..72756055,-!p6@MSC!1.05!12.89!MSC;;chr17:46703212..46703238,-!p2@HOXB9!1.05!10.20!HOXB9;;chr7:137620684..137620711,-!p4@CREB3L2!1.04!9.86!CREB3L2;;chr16:68119324..68119364,+!p1@NFATC3!1.03!44.27!NFATC3;;chr14:75988831..75988847,+!p2@BATF!1.03!9.64!BATF;;chr15:60884706..60884743,-!p1@RORA!1.02!49.65!RORA;;chr15:74833584..74833626,+!p1@ARID3B!1.01!22.08!ARID3B;;chr2:231090344..231090361,-!p3@SP110!1.01!9.30!SP110;;chr3:18486354..18486377,-!p2@SATB1!1.00!11.32!SATB1;;chr17:46703687..46703740,-!p1@HOXB9!0.98!8.52!HOXB9;;chr7:50343895..50343936,+!p5@IKZF1!0.97!8.41!IKZF1;;chr8:72755987..72756002,-!p7@MSC!0.97!8.41!MSC;;chr7:50344251..50344288,+!p3@IKZF1!0.96!8.18!IKZF1;;chr17:46703942..46703964,-!p4@HOXB9!0.96!8.07!HOXB9;;chr20:56195525..56195556,-!p2@ZBP1!0.95!7.96!ZBP1;;chr2:231090471..231090504,+!p2@SP140!0.95!7.85!SP140;;chr19:19779619..19779670,+!p1@ZNF101!0.94!22.53!ZNF101;;chr8:67525524..67525543,-!p3@MYBL1!0.93!12.78!MYBL1;;chr5:176738887..176738934,-!p1@MXD3!0.92!51.00!MXD3;;chr7:50344289..50344323,+!p1@IKZF1!0.92!7.40!IKZF1;;chr1:212873267..212873332,-!p1@BATF3!0.91!9.75!BATF3;;chr1:25291620..25291635,-!p4@RUNX3!0.91!7.06!RUNX3;;chr1:158979686..158979745,+!p1@IFI16!0.90!240.76!IFI16;;chr20:32274179..32274213,-!p1@E2F1!0.90!48.31!E2F1;;chr13:41593425..41593480,-!p1@ELF1!0.89!45.62!ELF1;;chr6:106546808..106546833,+!p3@PRDM1!0.88!8.52!PRDM1;;chr8:37963407..37963454,+!p2@ASH2L!0.87!20.29!ASH2L;;chr21:47278815..47278834,+!p6@PCBP3!0.87!6.39!PCBP3;;chr7:64838786..64838809,+!p2@ZNF92!0.86!37.32!ZNF92;;chr14:37131058..37131139,+!p1@PAX9!0.86!6.16!PAX9;;chr8:42698194..42698239,-!p2@THAP1!0.85!28.58!THAP1;;chr17:41277372..41277418,-!p1@BRCA1!0.85!23.43!BRCA1;;chr4:4291837..4291859,-!p2@LYAR!0.85!20.74!LYAR;;chr7:27190547..27190591,-!p1@HOXA6!0.85!6.05!HOXA6;;chr19:4153613..4153652,+!p1@CREB3L3!0.85!6.05!CREB3L3;;chr19:19729477..19729542,-!p1@PBX4!0.84!13.23!PBX4;;chr7:50348268..50348366,+!p4@IKZF1!0.84!5.94!IKZF1;;chr16:67063036..67063088,+!p1@CBFB!0.83!100.32!CBFB;;chr7:148581327..148581347,-!p2@EZH2!0.83!20.62!EZH2;;chr10:8096631..8096660,+!p1@GATA3!0.83!7.17!GATA3;;chr3:27763613..27763618,-!p6@EOMES!0.83!5.83!EOMES;;chr17:61920280..61920343,-!p2@SMARCD2!0.82!58.84!SMARCD2;;chr20:48599506..48599526,+!p1@SNAI1!0.82!39.01!SNAI1;;chr16:68118689..68118733,+!p3@NFATC3!0.82!15.02!NFATC3;;chr20:31350184..31350200,+!p1@DNMT3B!0.82!12.33!DNMT3B;;chr10:8095593..8095625,+!p3@GATA3!0.82!6.61!GATA3;;chr7:99214559..99214601,+!p1@ZNF498!0.81!73.19!ZNF498;;chr20:42543506..42543549,+!p2@TOX2!0.81!13.79!TOX2;;chr3:63953435..63953499,+!p1@ATXN7!0.81!5.49!ATXN7;;chr2:192015750..192015793,-!p2@STAT4!0.80!7.29!STAT4;;chr6:100061724..100061753,+!p1@PRDM13!0.80!5.38!PRDM13;;chr7:27196267..27196311,-!p1@HOXA7!0.80!5.38!HOXA7;;chr1:212873084..212873137,-!p2@BATF3!0.80!5.27!BATF3;;chr20:42295713..42295738,+!p2@MYBL2!0.79!33.18!MYBL2;;chr7:148581360..148581425,-!p1@EZH2!0.79!27.24!EZH2;;chr7:99156212..99156244,+!p3@ZNF655!0.79!21.63!ZNF655;;chr15:76629123..76629151,+!p1@ISL2!0.79!5.83!ISL2;;chr3:27762020..27762023,-!p5@EOMES!0.79!5.16!EOMES;;chr1:92951607..92951661,-!p1@GFI1!0.79!5.16!GFI1;;chr17:7388010..7388017,-!p5@ZBTB4!0.78!8.85!ZBTB4;;chr8:72756267..72756296,-!p4@MSC!0.78!7.62!MSC;;chr15:67391010..67391046,+!p13@SMAD3!0.78!5.04!SMAD3;;chr8:102217679..102217719,-!p2@ZNF706!0.77!18.38!ZNF706;;chr1:158978830..158978851,+!p22@IFI16!0.77!4.93!IFI16;;chr20:42295745..42295765,+!p1@MYBL2!0.75!83.39!MYBL2;;chr3:71179699..71179744,-!p2@FOXP1!0.75!37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+|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790,CL:0002425
 |fonse_cell_line=FF:0101035
 |fonse_cell_line_closure=FF:0101035
@@ Line 35: / Line 43: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/NK%2520T%2520cell%2520leukemia%2520cell%2520line%253aKHYG-1.CNhs11867.10777-110G3.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/NK%2520T%2520cell%2520leukemia%2520cell%2520line%253aKHYG-1.CNhs11867.10777-110G3.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/NK%2520T%2520cell%2520leukemia%2520cell%2520line%253aKHYG-1.CNhs11867.10777-110G3.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/NK%2520T%2520cell%2520leukemia%2520cell%2520line%253aKHYG-1.CNhs11867.10777-110G3.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/NK%2520T%2520cell%2520leukemia%2520cell%2520line%253aKHYG-1.CNhs11867.10777-110G3.hg38.nobarcode.ctss.bed.gz
 |id=FF:10777-110G3
-|is_a=CL:0000814;;EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102504
+|is_a=CL:0000814;;EFO:0002091;;FF:0000210;;FF:0102504
+|is_obsolete=
+|library_id=CNhs11867
+|library_id_phase_based=2:CNhs11867
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10777
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10777
 |name=NK T cell leukemia cell line:KHYG-1
 |namespace=FANTOM5
@@ Line 42: / Line 62: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11867,LSID830,release010,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=110
 |rna_catalog_number=
@@ Line 56: / Line 79: @@
 |rna_tube_id=110G3
 |rna_weight_ug=36.16623
+|rnaseq_library_id=RDhi10082
 |sample_age=45
+|sample_category=cell lines
 |sample_cell_catalog=jcrb0156
 |sample_cell_line=KHYG-1
@@ Line 69: / Line 94: @@
 |sample_ethnicity=J
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.91991892930756e-236!GO:0043227;membrane-bound organelle;6.04852368760119e-201!GO:0043231;intracellular membrane-bound organelle;1.52026967995114e-200!GO:0043226;organelle;4.53025879170391e-190!GO:0043229;intracellular organelle;1.57130957465154e-189!GO:0005737;cytoplasm;4.55385974702121e-160!GO:0044422;organelle part;1.39929314091186e-158!GO:0044446;intracellular organelle part;7.22992326942236e-157!GO:0032991;macromolecular complex;2.99124992535928e-124!GO:0044444;cytoplasmic part;3.41802776522245e-112!GO:0044237;cellular metabolic process;7.60299894838367e-98!GO:0005634;nucleus;4.90721928843799e-95!GO:0044238;primary metabolic process;1.43305176897495e-93!GO:0044428;nuclear part;2.23262646724393e-92!GO:0030529;ribonucleoprotein complex;2.63475052372248e-90!GO:0043170;macromolecule metabolic process;2.03199353248022e-89!GO:0043233;organelle lumen;4.94331093019009e-79!GO:0031974;membrane-enclosed lumen;4.94331093019009e-79!GO:0003723;RNA binding;1.26823541394564e-78!GO:0005515;protein binding;4.30488891488437e-68!GO:0043234;protein complex;3.30123278128648e-67!GO:0005739;mitochondrion;8.99639261099334e-67!GO:0006412;translation;1.31819300256148e-57!GO:0006396;RNA processing;1.91050376440369e-57!GO:0019538;protein metabolic process;3.54953746479232e-54!GO:0031981;nuclear lumen;3.76925982609505e-52!GO:0043283;biopolymer metabolic process;1.15150928659187e-51!GO:0006259;DNA metabolic process;1.26388492403392e-50!GO:0044267;cellular protein metabolic process;2.09696477707838e-50!GO:0044260;cellular macromolecule metabolic process;9.83846311829858e-50!GO:0005840;ribosome;1.16844889154802e-49!GO:0016071;mRNA metabolic process;3.28527574935887e-47!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.43300792083557e-46!GO:0031090;organelle membrane;1.50844912570871e-46!GO:0044429;mitochondrial part;2.08024834682657e-45!GO:0044249;cellular biosynthetic process;4.76055574446165e-44!GO:0009058;biosynthetic process;9.55456208961485e-44!GO:0009059;macromolecule biosynthetic process;1.07701145731654e-43!GO:0031967;organelle envelope;1.32223729849068e-43!GO:0003735;structural constituent of ribosome;1.58529307665212e-43!GO:0031975;envelope;2.96035673325485e-43!GO:0016043;cellular component organization and biogenesis;8.51108228126801e-42!GO:0015031;protein transport;3.98835486897467e-41!GO:0033036;macromolecule localization;5.00983576896646e-41!GO:0007049;cell cycle;9.26398230825383e-41!GO:0010467;gene expression;1.32712231455798e-40!GO:0006397;mRNA processing;2.25907700580145e-40!GO:0008380;RNA splicing;1.57538564403131e-39!GO:0045184;establishment of protein localization;1.49893923354193e-38!GO:0033279;ribosomal subunit;3.52938368320229e-38!GO:0008104;protein localization;2.19406263854937e-37!GO:0006996;organelle organization and biogenesis;2.62661829461483e-36!GO:0046907;intracellular transport;3.04454082457983e-36!GO:0005829;cytosol;1.27962296635908e-35!GO:0065003;macromolecular complex assembly;4.45697636452399e-35!GO:0043228;non-membrane-bound organelle;6.90849250898223e-35!GO:0043232;intracellular non-membrane-bound organelle;6.90849250898223e-35!GO:0022402;cell cycle process;1.43367421146271e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.06960027100372e-33!GO:0005654;nucleoplasm;1.44467206510692e-33!GO:0000166;nucleotide binding;1.13817787340031e-31!GO:0006886;intracellular protein transport;2.02912991100839e-31!GO:0006974;response to DNA damage stimulus;4.73736108520755e-31!GO:0005681;spliceosome;1.40230548202145e-30!GO:0022607;cellular component assembly;1.44557563961335e-30!GO:0005694;chromosome;2.54468982006365e-30!GO:0000278;mitotic cell cycle;3.31318437796471e-29!GO:0005740;mitochondrial envelope;4.74375283310764e-28!GO:0019866;organelle inner membrane;4.98148313893819e-28!GO:0044427;chromosomal part;9.72585911136048e-28!GO:0031966;mitochondrial membrane;3.56877632062106e-27!GO:0003676;nucleic acid binding;5.60347810773396e-27!GO:0051649;establishment of cellular localization;9.07151205650824e-27!GO:0051641;cellular localization;2.53171848155613e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.63862229913455e-26!GO:0006281;DNA repair;2.77168670287716e-26!GO:0044451;nucleoplasm part;9.51781499010634e-26!GO:0022403;cell cycle phase;1.05427676859469e-25!GO:0005743;mitochondrial inner membrane;4.67602588233784e-25!GO:0044445;cytosolic part;3.48696523550668e-24!GO:0032553;ribonucleotide binding;4.72756709531187e-24!GO:0032555;purine ribonucleotide binding;4.72756709531187e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.24295494478567e-24!GO:0016462;pyrophosphatase activity;7.48642076762962e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;8.94190821419832e-24!GO:0017111;nucleoside-triphosphatase activity;1.08935773779318e-23!GO:0017076;purine nucleotide binding;1.38044282380744e-23!GO:0000087;M phase of mitotic cell cycle;1.59328746575465e-23!GO:0007067;mitosis;3.76708180538528e-23!GO:0051276;chromosome organization and biogenesis;4.26431758170532e-23!GO:0006119;oxidative phosphorylation;4.45080059118609e-23!GO:0005524;ATP binding;1.66806554065883e-22!GO:0016874;ligase activity;3.56020226469253e-22!GO:0006512;ubiquitin cycle;3.90821434861738e-22!GO:0032559;adenyl ribonucleotide binding;4.9821977315499e-22!GO:0030554;adenyl nucleotide binding;2.70082686730925e-21!GO:0031980;mitochondrial lumen;2.98640072278344e-21!GO:0005759;mitochondrial matrix;2.98640072278344e-21!GO:0000279;M phase;4.93402728320555e-21!GO:0044455;mitochondrial membrane part;6.25794992120091e-21!GO:0051301;cell division;8.00916318039405e-21!GO:0005730;nucleolus;1.87218655610696e-20!GO:0009719;response to endogenous stimulus;2.26229594384303e-20!GO:0044265;cellular macromolecule catabolic process;3.02924949035523e-20!GO:0015934;large ribosomal subunit;3.2454105786604e-20!GO:0012501;programmed cell death;4.26973886923999e-20!GO:0006260;DNA replication;6.25269462560583e-20!GO:0006915;apoptosis;6.47382067527017e-20!GO:0012505;endomembrane system;3.06434622421895e-19!GO:0008219;cell death;3.53196380485072e-19!GO:0016265;death;3.53196380485072e-19!GO:0015935;small ribosomal subunit;4.35777983185884e-19!GO:0042623;ATPase activity, coupled;4.36508083835574e-19!GO:0016887;ATPase activity;6.47168049573692e-19!GO:0022618;protein-RNA complex assembly;8.56879095870277e-19!GO:0016070;RNA metabolic process;1.78680720511081e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;2.01992967978607e-17!GO:0006457;protein folding;2.45414090247549e-17!GO:0048770;pigment granule;3.2866346773415e-17!GO:0042470;melanosome;3.2866346773415e-17!GO:0044248;cellular catabolic process;4.3124160441121e-17!GO:0000502;proteasome complex (sensu Eukaryota);6.34769180715723e-17!GO:0043412;biopolymer modification;7.35260679859025e-17!GO:0051726;regulation of cell cycle;7.42928214529229e-17!GO:0006323;DNA packaging;9.1089053273742e-17!GO:0005746;mitochondrial respiratory chain;9.1089053273742e-17!GO:0043285;biopolymer catabolic process;9.1614869512689e-17!GO:0000074;regulation of progression through cell cycle;1.06986752022103e-16!GO:0009057;macromolecule catabolic process;1.49901544420604e-16!GO:0008134;transcription factor binding;1.66481204868867e-16!GO:0005635;nuclear envelope;2.66583467738082e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;3.34393882717691e-16!GO:0019941;modification-dependent protein catabolic process;3.89414497452419e-16!GO:0043632;modification-dependent macromolecule catabolic process;3.89414497452419e-16!GO:0006511;ubiquitin-dependent protein catabolic process;5.39249520814815e-16!GO:0008135;translation factor activity, nucleic acid binding;6.42160661178019e-16!GO:0042254;ribosome biogenesis and assembly;8.52503573811641e-16!GO:0044257;cellular protein catabolic process;8.52503573811641e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.93180641104422e-15!GO:0006605;protein targeting;2.11810626070695e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.80983227693193e-15!GO:0003954;NADH dehydrogenase activity;5.80983227693193e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.80983227693193e-15!GO:0006913;nucleocytoplasmic transport;6.28283086534254e-15!GO:0044453;nuclear membrane part;6.57897514170432e-15!GO:0031965;nuclear membrane;7.04051374784945e-15!GO:0005761;mitochondrial ribosome;7.69563219360443e-15!GO:0000313;organellar ribosome;7.69563219360443e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;1.06728818665534e-14!GO:0000375;RNA splicing, via transesterification reactions;1.06728818665534e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.06728818665534e-14!GO:0051169;nuclear transport;1.25319833584796e-14!GO:0006464;protein modification process;1.54426952051248e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.49951476842022e-14!GO:0000785;chromatin;4.96823789245289e-14!GO:0044432;endoplasmic reticulum part;7.045092042818e-14!GO:0043687;post-translational protein modification;1.18008618349618e-13!GO:0016604;nuclear body;1.46420225993488e-13!GO:0042981;regulation of apoptosis;2.25206772087555e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.44917381083956e-13!GO:0042773;ATP synthesis coupled electron transport;2.44917381083956e-13!GO:0003743;translation initiation factor activity;2.56079581315429e-13!GO:0051186;cofactor metabolic process;2.8819416569943e-13!GO:0043067;regulation of programmed cell death;3.03532596867201e-13!GO:0006333;chromatin assembly or disassembly;3.15056462820243e-13!GO:0065004;protein-DNA complex assembly;3.81844860545302e-13!GO:0030964;NADH dehydrogenase complex (quinone);6.47186161809013e-13!GO:0045271;respiratory chain complex I;6.47186161809013e-13!GO:0005747;mitochondrial respiratory chain complex I;6.47186161809013e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.75073885422254e-13!GO:0051082;unfolded protein binding;9.87264427646614e-13!GO:0006399;tRNA metabolic process;1.05769254598977e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.96864591181389e-12!GO:0030163;protein catabolic process;2.44835865561681e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.65564187353237e-12!GO:0005783;endoplasmic reticulum;3.4052664024945e-12!GO:0004386;helicase activity;6.61523855216947e-12!GO:0005643;nuclear pore;7.7563724952485e-12!GO:0016787;hydrolase activity;8.21385849151607e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.51956852519462e-12!GO:0043566;structure-specific DNA binding;1.02047937474898e-11!GO:0017038;protein import;1.51116752823111e-11!GO:0000775;chromosome, pericentric region;1.87290300634672e-11!GO:0005789;endoplasmic reticulum membrane;2.11234489526295e-11!GO:0016568;chromatin modification;2.18601159969795e-11!GO:0048193;Golgi vesicle transport;2.62513596324052e-11!GO:0006163;purine nucleotide metabolic process;3.95798855463105e-11!GO:0006413;translational initiation;4.26270403699541e-11!GO:0009259;ribonucleotide metabolic process;5.29773094153024e-11!GO:0003697;single-stranded DNA binding;5.46625874041067e-11!GO:0050657;nucleic acid transport;6.04021373747601e-11!GO:0051236;establishment of RNA localization;6.04021373747601e-11!GO:0050658;RNA transport;6.04021373747601e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.55321023187299e-11!GO:0006403;RNA localization;8.37253531261174e-11!GO:0006164;purine nucleotide biosynthetic process;9.86905299768565e-11!GO:0006364;rRNA processing;1.20525690225509e-10!GO:0006732;coenzyme metabolic process;1.26519031272627e-10!GO:0008026;ATP-dependent helicase activity;1.46470341948908e-10!GO:0016072;rRNA metabolic process;1.49900993568138e-10!GO:0046930;pore complex;2.16428033633556e-10!GO:0065002;intracellular protein transport across a membrane;2.67137339703134e-10!GO:0009150;purine ribonucleotide metabolic process;2.83959207833922e-10!GO:0003712;transcription cofactor activity;3.13985491326571e-10!GO:0009260;ribonucleotide biosynthetic process;3.14252983921166e-10!GO:0016779;nucleotidyltransferase activity;3.26771813636591e-10!GO:0006261;DNA-dependent DNA replication;5.16942170478291e-10!GO:0006446;regulation of translational initiation;6.45386712194713e-10!GO:0005819;spindle;6.75372349704573e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.17262030902377e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.59138835643443e-10!GO:0019829;cation-transporting ATPase activity;8.96858613932709e-10!GO:0009056;catabolic process;9.03430864193763e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.08040802780313e-09!GO:0016607;nuclear speck;1.33155269127754e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.69606153502332e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.69606153502332e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.69606153502332e-09!GO:0051246;regulation of protein metabolic process;1.83396972768639e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.89020583378549e-09!GO:0008639;small protein conjugating enzyme activity;1.96094253763835e-09!GO:0031497;chromatin assembly;2.13573567936519e-09!GO:0006334;nucleosome assembly;2.74718494389043e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.0706332723576e-09!GO:0019787;small conjugating protein ligase activity;3.68306824112793e-09!GO:0006793;phosphorus metabolic process;4.29368602816084e-09!GO:0006796;phosphate metabolic process;4.29368602816084e-09!GO:0051028;mRNA transport;4.30448207291141e-09!GO:0004842;ubiquitin-protein ligase activity;5.00191560908561e-09!GO:0015986;ATP synthesis coupled proton transport;5.12811705504442e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.12811705504442e-09!GO:0043038;amino acid activation;5.26263115587142e-09!GO:0006418;tRNA aminoacylation for protein translation;5.26263115587142e-09!GO:0043039;tRNA aminoacylation;5.26263115587142e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.56064034114499e-09!GO:0015078;hydrogen ion transmembrane transporter activity;7.45483016442736e-09!GO:0016192;vesicle-mediated transport;9.85670704218789e-09!GO:0006461;protein complex assembly;1.26082289738774e-08!GO:0008565;protein transporter activity;1.36021034971673e-08!GO:0009055;electron carrier activity;1.52635666706099e-08!GO:0016740;transferase activity;1.55322261810585e-08!GO:0015630;microtubule cytoskeleton;1.84659020048474e-08!GO:0005794;Golgi apparatus;2.34599891228164e-08!GO:0051170;nuclear import;2.43961338458655e-08!GO:0051325;interphase;2.70874179862051e-08!GO:0006754;ATP biosynthetic process;3.1963950446666e-08!GO:0006753;nucleoside phosphate metabolic process;3.1963950446666e-08!GO:0000075;cell cycle checkpoint;3.28658237130323e-08!GO:0006606;protein import into nucleus;4.14738372339516e-08!GO:0046034;ATP metabolic process;4.65057051236733e-08!GO:0009060;aerobic respiration;5.26567314442428e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.7079449947474e-08!GO:0016310;phosphorylation;6.52617252854214e-08!GO:0009141;nucleoside triphosphate metabolic process;6.57086395018144e-08!GO:0009199;ribonucleoside triphosphate metabolic process;6.6136807087046e-08!GO:0051188;cofactor biosynthetic process;6.66358498118798e-08!GO:0016881;acid-amino acid ligase activity;7.91498650109537e-08!GO:0009142;nucleoside triphosphate biosynthetic process;8.00368962015262e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.00368962015262e-08!GO:0006310;DNA recombination;8.62010767766835e-08!GO:0005839;proteasome core complex (sensu Eukaryota);8.99005510959521e-08!GO:0016469;proton-transporting two-sector ATPase complex;9.77506060201318e-08!GO:0051329;interphase of mitotic cell cycle;1.1852587976349e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.20974304910358e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.20974304910358e-07!GO:0008094;DNA-dependent ATPase activity;1.24027485960834e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.51364640388184e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.51364640388184e-07!GO:0005768;endosome;1.75098009943008e-07!GO:0006752;group transfer coenzyme metabolic process;1.97490041429627e-07!GO:0005657;replication fork;2.14252142395176e-07!GO:0000245;spliceosome assembly;2.81984946495714e-07!GO:0045786;negative regulation of progression through cell cycle;2.99360661091547e-07!GO:0045333;cellular respiration;3.2536343769871e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.27088393652405e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.69248974217503e-07!GO:0003899;DNA-directed RNA polymerase activity;3.86420128281611e-07!GO:0032446;protein modification by small protein conjugation;4.42952486191896e-07!GO:0007051;spindle organization and biogenesis;4.43193102772449e-07!GO:0005813;centrosome;4.56792731899315e-07!GO:0043069;negative regulation of programmed cell death;4.86531136636359e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.98206673816794e-07!GO:0015399;primary active transmembrane transporter activity;4.98206673816794e-07!GO:0004298;threonine endopeptidase activity;5.02471549192106e-07!GO:0005815;microtubule organizing center;5.32051037832435e-07!GO:0006366;transcription from RNA polymerase II promoter;6.25938240451381e-07!GO:0007005;mitochondrion organization and biogenesis;6.50802905698772e-07!GO:0043066;negative regulation of apoptosis;7.28049552830011e-07!GO:0009117;nucleotide metabolic process;7.52073161761858e-07!GO:0006916;anti-apoptosis;7.6525699707076e-07!GO:0016567;protein ubiquitination;7.89109587346407e-07!GO:0005793;ER-Golgi intermediate compartment;8.0643300567611e-07!GO:0045259;proton-transporting ATP synthase complex;9.18912253392831e-07!GO:0065009;regulation of a molecular function;9.35532057563505e-07!GO:0006099;tricarboxylic acid cycle;9.44893065819446e-07!GO:0046356;acetyl-CoA catabolic process;9.44893065819446e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.04272896908996e-06!GO:0048523;negative regulation of cellular process;1.13504871272562e-06!GO:0043623;cellular protein complex assembly;1.57136922869473e-06!GO:0006302;double-strand break repair;1.75162538964648e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.00138967103058e-06!GO:0003690;double-stranded DNA binding;2.09281645980114e-06!GO:0006084;acetyl-CoA metabolic process;2.22673294065807e-06!GO:0008632;apoptotic program;2.34026537810761e-06!GO:0009108;coenzyme biosynthetic process;2.56705199679162e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.8861023736061e-06!GO:0019899;enzyme binding;3.66704679307797e-06!GO:0043492;ATPase activity, coupled to movement of substances;3.93969745274325e-06!GO:0005667;transcription factor complex;4.27707785088712e-06!GO:0048475;coated membrane;4.38864853710901e-06!GO:0030117;membrane coat;4.38864853710901e-06!GO:0043065;positive regulation of apoptosis;4.53069041780093e-06!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.03514356176228e-06!GO:0007059;chromosome segregation;6.18751713880887e-06!GO:0043068;positive regulation of programmed cell death;6.2933753681969e-06!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;7.78566277712316e-06!GO:0048519;negative regulation of biological process;8.15662838436497e-06!GO:0009109;coenzyme catabolic process;8.27581218887424e-06!GO:0005762;mitochondrial large ribosomal subunit;9.69028455161404e-06!GO:0000315;organellar large ribosomal subunit;9.69028455161404e-06!GO:0051168;nuclear export;1.01281540428986e-05!GO:0051187;cofactor catabolic process;1.01281540428986e-05!GO:0030120;vesicle coat;1.13399952546815e-05!GO:0030662;coated vesicle membrane;1.13399952546815e-05!GO:0000786;nucleosome;1.19029572665563e-05!GO:0000776;kinetochore;1.38831372707071e-05!GO:0003724;RNA helicase activity;1.39351136316063e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.60157528117593e-05!GO:0006917;induction of apoptosis;1.60468374307503e-05!GO:0000151;ubiquitin ligase complex;2.19977042254605e-05!GO:0007088;regulation of mitosis;2.26123922366224e-05!GO:0006613;cotranslational protein targeting to membrane;2.27532081316359e-05!GO:0012502;induction of programmed cell death;2.38457717208228e-05!GO:0006401;RNA catabolic process;2.75730617564944e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.00131620843251e-05!GO:0003713;transcription coactivator activity;3.060198004739e-05!GO:0008168;methyltransferase activity;3.63514328310641e-05!GO:0016563;transcription activator activity;3.66546415360969e-05!GO:0008033;tRNA processing;3.97700544627137e-05!GO:0005770;late endosome;4.47222927051301e-05!GO:0044440;endosomal part;4.52884690745755e-05!GO:0010008;endosome membrane;4.52884690745755e-05!GO:0006417;regulation of translation;4.80296298468309e-05!GO:0016564;transcription repressor activity;4.91431924918202e-05!GO:0006818;hydrogen transport;5.05117102521005e-05!GO:0003729;mRNA binding;5.29662975380645e-05!GO:0015992;proton transport;5.84057052041194e-05!GO:0000314;organellar small ribosomal subunit;6.7496210626351e-05!GO:0005763;mitochondrial small ribosomal subunit;6.7496210626351e-05!GO:0003682;chromatin binding;7.20666500932544e-05!GO:0004518;nuclease activity;7.21407329126818e-05!GO:0006352;transcription initiation;7.37107537366052e-05!GO:0031324;negative regulation of cellular metabolic process;9.03804458839765e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.0431344230514e-05!GO:0000082;G1/S transition of mitotic cell cycle;9.0431344230514e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;9.98697543082148e-05!GO:0007243;protein kinase cascade;0.000109828176080098!GO:0006402;mRNA catabolic process;0.00011542680310009!GO:0003684;damaged DNA binding;0.000117909553007415!GO:0006270;DNA replication initiation;0.000141274186746507!GO:0006612;protein targeting to membrane;0.00014220127725154!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000154255092463288!GO:0003678;DNA helicase activity;0.00015525151414034!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000159279705983987!GO:0008654;phospholipid biosynthetic process;0.000161125732272769!GO:0005773;vacuole;0.000161688818808143!GO:0043021;ribonucleoprotein binding;0.000172672165665585!GO:0050794;regulation of cellular process;0.000179630583581839!GO:0051052;regulation of DNA metabolic process;0.000188880961915456!GO:0007093;mitotic cell cycle checkpoint;0.00021228224298993!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000228480630446153!GO:0031326;regulation of cellular biosynthetic process;0.000270132024876243!GO:0009165;nucleotide biosynthetic process;0.000285334959894445!GO:0016363;nuclear matrix;0.000292997971151979!GO:0050790;regulation of catalytic activity;0.000293837089225476!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000294298219235427!GO:0008186;RNA-dependent ATPase activity;0.000298143478926282!GO:0003924;GTPase activity;0.000305250583120905!GO:0005885;Arp2/3 protein complex;0.000308337468145138!GO:0005637;nuclear inner membrane;0.000327287648127506!GO:0016853;isomerase activity;0.000336718602905691!GO:0006082;organic acid metabolic process;0.000345831276067062!GO:0003714;transcription corepressor activity;0.000346016050533124!GO:0019752;carboxylic acid metabolic process;0.000346772992983679!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000387614786244183!GO:0030384;phosphoinositide metabolic process;0.000387632701333417!GO:0006950;response to stress;0.000413609795492467!GO:0006383;transcription from RNA polymerase III promoter;0.000416258932616828!GO:0016251;general RNA polymerase II transcription factor activity;0.000420239772404929!GO:0043681;protein import into mitochondrion;0.000429497847489713!GO:0005525;GTP binding;0.000441579476285395!GO:0004527;exonuclease activity;0.000458220674705187!GO:0031072;heat shock protein binding;0.000477793507297657!GO:0000323;lytic vacuole;0.000481128239392961!GO:0005764;lysosome;0.000481128239392961!GO:0045454;cell redox homeostasis;0.000495900555587484!GO:0007052;mitotic spindle organization and biogenesis;0.000499256060524381!GO:0005876;spindle microtubule;0.00056956088242957!GO:0051427;hormone receptor binding;0.000575789338513096!GO:0006520;amino acid metabolic process;0.000586468316762382!GO:0000049;tRNA binding;0.000603627663081979!GO:0030880;RNA polymerase complex;0.00061327950601472!GO:0015631;tubulin binding;0.000615161282363403!GO:0046483;heterocycle metabolic process;0.000643186951762591!GO:0009892;negative regulation of metabolic process;0.000682252341682025!GO:0005048;signal sequence binding;0.000682542384259041!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000685621372611029!GO:0031982;vesicle;0.000705936413285807!GO:0005684;U2-dependent spliceosome;0.000715272197190004!GO:0009889;regulation of biosynthetic process;0.000735698655506678!GO:0051252;regulation of RNA metabolic process;0.000764041868690879!GO:0004004;ATP-dependent RNA helicase activity;0.00085275973099131!GO:0000228;nuclear chromosome;0.000861063440733338!GO:0006414;translational elongation;0.000867941610960246!GO:0006650;glycerophospholipid metabolic process;0.000980525241142687!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00102932582469981!GO:0004674;protein serine/threonine kinase activity;0.00105714916046641!GO:0043596;nuclear replication fork;0.00106431186736614!GO:0044431;Golgi apparatus part;0.00106835890966718!GO:0016859;cis-trans isomerase activity;0.00109068742730708!GO:0006091;generation of precursor metabolites and energy;0.00113524176297077!GO:0035257;nuclear hormone receptor binding;0.00114905813600588!GO:0022890;inorganic cation transmembrane transporter activity;0.00126263313050665!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00129370984020512!GO:0000428;DNA-directed RNA polymerase complex;0.00129370984020512!GO:0007006;mitochondrial membrane organization and biogenesis;0.00132754919553408!GO:0005769;early endosome;0.00139110233430153!GO:0046474;glycerophospholipid biosynthetic process;0.00140484983537246!GO:0032259;methylation;0.00147238149838875!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00148042369032787!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00148042369032787!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00148042369032787!GO:0008234;cysteine-type peptidase activity;0.00149319002392903!GO:0046489;phosphoinositide biosynthetic process;0.0015141547478428!GO:0006405;RNA export from nucleus;0.00153752020687493!GO:0043414;biopolymer methylation;0.00153752020687493!GO:0005798;Golgi-associated vesicle;0.00155551605027778!GO:0006891;intra-Golgi vesicle-mediated transport;0.00157691785836655!GO:0031988;membrane-bound vesicle;0.0015937138402556!GO:0044452;nucleolar part;0.00161416053358317!GO:0051540;metal cluster binding;0.00165298582176197!GO:0051536;iron-sulfur cluster binding;0.00165298582176197!GO:0032200;telomere organization and biogenesis;0.00166986356067586!GO:0000723;telomere maintenance;0.00166986356067586!GO:0016197;endosome transport;0.00169717755440634!GO:0032508;DNA duplex unwinding;0.0016979099085745!GO:0032392;DNA geometric change;0.0016979099085745!GO:0006289;nucleotide-excision repair;0.00177295865856464!GO:0005788;endoplasmic reticulum lumen;0.00179157237007616!GO:0007050;cell cycle arrest;0.00180718052535746!GO:0031410;cytoplasmic vesicle;0.00184237176934887!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00187631926945731!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00187631926945731!GO:0022415;viral reproductive process;0.00191824678823033!GO:0047485;protein N-terminus binding;0.00199363581777629!GO:0019222;regulation of metabolic process;0.00209433743102918!GO:0000287;magnesium ion binding;0.00221111805786215!GO:0005669;transcription factor TFIID complex;0.00223243866459619!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0025844334121897!GO:0051539;4 iron, 4 sulfur cluster binding;0.00266127039757828!GO:0009112;nucleobase metabolic process;0.00268000309411714!GO:0006284;base-excision repair;0.00268497796417922!GO:0016491;oxidoreductase activity;0.00275354041095264!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00279711688670314!GO:0006839;mitochondrial transport;0.00281791145089148!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00291121540826811!GO:0044450;microtubule organizing center part;0.00293415105169041!GO:0030658;transport vesicle membrane;0.00301589393572832!GO:0009124;nucleoside monophosphate biosynthetic process;0.00303947405738613!GO:0009123;nucleoside monophosphate metabolic process;0.00303947405738613!GO:0007242;intracellular signaling cascade;0.00309064677579096!GO:0000070;mitotic sister chromatid segregation;0.00318631611551434!GO:0000059;protein import into nucleus, docking;0.0032144838342167!GO:0000819;sister chromatid segregation;0.00322545306179245!GO:0006268;DNA unwinding during replication;0.00325883068002462!GO:0048487;beta-tubulin binding;0.00333797590369099!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00337321771698156!GO:0007017;microtubule-based process;0.00341950423380422!GO:0003725;double-stranded RNA binding;0.00343104755864615!GO:0016023;cytoplasmic membrane-bound vesicle;0.00351498683135846!GO:0000139;Golgi membrane;0.00351562580804905!GO:0032561;guanyl ribonucleotide binding;0.00354598269973367!GO:0019001;guanyl nucleotide binding;0.00354598269973367!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00354598269973367!GO:0043284;biopolymer biosynthetic process;0.0036355748822361!GO:0031968;organelle outer membrane;0.00364550770118292!GO:0005874;microtubule;0.00367835839691629!GO:0043488;regulation of mRNA stability;0.00367835839691629!GO:0043487;regulation of RNA stability;0.00367835839691629!GO:0043601;nuclear replisome;0.0038723191538515!GO:0030894;replisome;0.0038723191538515!GO:0046983;protein dimerization activity;0.00389842452105045!GO:0019867;outer membrane;0.00390874730620517!GO:0004722;protein serine/threonine phosphatase activity;0.00394389439057268!GO:0051087;chaperone binding;0.00402099435404634!GO:0031902;late endosome membrane;0.00406293873704748!GO:0008180;signalosome;0.00431420601186439!GO:0015980;energy derivation by oxidation of organic compounds;0.00441896578999606!GO:0042802;identical protein binding;0.00450015013469636!GO:0000725;recombinational repair;0.00469190289014275!GO:0000724;double-strand break repair via homologous recombination;0.00469190289014275!GO:0042393;histone binding;0.00475891069599908!GO:0031124;mRNA 3'-end processing;0.00475891069599908!GO:0030118;clathrin coat;0.00496200549825299!GO:0051338;regulation of transferase activity;0.00497370069556488!GO:0006611;protein export from nucleus;0.00500213416034885!GO:0006338;chromatin remodeling;0.00505535335794663!GO:0000922;spindle pole;0.00506316155560023!GO:0005774;vacuolar membrane;0.00511331530025639!GO:0048500;signal recognition particle;0.00516525495314661!GO:0004003;ATP-dependent DNA helicase activity;0.00522797007237768!GO:0009161;ribonucleoside monophosphate metabolic process;0.00528186951689494!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00528186951689494!GO:0006519;amino acid and derivative metabolic process;0.00536362911654239!GO:0008022;protein C-terminus binding;0.00543672437254346!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00550700574619166!GO:0015002;heme-copper terminal oxidase activity;0.00550700574619166!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00550700574619166!GO:0004129;cytochrome-c oxidase activity;0.00550700574619166!GO:0043549;regulation of kinase activity;0.00556627362987131!GO:0044262;cellular carbohydrate metabolic process;0.00556627362987131!GO:0051789;response to protein stimulus;0.00556627362987131!GO:0006986;response to unfolded protein;0.00556627362987131!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00578286073212512!GO:0008139;nuclear localization sequence binding;0.0057966596193289!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.00582721942461771!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.00582721942461771!GO:0009126;purine nucleoside monophosphate metabolic process;0.00582721942461771!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.00582721942461771!GO:0022411;cellular component disassembly;0.00585764673391708!GO:0003711;transcription elongation regulator activity;0.00590345649039438!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00591209816006331!GO:0042770;DNA damage response, signal transduction;0.00591210734582882!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00606160731962251!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0063476728924998!GO:0006595;polyamine metabolic process;0.0063476728924998!GO:0009615;response to virus;0.00643343337244688!GO:0008287;protein serine/threonine phosphatase complex;0.00676760680127327!GO:0000910;cytokinesis;0.00678373595749469!GO:0030660;Golgi-associated vesicle membrane;0.00684384935365897!GO:0006607;NLS-bearing substrate import into nucleus;0.0069342911795344!GO:0051098;regulation of binding;0.0069342911795344!GO:0030176;integral to endoplasmic reticulum membrane;0.00695526713189977!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00698821604609171!GO:0048522;positive regulation of cellular process;0.00701763588869194!GO:0016272;prefoldin complex;0.00702240242290631!GO:0031570;DNA integrity checkpoint;0.00716280869664445!GO:0000781;chromosome, telomeric region;0.00719176502098762!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00719176502098762!GO:0006007;glucose catabolic process;0.0072193465792328!GO:0008637;apoptotic mitochondrial changes;0.00725890286752162!GO:0006730;one-carbon compound metabolic process;0.00736789528455819!GO:0008312;7S RNA binding;0.00741864868147979!GO:0048468;cell development;0.00754112325582559!GO:0031577;spindle checkpoint;0.00755291339998093!GO:0004532;exoribonuclease activity;0.00779921812026552!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00779921812026552!GO:0051053;negative regulation of DNA metabolic process;0.00780942229703127!GO:0006807;nitrogen compound metabolic process;0.00780942229703127!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00782002887748474!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00812898535678554!GO:0030867;rough endoplasmic reticulum membrane;0.00842679710028846!GO:0051881;regulation of mitochondrial membrane potential;0.0085199602882598!GO:0043022;ribosome binding;0.0085199602882598!GO:0043189;H4/H2A histone acetyltransferase complex;0.00854648398633314!GO:0051090;regulation of transcription factor activity;0.00864554468747984!GO:0005765;lysosomal membrane;0.00864554468747984!GO:0043281;regulation of caspase activity;0.00869724504606702!GO:0000726;non-recombinational repair;0.00881913674166961!GO:0008276;protein methyltransferase activity;0.00881913674166961!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00887919412772753!GO:0044438;microbody part;0.00889479281976694!GO:0044439;peroxisomal part;0.00889479281976694!GO:0016584;nucleosome positioning;0.00909506135737737!GO:0006740;NADPH regeneration;0.00909506135737737!GO:0006098;pentose-phosphate shunt;0.00909506135737737!GO:0005741;mitochondrial outer membrane;0.00916844270415795!GO:0033116;ER-Golgi intermediate compartment membrane;0.00937224670443704!GO:0016605;PML body;0.0094030632444097!GO:0003887;DNA-directed DNA polymerase activity;0.00965627435861086!GO:0006506;GPI anchor biosynthetic process;0.00971019278710422!GO:0044437;vacuolar part;0.00972511399217821!GO:0006144;purine base metabolic process;0.00973531298521679!GO:0008408;3'-5' exonuclease activity;0.0099972659681665!GO:0006275;regulation of DNA replication;0.0101495159404696!GO:0019318;hexose metabolic process;0.010246503940289!GO:0000792;heterochromatin;0.0103104950612908!GO:0046467;membrane lipid biosynthetic process;0.0103154681280063!GO:0000178;exosome (RNase complex);0.010444616594452!GO:0005996;monosaccharide metabolic process;0.010444616594452!GO:0048471;perinuclear region of cytoplasm;0.010451408344862!GO:0045859;regulation of protein kinase activity;0.0104625073078974!GO:0031903;microbody membrane;0.0104625073078974!GO:0005778;peroxisomal membrane;0.0104625073078974!GO:0000152;nuclear ubiquitin ligase complex;0.0104865185647236!GO:0008017;microtubule binding;0.0109077502233707!GO:0004860;protein kinase inhibitor activity;0.0110133620969782!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0110356693484924!GO:0046982;protein heterodimerization activity;0.0111061440985421!GO:0030663;COPI coated vesicle membrane;0.0111688659067038!GO:0030126;COPI vesicle coat;0.0111688659067038!GO:0006505;GPI anchor metabolic process;0.0112577955949606!GO:0031123;RNA 3'-end processing;0.0114858806284568!GO:0019783;small conjugating protein-specific protease activity;0.0114858806284568!GO:0051235;maintenance of localization;0.011604350518407!GO:0045045;secretory pathway;0.0116515510636404!GO:0000123;histone acetyltransferase complex;0.0117493593910128!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0118071043895405!GO:0007346;regulation of progression through mitotic cell cycle;0.0118522327290603!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0121447613676802!GO:0045047;protein targeting to ER;0.0121447613676802!GO:0046822;regulation of nucleocytoplasmic transport;0.012416543957839!GO:0003746;translation elongation factor activity;0.0124928243808013!GO:0004843;ubiquitin-specific protease activity;0.0125224374853566!GO:0030119;AP-type membrane coat adaptor complex;0.0132741299157052!GO:0035267;NuA4 histone acetyltransferase complex;0.0134687875865713!GO:0006672;ceramide metabolic process;0.0134687875865713!GO:0000339;RNA cap binding;0.0135111506143583!GO:0005832;chaperonin-containing T-complex;0.0136166632080576!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0136330439396664!GO:0010257;NADH dehydrogenase complex assembly;0.0136330439396664!GO:0033108;mitochondrial respiratory chain complex assembly;0.0136330439396664!GO:0016569;covalent chromatin modification;0.0138961134776917!GO:0046519;sphingoid metabolic process;0.013930935771631!GO:0051348;negative regulation of transferase activity;0.0140091268172222!GO:0051452;cellular pH reduction;0.0140518546579554!GO:0051453;regulation of cellular pH;0.0140518546579554!GO:0045851;pH reduction;0.0140518546579554!GO:0006919;caspase activation;0.0140518546579554!GO:0005663;DNA replication factor C complex;0.0141483327616829!GO:0006626;protein targeting to mitochondrion;0.0141483849422693!GO:0006376;mRNA splice site selection;0.0141640333136435!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0141640333136435!GO:0033673;negative regulation of kinase activity;0.0141640333136435!GO:0006469;negative regulation of protein kinase activity;0.0141640333136435!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0141901867163759!GO:0030137;COPI-coated vesicle;0.0145040138330674!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0145625622314072!GO:0050662;coenzyme binding;0.0145738806085051!GO:0046966;thyroid hormone receptor binding;0.014719050078082!GO:0044454;nuclear chromosome part;0.0150923529597202!GO:0009308;amine metabolic process;0.01578444654655!GO:0018193;peptidyl-amino acid modification;0.01578444654655!GO:0009451;RNA modification;0.0158361427743358!GO:0016790;thiolester hydrolase activity;0.0158361427743358!GO:0007034;vacuolar transport;0.0160959505306105!GO:0031252;leading edge;0.0167695942553932!GO:0008538;proteasome activator activity;0.016868910067066!GO:0005652;nuclear lamina;0.0169811063861515!GO:0019210;kinase inhibitor activity;0.0170085665783218!GO:0032940;secretion by cell;0.017713973062763!GO:0000096;sulfur amino acid metabolic process;0.0179890846053807!GO:0050789;regulation of biological process;0.0181970390891392!GO:0000793;condensed chromosome;0.0188001569370352!GO:0030641;cellular hydrogen ion homeostasis;0.0189480737068954!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0192112428424311!GO:0030131;clathrin adaptor complex;0.0194748207047838!GO:0045936;negative regulation of phosphate metabolic process;0.0197146588182991!GO:0051223;regulation of protein transport;0.0202887489883837!GO:0007004;telomere maintenance via telomerase;0.0203067741351655!GO:0006497;protein amino acid lipidation;0.0203724105277744!GO:0051092;activation of NF-kappaB transcription factor;0.0203724105277744!GO:0046365;monosaccharide catabolic process;0.0209915787667015!GO:0008610;lipid biosynthetic process;0.0217410010554536!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0219153872372729!GO:0016481;negative regulation of transcription;0.0220385424361855!GO:0000118;histone deacetylase complex;0.0222620636946142!GO:0016788;hydrolase activity, acting on ester bonds;0.0225893717711584!GO:0019079;viral genome replication;0.0225893717711584!GO:0019901;protein kinase binding;0.0230684361010585!GO:0016585;chromatin remodeling complex;0.0236624528417296!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0238838377851625!GO:0046426;negative regulation of JAK-STAT cascade;0.0239567813251232!GO:0030518;steroid hormone receptor signaling pathway;0.0246593355426562!GO:0001824;blastocyst development;0.0250068191670676!GO:0000077;DNA damage checkpoint;0.0250948678933666!GO:0008213;protein amino acid alkylation;0.0256426851662696!GO:0006479;protein amino acid methylation;0.0256426851662696!GO:0005092;GDP-dissociation inhibitor activity;0.0259973302039266!GO:0017134;fibroblast growth factor binding;0.0261888788868565!GO:0008156;negative regulation of DNA replication;0.0262469494432613!GO:0046164;alcohol catabolic process;0.0263447736246169!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0265911583509558!GO:0000209;protein polyubiquitination;0.0265911583509558!GO:0004177;aminopeptidase activity;0.0272739613171047!GO:0051297;centrosome organization and biogenesis;0.0276729907376343!GO:0031023;microtubule organizing center organization and biogenesis;0.0276729907376343!GO:0006406;mRNA export from nucleus;0.0277207574119678!GO:0040029;regulation of gene expression, epigenetic;0.0277303733677497!GO:0004221;ubiquitin thiolesterase activity;0.0279546995829296!GO:0046112;nucleobase biosynthetic process;0.028193876637491!GO:0042162;telomeric DNA binding;0.028349911912053!GO:0031323;regulation of cellular metabolic process;0.0285215661103746!GO:0030433;ER-associated protein catabolic process;0.028543596992974!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.028543596992974!GO:0030521;androgen receptor signaling pathway;0.028793621236218!GO:0005784;translocon complex;0.0288338664510551!GO:0031647;regulation of protein stability;0.0288338664510551!GO:0019843;rRNA binding;0.0293820090741756!GO:0009303;rRNA transcription;0.0294194142546475!GO:0043433;negative regulation of transcription factor activity;0.029448340827863!GO:0030508;thiol-disulfide exchange intermediate activity;0.0297608992113632!GO:0006378;mRNA polyadenylation;0.0301084785491217!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0303906071419745!GO:0019320;hexose catabolic process;0.0313038948187907!GO:0004576;oligosaccharyl transferase activity;0.0314268975033128!GO:0005869;dynactin complex;0.032080051121621!GO:0006266;DNA ligation;0.0323198444034509!GO:0019206;nucleoside kinase activity;0.0323198444034509!GO:0000738;DNA catabolic process, exonucleolytic;0.0323877368271932!GO:0016311;dephosphorylation;0.0325125291563588!GO:0006778;porphyrin metabolic process;0.0330166071101461!GO:0033013;tetrapyrrole metabolic process;0.0330166071101461!GO:0046979;TAP2 binding;0.0330166722323654!GO:0046977;TAP binding;0.0330166722323654!GO:0046978;TAP1 binding;0.0330166722323654!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0333084923751708!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0333855863779196!GO:0030134;ER to Golgi transport vesicle;0.0335273226925209!GO:0016570;histone modification;0.0341729688814727!GO:0016126;sterol biosynthetic process;0.0343738886837975!GO:0008250;oligosaccharyl transferase complex;0.0345769924293667!GO:0050811;GABA receptor binding;0.0347755587468402!GO:0019238;cyclohydrolase activity;0.0347755587468402!GO:0005521;lamin binding;0.0354653742761473!GO:0019058;viral infectious cycle;0.0355045154408568!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0358075509863671!GO:0009262;deoxyribonucleotide metabolic process;0.0358640627180352!GO:0006278;RNA-dependent DNA replication;0.0359544877687882!GO:0001836;release of cytochrome c from mitochondria;0.0364363753230291!GO:0007021;tubulin folding;0.0364433187252406!GO:0043621;protein self-association;0.0369245828777841!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0371342205179275!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0371342205179275!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0371342205179275!GO:0042326;negative regulation of phosphorylation;0.0375835415937726!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0377079021904262!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0377079021904262!GO:0009116;nucleoside metabolic process;0.0377744295855941!GO:0006596;polyamine biosynthetic process;0.037798634550938!GO:0030125;clathrin vesicle coat;0.0378630233189871!GO:0030665;clathrin coated vesicle membrane;0.0378630233189871!GO:0001772;immunological synapse;0.0389024877626288!GO:0000175;3'-5'-exoribonuclease activity;0.0389134231600722!GO:0009967;positive regulation of signal transduction;0.039154959688137!GO:0004721;phosphoprotein phosphatase activity;0.0392253859183899!GO:0030127;COPII vesicle coat;0.0397312275903908!GO:0012507;ER to Golgi transport vesicle membrane;0.0397312275903908!GO:0004540;ribonuclease activity;0.0400957081975373!GO:0004523;ribonuclease H activity;0.0419166047971937!GO:0006779;porphyrin biosynthetic process;0.0420694589821793!GO:0033014;tetrapyrrole biosynthetic process;0.0420694589821793!GO:0009081;branched chain family amino acid metabolic process;0.0421164838619378!GO:0043624;cellular protein complex disassembly;0.0422291949534919!GO:0008047;enzyme activator activity;0.0422527291303231!GO:0045926;negative regulation of growth;0.0428148703897143!GO:0043280;positive regulation of caspase activity;0.0436493103749415!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0438350936376894!GO:0007040;lysosome organization and biogenesis;0.0441657261781377!GO:0008537;proteasome activator complex;0.0442678268123369!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0446677947728726!GO:0050178;phenylpyruvate tautomerase activity;0.0447329597347001!GO:0045069;regulation of viral genome replication;0.0448531551135797!GO:0008097;5S rRNA binding;0.0455200337236576!GO:0031371;ubiquitin conjugating enzyme complex;0.0462133051250738!GO:0016301;kinase activity;0.0465112811189905!GO:0005095;GTPase inhibitor activity;0.0467137702003375!GO:0006301;postreplication repair;0.0468074725519928!GO:0006415;translational termination;0.0468227258782862!GO:0042158;lipoprotein biosynthetic process;0.0469630615515445!GO:0033170;DNA-protein loading ATPase activity;0.0470580912966626!GO:0003689;DNA clamp loader activity;0.0470580912966626!GO:0032507;maintenance of cellular protein localization;0.0482511744422344!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0494698305092886!GO:0000097;sulfur amino acid biosynthetic process;0.0495331717561728!GO:0042809;vitamin D receptor binding;0.0495441624015135
 |sample_id=10777
 |sample_note=
@@ Line 76: / Line 102: @@
 |sample_tissue=blood
 |top_motifs=E2F1..5:1.76777210865;RORA:1.71667065527;MYB:1.67925638785;ELF1,2,4:1.52264803499;POU2F1..3:1.5048475823;NFY{A,B,C}:1.44544116374;ZNF148:1.44201998678;TLX2:1.36271898727;RUNX1..3:1.35029789309;PAX3,7:1.30463456862;IKZF2:1.27881306772;ZBTB16:1.27071386673;PBX1:1.17758145375;TOPORS:1.10497393103;AIRE:1.0869710463;ELK1,4_GABP{A,B1}:1.07974960046;NRF1:1.04780225981;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.03928311077;PAX4:0.99288572269;PITX1..3:0.926268558028;CRX:0.916302344948;NFIX:0.863974676518;FOXP1:0.812408929552;DMAP1_NCOR{1,2}_SMARC:0.804415247314;NKX3-1:0.795684187808;BREu{core}:0.743963576001;SPI1:0.726249676427;TFDP1:0.708549064608;CDX1,2,4:0.661852129635;YY1:0.653742889195;T:0.60863521867;ETS1,2:0.604800358987;POU1F1:0.581541107031;HOX{A6,A7,B6,B7}:0.555120327073;CEBPA,B_DDIT3:0.515990584977;ALX1:0.513985751059;IRF1,2:0.512827403099;NKX6-1,2:0.506163471355;GATA6:0.484451613514;NR5A1,2:0.483383239855;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.457666555624;CUX2:0.437477048961;PAX6:0.35999722093;FOXP3:0.349232586971;MYOD1:0.343550527396;RXRA_VDR{dimer}:0.332306892689;ZNF143:0.315700988088;FOXA2:0.315393591681;HAND1,2:0.312874636701;IRF7:0.308639177064;NKX2-1,4:0.299338233675;FOX{I1,J2}:0.273971545079;SPIB:0.271590715986;ATF5_CREB3:0.268739943242;POU5F1:0.253119763866;CREB1:0.245029120874;PDX1:0.226892615017;STAT5{A,B}:0.214065021138;ZNF384:0.190097633059;HES1:0.163415252327;SOX{8,9,10}:0.157782116699;PPARG:0.132625750553;AHR_ARNT_ARNT2:0.123512965994;GFI1:0.105247640705;FOX{F1,F2,J1}:0.104251331704;OCT4_SOX2{dimer}:0.095256521696;STAT2,4,6:0.0854827379472;PRRX1,2:0.0689537000116;HBP1_HMGB_SSRP1_UBTF:0.0618869445425;ATF4:0.0568752771604;FOXQ1:0.0431621261433;NKX2-2,8:0.0429996100203;BPTF:0.0225723638506;FOXM1:-0.0169758247179;GCM1,2:-0.0193596897061;ZEB1:-0.0295464053194;LEF1_TCF7_TCF7L1,2:-0.0318254363442;FOXD3:-0.0436495377788;EN1,2:-0.0452963727733;EVI1:-0.0507428103488;RFX2..5_RFXANK_RFXAP:-0.0602418385823;bHLH_family:-0.0936831310096;HMGA1,2:-0.105927922023;TGIF1:-0.114900256079;SREBF1,2:-0.140776024559;NFKB1_REL_RELA:-0.157182383054;HNF4A_NR2F1,2:-0.185206679101;MYFfamily:-0.191108905259;NR1H4:-0.197550010232;VSX1,2:-0.19920416453;SNAI1..3:-0.202086268033;HNF1A:-0.209826809001;PAX8:-0.211177766635;PAX2:-0.231134482537;ARID5B:-0.258100628241;UFEwm:-0.324899509621;ZNF238:-0.334735650245;AR:-0.344424927981;NFE2:-0.366280817917;ADNP_IRX_SIX_ZHX:-0.404244266806;FOS_FOS{B,L1}_JUN{B,D}:-0.412634514365;NANOG{mouse}:-0.421378904322;DBP:-0.425614176806;NR6A1:-0.428798440972;ESR1:-0.457772938187;LHX3,4:-0.462732098127;FOSL2:-0.474844431367;NKX2-3_NKX2-5:-0.478161916454;HLF:-0.482891912567;CDC5L:-0.50923897283;SOX5:-0.538192550493;BACH2:-0.557480435046;ATF2:-0.559247927119;NANOG:-0.560423774001;ESRRA:-0.571092543636;MTF1:-0.585294304709;GATA4:-0.607598628611;HSF1,2:-0.608005460617;FOX{D1,D2}:-0.642289118763;HOX{A5,B5}:-0.647497244668;HMX1:-0.65557181828;SRF:-0.661798295186;LMO2:-0.664076188081;TEF:-0.672897059564;RREB1:-0.675173624759;NFE2L1:-0.702093848004;EP300:-0.706530972568;TBP:-0.706771392246;NFE2L2:-0.708190452422;GTF2A1,2:-0.718353702603;POU3F1..4:-0.720070013738;HOXA9_MEIS1:-0.724545225321;FOXO1,3,4:-0.734572419829;SOX2:-0.752515421606;TFAP4:-0.753174163721;NKX3-2:-0.759761391712;ZIC1..3:-0.781162644362;MEF2{A,B,C,D}:-0.790726133668;ZNF423:-0.81741900629;NR3C1:-0.836955763645;REST:-0.838053095289;ALX4:-0.852661721973;ZFP161:-0.853738676917;TAL1_TCF{3,4,12}:-0.897585239728;TFCP2:-0.897820832872;ONECUT1,2:-0.901901275848;HOX{A4,D4}:-0.909347525686;GLI1..3:-0.920080178532;XCPE1{core}:-0.933749107542;NFIL3:-0.938020755189;FOXN1:-0.943412349558;SPZ1:-0.954326586539;ATF6:-0.972404708231;TBX4,5:-0.977199374521;JUN:-0.990136989193;GFI1B:-1.03233202885;STAT1,3:-1.04647028807;RFX1:-1.04731276019;MYBL2:-1.04868745603;KLF4:-1.09588343993;TFAP2B:-1.0985613453;RBPJ:-1.10214652179;SMAD1..7,9:-1.11038896146;POU6F1:-1.13031277339;ZBTB6:-1.13972575748;TP53:-1.1399995865;NFATC1..3:-1.14559814778;SOX17:-1.19615078229;PAX5:-1.2398237084;MAZ:-1.26187382852;PRDM1:-1.262209479;MED-1{core}:-1.26366726691;IKZF1:-1.27125795485;HIC1:-1.28820772686;GZF1:-1.29591699583;EGR1..3:-1.29952580069;NHLH1,2:-1.33019487243;MAFB:-1.34351200923;MTE{core}:-1.38915268445;SP1:-1.41436556028;HIF1A:-1.42896108429;FOXL1:-1.44943769059;GTF2I:-1.46613481382;TEAD1:-1.52943100821;PATZ1:-1.53987172471;PAX1,9:-1.58367022619;RXR{A,B,G}:-1.64503140642;XBP1:-1.7618663683;EBF1:-1.89164429775;TLX1..3_NFIC{dimer}:-1.90190987077;TFAP2{A,C}:-1.91104246983;MZF1:-1.96937369993
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10777-110G3;search_select_hide=table117:FF:10777-110G3
 }}

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FF:10777-110G3: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 15:03, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0