FF:11833-124G6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005954 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008556;DRR009428;DRZ000853;DRZ002238;DRZ012203;DRZ013588 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002119,UBERON:0003100,UBERON:0000474 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000273 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr17:46132044..46132080,+!p4@NFE2L1!1.64!42.28!NFE2L1;;chr1:170632285..170632309,+!p1@PRRX1!1.54!37.78!PRRX1;;chr19:46801639..46801699,+!p1@HIF3A!1.54!33.74!HIF3A;;chr1:170632137..170632172,+!p10@PRRX1!1.52!32.39!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!1.46!72.87!HMGA2;;chr1:170632115..170632136,+!p9@PRRX1!1.45!27.44!PRRX1;;chr19:42636586..42636607,-!p1@POU2F2!1.41!67.47!POU2F2;;chr12:66218598..66218645,+!p2@HMGA2!1.38!103.90!HMGA2;;chr1:170632051..170632081,+!p16@PRRX1!1.30!18.89!PRRX1;;chr6:134210243..134210257,+!p1@TCF21!1.30!18.89!TCF21;;chr8:72756063..72756125,-!p1@MSC!1.26!34.19!MSC;;chr8:72756267..72756296,-!p4@MSC!1.22!22.94!MSC;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.22!15.74!HOXC5;;chr8:49833948..49833973,-!p2@SNAI2!1.20!93.11!SNAI2;;chr9:4300050..4300118,-!p1@GLIS3!1.13!81.86!GLIS3;;chr1:170632439..170632465,+!p11@PRRX1!1.13!12.59!PRRX1;;chr1:170632028..170632043,+!p20@PRRX1!1.12!12.14!PRRX1;;chr12:66218836..66218888,+!p1@HMGA2!1.10!109.30!HMGA2;;chr8:72756637..72756664,-!p3@MSC!1.10!13.04!MSC;;chr17:46126136..46126152,+!p1@NFE2L1!1.09!582.05!NFE2L1;;chr8:72756213..72756243,-!p5@MSC!1.08!14.39!MSC;;chr8:72756667..72756736,-!p2@MSC!1.05!16.19!MSC;;chr12:66218212..66218244,+!p5@HMGA2!1.03!14.39!HMGA2;;chr6:45296048..45296082,+!p1@RUNX2!1.03!11.25!RUNX2;;chr1:158979872..158979898,+!p3@IFI16!1.02!29.69!IFI16;;chr8:49833978..49833996,-!p1@SNAI2!1.00!186.67!SNAI2;;chr8:55370487..55370503,+!p1@SOX17!1.00!9.00!SOX17;;chr1:37940170..37940190,+!p1@ZC3H12A!0.99!110.20!ZC3H12A;;chr1:170632959..170632987,+!p4@PRRX1!0.98!9.45!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.98!8.55!PRRX1;;chr12:66218183..66218209,+!p4@HMGA2!0.96!15.74!HMGA2;;chr1:170633348..170633399,+!p2@PRRX1!0.96!11.25!PRRX1;;chr10:31288398..31288455,-!p2@ZNF438!0.96!9.45!ZNF438;;chr15:83953397..83953425,-!p1@BNC1!0.96!9.45!BNC1;;chr2:176994408..176994492,+!p1@HOXD8!0.94!7.65!HOXD8;;chr7:26191809..26191890,+!p1@NFE2L3!0.93!38.23!NFE2L3;;chr3:101546827..101546847,+!p2@NFKBIZ!0.93!10.80!NFKBIZ;;chr2:145275162..145275202,-!p2@ZEB2!0.92!44.98!ZEB2;;chr2:239756671..239756732,+!p1@TWIST2!0.92!24.29!TWIST2;;chr8:11561684..11561751,+!p1@GATA4!0.91!7.20!GATA4;;chr1:170632477..170632506,+!p6@PRRX1!0.91!7.20!PRRX1;;chr12:77459306..77459365,-!p1@E2F7!0.90!89.96!E2F7;;chr3:141087393..141087426,+!p3@ZBTB38!0.89!27.89!ZBTB38;;chr12:66218378..66218401,+!p6@HMGA2!0.89!10.80!HMGA2;;chr12:66218420..66218439,+!p12@HMGA2!0.89!6.75!HMGA2;;chr8:72755987..72756002,-!p7@MSC!0.89!6.75!MSC;;chr22:38598086..38598105,+!p1@MAFF!0.88!74.22!MAFF;;chr12:66218443..66218461,+!p8@HMGA2!0.88!8.55!HMGA2;;chr12:57914286..57914304,-!p1@DDIT3!0.86!239.75!DDIT3;;chr2:66662281..66662308,+!p1@MEIS1!0.86!22.94!MEIS1;;chr2:102091566..102091581,-!p1@RFX8!0.86!6.30!RFX8;;chr12:66218904..66218913,+!p11@HMGA2!0.86!6.30!HMGA2;;chr17:46622070..46622109,-!p1@HOXB2!0.83!13.49!HOXB2;;chr6:34204921..34204939,+!p3@HMGA1!0.82!180.37!HMGA1;;chr9:4299979..4299996,-!p3@GLIS3!0.82!9.45!GLIS3;;chr21:30671690..30671762,+!p2@BACH1!0.81!19.79!BACH1;;chr17:41622765..41622821,-!p2@ETV4!0.81!8.55!ETV4;;chr17:41622925..41622976,-!p3@ETV4!0.81!8.55!ETV4;;chr12:66218003..66218018,+!p9@HMGA2!0.81!6.75!HMGA2;;chr2:101591314..101591333,+!p2@NPAS2!0.81!6.30!NPAS2;;chr12:66218469..66218477,+!p16@HMGA2!0.81!5.40!HMGA2;;chr13:45010939..45011033,-!p1@TSC22D1!0.80!383.68!TSC22D1;;chr2:185463247..185463263,+!p1@ZNF804A!0.80!9.90!ZNF804A;;chr2:239756739..239756755,+!p2@TWIST2!0.80!9.45!TWIST2;;chr3:101568349..101568365,+!p1@NFKBIZ!0.78!290.12!NFKBIZ;;chr18:3450293..3450304,+!p4@TGIF1!0.78!13.04!TGIF1;;chr2:28618532..28618610,+!p4@FOSL2!0.78!9.00!FOSL2;;chr2:66662249..66662267,+!p2@MEIS1!0.77!20.24!MEIS1;;chr8:72756380..72756427,-!p8@MSC!0.77!4.95!MSC;;chr12:66218923..66218934,+!p14@HMGA2!0.77!4.95!HMGA2;;chr3:141105705..141105770,+!p4@ZBTB38!0.76!5.85!ZBTB38;;chr8:72756023..72756055,-!p6@MSC!0.75!5.85!MSC;;chr15:42749722..42749739,-!p2@ZFP106!0.74!8.55!ZFP106;;chr3:141121847..141121868,+!p5@ZBTB38!0.74!7.20!ZBTB38;;chr20:48807648..48807671,+!p9@CEBPB!0.74!6.75!CEBPB;;chr1:170632723..170632739,+!p8@PRRX1!0.74!4.50!PRRX1;;chr2:102091144..102091183,-!p2@RFX8!0.74!4.50!RFX8;;chr4:174451370..174451387,-!p1@HAND2!0.74!4.50!HAND2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.74!4.50!HOXC5;;chr8:116681409..116681431,-!p2@TRPS1!0.73!13.04!TRPS1;;chr17:46621937..46621966,-!p2@HOXB2!0.73!13.04!HOXB2;;chr12:66218573..66218596,+!p7@HMGA2!0.73!6.75!HMGA2;;chr5:131826457..131826514,-!p1@IRF1!0.72!186.67!IRF1;;chr2:101436564..101436647,+!p1@NPAS2!0.72!98.51!NPAS2;;chr2:200323414..200323455,-!p1@SATB2!0.72!9.90!SATB2;;chr1:170633262..170633285,+!p3@PRRX1!0.72!4.95!PRRX1;;chr1:221053049..221053075,+!p3@HLX!0.71!7.65!HLX;;chr2:200322654..200322707,-!p2@SATB2!0.71!6.30!SATB2;;chr12:24715376..24715432,-!p1@SOX5!0.71!5.40!SOX5;;chr12:26277956..26277980,-!p1@BHLHE41!0.70!16.19!BHLHE41;;chr8:116681150..116681164,-!p5@TRPS1!0.70!8.55!TRPS1;;chr20:50721803..50721857,-!p2@ZFP64!0.70!6.75!ZFP64;;chr4:174450089..174450153,-!p2@HAND2!0.70!4.05!HAND2;;chr1:158979851..158979865,+!p5@IFI16!0.69!9.45!IFI16;;chr4:87857474..87857489,+!p7@AFF1!0.69!7.20!AFF1;;chr17:46622114..46622138,-!p4@HOXB2!0.69!6.30!HOXB2;;chr17:46622440..46622477,-!p5@HOXB2!0.69!4.50!HOXB2;;chr12:80085255..80085284,-!p9@PAWR!0.68!5.85!PAWR;;chr17:46622205..46622218,-!p3@HOXB2!0.68!4.50!HOXB2;;chr20:48807351..48807384,+!p1@CEBPB!0.67!440.81!CEBPB;;chr18:3450161..3450183,+!p1@TGIF1!0.67!145.29!TGIF1;;chr8:116681123..116681143,-!p4@TRPS1!0.67!7.65!TRPS1;;chr9:4300016..4300039,-!p2@GLIS3!0.67!6.75!GLIS3;;chr1:158979792..158979814,+!p2@IFI16!0.66!39.58!IFI16;;chr3:141121369..141121392,+!p14@ZBTB38!0.66!4.50!ZBTB38;;chr8:116681194..116681214,-!p1@TRPS1!0.65!37.33!TRPS1;;chr11:46299199..46299233,+!p1@CREB3L1!0.65!20.69!CREB3L1;;chr14:24837368..24837401,+!p1@NFATC4!0.65!9.00!NFATC4;;chr2:46524537..46524553,+!p1@EPAS1!0.64!394.93!EPAS1;;chr20:48807456..48807475,+!p3@CEBPB!0.64!7.20!CEBPB;;chr21:36260343..36260402,-!p6@RUNX1!0.64!5.85!RUNX1;;chr18:3450334..3450341,+!p15@TGIF1!0.64!4.50!TGIF1;;chr14:62162258..62162269,+!p2@HIF1A!0.63!37.33!HIF1A;;chr6:34205372..34205412,+!p5@HMGA1!0.63!19.34!HMGA1;;chr12:115121962..115121987,-!p1@TBX3!0.62!31.49!TBX3;;chr9:4299959..4299974,-!p4@GLIS3!0.62!5.40!GLIS3;;chr12:26277817..26277863,-!p2@BHLHE41!0.62!4.50!BHLHE41;;chr12:54447599..54447630,+!p3@HOXC4!0.62!4.05!HOXC4;;chr20:48807548..48807572,+!p14@CEBPB!0.62!4.05!CEBPB;;chr1:170632647..170632659,+!p17@PRRX1!0.62!3.15!PRRX1;;chr14:64761083..64761101,-!p1@ESR2!0.62!3.15!ESR2;;chr6:152011654..152011682,+!p1@ESR1!0.62!3.15!ESR1;;chr8:72756194..72756208,-!p9@MSC!0.62!3.15!MSC;;chr22:21771656..21771662,+!p1@HIC2!0.62!3.15!HIC2;;chr2:102091478..102091490,-!p3@RFX8!0.62!3.15!RFX8;;chr2:113999360..113999386,-!p4@PAX8!0.62!3.15!PAX8;;chr2:66662510..66662521,+!p6@MEIS1!0.62!3.15!MEIS1;;chr16:86612320..86612394,+!p1@FOXL1!0.62!3.15!FOXL1;;chr4:87857491..87857519,+!p10@AFF1!0.61!4.50!AFF1;;chr11:65667884..65667895,-!p2@FOSL1!0.60!13.49!FOSL1;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.60!5.40!MEIS3P1;;chr19:31840130..31840160,-!p2@TSHZ3!0.60!4.95!TSHZ3;;chr7:106809470..106809481,+!p2@HBP1!0.60!4.50!HBP1;;chr20:50179368..50179392,-!p2@NFATC2!0.60!4.05!NFATC2;;chr12:56753869..56753930,-!p1@STAT2!0.59!157.88!STAT2;;chr11:65430554..65430579,-!p3@RELA!0.59!8.55!RELA;;chr14:35872453..35872485,-!p2@NFKBIA!0.59!8.10!NFKBIA;;chr12:48298765..48298783,-!p2@VDR!0.59!6.75!VDR;;chr17:20492136..20492165,+!p1@MEIS3P2!0.59!4.95!MEIS3P2;;chr7:44143925..44143970,+!p1@AEBP1!0.58!77.82!AEBP1;;chr19:45504688..45504782,+!p1@RELB!0.58!20.69!RELB;;chr7:19157043..19157088,-!p2@TWIST1!0.58!8.10!TWIST1;;chr8:23540441..23540466,-!p1@NKX3-1!0.58!6.30!NKX3-1;;chr18:3449586..3449617,+!p8@TGIF1!0.58!4.95!TGIF1;;chr8:128747757..128747800,+!p7@MYC!0.58!4.05!MYC;;chr2:145275228..145275241,-!p11@ZEB2!0.58!3.60!ZEB2;;chr10:63809106..63809127,+!p1@ARID5B!0.57!45.88!ARID5B;;chr22:38597987..38598021,+!p2@MAFF!0.57!20.24!MAFF;;chr20:42543441..42543497,+!p1@TOX2!0.57!14.84!TOX2;;chr18:22932080..22932170,-!p1@ZNF521!0.57!13.94!ZNF521;;chr16:54320646..54320672,-!p2@IRX3!0.57!4.50!IRX3;;chr1:158985493..158985535,+!p4@IFI16!0.57!4.50!IFI16;;chr16:86544113..86544145,+!p1@FOXF1!0.57!3.60!FOXF1;;chr2:66662895..66662907,+!p3@MEIS1!0.57!3.60!MEIS1;;chr9:4300004..4300015,-!p6@GLIS3!0.57!3.15!GLIS3;;chr1:170632108..170632114,+!p29@PRRX1!0.57!2.70!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.57!2.70!PRRX1;;chr7:150102756..150102772,+!p5@ZNF775!0.57!2.70!ZNF775;;chr10:64018918..64018936,+!p2@ZNF365!0.57!2.70!ZNF365;;chr12:10870927..10870966,-!p5@CSDA!0.57!2.70!CSDA;;chr2:66662396..66662407,+!p4@MEIS1!0.57!2.70!MEIS1;;chr3:141121871..141121885,+!p13@ZBTB38!0.57!2.70!ZBTB38;;chr17:41622731..41622764,-!p5@ETV4!0.57!2.70!ETV4;;chr17:46682321..46682362,-!p1@HOXB6!0.57!2.70!HOXB6;;chr3:141087339..141087387,+!p2@ZBTB38!0.56!33.29!ZBTB38;;chr14:35872926..35872951,-!p4@NFKBIA!0.56!4.05!NFKBIA;;chr7:44143997..44144008,+!p3@AEBP1!0.56!3.60!AEBP1;;chr17:46675420..46675465,-!p3@HOXB6!0.56!3.15!HOXB6;;chr20:48807875..48807982,+!p2@CEBPB!0.55!70.17!CEBPB;;chr3:114343768..114343822,-!p1@ZBTB20!0.55!13.49!ZBTB20;;chr14:35872962..35873025,-!p3@NFKBIA!0.55!7.65!NFKBIA;;chr11:61520075..61520136,+!p1@C11orf9!0.55!6.30!C11orf9;;chr14:62203595..62203676,+!p4@HIF1A!0.55!5.40!HIF1A;;chr20:2673383..2673441,+!p1@EBF4!0.55!4.50!EBF4;;chr6:34204672..34204692,+!p1@HMGA1!0.54!353.55!HMGA1;;chr8:106330656..106330684,+!p1@ZFPM2!0.54!7.65!ZFPM2;;chr10:63809134..63809145,+!p6@ARID5B!0.54!6.75!ARID5B;;chr17:41623009..41623053,-!p4@ETV4!0.54!4.50!ETV4;;chr20:48807779..48807802,+!p10@CEBPB!0.54!4.50!CEBPB;;chr21:36260295..36260310,-!p3@RUNX1!0.54!4.50!RUNX1;;chr12:72056800..72056834,+!p1@THAP2!0.54!3.60!THAP2;;chr14:62162285..62162296,+!p3@HIF1A!0.53!15.74!HIF1A;;chr19:59084872..59084920,-!p2@MZF1!0.53!7.65!MZF1;;chr18:3449695..3449712,+!p9@TGIF1!0.53!4.05!TGIF1;;chr17:46127997..46128015,+!p5@NFE2L1!0.53!3.60!NFE2L1;;chr11:65667846..65667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CREB3L1!0.23!0.90!CREB3L1;;chr13:73636516..73636532,+!p3@KLF5!0.23!0.90!KLF5;;chr9:128509857..128509872,+!p6@PBX3!0.23!0.90!PBX3;;chr8:80680024..80680046,-!p2@HEY1!0.23!0.90!HEY1;;chr16:31454084..31454115,-!p1@ZNF843!0.23!0.90!ZNF843;;chr19:12175596..12175605,+!p4@ZNF844!0.23!0.90!ZNF844;;chr2:70314849..70314860,+!p3@PCBP1!0.22!21.59!PCBP1;;chr12:96588143..96588185,+!p1@ELK3!0.22!17.54!ELK3;;chr6:7107939..7107993,+!p1@RREB1!0.22!17.09!RREB1;;chr19:57999101..57999158,+!p1@ZNF419!0.22!9.45!ZNF419;;chr19:44507091..44507163,+!p1@ZNF230!0.22!5.85!ZNF230;;chr21:47063625..47063658,+!p1@PCBP3!0.22!5.85!PCBP3;;chr16:73092898..73092931,-!p1@ZFHX3!0.22!4.95!ZFHX3;;chr1:67396044..67396071,+!p3@MIER1!0.22!4.50!MIER1;;chr16:89787402..89787430,+!p2@ZNF276!0.22!4.05!ZNF276;;chr2:42795651..42795676,+!p3@MTA3!0.22!3.15!MTA3;;chr20:25677443..25677464,-!p2@ZNF337!0.22!2.70!ZNF337;;chr18:53257001..53257015,-!p5@TCF4!0.22!1.80!TCF4;;chr17:46688334..46688385,-!p1@HOXB7!0.22!1.35!HOXB7;;chr2:145274981..145274994,-!p9@ZEB2!0.22!1.35!ZEB2;;chr2:178128552..178128574,-!p7@NFE2L2!0.22!1.35!NFE2L2;;chr19:58987786..58987805,+!p3@ZNF446!0.22!1.35!ZNF446;;chr1:156470494..156470505,-!p3@MEF2D!0.22!1.35!MEF2D;;chr1:61547811..61547837,+!p7@NFIA!0.22!1.35!NFIA;;chr19:44124019..44124030,-!p2@ZNF428!0.22!0.90!ZNF428;;chr19:37329598..37329605,-!p4@ZNF790!0.22!0.90!ZNF790;;chr6:157098993..157099006,+!p12@ARID1B!0.22!0.90!ARID1B;;chr6:157099016..157099027,+!p13@ARID1B!0.22!0.90!ARID1B;;chr8:146024397..146024416,+!p2@ZNF517!0.22!0.90!ZNF517;;chr22:41735880..41735903,+!p5@ZC3H7B!0.22!0.90!ZC3H7B;;chr19:58331088..58331106,+!p1@ZNF587!0.21!20.24!ZNF587;;chr20:306489..306564,+!p1@SOX12!0.21!15.29!SOX12;;chr12:108154891..108154923,-!p1@PRDM4!0.21!12.59!PRDM4;;chr5:172483347..172483407,+!p1@C5orf41!0.21!10.35!CREBRF;;chr8:144329092..144329140,+!p1@ZFP41!0.21!9.90!ZFP41;;chr2:70142189..70142223,+!p2@MXD1!0.21!9.90!MXD1;;chr3:141868357..141868393,-!p3@TFDP2!0.21!9.00!TFDP2;;chr19:18392236..18392248,-!p2@JUND!0.21!9.00!JUND;;chr4:140005443..140005527,-!p2@ELF2!0.21!8.10!ELF2;;chr7:14029283..14029311,-!p1@ETV1!0.21!7.20!ETV1;;chr10:35415882..35415941,+!p4@CREM!0.21!5.85!CREM;;chr3:37217736..37217753,-!p2@LRRFIP2!0.21!5.40!LRRFIP2;;chr19:44556158..44556206,+!p1@ZNF223!0.21!4.95!ZNF223;;chr19:44576296..44576343,+!p2@ZNF284!0.21!4.95!ZNF284;;chr19:37960240..37960299,+!p1@ZNF570!0.21!4.50!ZNF570;;chr2:208030488..208030551,-!p3@KLF7!0.21!4.50!KLF7;;chr19:45252008..45252024,+!p2@BCL3!0.21!4.05!BCL3;;chr19:23870007..23870022,-!p2@ZNF675!0.21!4.05!ZNF675;;chr12:6798056..6798102,-!p3@ZNF384!0.21!3.60!ZNF384;;chr18:3451646..3451691,+!p3@TGIF1!0.21!3.15!TGIF1;;chr19:46272106..46272115,-!p3@SIX5!0.21!3.15!SIX5;;chr7:42276787..42276815,-!p1@GLI3!0.21!3.15!GLI3;;chr7:6676986..6677005,+!p2@ENST00000427912!0.21!3.15!ZNF316;;chr7:137563945..137564001,-!p6@CREB3L2!0.21!2.70!CREB3L2;;chr10:38146994..38147039,-!p2@ZNF248!0.21!2.70!ZNF248;;chr12:133613937..133613994,+!p2@ZNF84!0.21!2.70!ZNF84;;chr19:52408285..52408310,-!p3@ZNF649!0.21!2.70!ZNF649;;chr19:58951496..58951539,-!p1@ZNF132!0.21!2.70!ZNF132;;chr17:41322332..41322351,-!p4@BRCA1!0.21!2.70!BRCA1;;chr4:95128841..95128865,+!p4@SMARCAD1!0.21!2.25!SMARCAD1;;chr5:150284532..150284549,-!p1@ZNF300!0.21!2.25!ZNF300;;chr6:26659967..26659982,-!p1@ZNF322P1,p1@ZNF322!0.21!2.25!ZNF322;;chr7:21467802..21467840,+!p3@SP4!0.21!2.25!SP4;;chr19:44037546..44037594,+!p1@ZNF575!0.21!2.25!ZNF575;;chr20:31350184..31350200,+!p1@DNMT3B!0.21!2.25!DNMT3B;;chr19:56988677..56988729,-!p1@ZNF667!0.21!1.80!ZNF667;;chr18:19749517..19749531,+!p3@GATA6!0.21!1.80!GATA6;;chr3:107241993..107242023,+!p4@BBX!0.21!1.80!BBX;;chr4:87857433..87857472,+!p9@AFF1!0.21!1.80!AFF1;;chr2:166326200..166326216,+!p1@CSRNP3!0.21!1.35!CSRNP3;;chr4:26322373..26322393,+!p4@RBPJ!0.21!1.35!RBPJ;;chr19:58666399..58666438,-!p3@ZNF329!0.21!1.35!ZNF329;;chr6:28234822..28234836,+!p1@ZNF187!0.21!1.35!ZNF187;;chr12:56401175..56401225,+!p3@IKZF4!0.21!1.35!IKZF4;;chr10:35416125..35416138,+!p10@CREM!0.21!0.90!CREM;;chr12:133614119..133614136,+!p5@ZNF84!0.21!0.90!ZNF84;;chr4:81104958..81104981,+!p5@PRDM8!0.21!0.90!PRDM8;;chr5:72743793..72743855,-!p4@FOXD1!0.21!0.90!FOXD1;;chr6:28109703..28109714,+!p3@ZNF192!0.21!0.90!ZNF192;;chr7:99156011..99156036,+!p7@ZNF655!0.21!0.90!ZNF655;;chr1:59249707..59249727,-!p1@JUN!0.20!60.72!JUN;;chr20:47894569..47894799,-!p1@ZNFX1!0.20!37.78!ZNFX1;;chr9:35732592..35732640,+!p1@CREB3!0.20!18.44!CREB3;;chr1:43312258..43312310,+!p1@ZNF691!0.20!13.49!ZNF691;;chr1:246729483..246729538,-!p2@TFB2M!0.20!13.04!TFB2M;;chr20:23342783..23342857,+!p1@GZF1!0.20!12.59!GZF1;;chr19:42724436..42724507,+!p1@ZNF526!0.20!11.25!ZNF526;;chr19:1592828..1592910,-!p2@MBD3!0.20!10.80!MBD3;;chr1:156470515..156470542,-!p2@MEF2D!0.20!6.75!MEF2D;;chr19:59084647..59084721,-!p1@MZF1!0.20!6.30!MZF1;;chr2:174830564..174830605,-!p3@SP3!0.20!6.30!SP3;;chr11:65687362..65687436,+!p3@DRAP1!0.20!5.85!DRAP1;;chr3:150126416..150126437,+!p3@TSC22D2!0.20!4.50!TSC22D2;;chr7:99156145..99156207,+!p5@ZNF655!0.2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chr2:191878812..191878823,-!p2@STAT1!0.18!0.90!STAT1;;chr2:61108808..61108821,+!p3@REL!0.18!0.90!REL;;chr4:146403912..146403972,+!p5@SMAD1!0.18!0.90!SMAD1;;chr10:21822984..21823023,+!p5@MLLT10!0.18!0.90!MLLT10;;chr10:21962268..21962272,+!p6@MLLT10!0.18!0.90!MLLT10;;chr11:707063..707088,-!p4@DEAF1!0.18!0.90!DEAF1;;chr12:80083544..80083558,-!p13@PAWR!0.18!0.90!PAWR;;chrX:76938351..76938379,-!p7@ATRX!0.18!0.90!ATRX;;chr6:43139153..43139232,+!p1@SRF!0.17!12.14!SRF;;chr19:45908292..45908374,-!p1@PPP1R13L!0.17!11.25!PPP1R13L;;chr11:118992269..118992334,+!p1@HINFP!0.17!10.80!HINFP;;chr19:58281014..58281074,+!p1@ZNF586!0.17!10.35!ZNF586;;chr17:17740330..17740349,-!p3@SREBF1!0.17!8.10!SREBF1;;chr14:74226747..74226779,-!p3@C14orf43!0.17!6.75!C14orf43;;chr20:32319784..32319813,+!p1@ZNF341!0.17!5.85!ZNF341;;chr16:3285144..3285191,-!p1@ZNF200!0.17!5.85!ZNF200;;chr6:7108569..7108683,+!p3@RREB1!0.17!4.50!RREB1;;chr19:52074502..52074587,+!p1@ZNF175!0.17!4.05!ZNF175;;chr21:36421535..36421610,-!p2@RUNX1!0.17!4.05!RUNX1;;chr3:114866084..114866118,-!p2@ZBTB20!0.17!4.05!ZBTB20;;chr17:41322208..41322250,-!p3@BRCA1!0.17!3.15!BRCA1;;chr10:35416142..35416169,+!p3@CREM!0.17!2.70!CREM;;chr1:161736125..161736136,+!p5@ATF6!0.17!2.70!ATF6;;chr6:126240380..126240430,+!p2@NCOA7!0.17!2.70!NCOA7;;chr9:109625401..109625458,+!p1@ZNF462!0.17!2.70!ZNF462;;chr11:47235980..47236028,+!p3@DDB2!0.17!2.25!DDB2;;chr12:133707172..133707202,+!p2@ZNF10!0.17!2.25!ZNF10;;chr19:35455110..35455149,-!p1@ZNF792!0.17!1.80!ZNF792;;chr22:46546494..46546525,+!p2@PPARA!0.17!1.80!PPARA;;chr19:36980756..36980795,-!p3@ZNF566!0.17!1.35!ZNF566;;chr11:130184644..130184662,-!p5@ZBTB44!0.17!1.35!ZBTB44;;chr12:51611815..51611855,-!p1@POU6F1!0.17!1.35!POU6F1;;chr6:21594845..21594908,+!p6@SOX4!0.17!1.35!SOX4;;chr7:137564372..137564394,-!p7@CREB3L2!0.17!1.35!CREB3L2;;chr7:99613195..99613206,+!p4@ZKSCAN1!0.17!1.35!ZKSCAN1;;chr19:44331461..44331482,+!p3@ZNF283!0.17!1.35!ZNF283;;chr19:44598560..44598576,+!p3@ZNF224!0.17!1.35!ZNF224;;chr19:52531585..52531596,-!p2@ZNF614!0.17!0.90!ZNF614;;chr19:52552009..52552023,-!p2@ZNF432!0.17!0.90!ZNF432;;chr20:42136308..42136358,+!p2@L3MBTL1!0.17!0.90!L3MBTL;;chr15:96881221..96881240,+!p19@NR2F2!0.17!0.90!NR2F2;;chr18:56530812..56530837,+!p10@ZNF532!0.17!0.90!ZNF532;;chr19:24216201..24216212,+!p4@ZNF254!0.17!0.90!ZNF254;;chr19:35168547..35168564,+!p3@ZNF302!0.17!0.90!ZNF302;;chr3:37216069..37216075,-!p4@LRRFIP2!0.17!0.90!LRRFIP2;;chr4:87928085..87928097,+!p17@AFF1!0.17!0.90!AFF1;;chr5:142783365..142783379,-!p10@NR3C1!0.17!0.90!NR3C1;;chr6:43139126..43139137,+!p6@SRF!0.17!0.90!SRF;;chr22:29196511..29196541,-!p1@XBP1!0.16!145.29!XBP1;;chr14:65569186..65569243,-!p1@MAX!0.16!77.37!MAX;;chr19:50879705..50879775,+!p1@NR1H2!0.16!61.62!NR1H2;;chr16:31724552..31724617,+!p1@ZNF720!0.16!17.54!ZNF720;;chr7:139762641..139762768,-!p1@PARP12!0.16!17.09!PARP12;;chr9:129567282..129567353,+!p1@ZBTB43!0.16!16.64!ZBTB43;;chr4:95128748..95128794,+!p1@SMARCAD1!0.16!15.74!SMARCAD1;;chr11:615942..615957,-!p1@IRF7!0.16!11.69!IRF7;;chr9:130186653..130186734,+!p1@ZNF79!0.16!9.00!ZNF79;;chr20:3388238..3388323,-!p1@C20orf194!0.16!8.55!C20orf194;;chr4:146402997..146403020,+!p1@SMAD1!0.16!8.55!SMAD1;;chr10:104154246..104154347,+!p3@NFKB2!0.16!7.20!NFKB2;;chr19:58361185..58361235,+!p2@ZNF587!0.16!6.30!ZNF587;;chr19:35264089..35264146,-!p1@ZNF599!0.16!5.85!ZNF599;;chr17:2304365..2304388,-!p2@MNT!0.16!5.40!MNT;;chr12:57504975..57505019,-!p2@STAT6!0.16!4.50!STAT6;;chr3:44666551..44666577,+!p2@ZNF197!0.16!4.05!ZNF197;;chr3:71179746..71179783,-!p7@FOXP1!0.16!3.60!FOXP1;; | |expression_enrichment_score=chr17:46132044..46132080,+!p4@NFE2L1!1.64!42.28!NFE2L1;;chr1:170632285..170632309,+!p1@PRRX1!1.54!37.78!PRRX1;;chr19:46801639..46801699,+!p1@HIF3A!1.54!33.74!HIF3A;;chr1:170632137..170632172,+!p10@PRRX1!1.52!32.39!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!1.46!72.87!HMGA2;;chr1:170632115..170632136,+!p9@PRRX1!1.45!27.44!PRRX1;;chr19:42636586..42636607,-!p1@POU2F2!1.41!67.47!POU2F2;;chr12:66218598..66218645,+!p2@HMGA2!1.38!103.90!HMGA2;;chr1:170632051..170632081,+!p16@PRRX1!1.30!18.89!PRRX1;;chr6:134210243..134210257,+!p1@TCF21!1.30!18.89!TCF21;;chr8:72756063..72756125,-!p1@MSC!1.26!34.19!MSC;;chr8:72756267..72756296,-!p4@MSC!1.22!22.94!MSC;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.22!15.74!HOXC5;;chr8:49833948..49833973,-!p2@SNAI2!1.20!93.11!SNAI2;;chr9:4300050..4300118,-!p1@GLIS3!1.13!81.86!GLIS3;;chr1:170632439..170632465,+!p11@PRRX1!1.13!12.59!PRRX1;;chr1:170632028..170632043,+!p20@PRRX1!1.12!12.14!PRRX1;;chr12:66218836..66218888,+!p1@HMGA2!1.10!109.30!HMGA2;;chr8:72756637..72756664,-!p3@MSC!1.10!13.04!MSC;;chr17:46126136..46126152,+!p1@NFE2L1!1.09!582.05!NFE2L1;;chr8:72756213..72756243,-!p5@MSC!1.08!14.39!MSC;;chr8:72756667..72756736,-!p2@MSC!1.05!16.19!MSC;;chr12:66218212..66218244,+!p5@HMGA2!1.03!14.39!HMGA2;;chr6:45296048..45296082,+!p1@RUNX2!1.03!11.25!RUNX2;;chr1:158979872..158979898,+!p3@IFI16!1.02!29.69!IFI16;;chr8:49833978..49833996,-!p1@SNAI2!1.00!186.67!SNAI2;;chr8:55370487..55370503,+!p1@SOX17!1.00!9.00!SOX17;;chr1:37940170..37940190,+!p1@ZC3H12A!0.99!110.20!ZC3H12A;;chr1:170632959..170632987,+!p4@PRRX1!0.98!9.45!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.98!8.55!PRRX1;;chr12:66218183..66218209,+!p4@HMGA2!0.96!15.74!HMGA2;;chr1:170633348..170633399,+!p2@PRRX1!0.96!11.25!PRRX1;;chr10:31288398..31288455,-!p2@ZNF438!0.96!9.45!ZNF438;;chr15:83953397..83953425,-!p1@BNC1!0.96!9.45!BNC1;;chr2:176994408..176994492,+!p1@HOXD8!0.94!7.65!HOXD8;;chr7:26191809..26191890,+!p1@NFE2L3!0.93!38.23!NFE2L3;;chr3:101546827..101546847,+!p2@NFKBIZ!0.93!10.80!NFKBIZ;;chr2:145275162..145275202,-!p2@ZEB2!0.92!44.98!ZEB2;;chr2:239756671..239756732,+!p1@TWIST2!0.92!24.29!TWIST2;;chr8:11561684..11561751,+!p1@GATA4!0.91!7.20!GATA4;;chr1:170632477..170632506,+!p6@PRRX1!0.91!7.20!PRRX1;;chr12:77459306..77459365,-!p1@E2F7!0.90!89.96!E2F7;;chr3:141087393..141087426,+!p3@ZBTB38!0.89!27.89!ZBTB38;;chr12:66218378..66218401,+!p6@HMGA2!0.89!10.80!HMGA2;;chr12:66218420..66218439,+!p12@HMGA2!0.89!6.75!HMGA2;;chr8:72755987..72756002,-!p7@MSC!0.89!6.75!MSC;;chr22:38598086..38598105,+!p1@MAFF!0.88!74.22!MAFF;;chr12:66218443..66218461,+!p8@HMGA2!0.88!8.55!HMGA2;;chr12:57914286..57914304,-!p1@DDIT3!0.86!239.75!DDIT3;;chr2:66662281..66662308,+!p1@MEIS1!0.86!22.94!MEIS1;;chr2:102091566..102091581,-!p1@RFX8!0.86!6.30!RFX8;;chr12:66218904..66218913,+!p11@HMGA2!0.86!6.30!HMGA2;;chr17:46622070..46622109,-!p1@HOXB2!0.83!13.49!HOXB2;;chr6:34204921..34204939,+!p3@HMGA1!0.82!180.37!HMGA1;;chr9:4299979..4299996,-!p3@GLIS3!0.82!9.45!GLIS3;;chr21:30671690..30671762,+!p2@BACH1!0.81!19.79!BACH1;;chr17:41622765..41622821,-!p2@ETV4!0.81!8.55!ETV4;;chr17:41622925..41622976,-!p3@ETV4!0.81!8.55!ETV4;;chr12:66218003..66218018,+!p9@HMGA2!0.81!6.75!HMGA2;;chr2:101591314..101591333,+!p2@NPAS2!0.81!6.30!NPAS2;;chr12:66218469..66218477,+!p16@HMGA2!0.81!5.40!HMGA2;;chr13:45010939..45011033,-!p1@TSC22D1!0.80!383.68!TSC22D1;;chr2:185463247..185463263,+!p1@ZNF804A!0.80!9.90!ZNF804A;;chr2:239756739..239756755,+!p2@TWIST2!0.80!9.45!TWIST2;;chr3:101568349..101568365,+!p1@NFKBIZ!0.78!290.12!NFKBIZ;;chr18:3450293..3450304,+!p4@TGIF1!0.78!13.04!TGIF1;;chr2:28618532..28618610,+!p4@FOSL2!0.78!9.00!FOSL2;;chr2:66662249..66662267,+!p2@MEIS1!0.77!20.24!MEIS1;;chr8:72756380..72756427,-!p8@MSC!0.77!4.95!MSC;;chr12:66218923..66218934,+!p14@HMGA2!0.77!4.95!HMGA2;;chr3:141105705..141105770,+!p4@ZBTB38!0.76!5.85!ZBTB38;;chr8:72756023..72756055,-!p6@MSC!0.75!5.85!MSC;;chr15:42749722..42749739,-!p2@ZFP106!0.74!8.55!ZFP106;;chr3:141121847..141121868,+!p5@ZBTB38!0.74!7.20!ZBTB38;;chr20:48807648..48807671,+!p9@CEBPB!0.74!6.75!CEBPB;;chr1:170632723..170632739,+!p8@PRRX1!0.74!4.50!PRRX1;;chr2:102091144..102091183,-!p2@RFX8!0.74!4.50!RFX8;;chr4:174451370..174451387,-!p1@HAND2!0.74!4.50!HAND2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.74!4.50!HOXC5;;chr8:116681409..116681431,-!p2@TRPS1!0.73!13.04!TRPS1;;chr17:46621937..46621966,-!p2@HOXB2!0.73!13.04!HOXB2;;chr12:66218573..66218596,+!p7@HMGA2!0.73!6.75!HMGA2;;chr5:131826457..131826514,-!p1@IRF1!0.72!186.67!IRF1;;chr2:101436564..101436647,+!p1@NPAS2!0.72!98.51!NPAS2;;chr2:200323414..200323455,-!p1@SATB2!0.72!9.90!SATB2;;chr1:170633262..170633285,+!p3@PRRX1!0.72!4.95!PRRX1;;chr1:221053049..221053075,+!p3@HLX!0.71!7.65!HLX;;chr2:200322654..200322707,-!p2@SATB2!0.71!6.30!SATB2;;chr12:24715376..24715432,-!p1@SOX5!0.71!5.40!SOX5;;chr12:26277956..26277980,-!p1@BHLHE41!0.70!16.19!BHLHE41;;chr8:116681150..116681164,-!p5@TRPS1!0.70!8.55!TRPS1;;chr20:50721803..50721857,-!p2@ZFP64!0.70!6.75!ZFP64;;chr4:174450089..174450153,-!p2@HAND2!0.70!4.05!HAND2;;chr1:158979851..158979865,+!p5@IFI16!0.69!9.45!IFI16;;chr4:87857474..87857489,+!p7@AFF1!0.69!7.20!AFF1;;chr17:46622114..46622138,-!p4@HOXB2!0.69!6.30!HOXB2;;chr17:46622440..46622477,-!p5@HOXB2!0.69!4.50!HOXB2;;chr12:80085255..80085284,-!p9@PAWR!0.68!5.85!PAWR;;chr17:46622205..46622218,-!p3@HOXB2!0.68!4.50!HOXB2;;chr20:48807351..48807384,+!p1@CEBPB!0.67!440.81!CEBPB;;chr18:3450161..3450183,+!p1@TGIF1!0.67!145.29!TGIF1;;chr8:116681123..116681143,-!p4@TRPS1!0.67!7.65!TRPS1;;chr9:4300016..4300039,-!p2@GLIS3!0.67!6.75!GLIS3;;chr1:158979792..158979814,+!p2@IFI16!0.66!39.58!IFI16;;chr3:141121369..141121392,+!p14@ZBTB38!0.66!4.50!ZBTB38;;chr8:116681194..116681214,-!p1@TRPS1!0.65!37.33!TRPS1;;chr11:46299199..46299233,+!p1@CREB3L1!0.65!20.69!CREB3L1;;chr14:24837368..24837401,+!p1@NFATC4!0.65!9.00!NFATC4;;chr2:46524537..46524553,+!p1@EPAS1!0.64!394.93!EPAS1;;chr20:48807456..48807475,+!p3@CEBPB!0.64!7.20!CEBPB;;chr21:36260343..36260402,-!p6@RUNX1!0.64!5.85!RUNX1;;chr18:3450334..3450341,+!p15@TGIF1!0.64!4.50!TGIF1;;chr14:62162258..62162269,+!p2@HIF1A!0.63!37.33!HIF1A;;chr6:34205372..34205412,+!p5@HMGA1!0.63!19.34!HMGA1;;chr12:115121962..115121987,-!p1@TBX3!0.62!31.49!TBX3;;chr9:4299959..4299974,-!p4@GLIS3!0.62!5.40!GLIS3;;chr12:26277817..26277863,-!p2@BHLHE41!0.62!4.50!BHLHE41;;chr12:54447599..54447630,+!p3@HOXC4!0.62!4.05!HOXC4;;chr20:48807548..48807572,+!p14@CEBPB!0.62!4.05!CEBPB;;chr1:170632647..170632659,+!p17@PRRX1!0.62!3.15!PRRX1;;chr14:64761083..64761101,-!p1@ESR2!0.62!3.15!ESR2;;chr6:152011654..152011682,+!p1@ESR1!0.62!3.15!ESR1;;chr8:72756194..72756208,-!p9@MSC!0.62!3.15!MSC;;chr22:21771656..21771662,+!p1@HIC2!0.62!3.15!HIC2;;chr2:102091478..102091490,-!p3@RFX8!0.62!3.15!RFX8;;chr2:113999360..113999386,-!p4@PAX8!0.62!3.15!PAX8;;chr2:66662510..66662521,+!p6@MEIS1!0.62!3.15!MEIS1;;chr16:86612320..86612394,+!p1@FOXL1!0.62!3.15!FOXL1;;chr4:87857491..87857519,+!p10@AFF1!0.61!4.50!AFF1;;chr11:65667884..65667895,-!p2@FOSL1!0.60!13.49!FOSL1;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.60!5.40!MEIS3P1;;chr19:31840130..31840160,-!p2@TSHZ3!0.60!4.95!TSHZ3;;chr7:106809470..106809481,+!p2@HBP1!0.60!4.50!HBP1;;chr20:50179368..50179392,-!p2@NFATC2!0.60!4.05!NFATC2;;chr12:56753869..56753930,-!p1@STAT2!0.59!157.88!STAT2;;chr11:65430554..65430579,-!p3@RELA!0.59!8.55!RELA;;chr14:35872453..35872485,-!p2@NFKBIA!0.59!8.10!NFKBIA;;chr12:48298765..48298783,-!p2@VDR!0.59!6.75!VDR;;chr17:20492136..20492165,+!p1@MEIS3P2!0.59!4.95!MEIS3P2;;chr7:44143925..44143970,+!p1@AEBP1!0.58!77.82!AEBP1;;chr19:45504688..45504782,+!p1@RELB!0.58!20.69!RELB;;chr7:19157043..19157088,-!p2@TWIST1!0.58!8.10!TWIST1;;chr8:23540441..23540466,-!p1@NKX3-1!0.58!6.30!NKX3-1;;chr18:3449586..3449617,+!p8@TGIF1!0.58!4.95!TGIF1;;chr8:128747757..128747800,+!p7@MYC!0.58!4.05!MYC;;chr2:145275228..145275241,-!p11@ZEB2!0.58!3.60!ZEB2;;chr10:63809106..63809127,+!p1@ARID5B!0.57!45.88!ARID5B;;chr22:38597987..38598021,+!p2@MAFF!0.57!20.24!MAFF;;chr20:42543441..42543497,+!p1@TOX2!0.57!14.84!TOX2;;chr18:22932080..22932170,-!p1@ZNF521!0.57!13.94!ZNF521;;chr16:54320646..54320672,-!p2@IRX3!0.57!4.50!IRX3;;chr1:158985493..158985535,+!p4@IFI16!0.57!4.50!IFI16;;chr16:86544113..86544145,+!p1@FOXF1!0.57!3.60!FOXF1;;chr2:66662895..66662907,+!p3@MEIS1!0.57!3.60!MEIS1;;chr9:4300004..4300015,-!p6@GLIS3!0.57!3.15!GLIS3;;chr1:170632108..170632114,+!p29@PRRX1!0.57!2.70!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.57!2.70!PRRX1;;chr7:150102756..150102772,+!p5@ZNF775!0.57!2.70!ZNF775;;chr10:64018918..64018936,+!p2@ZNF365!0.57!2.70!ZNF365;;chr12:10870927..10870966,-!p5@CSDA!0.57!2.70!CSDA;;chr2:66662396..66662407,+!p4@MEIS1!0.57!2.70!MEIS1;;chr3:141121871..141121885,+!p13@ZBTB38!0.57!2.70!ZBTB38;;chr17:41622731..41622764,-!p5@ETV4!0.57!2.70!ETV4;;chr17:46682321..46682362,-!p1@HOXB6!0.57!2.70!HOXB6;;chr3:141087339..141087387,+!p2@ZBTB38!0.56!33.29!ZBTB38;;chr14:35872926..35872951,-!p4@NFKBIA!0.56!4.05!NFKBIA;;chr7:44143997..44144008,+!p3@AEBP1!0.56!3.60!AEBP1;;chr17:46675420..46675465,-!p3@HOXB6!0.56!3.15!HOXB6;;chr20:48807875..48807982,+!p2@CEBPB!0.55!70.17!CEBPB;;chr3:114343768..114343822,-!p1@ZBTB20!0.55!13.49!ZBTB20;;chr14:35872962..35873025,-!p3@NFKBIA!0.55!7.65!NFKBIA;;chr11:61520075..61520136,+!p1@C11orf9!0.55!6.30!C11orf9;;chr14:62203595..62203676,+!p4@HIF1A!0.55!5.40!HIF1A;;chr20:2673383..2673441,+!p1@EBF4!0.55!4.50!EBF4;;chr6:34204672..34204692,+!p1@HMGA1!0.54!353.55!HMGA1;;chr8:106330656..106330684,+!p1@ZFPM2!0.54!7.65!ZFPM2;;chr10:63809134..63809145,+!p6@ARID5B!0.54!6.75!ARID5B;;chr17:41623009..41623053,-!p4@ETV4!0.54!4.50!ETV4;;chr20:48807779..48807802,+!p10@CEBPB!0.54!4.50!CEBPB;;chr21:36260295..36260310,-!p3@RUNX1!0.54!4.50!RUNX1;;chr12:72056800..72056834,+!p1@THAP2!0.54!3.60!THAP2;;chr14:62162285..62162296,+!p3@HIF1A!0.53!15.74!HIF1A;;chr19:59084872..59084920,-!p2@MZF1!0.53!7.65!MZF1;;chr18:3449695..3449712,+!p9@TGIF1!0.53!4.05!TGIF1;;chr17:46127997..46128015,+!p5@NFE2L1!0.53!3.60!NFE2L1;;chr11:65667846..65667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CREB3L1!0.23!0.90!CREB3L1;;chr13:73636516..73636532,+!p3@KLF5!0.23!0.90!KLF5;;chr9:128509857..128509872,+!p6@PBX3!0.23!0.90!PBX3;;chr8:80680024..80680046,-!p2@HEY1!0.23!0.90!HEY1;;chr16:31454084..31454115,-!p1@ZNF843!0.23!0.90!ZNF843;;chr19:12175596..12175605,+!p4@ZNF844!0.23!0.90!ZNF844;;chr2:70314849..70314860,+!p3@PCBP1!0.22!21.59!PCBP1;;chr12:96588143..96588185,+!p1@ELK3!0.22!17.54!ELK3;;chr6:7107939..7107993,+!p1@RREB1!0.22!17.09!RREB1;;chr19:57999101..57999158,+!p1@ZNF419!0.22!9.45!ZNF419;;chr19:44507091..44507163,+!p1@ZNF230!0.22!5.85!ZNF230;;chr21:47063625..47063658,+!p1@PCBP3!0.22!5.85!PCBP3;;chr16:73092898..73092931,-!p1@ZFHX3!0.22!4.95!ZFHX3;;chr1:67396044..67396071,+!p3@MIER1!0.22!4.50!MIER1;;chr16:89787402..89787430,+!p2@ZNF276!0.22!4.05!ZNF276;;chr2:42795651..42795676,+!p3@MTA3!0.22!3.15!MTA3;;chr20:25677443..25677464,-!p2@ZNF337!0.22!2.70!ZNF337;;chr18:53257001..53257015,-!p5@TCF4!0.22!1.80!TCF4;;chr17:46688334..46688385,-!p1@HOXB7!0.22!1.35!HOXB7;;chr2:145274981..145274994,-!p9@ZEB2!0.22!1.35!ZEB2;;chr2:178128552..178128574,-!p7@NFE2L2!0.22!1.35!NFE2L2;;chr19:58987786..58987805,+!p3@ZNF446!0.22!1.35!ZNF446;;chr1:156470494..156470505,-!p3@MEF2D!0.22!1.35!MEF2D;;chr1:61547811..61547837,+!p7@NFIA!0.22!1.35!NFIA;;chr19:44124019..44124030,-!p2@ZNF428!0.22!0.90!ZNF428;;chr19:37329598..37329605,-!p4@ZNF790!0.22!0.90!ZNF790;;chr6:157098993..157099006,+!p12@ARID1B!0.22!0.90!ARID1B;;chr6:157099016..157099027,+!p13@ARID1B!0.22!0.90!ARID1B;;chr8:146024397..146024416,+!p2@ZNF517!0.22!0.90!ZNF517;;chr22:41735880..41735903,+!p5@ZC3H7B!0.22!0.90!ZC3H7B;;chr19:58331088..58331106,+!p1@ZNF587!0.21!20.24!ZNF587;;chr20:306489..306564,+!p1@SOX12!0.21!15.29!SOX12;;chr12:108154891..108154923,-!p1@PRDM4!0.21!12.59!PRDM4;;chr5:172483347..172483407,+!p1@C5orf41!0.21!10.35!CREBRF;;chr8:144329092..144329140,+!p1@ZFP41!0.21!9.90!ZFP41;;chr2:70142189..70142223,+!p2@MXD1!0.21!9.90!MXD1;;chr3:141868357..141868393,-!p3@TFDP2!0.21!9.00!TFDP2;;chr19:18392236..18392248,-!p2@JUND!0.21!9.00!JUND;;chr4:140005443..140005527,-!p2@ELF2!0.21!8.10!ELF2;;chr7:14029283..14029311,-!p1@ETV1!0.21!7.20!ETV1;;chr10:35415882..35415941,+!p4@CREM!0.21!5.85!CREM;;chr3:37217736..37217753,-!p2@LRRFIP2!0.21!5.40!LRRFIP2;;chr19:44556158..44556206,+!p1@ZNF223!0.21!4.95!ZNF223;;chr19:44576296..44576343,+!p2@ZNF284!0.21!4.95!ZNF284;;chr19:37960240..37960299,+!p1@ZNF570!0.21!4.50!ZNF570;;chr2:208030488..208030551,-!p3@KLF7!0.21!4.50!KLF7;;chr19:45252008..45252024,+!p2@BCL3!0.21!4.05!BCL3;;chr19:23870007..23870022,-!p2@ZNF675!0.21!4.05!ZNF675;;chr12:6798056..6798102,-!p3@ZNF384!0.21!3.60!ZNF384;;chr18:3451646..3451691,+!p3@TGIF1!0.21!3.15!TGIF1;;chr19:46272106..46272115,-!p3@SIX5!0.21!3.15!SIX5;;chr7:42276787..42276815,-!p1@GLI3!0.21!3.15!GLI3;;chr7:6676986..6677005,+!p2@ENST00000427912!0.21!3.15!ZNF316;;chr7:137563945..137564001,-!p6@CREB3L2!0.21!2.70!CREB3L2;;chr10:38146994..38147039,-!p2@ZNF248!0.21!2.70!ZNF248;;chr12:133613937..133613994,+!p2@ZNF84!0.21!2.70!ZNF84;;chr19:52408285..52408310,-!p3@ZNF649!0.21!2.70!ZNF649;;chr19:58951496..58951539,-!p1@ZNF132!0.21!2.70!ZNF132;;chr17:41322332..41322351,-!p4@BRCA1!0.21!2.70!BRCA1;;chr4:95128841..95128865,+!p4@SMARCAD1!0.21!2.25!SMARCAD1;;chr5:150284532..150284549,-!p1@ZNF300!0.21!2.25!ZNF300;;chr6:26659967..26659982,-!p1@ZNF322P1,p1@ZNF322!0.21!2.25!ZNF322;;chr7:21467802..21467840,+!p3@SP4!0.21!2.25!SP4;;chr19:44037546..44037594,+!p1@ZNF575!0.21!2.25!ZNF575;;chr20:31350184..31350200,+!p1@DNMT3B!0.21!2.25!DNMT3B;;chr19:56988677..56988729,-!p1@ZNF667!0.21!1.80!ZNF667;;chr18:19749517..19749531,+!p3@GATA6!0.21!1.80!GATA6;;chr3:107241993..107242023,+!p4@BBX!0.21!1.80!BBX;;chr4:87857433..87857472,+!p9@AFF1!0.21!1.80!AFF1;;chr2:166326200..166326216,+!p1@CSRNP3!0.21!1.35!CSRNP3;;chr4:26322373..26322393,+!p4@RBPJ!0.21!1.35!RBPJ;;chr19:58666399..58666438,-!p3@ZNF329!0.21!1.35!ZNF329;;chr6:28234822..28234836,+!p1@ZNF187!0.21!1.35!ZNF187;;chr12:56401175..56401225,+!p3@IKZF4!0.21!1.35!IKZF4;;chr10:35416125..35416138,+!p10@CREM!0.21!0.90!CREM;;chr12:133614119..133614136,+!p5@ZNF84!0.21!0.90!ZNF84;;chr4:81104958..81104981,+!p5@PRDM8!0.21!0.90!PRDM8;;chr5:72743793..72743855,-!p4@FOXD1!0.21!0.90!FOXD1;;chr6:28109703..28109714,+!p3@ZNF192!0.21!0.90!ZNF192;;chr7:99156011..99156036,+!p7@ZNF655!0.21!0.90!ZNF655;;chr1:59249707..59249727,-!p1@JUN!0.20!60.72!JUN;;chr20:47894569..47894799,-!p1@ZNFX1!0.20!37.78!ZNFX1;;chr9:35732592..35732640,+!p1@CREB3!0.20!18.44!CREB3;;chr1:43312258..43312310,+!p1@ZNF691!0.20!13.49!ZNF691;;chr1:246729483..246729538,-!p2@TFB2M!0.20!13.04!TFB2M;;chr20:23342783..23342857,+!p1@GZF1!0.20!12.59!GZF1;;chr19:42724436..42724507,+!p1@ZNF526!0.20!11.25!ZNF526;;chr19:1592828..1592910,-!p2@MBD3!0.20!10.80!MBD3;;chr1:156470515..156470542,-!p2@MEF2D!0.20!6.75!MEF2D;;chr19:59084647..59084721,-!p1@MZF1!0.20!6.30!MZF1;;chr2:174830564..174830605,-!p3@SP3!0.20!6.30!SP3;;chr11:65687362..65687436,+!p3@DRAP1!0.20!5.85!DRAP1;;chr3:150126416..150126437,+!p3@TSC22D2!0.20!4.50!TSC22D2;;chr7:99156145..99156207,+!p5@ZNF655!0.2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| ||
|ffid_belonging_in_development=CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor2.CNhs13092.11833-124G6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor2.CNhs13092.11833-124G6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor2.CNhs13092.11833-124G6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor2.CNhs13092.11833-124G6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor2.CNhs13092.11833-124G6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11833-124G6 | |id=FF:11833-124G6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000273 | ||
|is_obsolete= | |||
|library_id=CNhs13092 | |||
|library_id_phase_based=2:CNhs13092 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11833 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11833 | |||
|name=mesenchymal precursor cell - ovarian cancer left ovary, donor2 | |name=mesenchymal precursor cell - ovarian cancer left ovary, donor2 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13092,LSID1001,release013,COMPLETED | |profile_hcage=CNhs13092,LSID1001,release013,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.080654513839309,0,0,0,0,0.351433761271283,0,0.00383028573322897,0.174419927829709,0,0,0,0,0,0,0,0,0,0,0,0.161309027678618,0,0.00798601733019003,0,0,0,0,0,0.180705687671262,0,0.080654513839309,0.314079271094209,0,0,0,0,0,0,0,0,0,0,0.740207193840762,0,0.0327593359364047,0.18970315132505,0.161309027678618,0,0,0,0,0,0,0.0564394927264745,0,0,0,0,0,0,0,0.350043499630466,0,0,0.273615063081616,0,0,0,0,0,0,0,0,0.161309027678618,0,0,0,0,0,0,0,0,0,0,0,0,0.080654513839309,0,0,0.0349227343655414,0,0,0,-0.0630145102856405,-0.0257180575485123,0.080654513839309,0.278663583939319,0,0,-0.0980353512377064,0.0850407296356405,0,0,0,0,0,0,0.161309027678618,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.161309027678618,0,0,-0.00424206377045783,-0.0989579775429398,0,0,0.111326348491658,0,0,0 | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=37.44685 | |rna_weight_ug=37.44685 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 77: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=NKX3-1:2.37923067716;HIF1A:2.0103672416;ALX1:1.66009434944;ATF6:1.60454422932;TAL1_TCF{3,4,12}:1.50161284737;PAX4:1.31053595838;XBP1:1.25346206361;ONECUT1,2:1.21019855362;RXR{A,B,G}:1.20463867668;bHLH_family:1.18659901435;SREBF1,2:1.18366718257;ZBTB16:1.16336611612;ALX4:1.14239014489;NFIX:1.08410916273;HOX{A4,D4}:1.0542159632;EVI1:1.02462311188;NR6A1:0.93160815563;NFE2L1:0.924950741642;EN1,2:0.893521239991;POU6F1:0.880152666064;HSF1,2:0.859942103132;NFE2L2:0.808007103951;PPARG:0.803219798487;MAFB:0.788865150534;TLX2:0.745224878499;GZF1:0.723659437899;HLF:0.692756437896;HES1:0.64051583139;MYBL2:0.633051683071;NKX2-2,8:0.611953736814;BPTF:0.574240849239;RXRA_VDR{dimer}:0.563300278056;ZNF238:0.560598728094;PAX1,9:0.550702088105;IRF1,2:0.533274951307;LHX3,4:0.522465521986;ZBTB6:0.502592158044;HBP1_HMGB_SSRP1_UBTF:0.457595847403;NFATC1..3:0.450892726035;ELK1,4_GABP{A,B1}:0.43520247354;PRRX1,2:0.432658089945;CDC5L:0.428959155865;MYFfamily:0.414631233225;UFEwm:0.396956942725;PAX2:0.368845191593;TFAP4:0.363265841222;GTF2A1,2:0.361744428746;TLX1..3_NFIC{dimer}:0.357167458416;HMX1:0.35634869728;FOXD3:0.344786159347;PRDM1:0.326542578278;TBX4,5:0.3255735114;NFE2:0.305332142157;TP53:0.297323324983;CEBPA,B_DDIT3:0.287296195487;NFKB1_REL_RELA:0.274339618816;TEAD1:0.270599772027;TBP:0.234032413124;EBF1:0.224082676602;NHLH1,2:0.206591894058;BACH2:0.203044172737;FOS_FOS{B,L1}_JUN{B,D}:0.200720959991;CRX:0.196260423267;ZNF384:0.180145923442;FOXP3:0.179655066337;KLF4:0.175664125882;ESR1:0.173407414277;SMAD1..7,9:0.157047465305;MAZ:0.156145475844;STAT2,4,6:0.150530931857;PITX1..3:0.149997545903;CREB1:0.149988119982;FOXP1:0.138869389488;HOX{A5,B5}:0.130657910531;GLI1..3:0.123463425008;RFX1:0.118466689158;ZNF423:0.105892574769;PATZ1:0.100537398404;STAT5{A,B}:0.0981720080385;RREB1:0.0968542681854;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0827520859216;SOX17:0.0792100776125;MZF1:0.0705328463898;FOSL2:0.0682421581134;NKX2-1,4:0.0614657016522;TEF:0.0518295644222;TFAP2{A,C}:0.0470370512883;SRF:0.0460390676271;GTF2I:0.0445612319071;IKZF1:0.0401571875193;FOX{D1,D2}:0.0287964156184;AIRE:0.0221785733511;TOPORS:0.0205626385332;TFAP2B:0.0196909056996;MED-1{core}:0.0110335597885;RUNX1..3:0.00443910568536;ZIC1..3:0.00315981784663;ATF2:-0.00816689864037;HNF1A:-0.0137375973667;CDX1,2,4:-0.0165743810091;AHR_ARNT_ARNT2:-0.0172647900622;GFI1B:-0.0272289679218;ZFP161:-0.0315320607038;TFCP2:-0.0326081412873;NKX3-2:-0.0859250965491;ZNF143:-0.108154394957;MTE{core}:-0.108553217991;NR3C1:-0.111865167825;PAX8:-0.114216933773;FOXL1:-0.116230772556;SP1:-0.134547622931;SPZ1:-0.13653194669;ELF1,2,4:-0.137255945407;NKX6-1,2:-0.142724904985;NANOG{mouse}:-0.150071810442;TFDP1:-0.151007984441;PBX1:-0.156976236319;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.158534498094;REST:-0.158759890033;MTF1:-0.17942560299;IRF7:-0.18217916629;HIC1:-0.184598260636;ESRRA:-0.190426620531;GCM1,2:-0.196977282348;HMGA1,2:-0.215119675116;HNF4A_NR2F1,2:-0.234916919747;HOXA9_MEIS1:-0.243112179214;DMAP1_NCOR{1,2}_SMARC:-0.249392887565;JUN:-0.262552394567;STAT1,3:-0.267065417568;GATA4:-0.27611560351;SPI1:-0.28252640121;SOX5:-0.300617270389;ATF4:-0.311487792171;NR1H4:-0.31259413966;FOXQ1:-0.31943836506;LEF1_TCF7_TCF7L1,2:-0.320771001125;PAX5:-0.322518840864;NRF1:-0.324521673393;ATF5_CREB3:-0.334124008766;RBPJ:-0.336696407034;ADNP_IRX_SIX_ZHX:-0.382476789137;POU3F1..4:-0.384763234909;PDX1:-0.385759421901;POU2F1..3:-0.390310088854;CUX2:-0.396882128568;PAX3,7:-0.396955881085;YY1:-0.414468847176;MEF2{A,B,C,D}:-0.431600292335;ETS1,2:-0.433709727546;IKZF2:-0.456836183509;XCPE1{core}:-0.480016903072;RFX2..5_RFXANK_RFXAP:-0.497962700845;DBP:-0.506132162862;T:-0.515424499442;RORA:-0.515424524328;ZNF148:-0.517910508227;FOX{F1,F2,J1}:-0.521585459728;EGR1..3:-0.564557383531;AR:-0.584193363888;GATA6:-0.597918734962;FOX{I1,J2}:-0.621675008758;HAND1,2:-0.629131930545;SPIB:-0.642464465893;POU1F1:-0.643745597979;MYOD1:-0.666387309404;NFIL3:-0.682253399703;MYB:-0.695002788918;FOXN1:-0.695269706845;LMO2:-0.701742445984;GFI1:-0.779511044488;ZEB1:-0.806667258381;FOXO1,3,4:-0.825679973857;OCT4_SOX2{dimer}:-0.845703575989;SOX{8,9,10}:-0.88439734861;E2F1..5:-0.931720791571;NANOG:-0.94220123854;TGIF1:-0.975667925221;SOX2:-0.977347970116;SNAI1..3:-0.985653525283;NFY{A,B,C}:-1.00735808149;FOXM1:-1.01473216688;EP300:-1.03747307709;NKX2-3_NKX2-5:-1.06326576971;PAX6:-1.07293115988;BREu{core}:-1.11079124807;HOX{A6,A7,B6,B7}:-1.11204014722;POU5F1:-1.19071004464;FOXA2:-1.29862531619;NR5A1,2:-1.33811585325;ARID5B:-1.38992542914;VSX1,2:-1.56580623193 | |top_motifs=NKX3-1:2.37923067716;HIF1A:2.0103672416;ALX1:1.66009434944;ATF6:1.60454422932;TAL1_TCF{3,4,12}:1.50161284737;PAX4:1.31053595838;XBP1:1.25346206361;ONECUT1,2:1.21019855362;RXR{A,B,G}:1.20463867668;bHLH_family:1.18659901435;SREBF1,2:1.18366718257;ZBTB16:1.16336611612;ALX4:1.14239014489;NFIX:1.08410916273;HOX{A4,D4}:1.0542159632;EVI1:1.02462311188;NR6A1:0.93160815563;NFE2L1:0.924950741642;EN1,2:0.893521239991;POU6F1:0.880152666064;HSF1,2:0.859942103132;NFE2L2:0.808007103951;PPARG:0.803219798487;MAFB:0.788865150534;TLX2:0.745224878499;GZF1:0.723659437899;HLF:0.692756437896;HES1:0.64051583139;MYBL2:0.633051683071;NKX2-2,8:0.611953736814;BPTF:0.574240849239;RXRA_VDR{dimer}:0.563300278056;ZNF238:0.560598728094;PAX1,9:0.550702088105;IRF1,2:0.533274951307;LHX3,4:0.522465521986;ZBTB6:0.502592158044;HBP1_HMGB_SSRP1_UBTF:0.457595847403;NFATC1..3:0.450892726035;ELK1,4_GABP{A,B1}:0.43520247354;PRRX1,2:0.432658089945;CDC5L:0.428959155865;MYFfamily:0.414631233225;UFEwm:0.396956942725;PAX2:0.368845191593;TFAP4:0.363265841222;GTF2A1,2:0.361744428746;TLX1..3_NFIC{dimer}:0.357167458416;HMX1:0.35634869728;FOXD3:0.344786159347;PRDM1:0.326542578278;TBX4,5:0.3255735114;NFE2:0.305332142157;TP53:0.297323324983;CEBPA,B_DDIT3:0.287296195487;NFKB1_REL_RELA:0.274339618816;TEAD1:0.270599772027;TBP:0.234032413124;EBF1:0.224082676602;NHLH1,2:0.206591894058;BACH2:0.203044172737;FOS_FOS{B,L1}_JUN{B,D}:0.200720959991;CRX:0.196260423267;ZNF384:0.180145923442;FOXP3:0.179655066337;KLF4:0.175664125882;ESR1:0.173407414277;SMAD1..7,9:0.157047465305;MAZ:0.156145475844;STAT2,4,6:0.150530931857;PITX1..3:0.149997545903;CREB1:0.149988119982;FOXP1:0.138869389488;HOX{A5,B5}:0.130657910531;GLI1..3:0.123463425008;RFX1:0.118466689158;ZNF423:0.105892574769;PATZ1:0.100537398404;STAT5{A,B}:0.0981720080385;RREB1:0.0968542681854;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0827520859216;SOX17:0.0792100776125;MZF1:0.0705328463898;FOSL2:0.0682421581134;NKX2-1,4:0.0614657016522;TEF:0.0518295644222;TFAP2{A,C}:0.0470370512883;SRF:0.0460390676271;GTF2I:0.0445612319071;IKZF1:0.0401571875193;FOX{D1,D2}:0.0287964156184;AIRE:0.0221785733511;TOPORS:0.0205626385332;TFAP2B:0.0196909056996;MED-1{core}:0.0110335597885;RUNX1..3:0.00443910568536;ZIC1..3:0.00315981784663;ATF2:-0.00816689864037;HNF1A:-0.0137375973667;CDX1,2,4:-0.0165743810091;AHR_ARNT_ARNT2:-0.0172647900622;GFI1B:-0.0272289679218;ZFP161:-0.0315320607038;TFCP2:-0.0326081412873;NKX3-2:-0.0859250965491;ZNF143:-0.108154394957;MTE{core}:-0.108553217991;NR3C1:-0.111865167825;PAX8:-0.114216933773;FOXL1:-0.116230772556;SP1:-0.134547622931;SPZ1:-0.13653194669;ELF1,2,4:-0.137255945407;NKX6-1,2:-0.142724904985;NANOG{mouse}:-0.150071810442;TFDP1:-0.151007984441;PBX1:-0.156976236319;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.158534498094;REST:-0.158759890033;MTF1:-0.17942560299;IRF7:-0.18217916629;HIC1:-0.184598260636;ESRRA:-0.190426620531;GCM1,2:-0.196977282348;HMGA1,2:-0.215119675116;HNF4A_NR2F1,2:-0.234916919747;HOXA9_MEIS1:-0.243112179214;DMAP1_NCOR{1,2}_SMARC:-0.249392887565;JUN:-0.262552394567;STAT1,3:-0.267065417568;GATA4:-0.27611560351;SPI1:-0.28252640121;SOX5:-0.300617270389;ATF4:-0.311487792171;NR1H4:-0.31259413966;FOXQ1:-0.31943836506;LEF1_TCF7_TCF7L1,2:-0.320771001125;PAX5:-0.322518840864;NRF1:-0.324521673393;ATF5_CREB3:-0.334124008766;RBPJ:-0.336696407034;ADNP_IRX_SIX_ZHX:-0.382476789137;POU3F1..4:-0.384763234909;PDX1:-0.385759421901;POU2F1..3:-0.390310088854;CUX2:-0.396882128568;PAX3,7:-0.396955881085;YY1:-0.414468847176;MEF2{A,B,C,D}:-0.431600292335;ETS1,2:-0.433709727546;IKZF2:-0.456836183509;XCPE1{core}:-0.480016903072;RFX2..5_RFXANK_RFXAP:-0.497962700845;DBP:-0.506132162862;T:-0.515424499442;RORA:-0.515424524328;ZNF148:-0.517910508227;FOX{F1,F2,J1}:-0.521585459728;EGR1..3:-0.564557383531;AR:-0.584193363888;GATA6:-0.597918734962;FOX{I1,J2}:-0.621675008758;HAND1,2:-0.629131930545;SPIB:-0.642464465893;POU1F1:-0.643745597979;MYOD1:-0.666387309404;NFIL3:-0.682253399703;MYB:-0.695002788918;FOXN1:-0.695269706845;LMO2:-0.701742445984;GFI1:-0.779511044488;ZEB1:-0.806667258381;FOXO1,3,4:-0.825679973857;OCT4_SOX2{dimer}:-0.845703575989;SOX{8,9,10}:-0.88439734861;E2F1..5:-0.931720791571;NANOG:-0.94220123854;TGIF1:-0.975667925221;SOX2:-0.977347970116;SNAI1..3:-0.985653525283;NFY{A,B,C}:-1.00735808149;FOXM1:-1.01473216688;EP300:-1.03747307709;NKX2-3_NKX2-5:-1.06326576971;PAX6:-1.07293115988;BREu{core}:-1.11079124807;HOX{A6,A7,B6,B7}:-1.11204014722;POU5F1:-1.19071004464;FOXA2:-1.29862531619;NR5A1,2:-1.33811585325;ARID5B:-1.38992542914;VSX1,2:-1.56580623193 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11833-124G6;search_select_hide=table117:FF:11833-124G6 | |||
}} | }} | ||
Latest revision as of 18:22, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer left ovary, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13092 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13092
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13092
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.761 |
| 10 | 10 | 0.0769 |
| 100 | 100 | 0.153 |
| 101 | 101 | 0.446 |
| 102 | 102 | 0.227 |
| 103 | 103 | 0.63 |
| 104 | 104 | 0.528 |
| 105 | 105 | 0.0264 |
| 106 | 106 | 0.0415 |
| 107 | 107 | 0.276 |
| 108 | 108 | 0.452 |
| 109 | 109 | 0.346 |
| 11 | 11 | 0.743 |
| 110 | 110 | 0.552 |
| 111 | 111 | 0.168 |
| 112 | 112 | 0.726 |
| 113 | 113 | 0.502 |
| 114 | 114 | 0.0659 |
| 115 | 115 | 0.758 |
| 116 | 116 | 0.139 |
| 117 | 117 | 0.0594 |
| 118 | 118 | 0.326 |
| 119 | 119 | 0.773 |
| 12 | 12 | 0.752 |
| 120 | 120 | 0.295 |
| 121 | 121 | 0.507 |
| 122 | 122 | 0.0175 |
| 123 | 123 | 0.651 |
| 124 | 124 | 0.0729 |
| 125 | 125 | 0.851 |
| 126 | 126 | 0.697 |
| 127 | 127 | 0.45 |
| 128 | 128 | 0.583 |
| 129 | 129 | 0.988 |
| 13 | 13 | 0.359 |
| 130 | 130 | 0.301 |
| 131 | 131 | 0.224 |
| 132 | 132 | 0.775 |
| 133 | 133 | 0.825 |
| 134 | 134 | 0.964 |
| 135 | 135 | 0.827 |
| 136 | 136 | 0.909 |
| 137 | 137 | 0.805 |
| 138 | 138 | 0.231 |
| 139 | 139 | 0.29 |
| 14 | 14 | 0.333 |
| 140 | 140 | 0.559 |
| 141 | 141 | 0.667 |
| 142 | 142 | 0.361 |
| 143 | 143 | 0.285 |
| 144 | 144 | 0.202 |
| 145 | 145 | 0.174 |
| 146 | 146 | 0.204 |
| 147 | 147 | 0.566 |
| 148 | 148 | 0.525 |
| 149 | 149 | 0.393 |
| 15 | 15 | 0.214 |
| 150 | 150 | 0.146 |
| 151 | 151 | 0.754 |
| 152 | 152 | 0.144 |
| 153 | 153 | 0.648 |
| 154 | 154 | 0.83 |
| 155 | 155 | 0.03 |
| 156 | 156 | 0.13 |
| 157 | 157 | 0.25 |
| 158 | 158 | 0.445 |
| 159 | 159 | 0.786 |
| 16 | 16 | 0.154 |
| 160 | 160 | 0.68 |
| 161 | 161 | 0.22 |
| 162 | 162 | 0.607 |
| 163 | 163 | 0.682 |
| 164 | 164 | 4.71072e-4 |
| 165 | 165 | 0.74 |
| 166 | 166 | 0.22 |
| 167 | 167 | 0.0476 |
| 168 | 168 | 0.2 |
| 169 | 169 | 0.356 |
| 17 | 17 | 0.923 |
| 18 | 18 | 0.0339 |
| 19 | 19 | 0.359 |
| 2 | 2 | 0.89 |
| 20 | 20 | 0.386 |
| 21 | 21 | 0.0858 |
| 22 | 22 | 0.554 |
| 23 | 23 | 0.381 |
| 24 | 24 | 0.995 |
| 25 | 25 | 0.0149 |
| 26 | 26 | 0.519 |
| 27 | 27 | 0.908 |
| 28 | 28 | 0.724 |
| 29 | 29 | 0.103 |
| 3 | 3 | 0.669 |
| 30 | 30 | 0.149 |
| 31 | 31 | 0.792 |
| 32 | 32 | 4.21802e-5 |
| 33 | 33 | 0.968 |
| 34 | 34 | 0.644 |
| 35 | 35 | 0.195 |
| 36 | 36 | 0.441 |
| 37 | 37 | 0.00439 |
| 38 | 38 | 0.257 |
| 39 | 39 | 0.464 |
| 4 | 4 | 0.0659 |
| 40 | 40 | 0.417 |
| 41 | 41 | 0.269 |
| 42 | 42 | 0.138 |
| 43 | 43 | 0.533 |
| 44 | 44 | 0.928 |
| 45 | 45 | 0.747 |
| 46 | 46 | 0.699 |
| 47 | 47 | 0.424 |
| 48 | 48 | 0.905 |
| 49 | 49 | 0.302 |
| 5 | 5 | 0.672 |
| 50 | 50 | 0.335 |
| 51 | 51 | 0.466 |
| 52 | 52 | 0.912 |
| 53 | 53 | 0.347 |
| 54 | 54 | 0.892 |
| 55 | 55 | 0.0672 |
| 56 | 56 | 0.881 |
| 57 | 57 | 0.886 |
| 58 | 58 | 0.143 |
| 59 | 59 | 0.37 |
| 6 | 6 | 0.0925 |
| 60 | 60 | 0.671 |
| 61 | 61 | 0.639 |
| 62 | 62 | 0.111 |
| 63 | 63 | 0.227 |
| 64 | 64 | 0.68 |
| 65 | 65 | 0.58 |
| 66 | 66 | 0.0425 |
| 67 | 67 | 0.499 |
| 68 | 68 | 0.906 |
| 69 | 69 | 0.203 |
| 7 | 7 | 0.0993 |
| 70 | 70 | 0.261 |
| 71 | 71 | 0.0799 |
| 72 | 72 | 0.613 |
| 73 | 73 | 0.0135 |
| 74 | 74 | 0.00267 |
| 75 | 75 | 0.159 |
| 76 | 76 | 0.0285 |
| 77 | 77 | 0.213 |
| 78 | 78 | 0.0895 |
| 79 | 79 | 0.0423 |
| 8 | 8 | 0.854 |
| 80 | 80 | 0.0368 |
| 81 | 81 | 0.774 |
| 82 | 82 | 0.407 |
| 83 | 83 | 0.221 |
| 84 | 84 | 0.502 |
| 85 | 85 | 0.0937 |
| 86 | 86 | 0.632 |
| 87 | 87 | 0.519 |
| 88 | 88 | 0.924 |
| 89 | 89 | 0.489 |
| 9 | 9 | 0.694 |
| 90 | 90 | 0.104 |
| 91 | 91 | 0.585 |
| 92 | 92 | 0.175 |
| 93 | 93 | 0.815 |
| 94 | 94 | 0.83 |
| 95 | 95 | 0.824 |
| 96 | 96 | 0.141 |
| 97 | 97 | 0.29 |
| 98 | 98 | 0.105 |
| 99 | 99 | 0.433 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13092
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000273 human mesenchymal precursor cell- ovarian cancer-left ovary sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002119 (left ovary)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000273 (human mesenchymal precursor cell- ovarian cancer-left ovary sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
