FF:13437-144E8: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00005071 | ||
|accession_numbers=CAGE;DRX008605;DRR009477;DRZ000902;DRZ002287 | |accession_numbers=CAGE;DRX008605;DRR009477;DRZ000902;DRZ002287;DRZ012252;DRZ013637 | ||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000540,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000393,CL:0000211,CL:0000404,CL:0000255 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000540,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000393,CL:0000211,CL:0000404,CL:0000255 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|donor= rep2 | |||
|expression_enrichment_score=chr20:31350184..31350200,+!p1@DNMT3B!2.67!943.47!DNMT3B;;chr3:181429704..181429722,+!p1@SOX2!2.27!185.70!SOX2;;chr8:128428066..128428078,+!p1@POU5F1B!2.26!182.79!POU5F1B;;chr4:188916918..188916942,+!p1@ZFP42!2.18!151.22!ZFP42;;chr8:73921136..73921151,+!p2@TERF1!2.17!218.11!TERF1;;chr6:31138439..31138475,-!p1@POU5F1!1.98!93.47!POU5F1;;chr8:145701192..145701241,-!p1@FOXH1!1.93!83.50!FOXH1;;chr1:6304233..6304243,+!p1@HES3!1.81!63.15!HES3;;chr1:164528687..164528711,+!p6@PBX1!1.79!69.79!PBX1;;chr16:3149278..3149305,-!p1@ZSCAN10!1.79!60.24!ZSCAN10;;chr12:7941989..7942014,+!p1@NANOG!1.78!59.41!NANOG;;chr14:57272369..57272391,-!p2@OTX2!1.78!59.41!OTX2;;chr9:114287433..114287513,+!p1@ZNF483!1.77!145.82!ZNF483;;chr3:57234000..57234014,-!p1@HESX1!1.73!52.35!HESX1;;chr2:5832508..5832524,+!p1@SOX11!1.69!48.19!SOX11;;chr13:100623375..100623425,-!p1@ZIC5!1.66!44.87!ZIC5;;chr8:70983476..70983493,-!p1@PRDM14!1.65!43.21!PRDM14;;chr3:170076314..170076334,+!p2@SKIL!1.63!54.42!SKIL;;chrX:139587228..139587234,-!p1@SOX3!1.57!36.56!SOX3;;chrX:136648279..136648295,+!p1@ZIC3!1.56!35.31!ZIC3;;chr12:7942020..7942031,+!p2@NANOG!1.54!34.07!NANOG;;chr20:50418972..50419029,-!p1@SALL4!1.53!33.24!SALL4;;chr20:50419055..50419066,-!p3@SALL4!1.50!30.74!SALL4;;chr17:47892398..47892407,+!p2@KAT7!1.50!30.74!KAT7;;chr2:16080659..16080685,+!p1@MYCN!1.50!30.33!MYCN;;chr4:299227..299272,-!p1@ZNF732!1.48!29.50!ZNF732;;chr14:22005197..22005261,-!p3@SALL2!1.47!28.67!SALL2;;chr2:25475094..25475112,-!p3@DNMT3A!1.46!27.83!DNMT3A;;chr17:7493405..7493419,-!p1@SOX15!1.46!27.83!SOX15;;chr11:63684602..63684664,-!p1@RCOR2!1.44!51.51!RCOR2;;chr3:181429741..181429767,+!p2@SOX2!1.43!25.76!SOX2;;chr6:15246200..15246214,+!p2@JARID2!1.41!66.06!JARID2;;chr2:16081912..16081931,+!p2@MYCN!1.38!22.85!MYCN;;chr18:56530136..56530199,+!p3@ZNF532!1.37!33.24!ZNF532;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.60!ZBED1;;chr2:25475120..25475176,-!p2@DNMT3A!1.34!27.83!DNMT3A;;chr19:20188776..20188826,+!p1@ZNF90!1.33!54.01!ZNF90;;chr19:9609272..9609297,-!p1@ZNF560!1.33!20.36!ZNF560;;chr10:70320074..70320106,+!p1@TET1!1.31!38.22!TET1;;chr1:63788229..63788250,+!p1@FOXD3!1.30!19.11!FOXD3;;chr3:71355163..71355209,-!p5@FOXP1!1.29!25.76!FOXP1;;chr13:100634031..100634045,+!p1@ZIC2!1.27!17.45!ZIC2;;chr13:100638100..100638115,+!p4@ZIC2!1.27!17.45!ZIC2;;chr19:12163769..12163798,-!p1@ZNF878!1.26!22.02!ZNF878;;chr8:102504651..102504683,+!p1@GRHL2!1.26!17.03!GRHL2;;chr17:41622765..41622821,-!p2@ETV4!1.24!24.93!ETV4;;chr15:57511609..57511651,+!p2@TCF12!1.23!27.00!TCF12;;chr2:60780753..60780800,-!p1@BCL11A!1.22!76.03!BCL11A;;chr9:127533519..127533573,-!p2@NR6A1!1.21!18.28!NR6A1;;chr19:50922187..50922204,+!p1@SPIB!1.21!15.37!SPIB;;chr20:50418128..50418147,-!p2@SALL4!1.20!14.96!SALL4;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!1.19!31.57!SOHLH2;;chr19:58341656..58341694,+!p5@ZNF587!1.19!17.45!ZNF587;;chr8:145701166..145701187,-!p2@FOXH1!1.19!14.54!FOXH1;;chr7:26191809..26191890,+!p1@NFE2L3!1.18!68.96!NFE2L3;;chr8:40755333..40755352,-!p1@ZMAT4!1.18!14.12!ZMAT4;;chr14:69263043..69263069,-!p8@ZFP36L1!1.17!13.71!ZFP36L1;;chr3:48282587..48282603,+!p1@ZNF589!1.16!59.82!ZNF589;;chr19:20959098..20959117,+!p1@ZNF66P!1.15!54.42!ZNF66P;;chr7:14028743..14028799,-!p3@ETV1!1.14!16.20!ETV1;;chr20:31368212..31368235,+!p2@DNMT3B!1.14!12.88!DNMT3B;;chr17:41623692..41623715,-!p1@ETV4!1.13!53.59!ETV4;;chr6:20402102..20402152,+!p1@E2F3!1.12!50.27!E2F3;;chr19:20011775..20011800,+!p2@ZNF93!1.12!22.02!ZNF93;;chr19:46367576..46367592,+!p1@FOXA3!1.12!12.05!FOXA3;;chr1:201979703..201979721,+!p2@ELF3!1.12!12.05!ELF3;;chr13:100634004..100634025,+!p2@ZIC2!1.12!12.05!ZIC2;;chr14:22005343..22005364,-!p5@SALL2!1.12!12.05!SALL2;;chr10:48355030..48355090,+!p1@ZNF488!1.11!15.37!ZNF488;;chr5:124084493..124084524,-!p2@ZNF608!1.08!24.93!ZNF608;;chr7:64254834..64254854,+!p2@ZNF138!1.08!19.94!ZNF138;;chr12:3068544..3068597,+!p1@TEAD4!1.07!65.64!TEAD4;;chr8:73921067..73921078,+!p3@TERF1!1.07!17.03!TERF1;;chrX:136648297..136648319,+!p3@ZIC3!1.07!10.80!ZIC3;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!1.06!40.30!HNRPK;;chr1:8934931..8934947,-!p4@ENO1!1.06!34.90!ENO1;;chr17:46132044..46132080,+!p4@NFE2L1!1.06!10.39!NFE2L1;;chr2:16082155..16082169,+!p3@MYCN!1.06!10.39!MYCN;;chr19:23433144..23433204,-!p1@ZNF724P!1.05!46.94!ZNF724P;;chr18:56531584..56531646,+!p4@ZNF532!1.05!13.71!ZNF532;;chr12:66218836..66218888,+!p1@HMGA2!1.04!94.30!HMGA2;;chr9:77112244..77112262,+!p1@RORB!1.04!11.22!RORB;;chr10:135043702..135043729,+!p1@UTF1!1.04!9.97!UTF1;;chr10:114710098..114710130,+!p2@TCF7L2!1.03!74.78!TCF7L2;;chr14:21994337..21994442,-!p1@SALL2!1.03!27.00!SALL2;;chr6:21593973..21593988,+!p1@SOX4!1.02!343.57!SOX4;;chr6:21597765..21597779,+!p2@SOX4!1.02!78.10!SOX4;;chr19:23299814..23299844,+!p1@ZNF730!1.02!11.63!ZNF730;;chrX:136648643..136648711,+!p2@ZIC3!1.02!9.56!ZIC3;;chr19:20011744..20011770,+!p1@ZNF93!1.00!35.31!ZNF93;;chrX:84499081..84499115,+!p2@ZNF711!1.00!13.29!ZNF711;;chr19:122031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| |expression_enrichment_score=chr20:31350184..31350200,+!p1@DNMT3B!2.67!943.47!DNMT3B;;chr3:181429704..181429722,+!p1@SOX2!2.27!185.70!SOX2;;chr8:128428066..128428078,+!p1@POU5F1B!2.26!182.79!POU5F1B;;chr4:188916918..188916942,+!p1@ZFP42!2.18!151.22!ZFP42;;chr8:73921136..73921151,+!p2@TERF1!2.17!218.11!TERF1;;chr6:31138439..31138475,-!p1@POU5F1!1.98!93.47!POU5F1;;chr8:145701192..145701241,-!p1@FOXH1!1.93!83.50!FOXH1;;chr1:6304233..6304243,+!p1@HES3!1.81!63.15!HES3;;chr1:164528687..164528711,+!p6@PBX1!1.79!69.79!PBX1;;chr16:3149278..3149305,-!p1@ZSCAN10!1.79!60.24!ZSCAN10;;chr12:7941989..7942014,+!p1@NANOG!1.78!59.41!NANOG;;chr14:57272369..57272391,-!p2@OTX2!1.78!59.41!OTX2;;chr9:114287433..114287513,+!p1@ZNF483!1.77!145.82!ZNF483;;chr3:57234000..57234014,-!p1@HESX1!1.73!52.35!HESX1;;chr2:5832508..5832524,+!p1@SOX11!1.69!48.19!SOX11;;chr13:100623375..100623425,-!p1@ZIC5!1.66!44.87!ZIC5;;chr8:70983476..70983493,-!p1@PRDM14!1.65!43.21!PRDM14;;chr3:170076314..170076334,+!p2@SKIL!1.63!54.42!SKIL;;chrX:139587228..139587234,-!p1@SOX3!1.57!36.56!SOX3;;chrX:136648279..136648295,+!p1@ZIC3!1.56!35.31!ZIC3;;chr12:7942020..7942031,+!p2@NANOG!1.54!34.07!NANOG;;chr20:50418972..50419029,-!p1@SALL4!1.53!33.24!SALL4;;chr20:50419055..50419066,-!p3@SALL4!1.50!30.74!SALL4;;chr17:47892398..47892407,+!p2@KAT7!1.50!30.74!KAT7;;chr2:16080659..16080685,+!p1@MYCN!1.50!30.33!MYCN;;chr4:299227..299272,-!p1@ZNF732!1.48!29.50!ZNF732;;chr14:22005197..22005261,-!p3@SALL2!1.47!28.67!SALL2;;chr2:25475094..25475112,-!p3@DNMT3A!1.46!27.83!DNMT3A;;chr17:7493405..7493419,-!p1@SOX15!1.46!27.83!SOX15;;chr11:63684602..63684664,-!p1@RCOR2!1.44!51.51!RCOR2;;chr3:181429741..181429767,+!p2@SOX2!1.43!25.76!SOX2;;chr6:15246200..15246214,+!p2@JARID2!1.41!66.06!JARID2;;chr2:16081912..16081931,+!p2@MYCN!1.38!22.85!MYCN;;chr18:56530136..56530199,+!p3@ZNF532!1.37!33.24!ZNF532;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.60!ZBED1;;chr2:25475120..25475176,-!p2@DNMT3A!1.34!27.83!DNMT3A;;chr19:20188776..20188826,+!p1@ZNF90!1.33!54.01!ZNF90;;chr19:9609272..9609297,-!p1@ZNF560!1.33!20.36!ZNF560;;chr10:70320074..70320106,+!p1@TET1!1.31!38.22!TET1;;chr1:63788229..63788250,+!p1@FOXD3!1.30!19.11!FOXD3;;chr3:71355163..71355209,-!p5@FOXP1!1.29!25.76!FOXP1;;chr13:100634031..100634045,+!p1@ZIC2!1.27!17.45!ZIC2;;chr13:100638100..100638115,+!p4@ZIC2!1.27!17.45!ZIC2;;chr19:12163769..12163798,-!p1@ZNF878!1.26!22.02!ZNF878;;chr8:102504651..102504683,+!p1@GRHL2!1.26!17.03!GRHL2;;chr17:41622765..41622821,-!p2@ETV4!1.24!24.93!ETV4;;chr15:57511609..57511651,+!p2@TCF12!1.23!27.00!TCF12;;chr2:60780753..60780800,-!p1@BCL11A!1.22!76.03!BCL11A;;chr9:127533519..127533573,-!p2@NR6A1!1.21!18.28!NR6A1;;chr19:50922187..50922204,+!p1@SPIB!1.21!15.37!SPIB;;chr20:50418128..50418147,-!p2@SALL4!1.20!14.96!SALL4;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!1.19!31.57!SOHLH2;;chr19:58341656..58341694,+!p5@ZNF587!1.19!17.45!ZNF587;;chr8:145701166..145701187,-!p2@FOXH1!1.19!14.54!FOXH1;;chr7:26191809..26191890,+!p1@NFE2L3!1.18!68.96!NFE2L3;;chr8:40755333..40755352,-!p1@ZMAT4!1.18!14.12!ZMAT4;;chr14:69263043..69263069,-!p8@ZFP36L1!1.17!13.71!ZFP36L1;;chr3:48282587..48282603,+!p1@ZNF589!1.16!59.82!ZNF589;;chr19:20959098..20959117,+!p1@ZNF66P!1.15!54.42!ZNF66P;;chr7:14028743..14028799,-!p3@ETV1!1.14!16.20!ETV1;;chr20:31368212..31368235,+!p2@DNMT3B!1.14!12.88!DNMT3B;;chr17:41623692..41623715,-!p1@ETV4!1.13!53.59!ETV4;;chr6:20402102..20402152,+!p1@E2F3!1.12!50.27!E2F3;;chr19:20011775..20011800,+!p2@ZNF93!1.12!22.02!ZNF93;;chr19:46367576..46367592,+!p1@FOXA3!1.12!12.05!FOXA3;;chr1:201979703..201979721,+!p2@ELF3!1.12!12.05!ELF3;;chr13:100634004..100634025,+!p2@ZIC2!1.12!12.05!ZIC2;;chr14:22005343..22005364,-!p5@SALL2!1.12!12.05!SALL2;;chr10:48355030..48355090,+!p1@ZNF488!1.11!15.37!ZNF488;;chr5:124084493..124084524,-!p2@ZNF608!1.08!24.93!ZNF608;;chr7:64254834..64254854,+!p2@ZNF138!1.08!19.94!ZNF138;;chr12:3068544..3068597,+!p1@TEAD4!1.07!65.64!TEAD4;;chr8:73921067..73921078,+!p3@TERF1!1.07!17.03!TERF1;;chrX:136648297..136648319,+!p3@ZIC3!1.07!10.80!ZIC3;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!1.06!40.30!HNRPK;;chr1:8934931..8934947,-!p4@ENO1!1.06!34.90!ENO1;;chr17:46132044..46132080,+!p4@NFE2L1!1.06!10.39!NFE2L1;;chr2:16082155..16082169,+!p3@MYCN!1.06!10.39!MYCN;;chr19:23433144..23433204,-!p1@ZNF724P!1.05!46.94!ZNF724P;;chr18:56531584..56531646,+!p4@ZNF532!1.05!13.71!ZNF532;;chr12:66218836..66218888,+!p1@HMGA2!1.04!94.30!HMGA2;;chr9:77112244..77112262,+!p1@RORB!1.04!11.22!RORB;;chr10:135043702..135043729,+!p1@UTF1!1.04!9.97!UTF1;;chr10:114710098..114710130,+!p2@TCF7L2!1.03!74.78!TCF7L2;;chr14:21994337..21994442,-!p1@SALL2!1.03!27.00!SALL2;;chr6:21593973..21593988,+!p1@SOX4!1.02!343.57!SOX4;;chr6:21597765..21597779,+!p2@SOX4!1.02!78.10!SOX4;;chr19:23299814..23299844,+!p1@ZNF730!1.02!11.63!ZNF730;;chrX:136648643..136648711,+!p2@ZIC3!1.02!9.56!ZIC3;;chr19:20011744..20011770,+!p1@ZNF93!1.00!35.31!ZNF93;;chrX:84499081..84499115,+!p2@ZNF711!1.00!13.29!ZNF711;;chr19:12203100..12203132,+!p1@ZNF788!0.99!18.28!ZNF788;;chr12:66218378..66218401,+!p6@HMGA2!0.99!13.71!HMGA2;;chr9:127533582..127533615,-!p1@NR6A1!0.99!13.29!NR6A1;;chr19:23299851..23299880,+!p2@ZNF730!0.99!8.72!ZNF730;;chr14:22005018..22005040,-!p6@SALL2!0.99!8.72!SALL2;;chr12:53856284..53856299,+!p3@PCBP2!0.98!25.34!PCBP2;;chr11:6947720..6947812,+!p1@ZNF215!0.98!11.22!ZNF215;;chr6:126070769..126070801,+!p1@HEY2!0.97!9.56!HEY2;;chr10:126138597..126138612,-!p1@NKX1-2!0.97!8.31!NKX1-2;;chr2:16080635..16080650,+!p4@MYCN!0.97!8.31!MYCN;;chr15:74833584..74833626,+!p1@ARID3B!0.95!18.69!ARID3B;;chr8:86089627..86089653,+!p3@E2F5!0.95!9.14!E2F5;;chr1:201979743..201979762,+!p1@ELF3!0.95!7.89!ELF3;;chr2:5832493..5832507,+!p2@SOX11!0.95!7.89!SOX11;;chr19:58400372..58400411,-!p1@ZNF814!0.94!41.13!ZNF814;;chr19:19976714..19976729,+!p3@ZNF253!0.94!14.96!ZNF253;;chr19:24097706..24097731,+!p2@ZNF726!0.94!14.96!ZNF726;;chr6:15245797..15245818,+!p8@JARID2!0.94!9.56!JARID2;;chr2:85360499..85360598,+!p1@TCF7L1!0.93!43.62!TCF7L1;;chr19:22034809..22034878,-!p2@ZNF43!0.93!27.00!ZNF43;;chr2:60778035..60778060,-!p4@BCL11A!0.93!9.14!BCL11A;;chr11:120107344..120107351,+!p1@POU2F3!0.93!9.14!POU2F3;;chr11:128457446..128457461,-!p4@ETS1!0.93!7.48!ETS1;;chr12:7941942..7941949,+!p3@NANOG!0.93!7.48!NANOG;;chr16:30406423..30406447,+!p4@ZNF48!0.93!7.48!ZNF48;;chr6:34204672..34204692,+!p1@HMGA1!0.92!865.36!HMGA1;;chr6:15246217..15246228,+!p3@JARID2!0.92!13.29!JARID2;;chr2:166326200..166326216,+!p1@CSRNP3!0.92!10.80!CSRNP3;;chr6:15246261..15246312,+!p1@JARID2!0.91!182.38!JARID2;;chr20:42295713..42295738,+!p2@MYBL2!0.91!43.62!MYBL2;;chr17:41622731..41622764,-!p5@ETV4!0.91!7.06!ETV4;;chr18:53254566..53254567,-!p8@TCF4!0.90!11.63!TCF4;;chr12:7079780..7079791,-!p2@PHB2!0.89!37.39!PHB2;;chr4:26322267..26322334,+!p3@RBPJ!0.89!17.03!RBPJ;;chr10:114710218..114710229,+!p4@TCF7L2!0.89!13.71!TCF7L2;;chr19:9695169..9695188,-!p1@ZNF121!0.88!121.31!ZNF121;;chr19:53758058..53758088,-!p2@ZNF677!0.88!22.85!ZNF677;;chr19:925727..925784,+!p3@ARID3A!0.88!14.54!ARID3A;;chr19:46800289..46800327,+!p2@HIF3A!0.88!6.65!HIF3A;;chr1:43162358..43162369,+!p11@YBX1!0.88!6.65!YBX1;;chr8:102504690..102504704,+!p3@GRHL2!0.88!6.65!GRHL2;;chr8:70983443..70983460,-!p2@PRDM14!0.88!6.65!PRDM14;;chr19:58400344..58400364,-!p2@ZNF814!0.87!9.56!ZNF814;;chr7:14029283..14029311,-!p1@ETV1!0.86!34.90!ETV1;;chr19:48774586..48774670,+!p1@ZNF114!0.86!7.89!ZNF114;;chr6:31138055..31138073,-!p3@POU5F1!0.86!6.23!POU5F1;;chr8:70983506..70983522,-!p3@PRDM14!0.86!6.23!PRDM14;;chr17:7197911..7197964,-!p1@YBX2!0.86!6.23!YBX2;;chr9:77112225..77112238,+!p2@RORB!0.86!6.23!RORB;;chr12:66358080..66358094,+!p15@HMGA2!0.86!6.23!HMGA2;;chr19:21264991..21265026,+!p1@ZNF714!0.85!41.96!ZNF714;;chr16:29818160..29818188,+!p6@MAZ!0.85!30.33!MAZ;;chr10:114710244..114710257,+!p3@TCF7L2!0.85!17.45!TCF7L2;;chr15:42749722..42749739,-!p2@ZFP106!0.85!11.22!ZFP106;;chr19:21265028..21265052,+!p2@ZNF714!0.85!11.22!ZNF714;;chr16:29818199..29818216,+!p11@MAZ!0.85!10.39!MAZ;;chr3:33482052..33482116,-!p2@UBP1!0.85!9.56!UBP1;;chr19:56671612..56671626,+!p4@ZNF444!0.84!9.56!ZNF444;;chr12:7077134..7077154,-!p3@PHB2!0.84!7.48!PHB2;;chr7:14028488..14028516,-!p2@ETV1!0.84!6.65!ETV1;;chr13:41240737..41240787,-!p1@FOXO1!0.83!73.95!FOXO1;;chr5:138609782..138609826,+!p5@MATR3!0.83!39.88!MATR3;;chr7:64363638..64363667,+!p1@ZNF273!0.83!31.16!ZNF273;;chr3:48282536..48282586,+!p2@ZNF589!0.83!16.62!ZNF589;;chr8:60031682..60031710,-!p2@TOX!0.83!9.56!TOX;;chr13:100623360..100623373,-!p2@ZIC5!0.83!5.82!ZIC5;;chr13:100638124..100638136,+!p7@ZIC2!0.83!5.82!ZIC2;;chr15:85147127..85147142,+!p5@ZSCAN2!0.83!5.82!ZSCAN2;;chr2:42795745..42795824,+!p1@MTA3!0.82!56.08!MTA3;;chr2:60780607..60780624,-!p2@BCL11A!0.82!18.28!BCL11A;;chr14:21994449..21994524,-!p2@SALL2!0.82!17.86!SALL2;;chr19:19779619..19779670,+!p1@ZNF101!0.82!16.62!ZNF101;;chr12:66218183..66218209,+!p4@HMGA2!0.82!11.22!HMGA2;;chr17:41622925..41622976,-!p3@ETV4!0.82!8.72!ETV4;;chrX:84498989..84499003,+!p1@ZNF711!0.82!7.89!ZNF711;;chr12:19592405..19592492,+!p2@AEBP2!0.81!51.10!AEBP2;;chr14:55493763..55493824,-!p1@WDHD1!0.81!44.87!WDHD1;;chr3:141747441..141747452,-!p4@TFDP2!0.81!7.89!TFDP2;;chr14:75746722..75746777,+!p2@FOS!0.81!7.06!FOS;;chr15:85144307..85144329,+!p2@ZSCAN2!0.81!6.23!ZSCAN2;;chr19:47523058..47523114,+!p1@NPAS1!0.81!5.40!NPAS1;;chr19:54024313..54024361,+!p7@ZNF331!0.81!5.40!ZNF331;;chr20:31396411..31396416,+!p15@DNMT3B!0.81!5.40!DNMT3B;;chr22:21771656..21771662,+!p1@HIC2!0.81!5.40!HIC2;;chr3:141747459..141747475,-!p1@TFDP2!0.80!47.78!TFDP2;;chr19:20150268..20150298,-!p2@ZNF682!0.80!10.39!ZNF682;;chr19:23941647..23941672,-!p2@ZNF681!0.80!9.14!ZNF681;;chr1:247171316..247171336,-!p3@ZNF695!0.80!8.31!ZNF695;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.80!7.89!TGIF2;;chr20:32274179..32274213,-!p1@E2F1!0.79!37.39!E2F1;;chr12:80083544..80083558,-!p13@PAWR!0.79!6.65!PAWR;;chr19:52408227..52408243,-!p2@ZNF649!0.78!12.05!ZNF649;;chr17:7492684..7492778,-!p2@SOX15!0.78!11.22!SOX15;;chr22:42269885..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| ||
|ffid_belonging_in_development=CL:0000133,CL:0000031,CL:0000221 | |ffid_belonging_in_development=CL:0000133,CL:0000031,CL:0000221 | ||
Line 41: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep2.CNhs13839.13437-144E8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep2.CNhs13839.13437-144E8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep2.CNhs13839.13437-144E8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep2.CNhs13839.13437-144E8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep2.CNhs13839.13437-144E8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:13437-144E8 | |id=FF:13437-144E8 | ||
|is_a=FF:0000210;;FF:0200003 | |is_a=FF:0000210;;FF:0200003 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13839 | |library_id=CNhs13839 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs13839 | ||
|name=iPS differentiation to neuron, control donor C32-CRL1502 | |microRNAs= | ||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;13437 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;13437 | |||
|name=iPS differentiation to neuron, control donor C32-CRL1502 | |||
|namespace= | |namespace= | ||
|part_of= | |part_of= | ||
Line 53: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| ||
Line 65: | Line 76: | ||
|rna_rin=10 | |rna_rin=10 | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.44E+10 | ||
|rna_weight_ug=5 | |rna_weight_ug=5 | ||
|sample_age=12wk gestation | |sample_age=12wk gestation | ||
|sample_category=time courses | |sample_category=time courses | ||
Line 88: | Line 99: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|time= day00 | |||
|timecourse=Human_iPS_to_neuron_(wt)_2 | |||
|top_motifs=OCT4_SOX2{dimer}:3.70658150831;POU2F1..3:2.40284466901;SOX{8,9,10}:2.06234533895;NFY{A,B,C}:1.99987753593;E2F1..5:1.78589498924;FOXM1:1.72383992213;SNAI1..3:1.65323259242;PBX1:1.59256171083;GFI1:1.53279507576;ALX1:1.4846364112;ARID5B:1.47290431877;YY1:1.38416982139;UFEwm:1.35983986516;CDX1,2,4:1.35639401915;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.33266149788;CDC5L:1.32204860513;ZNF384:1.29508066191;ZNF143:1.25276510097;TOPORS:1.24003768598;FOX{I1,J2}:1.23112549942;LMO2:1.19897139974;FOXD3:1.19264078594;KLF4:1.15879702296;ONECUT1,2:1.15565809765;PATZ1:1.11671632992;SP1:1.0929515358;ZEB1:1.08568205478;PAX8:1.06780111019;CUX2:1.05602572053;RORA:1.04779911904;SOX2:1.04753192555;IKZF2:1.0087678056;MYOD1:0.968243633943;AIRE:0.952168581182;XCPE1{core}:0.900105501251;ZBTB16:0.899616422095;EVI1:0.891377919269;RBPJ:0.876020398473;NRF1:0.841202069577;ZIC1..3:0.801266600931;ATF4:0.754403049101;PITX1..3:0.725699064044;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.707311790232;HIF1A:0.689404325379;ELK1,4_GABP{A,B1}:0.66430536129;SOX17:0.652426704722;bHLH_family:0.632506277046;MZF1:0.625544003862;NKX2-2,8:0.600593073722;ALX4:0.566678599879;TBP:0.562611672425;GATA4:0.547334948551;T:0.543681340944;FOXQ1:0.492168115803;EBF1:0.479103286036;HOX{A4,D4}:0.450739329695;TFDP1:0.442746829043;POU3F1..4:0.428136552579;NKX6-1,2:0.386821925959;FOXP1:0.380158692176;ZBTB6:0.328066135036;PAX1,9:0.325979567217;TBX4,5:0.324704123962;NR5A1,2:0.309931102353;MYB:0.298665807548;STAT5{A,B}:0.23888083293;FOXL1:0.217095815731;LEF1_TCF7_TCF7L1,2:0.206165331658;REST:0.204248712245;NKX3-1:0.196230693592;LHX3,4:0.191402209771;HAND1,2:0.173607864695;NANOG{mouse}:0.169035973752;CREB1:0.158499935079;HOX{A6,A7,B6,B7}:0.149734578168;TP53:0.142567629002;ZFP161:0.111641457283;GFI1B:0.0781185096679;VSX1,2:0.0742736511663;TEAD1:0.0620714659012;STAT1,3:0.0422845260575;MYFfamily:0.0325023802984;HNF4A_NR2F1,2:-0.0248758016425;NR6A1:-0.0379096862669;CRX:-0.0590905583696;NKX2-1,4:-0.0691133273453;NKX2-3_NKX2-5:-0.0746167888042;MAZ:-0.0807440919135;JUN:-0.0820377558768;POU5F1:-0.0866233115337;MTF1:-0.100943896691;ESRRA:-0.103745722878;FOXN1:-0.13717529705;MTE{core}:-0.145083227716;ESR1:-0.157285295722;FOXO1,3,4:-0.17660331188;PRDM1:-0.188817552564;BREu{core}:-0.191552003583;RFX1:-0.203115230187;XBP1:-0.213022813211;ATF5_CREB3:-0.221987551345;PAX4:-0.229226979266;HOX{A5,B5}:-0.253755320518;ZNF423:-0.2721368271;HNF1A:-0.280800381877;NFKB1_REL_RELA:-0.285386959171;HMGA1,2:-0.309884892854;HIC1:-0.348464409476;NFE2L1:-0.35305909892;ATF2:-0.386890378214;SPZ1:-0.411043529282;POU6F1:-0.413446670064;PAX5:-0.415088226974;RREB1:-0.431000528737;HMX1:-0.434905084624;NANOG:-0.43879475892;RFX2..5_RFXANK_RFXAP:-0.450942555427;RXR{A,B,G}:-0.454910821287;GTF2I:-0.464195037989;EN1,2:-0.470695763889;DMAP1_NCOR{1,2}_SMARC:-0.479729276744;NHLH1,2:-0.491096420133;MED-1{core}:-0.500293048528;PAX2:-0.505887397697;FOX{F1,F2,J1}:-0.511942165268;GATA6:-0.532038414248;SPI1:-0.557107887375;GCM1,2:-0.578655750814;BACH2:-0.589227056506;NR1H4:-0.616248675398;TFAP2B:-0.637603746777;TLX2:-0.641154084538;TFAP2{A,C}:-0.650893754566;SPIB:-0.658113417652;MYBL2:-0.675505930101;HSF1,2:-0.680375860914;NKX3-2:-0.700635524831;PAX3,7:-0.704432550107;MEF2{A,B,C,D}:-0.718623533844;NFE2L2:-0.725636856395;FOXP3:-0.731926856766;TEF:-0.741173129354;SREBF1,2:-0.746075555123;POU1F1:-0.748640116887;FOX{D1,D2}:-0.76265336939;NFE2:-0.776321737317;IKZF1:-0.788190778061;RXRA_VDR{dimer}:-0.79088293364;FOS_FOS{B,L1}_JUN{B,D}:-0.790952733821;AR:-0.804857013803;SRF:-0.811127423068;TFAP4:-0.813960044076;NFIX:-0.815996817801;RUNX1..3:-0.824571949938;DBP:-0.8689696891;AHR_ARNT_ARNT2:-0.87449467787;BPTF:-0.941507479988;EGR1..3:-0.945106985665;FOSL2:-0.949802977137;TFCP2:-0.986854101208;ELF1,2,4:-0.999594887032;SOX5:-1.00953206339;GTF2A1,2:-1.04450184588;HLF:-1.04629021875;NR3C1:-1.06146785394;ZNF238:-1.09202414544;HBP1_HMGB_SSRP1_UBTF:-1.15603514203;IRF1,2:-1.16096486331;ETS1,2:-1.16523939015;ZNF148:-1.19487948226;HES1:-1.26299888721;IRF7:-1.30533456968;GZF1:-1.3166059819;GLI1..3:-1.32018069655;NFIL3:-1.3962124098;PRRX1,2:-1.44512676417;FOXA2:-1.47995114662;CEBPA,B_DDIT3:-1.48256359873;STAT2,4,6:-1.50616615697;TAL1_TCF{3,4,12}:-1.59297997819;NFATC1..3:-1.63635070782;ADNP_IRX_SIX_ZHX:-1.65324471722;EP300:-1.74620134881;PAX6:-1.79713437317;TLX1..3_NFIC{dimer}:-1.79919658934;ATF6:-1.82040749598;SMAD1..7,9:-1.84038436317;PDX1:-1.84254183767;TGIF1:-1.95443901996;MAFB:-2.08345472166;HOXA9_MEIS1:-2.09904656777;PPARG:-2.14476663193 | |top_motifs=OCT4_SOX2{dimer}:3.70658150831;POU2F1..3:2.40284466901;SOX{8,9,10}:2.06234533895;NFY{A,B,C}:1.99987753593;E2F1..5:1.78589498924;FOXM1:1.72383992213;SNAI1..3:1.65323259242;PBX1:1.59256171083;GFI1:1.53279507576;ALX1:1.4846364112;ARID5B:1.47290431877;YY1:1.38416982139;UFEwm:1.35983986516;CDX1,2,4:1.35639401915;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.33266149788;CDC5L:1.32204860513;ZNF384:1.29508066191;ZNF143:1.25276510097;TOPORS:1.24003768598;FOX{I1,J2}:1.23112549942;LMO2:1.19897139974;FOXD3:1.19264078594;KLF4:1.15879702296;ONECUT1,2:1.15565809765;PATZ1:1.11671632992;SP1:1.0929515358;ZEB1:1.08568205478;PAX8:1.06780111019;CUX2:1.05602572053;RORA:1.04779911904;SOX2:1.04753192555;IKZF2:1.0087678056;MYOD1:0.968243633943;AIRE:0.952168581182;XCPE1{core}:0.900105501251;ZBTB16:0.899616422095;EVI1:0.891377919269;RBPJ:0.876020398473;NRF1:0.841202069577;ZIC1..3:0.801266600931;ATF4:0.754403049101;PITX1..3:0.725699064044;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.707311790232;HIF1A:0.689404325379;ELK1,4_GABP{A,B1}:0.66430536129;SOX17:0.652426704722;bHLH_family:0.632506277046;MZF1:0.625544003862;NKX2-2,8:0.600593073722;ALX4:0.566678599879;TBP:0.562611672425;GATA4:0.547334948551;T:0.543681340944;FOXQ1:0.492168115803;EBF1:0.479103286036;HOX{A4,D4}:0.450739329695;TFDP1:0.442746829043;POU3F1..4:0.428136552579;NKX6-1,2:0.386821925959;FOXP1:0.380158692176;ZBTB6:0.328066135036;PAX1,9:0.325979567217;TBX4,5:0.324704123962;NR5A1,2:0.309931102353;MYB:0.298665807548;STAT5{A,B}:0.23888083293;FOXL1:0.217095815731;LEF1_TCF7_TCF7L1,2:0.206165331658;REST:0.204248712245;NKX3-1:0.196230693592;LHX3,4:0.191402209771;HAND1,2:0.173607864695;NANOG{mouse}:0.169035973752;CREB1:0.158499935079;HOX{A6,A7,B6,B7}:0.149734578168;TP53:0.142567629002;ZFP161:0.111641457283;GFI1B:0.0781185096679;VSX1,2:0.0742736511663;TEAD1:0.0620714659012;STAT1,3:0.0422845260575;MYFfamily:0.0325023802984;HNF4A_NR2F1,2:-0.0248758016425;NR6A1:-0.0379096862669;CRX:-0.0590905583696;NKX2-1,4:-0.0691133273453;NKX2-3_NKX2-5:-0.0746167888042;MAZ:-0.0807440919135;JUN:-0.0820377558768;POU5F1:-0.0866233115337;MTF1:-0.100943896691;ESRRA:-0.103745722878;FOXN1:-0.13717529705;MTE{core}:-0.145083227716;ESR1:-0.157285295722;FOXO1,3,4:-0.17660331188;PRDM1:-0.188817552564;BREu{core}:-0.191552003583;RFX1:-0.203115230187;XBP1:-0.213022813211;ATF5_CREB3:-0.221987551345;PAX4:-0.229226979266;HOX{A5,B5}:-0.253755320518;ZNF423:-0.2721368271;HNF1A:-0.280800381877;NFKB1_REL_RELA:-0.285386959171;HMGA1,2:-0.309884892854;HIC1:-0.348464409476;NFE2L1:-0.35305909892;ATF2:-0.386890378214;SPZ1:-0.411043529282;POU6F1:-0.413446670064;PAX5:-0.415088226974;RREB1:-0.431000528737;HMX1:-0.434905084624;NANOG:-0.43879475892;RFX2..5_RFXANK_RFXAP:-0.450942555427;RXR{A,B,G}:-0.454910821287;GTF2I:-0.464195037989;EN1,2:-0.470695763889;DMAP1_NCOR{1,2}_SMARC:-0.479729276744;NHLH1,2:-0.491096420133;MED-1{core}:-0.500293048528;PAX2:-0.505887397697;FOX{F1,F2,J1}:-0.511942165268;GATA6:-0.532038414248;SPI1:-0.557107887375;GCM1,2:-0.578655750814;BACH2:-0.589227056506;NR1H4:-0.616248675398;TFAP2B:-0.637603746777;TLX2:-0.641154084538;TFAP2{A,C}:-0.650893754566;SPIB:-0.658113417652;MYBL2:-0.675505930101;HSF1,2:-0.680375860914;NKX3-2:-0.700635524831;PAX3,7:-0.704432550107;MEF2{A,B,C,D}:-0.718623533844;NFE2L2:-0.725636856395;FOXP3:-0.731926856766;TEF:-0.741173129354;SREBF1,2:-0.746075555123;POU1F1:-0.748640116887;FOX{D1,D2}:-0.76265336939;NFE2:-0.776321737317;IKZF1:-0.788190778061;RXRA_VDR{dimer}:-0.79088293364;FOS_FOS{B,L1}_JUN{B,D}:-0.790952733821;AR:-0.804857013803;SRF:-0.811127423068;TFAP4:-0.813960044076;NFIX:-0.815996817801;RUNX1..3:-0.824571949938;DBP:-0.8689696891;AHR_ARNT_ARNT2:-0.87449467787;BPTF:-0.941507479988;EGR1..3:-0.945106985665;FOSL2:-0.949802977137;TFCP2:-0.986854101208;ELF1,2,4:-0.999594887032;SOX5:-1.00953206339;GTF2A1,2:-1.04450184588;HLF:-1.04629021875;NR3C1:-1.06146785394;ZNF238:-1.09202414544;HBP1_HMGB_SSRP1_UBTF:-1.15603514203;IRF1,2:-1.16096486331;ETS1,2:-1.16523939015;ZNF148:-1.19487948226;HES1:-1.26299888721;IRF7:-1.30533456968;GZF1:-1.3166059819;GLI1..3:-1.32018069655;NFIL3:-1.3962124098;PRRX1,2:-1.44512676417;FOXA2:-1.47995114662;CEBPA,B_DDIT3:-1.48256359873;STAT2,4,6:-1.50616615697;TAL1_TCF{3,4,12}:-1.59297997819;NFATC1..3:-1.63635070782;ADNP_IRX_SIX_ZHX:-1.65324471722;EP300:-1.74620134881;PAX6:-1.79713437317;TLX1..3_NFIC{dimer}:-1.79919658934;ATF6:-1.82040749598;SMAD1..7,9:-1.84038436317;PDX1:-1.84254183767;TGIF1:-1.95443901996;MAFB:-2.08345472166;HOXA9_MEIS1:-2.09904656777;PPARG:-2.14476663193 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:13437-144E8;search_select_hide=table117:FF:13437-144E8 | |||
}} | }} |
Latest revision as of 18:59, 4 June 2020
Name: | iPS differentiation to neuron, control donor C32-CRL1502 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13839 |
Sample type: | time courses |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13839
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13839
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.32 |
10 | 10 | 0.516 |
100 | 100 | 0.495 |
101 | 101 | 0.788 |
102 | 102 | 0.59 |
103 | 103 | 0.11 |
104 | 104 | 0.64 |
105 | 105 | 0.0434 |
106 | 106 | 0.0498 |
107 | 107 | 0.29 |
108 | 108 | 0.901 |
109 | 109 | 0.472 |
11 | 11 | 0.353 |
110 | 110 | 0.596 |
111 | 111 | 0.0934 |
112 | 112 | 0.568 |
113 | 113 | 0.0503 |
114 | 114 | 0.0931 |
115 | 115 | 0.0343 |
116 | 116 | 0.601 |
117 | 117 | 0.865 |
118 | 118 | 0.648 |
119 | 119 | 0.278 |
12 | 12 | 0.887 |
120 | 120 | 0.364 |
121 | 121 | 0.448 |
122 | 122 | 0.492 |
123 | 123 | 0.58 |
124 | 124 | 0.165 |
125 | 125 | 0.481 |
126 | 126 | 0.438 |
127 | 127 | 0.394 |
128 | 128 | 0.373 |
129 | 129 | 0.469 |
13 | 13 | 0.652 |
130 | 130 | 0.863 |
131 | 131 | 0.735 |
132 | 132 | 0.911 |
133 | 133 | 0.0689 |
134 | 134 | 0.345 |
135 | 135 | 0.00605 |
136 | 136 | 0.0506 |
137 | 137 | 0.342 |
138 | 138 | 0.126 |
139 | 139 | 0.022 |
14 | 14 | 0.459 |
140 | 140 | 0.241 |
141 | 141 | 0.828 |
142 | 142 | 0.352 |
143 | 143 | 0.0103 |
144 | 144 | 0.612 |
145 | 145 | 0.571 |
146 | 146 | 0.268 |
147 | 147 | 0.687 |
148 | 148 | 0.0997 |
149 | 149 | 0.0976 |
15 | 15 | 0.102 |
150 | 150 | 0.95 |
151 | 151 | 0.0298 |
152 | 152 | 0.365 |
153 | 153 | 0.16 |
154 | 154 | 0.531 |
155 | 155 | 0.899 |
156 | 156 | 0.5 |
157 | 157 | 0.661 |
158 | 158 | 0.101 |
159 | 159 | 0.158 |
16 | 16 | 0.564 |
160 | 160 | 0.498 |
161 | 161 | 0.844 |
162 | 162 | 0.227 |
163 | 163 | 0.407 |
164 | 164 | 0.668 |
165 | 165 | 0.61 |
166 | 166 | 0.867 |
167 | 167 | 0.215 |
168 | 168 | 0.516 |
169 | 169 | 0.00216 |
17 | 17 | 0.225 |
18 | 18 | 0.177 |
19 | 19 | 0.25 |
2 | 2 | 0.414 |
20 | 20 | 0.907 |
21 | 21 | 0.973 |
22 | 22 | 0.0639 |
23 | 23 | 0.00708 |
24 | 24 | 0.949 |
25 | 25 | 0.696 |
26 | 26 | 0.908 |
27 | 27 | 0.42 |
28 | 28 | 0.965 |
29 | 29 | 0.97 |
3 | 3 | 0.263 |
30 | 30 | 0.688 |
31 | 31 | 0.86 |
32 | 32 | 0.268 |
33 | 33 | 0.812 |
34 | 34 | 0.421 |
35 | 35 | 0.414 |
36 | 36 | 0.924 |
37 | 37 | 0.411 |
38 | 38 | 0.309 |
39 | 39 | 0.942 |
4 | 4 | 0.45 |
40 | 40 | 0.542 |
41 | 41 | 0.0763 |
42 | 42 | 0.315 |
43 | 43 | 0.119 |
44 | 44 | 0.335 |
45 | 45 | 0.244 |
46 | 46 | 0.16 |
47 | 47 | 0.707 |
48 | 48 | 0.946 |
49 | 49 | 0.0718 |
5 | 5 | 0.0835 |
50 | 50 | 0.997 |
51 | 51 | 0.539 |
52 | 52 | 0.308 |
53 | 53 | 0.315 |
54 | 54 | 0.33 |
55 | 55 | 0.0277 |
56 | 56 | 0.573 |
57 | 57 | 0.53 |
58 | 58 | 0.105 |
59 | 59 | 0.418 |
6 | 6 | 0.7 |
60 | 60 | 0.0568 |
61 | 61 | 0.746 |
62 | 62 | 0.0568 |
63 | 63 | 0.184 |
64 | 64 | 0.693 |
65 | 65 | 0.0871 |
66 | 66 | 0.681 |
67 | 67 | 0.308 |
68 | 68 | 0.837 |
69 | 69 | 0.669 |
7 | 7 | 0.486 |
70 | 70 | 0.0274 |
71 | 71 | 0.206 |
72 | 72 | 0.417 |
73 | 73 | 0.208 |
74 | 74 | 0.857 |
75 | 75 | 0.451 |
76 | 76 | 0.619 |
77 | 77 | 0.335 |
78 | 78 | 0.637 |
79 | 79 | 0.49 |
8 | 8 | 0.294 |
80 | 80 | 0.0657 |
81 | 81 | 0.439 |
82 | 82 | 0.156 |
83 | 83 | 0.748 |
84 | 84 | 0.725 |
85 | 85 | 0.0632 |
86 | 86 | 0.795 |
87 | 87 | 0.0465 |
88 | 88 | 0.799 |
89 | 89 | 0.198 |
9 | 9 | 0.0806 |
90 | 90 | 0.547 |
91 | 91 | 0.166 |
92 | 92 | 0.0321 |
93 | 93 | 0.235 |
94 | 94 | 0.146 |
95 | 95 | 0.747 |
96 | 96 | 0.0662 |
97 | 97 | 0.514 |
98 | 98 | 0.293 |
99 | 99 | 0.639 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13839
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)
FF: FANTOM5
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0200005 (iPS differentiation to neuron sample)
0200003 (iPS differentiation to neuron, control sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)