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{{f5samples
{{f5samples
|id=FF:10022-101D4
|DRA_sample_Accession=CAGE@SAMD00005501
|name=prostate, adult, pool1
|HumanCAGEScanFiles=NCig10021;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/prostate%252c%2520adult%252c%2520pool1.NCig10021.10022-101D4.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/prostate%252c%2520adult%252c%2520pool1.NCig10021.10022-101D4.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/prostate%252c%2520adult%252c%2520pool1.NCig10021.10022-101D4.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/prostate%252c%2520adult%252c%2520pool1.NCig10021.10022-101D4.hg19.GCTATA.pairs.bed.gz
|sample_id=10022
|accession_numbers=CAGE;DRX008713;DRR009585;DRZ001010;DRZ002395;DRZ012360;DRZ013745
|rna_tube_id=101D4
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0002367,UBERON:0000479,UBERON:0005156,UBERON:0004119,UBERON:0000062,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002530,UBERON:0010147,UBERON:0010317,UBERON:0003937,UBERON:0005399,UBERON:0003101,UBERON:0000079
|rna_box=101
|rna_position=D4
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Ambion
|rna_lot_number=0910061 -13
|rna_catalog_number=Cat:AM6000 Lot:0910061 -13
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=73,79,93 years old adult
|sample_tissue=prostate
|sample_donor(cell lot)=3 pool
|sample_sex=male
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs10628,LSID657,release008,COMPLETED
|profile_cagescan=NCig10021,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000079,UBERON:0000119,UBERON:0000161,UBERON:0000162,UBERON:0000163,UBERON:0000164,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000990,UBERON:0001007,UBERON:0001046,UBERON:0001062,UBERON:0001353,UBERON:0001555,UBERON:0002050,UBERON:0002367,UBERON:0002530,UBERON:0002532,UBERON:0003064,UBERON:0003101,UBERON:0003104,UBERON:0003353,UBERON:0003820,UBERON:0003929,UBERON:0003937,UBERON:0004111,UBERON:0004119,UBERON:0004120,UBERON:0004122,UBERON:0004185,UBERON:0004902,UBERON:0004921,UBERON:0005153,UBERON:0005156,UBERON:0005291,UBERON:0005399,UBERON:0005423,UBERON:0005911,UBERON:0006866,UBERON:0007023,UBERON:0007026,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010022
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.34!215.39!TCF21;;chr6:34524093..34524135,-!p1@SPDEF!2.11!127.55!SPDEF;;chr16:86544113..86544145,+!p1@FOXF1!1.90!95.76!FOXF1;;chr11:34642612..34642646,+!p1@EHF!1.90!77.55!EHF;;chr1:201979743..201979762,+!p1@ELF3!1.88!75.51!ELF3;;chr3:128212033..128212051,-!p1@GATA2!1.88!74.18!GATA2;;chr8:23540441..23540466,-!p1@NKX3-1!1.81!124.41!NKX3-1;;chr7:35293685..35293718,-!p1@TBX20!1.81!63.74!TBX20;;chr2:19558373..19558392,-!p1@OSR1!1.76!148.74!OSR1;;chr1:201979703..201979721,+!p2@ELF3!1.74!53.45!ELF3;;chr12:52437488..52437507,+!p2@NR4A1!1.73!52.90!NR4A1;;chr19:46801639..46801699,+!p1@HIF3A!1.69!47.65!HIF3A;;chr12:52445218..52445237,+!p1@NR4A1!1.67!544.19!NR4A1;;chr9:77112244..77112262,+!p1@RORB!1.67!51.65!RORB;;chr14:38064429..38064486,-!p1@FOXA1!1.63!41.29!FOXA1;;chr20:62680984..62680999,-!p1@SOX18!1.62!52.83!SOX18;;chr6:1312325..1312340,+!p1@FOXQ1!1.50!48.98!FOXQ1;;chr1:209979467..209979494,-!p1@IRF6!1.47!31.79!IRF6;;chr10:28034739..28034756,-!p1@MKX!1.46!27.94!MKX;;chr4:174451370..174451387,-!p1@HAND2!1.43!25.82!HAND2;;chrX:66763856..66763896,+!p1@AR!1.40!34.30!AR;;chr11:113930425..113930471,+!p1@ZBTB16!1.37!31.79!ZBTB16;;chrY:21906594..21906622,-!p1@KDM5D!1.37!22.61!KDM5D;;chr17:53342311..53342400,+!p1@HLF!1.36!25.04!HLF;;chr21:39870339..39870443,-!p1@ERG!1.35!21.35!ERG;;chr4:81118647..81118666,+!p1@PRDM8!1.34!27.79!PRDM8;;chr7:27239703..27239715,-!p1@HOXA13!1.33!20.25!HOXA13;;chr5:134369879..134369898,-!p2@PITX1!1.31!19.54!PITX1;;chr3:12330560..12330579,+!p1@PPARG!1.29!21.19!PPARG;;chr7:27224842..27224872,-!p1@HOXA11!1.29!18.60!HOXA11;;chr8:55370487..55370503,+!p1@SOX17!1.28!18.21!SOX17;;chr3:189507432..189507459,+!p1@TP63!1.28!18.21!TP63;;chr7:27239740..27239759,-!p2@HOXA13!1.28!18.05!HOXA13;;chr1:40105299..40105326,-!p1@HEYL!1.27!17.43!HEYL;;chr13:72441315..72441454,-!p1@DACH1!1.25!33.12!DACH1;;chr8:102504651..102504683,+!p1@GRHL2!1.25!16.88!GRHL2;;chr7:27192185..27192209,-!p1@HOXA3!1.25!16.72!HOXA3;;chr18:19749541..19749557,+!p1@GATA6!1.24!51.41!GATA6;;chr1:61548374..61548415,+!p4@NFIA!1.24!30.22!NFIA;;chr11:47400078..47400106,-!p1@SPI1!1.24!16.33!SPI1;;chr1:151804244..151804310,-!p1@RORC!1.23!16.01!RORC;;chr17:59529743..59529798,+!p1@TBX4!1.23!15.93!TBX4;;chr15:57511609..57511651,+!p2@TCF12!1.22!26.30!TCF12;;chr1:61547894..61547968,+!p2@NFIA!1.20!43.01!NFIA;;chr17:46806067..46806097,-!p1@HOXB13!1.20!14.91!HOXB13;;chr17:7492684..7492778,-!p2@SOX15!1.19!30.46!SOX15;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.19!14.60!PEG3;;chr7:44143925..44143970,+!p1@AEBP1!1.18!312.64!AEBP1;;chr16:79634624..79634642,-!p1@MAF!1.18!55.81!MAF;;chr4:174450089..174450153,-!p2@HAND2!1.18!14.13!HAND2;;chr12:115122005..115122016,-!p3@TBX3!1.17!16.33!TBX3;;chr9:114287433..114287513,+!p1@ZNF483!1.16!34.93!ZNF483;;chr6:1389789..1389821,+!p1@FOXF2!1.16!18.29!FOXF2;;chr1:170632285..170632309,+!p1@PRRX1!1.16!15.31!PRRX1;;chr7:27205136..27205164,-!p1@HOXA9!1.16!13.58!HOXA9;;chr11:34645791..34645836,+!p3@EHF!1.15!13.27!EHF;;chr7:27224795..27224840,-!p2@HOXA11!1.15!13.11!HOXA11;;chr1:164528410..164528428,+!p1@PBX1!1.14!95.45!PBX1;;chr8:99956662..99956684,+!p1@OSR2!1.14!19.70!OSR2;;chr2:145277882..145277967,-!p3@ZEB2!1.12!21.19!ZEB2;;chr3:126076242..126076257,-!p1@KLF15!1.12!15.15!KLF15;;chr17:46806035..46806059,-!p2@HOXB13!1.12!12.32!HOXB13;;chr14:38064590..38064606,-!p2@FOXA1!1.12!12.17!FOXA1;;chr6:19837592..19837621,+!p1@ID4!1.11!73.31!ID4;;chr1:61548069..61548102,+!p3@NFIA!1.11!28.65!NFIA;;chr20:61051039..61051057,-!p1@GATA5!1.11!11.93!GATA5;;chr5:92919100..92919135,+!p3@NR2F1!1.10!14.29!NR2F1;;chr8:10588010..10588030,-!p1@SOX7!1.10!11.62!SOX7;;chr12:115122318..115122331,-!p2@TBX3!1.10!11.62!TBX3;;chr5:50679228..50679288,+!p1@ISL1!1.09!11.38!ISL1;;chr17:80797886..80797906,-!p1@ZNF750!1.09!11.30!ZNF750;;chr3:128206762..128206781,-!p2@GATA2!1.08!69.47!GATA2;;chr11:113930291..113930339,+!p2@ZBTB16!1.08!17.97!ZBTB16;;chrX:66763914..66763933,+!p3@AR!1.08!11.07!AR;;chr7:63505799..63505904,+!p1@ZNF727!1.08!10.99!ZNF727;;chr12:115121962..115121987,-!p1@TBX3!1.07!90.90!TBX3;;chr5:92918919..92918942,+!p1@NR2F1!1.07!47.96!NR2F1;;chr20:51588873..51588953,+!p1@TSHZ2!1.07!14.44!TSHZ2;;chr16:85932760..85932775,+!p1@IRF8!1.07!10.83!IRF8;;chr11:113930401..113930422,+!p3@ZBTB16!1.07!10.75!ZBTB16;;chr22:38380543..38380569,-!p1@SOX10!1.07!10.68!SOX10;;chr5:134369905..134369972,-!p1@PITX1!1.06!16.17!PITX1;;chr2:68592406..68592424,+!p1@PLEK!1.06!10.44!PLEK;;chr11:34642656..34642667,+!p2@EHF!1.04!9.97!EHF;;chr16:79634595..79634620,-!p2@MAF!1.03!17.90!MAF;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.03!10.36!GLIS1;;chr11:12696579..12696611,+!p4@TEAD1!1.03!9.73!TEAD1;;chr10:8096631..8096660,+!p1@GATA3!1.01!11.15!GATA3;;chr5:71803177..71803255,-!p1@ZNF366!1.01!9.26!ZNF366;;chr7:27213893..27213954,-!p1@HOXA10!1.01!9.26!HOXA10;;chr3:114819124..114819200,-!p3@ZBTB20!1.00!21.51!ZBTB20;;chr16:79633894..79633954,-!p3@MAF!1.00!17.82!MAF;;chr7:15726296..15726315,-!p1@MEOX2!1.00!9.11!MEOX2;;ch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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000079;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001353;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002367;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005153;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005157;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005399;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005911
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0006603,UBERON:0009847,UBERON:0003353,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 42:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/prostate%252c%2520adult%252c%2520pool1.CNhs10628.10022-101D4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/prostate%252c%2520adult%252c%2520pool1.CNhs10628.10022-101D4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/prostate%252c%2520adult%252c%2520pool1.CNhs10628.10022-101D4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/prostate%252c%2520adult%252c%2520pool1.CNhs10628.10022-101D4.hg38.nobarcode.ctss.bed.gz
|id=FF:10022-101D4
|is_a=EFO:0002091;;FF:0010022
|is_obsolete=
|library_id=CNhs10628
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|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10022
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10022
|name=prostate, adult, pool1
|namespace=FANTOM5
|part_of=
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|profile_hcage=CNhs10628,LSID657,release008,COMPLETED
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|rna_box=101
|rna_catalog_number=Cat:AM6000 Lot:0910061 -13
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_lot_number=0910061 -13
|rna_od260/230=
|rna_od260/280=
|rna_position=D4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101D4
|rna_weight_ug=10
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Ambion
|sample_description=
|sample_dev_stage=73,79,93 years old adult
|sample_disease=normal
|sample_donor(cell lot)=3 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.01636449620233e-222!GO:0005737;cytoplasm;2.95065268987871e-163!GO:0043226;organelle;8.25203607054968e-140!GO:0043229;intracellular organelle;1.99296400461243e-139!GO:0043227;membrane-bound organelle;1.14166848610682e-130!GO:0043231;intracellular membrane-bound organelle;1.1639904047788e-130!GO:0005515;protein binding;3.29085988164047e-103!GO:0044444;cytoplasmic part;3.58099347359078e-102!GO:0044422;organelle part;1.06090864613992e-72!GO:0044446;intracellular organelle part;2.59213955302619e-71!GO:0032991;macromolecular complex;1.5243811332375e-57!GO:0044238;primary metabolic process;1.26332802333356e-52!GO:0043170;macromolecule metabolic process;3.71565737323355e-52!GO:0044237;cellular metabolic process;2.68269775016616e-50!GO:0005634;nucleus;2.8323211317649e-49!GO:0030529;ribonucleoprotein complex;1.34535196450257e-48!GO:0003723;RNA binding;9.24746559070118e-45!GO:0043233;organelle lumen;1.93750656823299e-42!GO:0031974;membrane-enclosed lumen;1.93750656823299e-42!GO:0016043;cellular component organization and biogenesis;2.4117769602879e-42!GO:0044428;nuclear part;1.02259654921533e-39!GO:0033036;macromolecule localization;1.28059636203718e-38!GO:0015031;protein transport;4.57651200056852e-37!GO:0019538;protein metabolic process;6.01440800249154e-36!GO:0008104;protein localization;6.01440800249154e-36!GO:0045184;establishment of protein localization;7.07182503788688e-36!GO:0005739;mitochondrion;4.81866484321242e-34!GO:0031090;organelle membrane;6.44674460095991e-32!GO:0044260;cellular macromolecule metabolic process;3.36321930936236e-31!GO:0010467;gene expression;3.89244452882329e-31!GO:0044267;cellular protein metabolic process;3.06253311320893e-30!GO:0005829;cytosol;1.97713196266142e-29!GO:0043234;protein complex;2.18362562722736e-29!GO:0043283;biopolymer metabolic process;1.78636761272957e-28!GO:0005840;ribosome;2.5286646067442e-28!GO:0046907;intracellular transport;1.11224140651712e-27!GO:0016071;mRNA metabolic process;1.69936518971189e-27!GO:0006412;translation;4.70644248042108e-27!GO:0031981;nuclear lumen;1.43748335152359e-25!GO:0008380;RNA splicing;2.81633796476317e-25!GO:0006396;RNA processing;3.31824780747062e-25!GO:0006886;intracellular protein transport;2.06527012337768e-24!GO:0003735;structural constituent of ribosome;3.21357445142537e-24!GO:0044429;mitochondrial part;1.75168780389521e-23!GO:0008134;transcription factor binding;4.32251105733515e-23!GO:0031967;organelle envelope;8.7221429793965e-23!GO:0031975;envelope;1.29344937184615e-22!GO:0006397;mRNA processing;2.34109993438038e-22!GO:0065003;macromolecular complex assembly;8.04425356048051e-22!GO:0033279;ribosomal subunit;1.10343172398058e-21!GO:0022607;cellular component assembly;1.22834209708739e-20!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.17293685731825e-20!GO:0051649;establishment of cellular localization;2.52717736912492e-18!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.84283483581022e-18!GO:0051641;cellular localization;4.2573135540239e-18!GO:0009059;macromolecule biosynthetic process;4.91361612826894e-18!GO:0048770;pigment granule;1.30178616592784e-17!GO:0042470;melanosome;1.30178616592784e-17!GO:0005681;spliceosome;2.04534299930897e-17!GO:0050794;regulation of cellular process;6.72284068670638e-17!GO:0005654;nucleoplasm;1.63087479487422e-16!GO:0050789;regulation of biological process;3.04456421604698e-16!GO:0016192;vesicle-mediated transport;4.38595433636513e-16!GO:0006996;organelle organization and biogenesis;4.87514835502715e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.80946598418394e-16!GO:0005783;endoplasmic reticulum;5.81122768372601e-16!GO:0044249;cellular biosynthetic process;7.15968369806664e-16!GO:0044445;cytosolic part;8.05418021551712e-16!GO:0016070;RNA metabolic process;8.75591157161684e-16!GO:0005740;mitochondrial envelope;1.20830740411143e-15!GO:0048523;negative regulation of cellular process;1.47053692190567e-15!GO:0009058;biosynthetic process;1.48118057380969e-15!GO:0043228;non-membrane-bound organelle;1.81492305511031e-15!GO:0043232;intracellular non-membrane-bound organelle;1.81492305511031e-15!GO:0031966;mitochondrial membrane;5.35968367924832e-15!GO:0006119;oxidative phosphorylation;5.67304402294112e-15!GO:0005794;Golgi apparatus;1.17849823126072e-14!GO:0044451;nucleoplasm part;1.28198521061202e-14!GO:0003712;transcription cofactor activity;1.32239943430189e-14!GO:0019866;organelle inner membrane;1.51411583400404e-14!GO:0022618;protein-RNA complex assembly;8.17133033855453e-14!GO:0012505;endomembrane system;1.13066724105675e-13!GO:0048193;Golgi vesicle transport;1.37840832255322e-13!GO:0005743;mitochondrial inner membrane;1.40671485747533e-13!GO:0048519;negative regulation of biological process;1.58060247774765e-13!GO:0006457;protein folding;1.78692637076855e-13!GO:0003676;nucleic acid binding;4.61384391060612e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.08822294047548e-12!GO:0006366;transcription from RNA polymerase II promoter;1.24794904381785e-12!GO:0006605;protein targeting;1.36774512548417e-12!GO:0006512;ubiquitin cycle;1.83831627991114e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.96990987995265e-12!GO:0015935;small ribosomal subunit;1.98089959247766e-12!GO:0019941;modification-dependent protein catabolic process;2.10918941382434e-12!GO:0043632;modification-dependent macromolecule catabolic process;2.10918941382434e-12!GO:0012501;programmed cell death;3.95045928758822e-12!GO:0044257;cellular protein catabolic process;4.43423152491566e-12!GO:0016564;transcription repressor activity;5.75032852617457e-12!GO:0065007;biological regulation;6.16243145887498e-12!GO:0006915;apoptosis;8.47477662528965e-12!GO:0031988;membrane-bound vesicle;8.67379622854046e-12!GO:0000166;nucleotide binding;1.15501742620256e-11!GO:0031982;vesicle;1.1591907329552e-11!GO:0008135;translation factor activity, nucleic acid binding;1.98532055693511e-11!GO:0008219;cell death;2.09198769658561e-11!GO:0016265;death;2.09198769658561e-11!GO:0016023;cytoplasmic membrane-bound vesicle;2.10618576149839e-11!GO:0005746;mitochondrial respiratory chain;2.17924655464567e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.35435489668927e-11!GO:0031410;cytoplasmic vesicle;3.1996234732504e-11!GO:0044265;cellular macromolecule catabolic process;4.13346418356445e-11!GO:0016874;ligase activity;5.83033267266733e-11!GO:0044455;mitochondrial membrane part;7.50637944681067e-11!GO:0043285;biopolymer catabolic process;8.7214674607746e-11!GO:0008092;cytoskeletal protein binding;1.42393898800017e-10!GO:0050136;NADH dehydrogenase (quinone) activity;1.55311086771456e-10!GO:0003954;NADH dehydrogenase activity;1.55311086771456e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.55311086771456e-10!GO:0016462;pyrophosphatase activity;1.55311086771456e-10!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.61521927962751e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.73746446393441e-10!GO:0000502;proteasome complex (sensu Eukaryota);2.0928925929887e-10!GO:0016817;hydrolase activity, acting on acid anhydrides;2.17484436136415e-10!GO:0015934;large ribosomal subunit;2.58163145797128e-10!GO:0006913;nucleocytoplasmic transport;2.64146175879434e-10!GO:0043412;biopolymer modification;2.70373585841563e-10!GO:0030036;actin cytoskeleton organization and biogenesis;2.72152971202319e-10!GO:0031980;mitochondrial lumen;2.9027911761719e-10!GO:0005759;mitochondrial matrix;2.9027911761719e-10!GO:0044432;endoplasmic reticulum part;3.27950601372652e-10!GO:0030163;protein catabolic process;4.30409567778544e-10!GO:0043687;post-translational protein modification;6.42871944163142e-10!GO:0017111;nucleoside-triphosphatase activity;7.23949659413263e-10!GO:0051169;nuclear transport;7.64032769512782e-10!GO:0006464;protein modification process;8.57806249898342e-10!GO:0005793;ER-Golgi intermediate compartment;1.2945562403083e-09!GO:0016604;nuclear body;2.14369965100969e-09!GO:0005730;nucleolus;2.30710469675669e-09!GO:0051082;unfolded protein binding;2.34172309651077e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.50207053869528e-09!GO:0003743;translation initiation factor activity;2.56338381755475e-09!GO:0030029;actin filament-based process;2.86924105795164e-09!GO:0008565;protein transporter activity;3.19312640638321e-09!GO:0006461;protein complex assembly;3.61302528846935e-09!GO:0044248;cellular catabolic process;6.9102018884814e-09!GO:0006446;regulation of translational initiation;8.27473697475987e-09!GO:0030964;NADH dehydrogenase complex (quinone);8.77127951495203e-09!GO:0045271;respiratory chain complex I;8.77127951495203e-09!GO:0005747;mitochondrial respiratory chain complex I;8.77127951495203e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;8.87339481562692e-09!GO:0000375;RNA splicing, via transesterification reactions;8.87339481562692e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.87339481562692e-09!GO:0042775;organelle ATP synthesis coupled electron transport;9.44548593560474e-09!GO:0042773;ATP synthesis coupled electron transport;9.44548593560474e-09!GO:0031324;negative regulation of cellular metabolic process;9.59122459231039e-09!GO:0016607;nuclear speck;1.09009554297619e-08!GO:0006413;translational initiation;1.11824521973495e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.36114395653822e-08!GO:0009057;macromolecule catabolic process;1.36865118194015e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.63469607940546e-08!GO:0016481;negative regulation of transcription;1.91038727717371e-08!GO:0003714;transcription corepressor activity;2.03803987720375e-08!GO:0009055;electron carrier activity;2.30610505835696e-08!GO:0009892;negative regulation of metabolic process;2.5163108230381e-08!GO:0008639;small protein conjugating enzyme activity;2.64632304189811e-08!GO:0017038;protein import;3.87286148497444e-08!GO:0004842;ubiquitin-protein ligase activity;4.83016548833553e-08!GO:0005635;nuclear envelope;5.22478775761435e-08!GO:0019787;small conjugating protein ligase activity;7.85883235704413e-08!GO:0031252;leading edge;8.49074260386727e-08!GO:0019222;regulation of metabolic process;1.14508600045873e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.50355779650133e-07!GO:0017076;purine nucleotide binding;1.56744564574263e-07!GO:0032553;ribonucleotide binding;1.94274404014198e-07!GO:0032555;purine ribonucleotide binding;1.94274404014198e-07!GO:0005768;endosome;2.74221266787203e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.78250781095669e-07!GO:0003713;transcription coactivator activity;2.78453540872442e-07!GO:0005761;mitochondrial ribosome;2.99049078169494e-07!GO:0000313;organellar ribosome;2.99049078169494e-07!GO:0051246;regulation of protein metabolic process;3.3150246768026e-07!GO:0007264;small GTPase mediated signal transduction;3.92618707738382e-07!GO:0031965;nuclear membrane;4.47215610553161e-07!GO:0003924;GTPase activity;4.50175451953259e-07!GO:0008361;regulation of cell size;4.65700937340409e-07!GO:0016563;transcription activator activity;4.65700937340409e-07!GO:0003779;actin binding;4.65700937340409e-07!GO:0016049;cell growth;5.59312464619128e-07!GO:0019899;enzyme binding;5.75420472179474e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.6714310850221e-07!GO:0009060;aerobic respiration;1.07577988521809e-06!GO:0006606;protein import into nucleus;1.3861949285614e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.56847877774844e-06!GO:0051170;nuclear import;1.58105912233042e-06!GO:0048522;positive regulation of cellular process;1.64756905689719e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.69573782317163e-06!GO:0006793;phosphorus metabolic process;1.74753597056146e-06!GO:0006796;phosphate metabolic process;1.74753597056146e-06!GO:0005789;endoplasmic reticulum membrane;1.77550401824688e-06!GO:0005773;vacuole;1.81991600522345e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.92020957862029e-06!GO:0045333;cellular respiration;2.04813281461098e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.27443332840341e-06!GO:0005525;GTP binding;2.30276777755236e-06!GO:0016881;acid-amino acid ligase activity;2.37918583652636e-06!GO:0006259;DNA metabolic process;2.61379948490995e-06!GO:0045892;negative regulation of transcription, DNA-dependent;2.83730877297967e-06!GO:0042981;regulation of apoptosis;2.94778419701996e-06!GO:0007243;protein kinase cascade;3.58654588653475e-06!GO:0043067;regulation of programmed cell death;3.81735620235508e-06!GO:0051186;cofactor metabolic process;3.9710667877082e-06!GO:0048475;coated membrane;4.2640703916452e-06!GO:0030117;membrane coat;4.2640703916452e-06!GO:0016044;membrane organization and biogenesis;4.83171260328502e-06!GO:0019829;cation-transporting ATPase activity;5.32533143393394e-06!GO:0043069;negative regulation of programmed cell death;5.80207545779374e-06!GO:0000323;lytic vacuole;8.61489497766438e-06!GO:0005764;lysosome;8.61489497766438e-06!GO:0005788;endoplasmic reticulum lumen;8.61489497766438e-06!GO:0030120;vesicle coat;8.61489497766438e-06!GO:0030662;coated vesicle membrane;8.61489497766438e-06!GO:0001558;regulation of cell growth;9.31974428726909e-06!GO:0043066;negative regulation of apoptosis;9.35333213216405e-06!GO:0048518;positive regulation of biological process;9.9380945204618e-06!GO:0042802;identical protein binding;1.08179518662122e-05!GO:0006916;anti-apoptosis;1.08427471060246e-05!GO:0006099;tricarboxylic acid cycle;1.08835023723625e-05!GO:0046356;acetyl-CoA catabolic process;1.08835023723625e-05!GO:0015986;ATP synthesis coupled proton transport;1.12408290832955e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.12408290832955e-05!GO:0016310;phosphorylation;1.16210384444533e-05!GO:0051789;response to protein stimulus;1.3971309707175e-05!GO:0006986;response to unfolded protein;1.3971309707175e-05!GO:0045786;negative regulation of progression through cell cycle;1.43490382860361e-05!GO:0044431;Golgi apparatus part;1.43490382860361e-05!GO:0032561;guanyl ribonucleotide binding;1.63382589012645e-05!GO:0019001;guanyl nucleotide binding;1.63382589012645e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;1.67649750482433e-05!GO:0030133;transport vesicle;2.6659150168039e-05!GO:0016568;chromatin modification;3.09521620000491e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.50960496732076e-05!GO:0044440;endosomal part;3.50960496732076e-05!GO:0010008;endosome membrane;3.50960496732076e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.27223763221843e-05!GO:0031323;regulation of cellular metabolic process;4.35553143247392e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.41190285354286e-05!GO:0016469;proton-transporting two-sector ATPase complex;4.6038984070244e-05!GO:0006323;DNA packaging;5.07060494796441e-05!GO:0005770;late endosome;5.13273616491482e-05!GO:0005798;Golgi-associated vesicle;5.37668570114384e-05!GO:0006084;acetyl-CoA metabolic process;5.48058911480081e-05!GO:0007010;cytoskeleton organization and biogenesis;5.74136129792285e-05!GO:0009109;coenzyme catabolic process;5.80591201721522e-05!GO:0006613;cotranslational protein targeting to membrane;6.17279609379282e-05!GO:0009056;catabolic process;6.30514319035708e-05!GO:0000245;spliceosome assembly;6.36358026058938e-05!GO:0006732;coenzyme metabolic process;6.90292408112409e-05!GO:0045893;positive regulation of transcription, DNA-dependent;7.15353522539435e-05!GO:0005839;proteasome core complex (sensu Eukaryota);7.22075587689338e-05!GO:0015078;hydrogen ion transmembrane transporter activity;7.33327383561281e-05!GO:0032446;protein modification by small protein conjugation;7.39278805367097e-05!GO:0044453;nuclear membrane part;7.4253600366951e-05!GO:0006693;prostaglandin metabolic process;8.53561244844903e-05!GO:0006692;prostanoid metabolic process;8.53561244844903e-05!GO:0043566;structure-specific DNA binding;8.76764241036404e-05!GO:0048471;perinuclear region of cytoplasm;8.84140396336471e-05!GO:0016567;protein ubiquitination;0.000110413153384263!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000124093480312284!GO:0000151;ubiquitin ligase complex;0.000130736672643755!GO:0009141;nucleoside triphosphate metabolic process;0.000142540085626583!GO:0051128;regulation of cellular component organization and biogenesis;0.000145779983239816!GO:0045941;positive regulation of transcription;0.000149977309705884!GO:0006950;response to stress;0.000153774953490094!GO:0051187;cofactor catabolic process;0.000157044447565378!GO:0045259;proton-transporting ATP synthase complex;0.000158678686561976!GO:0006350;transcription;0.000158889298128582!GO:0010468;regulation of gene expression;0.000164905165215696!GO:0009150;purine ribonucleotide metabolic process;0.00017290664293922!GO:0009199;ribonucleoside triphosphate metabolic process;0.000186637646960148!GO:0008026;ATP-dependent helicase activity;0.000186761363537789!GO:0005791;rough endoplasmic reticulum;0.000191374033808733!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000195620993139498!GO:0009144;purine nucleoside triphosphate metabolic process;0.000195620993139498!GO:0050657;nucleic acid transport;0.000215056582509139!GO:0051236;establishment of RNA localization;0.000215056582509139!GO:0050658;RNA transport;0.000215056582509139!GO:0009142;nucleoside triphosphate biosynthetic process;0.000216160901223913!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000216160901223913!GO:0006754;ATP biosynthetic process;0.000218775309441178!GO:0006753;nucleoside phosphate metabolic process;0.000218775309441178!GO:0015980;energy derivation by oxidation of organic compounds;0.000219718822235019!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000222691187040014!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000222691187040014!GO:0033673;negative regulation of kinase activity;0.000232419858524978!GO:0006469;negative regulation of protein kinase activity;0.000232419858524978!GO:0046034;ATP metabolic process;0.000236013617526079!GO:0040008;regulation of growth;0.000242554394747229!GO:0006403;RNA localization;0.00024758048677651!GO:0051427;hormone receptor binding;0.000250702600537767!GO:0030554;adenyl nucleotide binding;0.000250897527057029!GO:0030027;lamellipodium;0.00026987759767193!GO:0009259;ribonucleotide metabolic process;0.000273290469625818!GO:0006163;purine nucleotide metabolic process;0.000273290469625818!GO:0032559;adenyl ribonucleotide binding;0.000277229387696786!GO:0005524;ATP binding;0.000296322124264833!GO:0007265;Ras protein signal transduction;0.000322132843389719!GO:0004386;helicase activity;0.000326092227036909!GO:0016887;ATPase activity;0.000328755668467722!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00036311702102009!GO:0003702;RNA polymerase II transcription factor activity;0.00036828263302632!GO:0009152;purine ribonucleotide biosynthetic process;0.000373245262424914!GO:0042254;ribosome biogenesis and assembly;0.000376937087301281!GO:0030532;small nuclear ribonucleoprotein complex;0.000379746124393518!GO:0005643;nuclear pore;0.000396791310428284!GO:0004298;threonine endopeptidase activity;0.000399189599716493!GO:0007242;intracellular signaling cascade;0.000417192046280258!GO:0030867;rough endoplasmic reticulum membrane;0.000431843349920831!GO:0042623;ATPase activity, coupled;0.000438011555459877!GO:0016197;endosome transport;0.000449877815525749!GO:0035257;nuclear hormone receptor binding;0.000476582720425343!GO:0016491;oxidoreductase activity;0.000496772502671275!GO:0019843;rRNA binding;0.000513103710606753!GO:0048468;cell development;0.000546532037010361!GO:0005667;transcription factor complex;0.000560611795501306!GO:0009966;regulation of signal transduction;0.000590546489877746!GO:0006897;endocytosis;0.000615008706150118!GO:0010324;membrane invagination;0.000615008706150118!GO:0006164;purine nucleotide biosynthetic process;0.000620847311927027!GO:0005769;early endosome;0.000628842479024643!GO:0003724;RNA helicase activity;0.000633357280151868!GO:0009260;ribonucleotide biosynthetic process;0.000698010552069726!GO:0051348;negative regulation of transferase activity;0.00072401665238979!GO:0003697;single-stranded DNA binding;0.000730716583119703!GO:0001726;ruffle;0.000732710943955883!GO:0008286;insulin receptor signaling pathway;0.000784724235104684!GO:0008154;actin polymerization and/or depolymerization;0.000808863032504038!GO:0001666;response to hypoxia;0.000862019211398174!GO:0000139;Golgi membrane;0.000862019211398174!GO:0005083;small GTPase regulator activity;0.000940766657114946!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00104640174768157!GO:0005912;adherens junction;0.00112757281619928!GO:0008250;oligosaccharyl transferase complex;0.00120059485427068!GO:0006402;mRNA catabolic process;0.00123361797520997!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00125468683832495!GO:0015629;actin cytoskeleton;0.00134949452315651!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00134972730344543!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.0013691503314255!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00141641399967814!GO:0043021;ribonucleoprotein binding;0.00143905985607808!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00149829026037371!GO:0004812;aminoacyl-tRNA ligase activity;0.00149829026037371!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00149829026037371!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00152070140745588!GO:0032774;RNA biosynthetic process;0.0015364191277801!GO:0065002;intracellular protein transport across a membrane;0.0015364191277801!GO:0006351;transcription, DNA-dependent;0.00155191555789949!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00161121768987464!GO:0033116;ER-Golgi intermediate compartment membrane;0.00168364370508772!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00170897973964398!GO:0006612;protein targeting to membrane;0.00171886796866539!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0017694327418291!GO:0030041;actin filament polymerization;0.0017694327418291!GO:0045045;secretory pathway;0.00182280191153068!GO:0006979;response to oxidative stress;0.00182808223487508!GO:0006091;generation of precursor metabolites and energy;0.00184711244957562!GO:0006892;post-Golgi vesicle-mediated transport;0.0018981852455938!GO:0051287;NAD binding;0.00192373611229382!GO:0005741;mitochondrial outer membrane;0.0019328288228206!GO:0051726;regulation of cell cycle;0.00195167447243694!GO:0000074;regulation of progression through cell cycle;0.00195167447243694!GO:0043623;cellular protein complex assembly;0.00212054613320714!GO:0007049;cell cycle;0.00216175928306142!GO:0065009;regulation of a molecular function;0.00246493272948591!GO:0005905;coated pit;0.00248593161033339!GO:0035258;steroid hormone receptor binding;0.00257539608631614!GO:0008654;phospholipid biosynthetic process;0.00257723533758842!GO:0006891;intra-Golgi vesicle-mediated transport;0.00258713163044134!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00258713163044134!GO:0051276;chromosome organization and biogenesis;0.00264803796423166!GO:0007167;enzyme linked receptor protein signaling pathway;0.00268061583132079!GO:0045449;regulation of transcription;0.00268149074740794!GO:0051028;mRNA transport;0.00279284338096936!GO:0001516;prostaglandin biosynthetic process;0.00279284338096936!GO:0046457;prostanoid biosynthetic process;0.00279284338096936!GO:0003690;double-stranded DNA binding;0.00294189419909529!GO:0043038;amino acid activation;0.00295383476627734!GO:0006418;tRNA aminoacylation for protein translation;0.00295383476627734!GO:0043039;tRNA aminoacylation;0.00295383476627734!GO:0005885;Arp2/3 protein complex;0.00301716427769714!GO:0051920;peroxiredoxin activity;0.00304287577603762!GO:0016859;cis-trans isomerase activity;0.00310896154290598!GO:0019867;outer membrane;0.00312972651870693!GO:0031968;organelle outer membrane;0.00322563969209458!GO:0004576;oligosaccharyl transferase activity;0.0032363493753529!GO:0032940;secretion by cell;0.0036003928090215!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0036003928090215!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0036003928090215!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0036003928090215!GO:0008287;protein serine/threonine phosphatase complex;0.00363069016704723!GO:0006333;chromatin assembly or disassembly;0.00396558832655735!GO:0046930;pore complex;0.00396558832655735!GO:0030118;clathrin coat;0.00409017461807563!GO:0030518;steroid hormone receptor signaling pathway;0.00411069957316373!GO:0045792;negative regulation of cell size;0.00434448452228648!GO:0051087;chaperone binding;0.00442843429127301!GO:0043488;regulation of mRNA stability;0.00444422964946049!GO:0043487;regulation of RNA stability;0.00444422964946049!GO:0008186;RNA-dependent ATPase activity;0.00460501789823338!GO:0030308;negative regulation of cell growth;0.00536559835615711!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00547069807569482!GO:0001725;stress fiber;0.00562558727730161!GO:0032432;actin filament bundle;0.00562558727730161!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00594362271133232!GO:0004667;prostaglandin-D synthase activity;0.00594362271133232!GO:0050802;circadian sleep/wake cycle, sleep;0.00594362271133232!GO:0022410;circadian sleep/wake cycle process;0.00594362271133232!GO:0042749;regulation of circadian sleep/wake cycle;0.00594362271133232!GO:0030100;regulation of endocytosis;0.00594362271133232!GO:0051168;nuclear export;0.00594992724237622!GO:0006607;NLS-bearing substrate import into nucleus;0.00603794310800253!GO:0030134;ER to Golgi transport vesicle;0.00603794310800253!GO:0019904;protein domain specific binding;0.00627331315672757!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00643417384812857!GO:0000902;cell morphogenesis;0.00645978735267748!GO:0032989;cellular structure morphogenesis;0.00645978735267748!GO:0005762;mitochondrial large ribosomal subunit;0.00689722258951498!GO:0000315;organellar large ribosomal subunit;0.00689722258951498!GO:0017166;vinculin binding;0.00689722258951498!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00713933011355342!GO:0008047;enzyme activator activity;0.00739997203187884!GO:0003729;mRNA binding;0.00759274403660651!GO:0046983;protein dimerization activity;0.00820006375901078!GO:0051188;cofactor biosynthetic process;0.00907989699448472!GO:0031072;heat shock protein binding;0.00910360118415523!GO:0030127;COPII vesicle coat;0.00910360118415523!GO:0012507;ER to Golgi transport vesicle membrane;0.00910360118415523!GO:0030695;GTPase regulator activity;0.00910360118415523!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00925564948259219!GO:0051270;regulation of cell motility;0.00962689546744367!GO:0048500;signal recognition particle;0.00963904618248216!GO:0006355;regulation of transcription, DNA-dependent;0.0097525439159135!GO:0012506;vesicle membrane;0.00977602730733589!GO:0016072;rRNA metabolic process;0.0098221112415418!GO:0016363;nuclear matrix;0.00991023026891133!GO:0030663;COPI coated vesicle membrane;0.0101472616605771!GO:0030126;COPI vesicle coat;0.0101472616605771!GO:0006364;rRNA processing;0.0105468825557136!GO:0051252;regulation of RNA metabolic process;0.0110385030456614!GO:0045454;cell redox homeostasis;0.0110668838178396!GO:0030659;cytoplasmic vesicle membrane;0.0114133545581857!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0115547530001161!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0115547530001161!GO:0033043;regulation of organelle organization and biogenesis;0.0115547530001161!GO:0007005;mitochondrion organization and biogenesis;0.0115776373172763!GO:0018196;peptidyl-asparagine modification;0.0116322674741807!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0116322674741807!GO:0004004;ATP-dependent RNA helicase activity;0.0116752415949343!GO:0043407;negative regulation of MAP kinase activity;0.011748878075721!GO:0045926;negative regulation of growth;0.0120074779976532!GO:0006650;glycerophospholipid metabolic process;0.0120074779976532!GO:0006401;RNA catabolic process;0.0120074779976532!GO:0030658;transport vesicle membrane;0.0137154061702569!GO:0030241;muscle thick filament assembly;0.0138019344749317!GO:0031034;myosin filament assembly;0.0138019344749317!GO:0031033;myosin filament assembly or disassembly;0.0138019344749317!GO:0048739;cardiac muscle fiber development;0.0138019344749317!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0140485877449!GO:0009719;response to endogenous stimulus;0.0142091626343858!GO:0030132;clathrin coat of coated pit;0.0143209611654992!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0143277659450466!GO:0043034;costamere;0.0147986318370372!GO:0009967;positive regulation of signal transduction;0.0148714369341718!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0152270711101814!GO:0030521;androgen receptor signaling pathway;0.0156439907401993!GO:0031902;late endosome membrane;0.0165019592938041!GO:0005869;dynactin complex;0.0166000886842546!GO:0022890;inorganic cation transmembrane transporter activity;0.017906823820758!GO:0008283;cell proliferation;0.017981963297372!GO:0005100;Rho GTPase activator activity;0.0180353303483021!GO:0045098;type III intermediate filament;0.0182329344129257!GO:0043086;negative regulation of catalytic activity;0.0183095182330072!GO:0006974;response to DNA damage stimulus;0.0185548660995553!GO:0030137;COPI-coated vesicle;0.0185548660995553!GO:0031589;cell-substrate adhesion;0.0186762655039131!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0186762655039131!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0186775542223153!GO:0051674;localization of cell;0.0187402868176127!GO:0006928;cell motility;0.0187402868176127!GO:0016584;nucleosome positioning;0.0189476375010895!GO:0009893;positive regulation of metabolic process;0.0192438693229118!GO:0031349;positive regulation of defense response;0.019296453849616!GO:0050729;positive regulation of inflammatory response;0.019296453849616!GO:0006414;translational elongation;0.0193771023363235!GO:0044433;cytoplasmic vesicle part;0.0198410984152093!GO:0005048;signal sequence binding;0.0200739096964633!GO:0005813;centrosome;0.0200739096964633!GO:0004860;protein kinase inhibitor activity;0.0200739096964633!GO:0030119;AP-type membrane coat adaptor complex;0.0200739096964633!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0200739096964633!GO:0045047;protein targeting to ER;0.0200739096964633!GO:0007266;Rho protein signal transduction;0.0205598377197789!GO:0005096;GTPase activator activity;0.0207184770821029!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.0207364895027967!GO:0006376;mRNA splice site selection;0.0217961661696671!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0217961661696671!GO:0006752;group transfer coenzyme metabolic process;0.0220441967778773!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0228270145544411!GO:0040011;locomotion;0.0229650469557705!GO:0051101;regulation of DNA binding;0.0234380594993079!GO:0040012;regulation of locomotion;0.0237833898128807!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0240899029456085!GO:0035035;histone acetyltransferase binding;0.0242599662682763!GO:0005159;insulin-like growth factor receptor binding;0.0244568860122906!GO:0007160;cell-matrix adhesion;0.0247078558305813!GO:0009108;coenzyme biosynthetic process;0.0248772821870651!GO:0030522;intracellular receptor-mediated signaling pathway;0.0250490793309847!GO:0031901;early endosome membrane;0.0252315491342577!GO:0065004;protein-DNA complex assembly;0.0253294172596612!GO:0030131;clathrin adaptor complex;0.025382483572092!GO:0043681;protein import into mitochondrion;0.0254772428935002!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0254772428935002!GO:0008064;regulation of actin polymerization and/or depolymerization;0.025710306596544!GO:0016853;isomerase activity;0.025710306596544!GO:0050811;GABA receptor binding;0.0257374448536528!GO:0008139;nuclear localization sequence binding;0.0265546441661789!GO:0005774;vacuolar membrane;0.0271752053118893!GO:0043065;positive regulation of apoptosis;0.0272491809383023!GO:0005099;Ras GTPase activator activity;0.0272813960455193!GO:0044420;extracellular matrix part;0.0279441284643133!GO:0004364;glutathione transferase activity;0.0283521267838213!GO:0046474;glycerophospholipid biosynthetic process;0.0283580282352271!GO:0031625;ubiquitin protein ligase binding;0.0283580282352271!GO:0006509;membrane protein ectodomain proteolysis;0.0288953427485342!GO:0033619;membrane protein proteolysis;0.0288953427485342!GO:0008097;5S rRNA binding;0.0293746207350166!GO:0048487;beta-tubulin binding;0.0308906209327253!GO:0050662;coenzyme binding;0.0312748174558522!GO:0008312;7S RNA binding;0.0312748174558522!GO:0007050;cell cycle arrest;0.0320918191454529!GO:0005938;cell cortex;0.0325478360705951!GO:0000314;organellar small ribosomal subunit;0.0329480063417732!GO:0005763;mitochondrial small ribosomal subunit;0.0329480063417732!GO:0004177;aminopeptidase activity;0.0336227206033989!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.03417674799921!GO:0006611;protein export from nucleus;0.0342483798651176!GO:0051271;negative regulation of cell motility;0.0343750770124025!GO:0005862;muscle thin filament tropomyosin;0.0343874306201136!GO:0030660;Golgi-associated vesicle membrane;0.0349199109636213!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0353810290222247!GO:0043068;positive regulation of programmed cell death;0.0358641554522894!GO:0008147;structural constituent of bone;0.036348826278649!GO:0030832;regulation of actin filament length;0.036348826278649!GO:0001944;vasculature development;0.0367236375324007!GO:0031529;ruffle organization and biogenesis;0.0369224992555569!GO:0014706;striated muscle development;0.0369744333646994!GO:0060090;molecular adaptor activity;0.0375820117900777!GO:0003746;translation elongation factor activity;0.0376701490685697!GO:0007517;muscle development;0.0381975123677902!GO:0000059;protein import into nucleus, docking;0.0383922999630645!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0383922999630645!GO:0008601;protein phosphatase type 2A regulator activity;0.0384899593074151!GO:0051098;regulation of binding;0.0384899593074151!GO:0015631;tubulin binding;0.038625850943398!GO:0001568;blood vessel development;0.0390444818188167!GO:0051049;regulation of transport;0.0390444818188167!GO:0051235;maintenance of localization;0.0400616848490698!GO:0030384;phosphoinositide metabolic process;0.0400616848490698!GO:0030833;regulation of actin filament polymerization;0.0402820067610844!GO:0032535;regulation of cellular component size;0.0404681710591726!GO:0006984;ER-nuclear signaling pathway;0.0404681710591726!GO:0004722;protein serine/threonine phosphatase activity;0.0404681710591726!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0404681710591726!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0411725475391488!GO:0043022;ribosome binding;0.0427473093813649!GO:0045661;regulation of myoblast differentiation;0.0427483322351358!GO:0006595;polyamine metabolic process;0.042895591744435!GO:0001837;epithelial to mesenchymal transition;0.0433966386812926!GO:0006399;tRNA metabolic process;0.0433966386812926!GO:0005815;microtubule organizing center;0.0458775654290222!GO:0005581;collagen;0.0487040226856266!GO:0017091;AU-rich element binding;0.0493167598825431!GO:0050779;RNA destabilization;0.0493167598825431!GO:0000289;poly(A) tail shortening;0.0493167598825431!GO:0005832;chaperonin-containing T-complex;0.0499262286012116!GO:0004721;phosphoprotein phosphatase activity;0.0499915323851313
|sample_id=10022
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=prostate
|top_motifs=SRF:2.66802118993;TFAP2{A,C}:2.31104155357;MAZ:2.29114067608;SP1:2.15807141723;FOX{D1,D2}:2.0662299983;TBP:2.02956867083;PATZ1:2.00613335411;NFATC1..3:1.84958683939;FOXO1,3,4:1.84493314939;MYBL2:1.75531464158;PRDM1:1.71974968328;GTF2I:1.70384050581;FOX{I1,J2}:1.69705381792;TFCP2:1.68945036707;TLX1..3_NFIC{dimer}:1.65359880794;HIC1:1.64964428752;TFAP4:1.60330009795;MED-1{core}:1.55666998113;MZF1:1.55171628568;EP300:1.55128593545;TFAP2B:1.47583338242;MTF1:1.44503343976;PAX5:1.44487402132;SPZ1:1.43455780986;ZNF238:1.42070496903;XCPE1{core}:1.3877942046;HBP1_HMGB_SSRP1_UBTF:1.29656056908;GFI1B:1.26285147242;STAT1,3:1.25869101305;MYFfamily:1.25823090022;MTE{core}:1.23864587361;MEF2{A,B,C,D}:1.22148639942;AR:1.21176957719;HOX{A6,A7,B6,B7}:1.16090623708;SOX5:1.14637075962;GTF2A1,2:1.14474040662;IKZF1:1.09817204825;RREB1:1.08779849983;EGR1..3:1.08584312871;HMX1:1.06225346808;GATA4:1.05005599976;HSF1,2:1.04244403118;FOXA2:1.03982260113;RBPJ:1.02954332284;SNAI1..3:1.00557651548;CDC5L:1.00151166226;NHLH1,2:0.994356347645;FOXQ1:0.975280774544;T:0.965101922428;IRF7:0.954527338176;POU6F1:0.941070595058;ATF6:0.939364538734;SMAD1..7,9:0.938428182641;NKX3-2:0.931451920847;ZEB1:0.892250834971;HAND1,2:0.888006884554;NR3C1:0.866491340864;TEAD1:0.854086985239;TGIF1:0.803700264538;ZNF148:0.736098886312;BREu{core}:0.727958077053;ZNF423:0.715762992399;TEF:0.700457531174;STAT2,4,6:0.693801192709;PBX1:0.686556434863;TBX4,5:0.679887365742;GZF1:0.625766177973;KLF4:0.611722621826;GATA6:0.592704186209;TLX2:0.591694379734;NANOG:0.568978986597;ATF2:0.560156414949;GCM1,2:0.559419085669;NR1H4:0.55032536534;XBP1:0.536003434175;POU5F1:0.533172851518;HNF1A:0.524694906333;IRF1,2:0.511013570755;TP53:0.508506072776;EBF1:0.49633429299;FOXN1:0.474076088848;ZIC1..3:0.471538315372;ZFP161:0.457685813773;SOX2:0.44011525988;MAFB:0.414989000713;ETS1,2:0.346176732463;ESR1:0.339623637588;FOX{F1,F2,J1}:0.329663994163;IKZF2:0.329380290394;FOXM1:0.316445688794;PAX1,9:0.310316456096;RFX2..5_RFXANK_RFXAP:0.304656754273;LMO2:0.292298484807;REST:0.278149720243;ATF4:0.269434521105;POU2F1..3:0.267313751608;PAX6:0.259030715774;POU3F1..4:0.248716447545;JUN:0.238986612304;VSX1,2:0.228813665138;SPIB:0.195997076573;ESRRA:0.184329946404;SREBF1,2:0.145341808973;NFIX:0.090745587588;FOXL1:0.0841049358483;MYOD1:0.0663322822202;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0628717949544;HNF4A_NR2F1,2:0.0502945371278;ZNF143:0.0216761850449;NR5A1,2:0.018420329304;SOX17:0.00615328659025;ARID5B:-0.00360311229616;SPI1:-0.0355826644488;GFI1:-0.0423317281945;ADNP_IRX_SIX_ZHX:-0.0456016671581;DBP:-0.0509677369797;GLI1..3:-0.10161302045;CRX:-0.107131487087;BPTF:-0.121577523458;FOXP3:-0.128055407751;PDX1:-0.129422736949;RFX1:-0.143390180006;NFIL3:-0.145360947862;AHR_ARNT_ARNT2:-0.146058643627;ALX1:-0.154183800069;SOX{8,9,10}:-0.177436924751;NKX2-1,4:-0.181232588439;ELF1,2,4:-0.18885117662;HMGA1,2:-0.194716519293;ZNF384:-0.199483818705;NKX6-1,2:-0.209850438443;ZBTB6:-0.235921186731;CUX2:-0.2441378693;NKX2-3_NKX2-5:-0.254479021974;PRRX1,2:-0.256245037861;NRF1:-0.28041697144;HES1:-0.284748121027;FOSL2:-0.29504414146;RXR{A,B,G}:-0.334955065808;NFKB1_REL_RELA:-0.350542761492;FOXP1:-0.355673253193;CDX1,2,4:-0.379485381735;HLF:-0.388430217341;LEF1_TCF7_TCF7L1,2:-0.392548566609;NFY{A,B,C}:-0.393557705485;ATF5_CREB3:-0.404469035134;UFEwm:-0.408668976893;CEBPA,B_DDIT3:-0.412075640339;RUNX1..3:-0.429608360803;PAX3,7:-0.431912332866;TFDP1:-0.438814791638;RORA:-0.439900370505;HOX{A4,D4}:-0.477604073953;DMAP1_NCOR{1,2}_SMARC:-0.506506606208;NFE2:-0.5093517994;LHX3,4:-0.534304600581;NR6A1:-0.541696117793;bHLH_family:-0.544178856598;HOXA9_MEIS1:-0.547596096718;TAL1_TCF{3,4,12}:-0.55931640211;FOXD3:-0.57032905901;PITX1..3:-0.589038919965;NFE2L2:-0.611011735074;FOS_FOS{B,L1}_JUN{B,D}:-0.639986647371;NKX2-2,8:-0.645153144765;ALX4:-0.647429102843;BACH2:-0.694687744096;RXRA_VDR{dimer}:-0.701502791258;HIF1A:-0.708638239773;HOX{A5,B5}:-0.721780418624;CREB1:-0.738486641135;E2F1..5:-0.7958187719;AIRE:-0.802104935377;TOPORS:-0.802121440136;PAX2:-0.890365162291;NANOG{mouse}:-0.900056830485;NFE2L1:-0.905164805168;ELK1,4_GABP{A,B1}:-1.03505454101;YY1:-1.05890682171;EVI1:-1.0862686888;OCT4_SOX2{dimer}:-1.12299912607;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.20773223352;EN1,2:-1.22151825629;POU1F1:-1.23255020505;ONECUT1,2:-1.23383153887;NKX3-1:-1.26358796605;ZBTB16:-1.2852948951;MYB:-1.40548648622;PPARG:-1.48970499538;STAT5{A,B}:-1.7440868744;PAX8:-2.22516411315;PAX4:-2.32795792776
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10022-101D4;search_select_hide=table117:FF:10022-101D4
}}
}}

Latest revision as of 12:14, 3 June 2020

Name:prostate, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10628
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueprostate
dev stage73,79,93 years old adult
sexmale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyAmbion
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number0910061 -13
catalog numberCat:AM6000 Lot:0910061 -13
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005501
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10628 CAGE DRX008713 DRR009585
Accession ID Hg19

Library idBAMCTSS
CNhs10628 DRZ001010 DRZ002395
Accession ID Hg38

Library idBAMCTSS
CNhs10628 DRZ012360 DRZ013745
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload
HumanCAGEScan Download raw sequence, BAM & CTSS

Library id3prime-FASTQ5prime-FASTQBAMCTSS
NCig10021downloaddownloaddownloaddownload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.115
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.312
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.0328
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.305
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.119
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0424
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.191
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.0328
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0018
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.168
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0.0328
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.119
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0305
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.222
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.044
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.19
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.0328
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.0633
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70.0918
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.0328
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.527
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0328
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0.685
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.261
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.19
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.131
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0.0226
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0328
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-8.648061e-4
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.575
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.119
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0918
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.144
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0328
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.27
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0328
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.416
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0.0633
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.536
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.144
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0328
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0633
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.0328
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10628

Jaspar motifP-value
MA0002.20.0113
MA0003.10.222
MA0004.10.0941
MA0006.10.547
MA0007.10.484
MA0009.10.51
MA0014.10.787
MA0017.10.238
MA0018.20.778
MA0019.10.0576
MA0024.10.227
MA0025.10.362
MA0027.10.706
MA0028.10.0035
MA0029.10.151
MA0030.14.84061e-7
MA0031.10.00629
MA0035.20.866
MA0038.10.553
MA0039.20.471
MA0040.10.133
MA0041.10.0517
MA0042.10.116
MA0043.10.424
MA0046.13.68883e-4
MA0047.24.50346e-4
MA0048.10.105
MA0050.10.0554
MA0051.10.285
MA0052.10.0018
MA0055.10.012
MA0057.10.978
MA0058.10.0541
MA0059.10.00161
MA0060.10.569
MA0061.10.00966
MA0062.22.19853e-4
MA0065.20.022
MA0066.10.00564
MA0067.10.153
MA0068.10.00223
MA0069.10.713
MA0070.10.533
MA0071.10.0607
MA0072.10.264
MA0073.10.654
MA0074.10.904
MA0076.10.00596
MA0077.10.937
MA0078.10.138
MA0079.20.176
MA0080.20.354
MA0081.10.348
MA0083.13.59605e-5
MA0084.10.907
MA0087.10.221
MA0088.10.0722
MA0090.10.114
MA0091.10.806
MA0092.10.926
MA0093.10.111
MA0099.24.07904e-10
MA0100.10.181
MA0101.10.0399
MA0102.20.729
MA0103.10.593
MA0104.20.00279
MA0105.11.17025e-7
MA0106.10.305
MA0107.10.0535
MA0108.21.45947e-18
MA0111.10.387
MA0112.20.0179
MA0113.10.906
MA0114.10.0495
MA0115.10.0192
MA0116.11.28087e-4
MA0117.10.401
MA0119.10.226
MA0122.10.407
MA0124.10.388
MA0125.10.267
MA0131.10.488
MA0135.10.253
MA0136.10.0404
MA0137.20.0162
MA0138.20.307
MA0139.10.346
MA0140.10.357
MA0141.10.00944
MA0142.10.154
MA0143.10.673
MA0144.10.47
MA0145.10.293
MA0146.10.388
MA0147.18.46635e-4
MA0148.10.00364
MA0149.10.0199
MA0150.10.0012
MA0152.10.656
MA0153.18.20404e-4
MA0154.10.0616
MA0155.10.814
MA0156.10.0193
MA0157.10.284
MA0159.10.0697
MA0160.10.0508
MA0162.10.512
MA0163.12.57426e-10
MA0164.10.333
MA0258.10.0159
MA0259.10.0656



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10628

Novel motifP-value
10.0122
100.0271
1000.111
1010.908
1020.596
1030.15
1040.529
1050.638
1060.413
1070.866
1080.525
1090.0206
110.035
1100.0683
1110.00237
1120.681
1130.461
1140.00355
1150.925
1160.65
1170.0139
1180.0661
1190.254
120.73
1200.0442
1210.489
1220.72
1230.0104
1240.707
1250.0791
1260.789
1270.572
1280.932
1290.443
130.062
1300.375
1310.161
1320.235
1330.135
1340.121
1350.239
1360.401
1370.34
1380.611
1390.0724
140.984
1400.169
1410.28
1420.71
1430.0175
1440.999
1450.405
1460.881
1470.641
1480.0664
1490.874
150.0369
1500.485
1510.729
1520.714
1530.636
1540.682
1550.202
1560.463
1570.947
1580.331
1590.738
160.0945
1600.649
1610.287
1620.615
1630.929
1640.0187
1650.782
1660.559
1670.0225
1680.555
1690.221
170.395
180.0307
190.856
20.186
200.0809
210.139
220.93
230.873
240.584
250.329
260.0134
270.958
280.689
290.0101
30.148
300.0617
310.87
320.222
330.15
340.571
350.168
360.0131
370.126
380.566
390.434
40.36
400.0699
410.0464
420.333
430.128
440.276
450.352
460.0575
470.0573
480.153
490.0625
50.389
500.63
510.623
520.421
530.97
540.879
550.406
560.808
570.105
580.569
590.647
60.461
600.696
610.254
620.232
630.475
640.169
650.573
660.117
670.321
680.851
690.478
70.234
700.0489
710.0334
720.977
730.113
740.274
750.00685
760.043
770.738
780.114
790.25
80.0917
800.702
810.335
820.399
830.454
840.824
850.415
860.672
870.128
880.906
890.528
90.523
900.0206
910.703
920.642
930.0624
940.0269
950.0114
960.666
970.897
980.0997
990.468



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10628


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002367 (prostate gland)
0000479 (tissue)
0005156 (reproductive structure)
0004119 (endoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002530 (gland)
0010147 (male accessory sex gland)
0010317 (germ layer / neural crest derived structure)
0003937 (sex gland)
0005399 (male reproductive gland)
0003101 (male organism)
0000079 (male reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010022 (human prostate - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0009847 (prostate field)
UBERON:0003353 (epithelium of hindgut)
UBERON:0010316 (germ layer / neural crest)

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