FF:11751-123G5: Difference between revisions

Latest revision as of 18:17, 4 June 2020

Name:	mesenchymal precursor cell - bone marrow, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs12367
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	bone marrow
dev stage	NA
sex	NA
age	NA
cell type	mesenchymal precursor cell
cell line	NA
company	NA
collaboration	Claudio Schneider LNCIB
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005728

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12367		CAGE		DRX008549		DRR009421

Accession ID Hg19

Library id		BAM		CTSS
CNhs12367		DRZ000846		DRZ002231

Accession ID Hg38

Library id		BAM		CTSS
CNhs12367		DRZ012196		DRZ013581

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0801
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.261
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.244
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.11
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0983
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0975
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.679
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0347
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.164
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.177
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.532
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0585
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.302
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0887
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.435
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	1.152
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.124
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.177
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.4
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.496
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.441
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0975
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.514
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0975
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	1.024
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12367

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.774
MA0003.1	MA0003.1	0.54
MA0004.1	MA0004.1	0.645
MA0006.1	MA0006.1	0.986
MA0007.1	MA0007.1	0.703
MA0009.1	MA0009.1	0.13
MA0014.1	MA0014.1	0.955
MA0017.1	MA0017.1	0.58
MA0018.2	MA0018.2	0.0048
MA0019.1	MA0019.1	0.308
MA0024.1	MA0024.1	8.95678e-5
MA0025.1	MA0025.1	5.01303e-4
MA0027.1	MA0027.1	0.779
MA0028.1	MA0028.1	0.582
MA0029.1	MA0029.1	0.18
MA0030.1	MA0030.1	0.0621
MA0031.1	MA0031.1	0.271
MA0035.2	MA0035.2	0.00299
MA0038.1	MA0038.1	0.0922
MA0039.2	MA0039.2	0.00425
MA0040.1	MA0040.1	0.653
MA0041.1	MA0041.1	0.423
MA0042.1	MA0042.1	0.205
MA0043.1	MA0043.1	0.0415
MA0046.1	MA0046.1	0.126
MA0047.2	MA0047.2	0.932
MA0048.1	MA0048.1	0.0986
MA0050.1	MA0050.1	0.665
MA0051.1	MA0051.1	0.383
MA0052.1	MA0052.1	0.671
MA0055.1	MA0055.1	0.644
MA0057.1	MA0057.1	0.573
MA0058.1	MA0058.1	0.262
MA0059.1	MA0059.1	0.643
MA0060.1	MA0060.1	2.0357e-8
MA0061.1	MA0061.1	0.112
MA0062.2	MA0062.2	1.35642e-4
MA0065.2	MA0065.2	0.377
MA0066.1	MA0066.1	0.57
MA0067.1	MA0067.1	0.23
MA0068.1	MA0068.1	0.62
MA0069.1	MA0069.1	0.243
MA0070.1	MA0070.1	0.546
MA0071.1	MA0071.1	0.316
MA0072.1	MA0072.1	0.732
MA0073.1	MA0073.1	0.895
MA0074.1	MA0074.1	0.115
MA0076.1	MA0076.1	0.525
MA0077.1	MA0077.1	0.0109
MA0078.1	MA0078.1	0.515
MA0079.2	MA0079.2	0.672
MA0080.2	MA0080.2	9.9838e-10
MA0081.1	MA0081.1	0.0264
MA0083.1	MA0083.1	6.39047e-11
MA0084.1	MA0084.1	0.573
MA0087.1	MA0087.1	0.823
MA0088.1	MA0088.1	0.682
MA0090.1	MA0090.1	9.24686e-4
MA0091.1	MA0091.1	0.125
MA0092.1	MA0092.1	0.744
MA0093.1	MA0093.1	0.44
MA0099.2	MA0099.2	0.73
MA0100.1	MA0100.1	0.318
MA0101.1	MA0101.1	0.0122
MA0102.2	MA0102.2	0.639
MA0103.1	MA0103.1	4.77417e-4
MA0104.2	MA0104.2	0.79
MA0105.1	MA0105.1	0.91
MA0106.1	MA0106.1	0.28
MA0107.1	MA0107.1	0.00431
MA0108.2	MA0108.2	0.103
MA0111.1	MA0111.1	0.274
MA0112.2	MA0112.2	0.0384
MA0113.1	MA0113.1	0.661
MA0114.1	MA0114.1	0.408
MA0115.1	MA0115.1	0.0224
MA0116.1	MA0116.1	0.884
MA0117.1	MA0117.1	0.511
MA0119.1	MA0119.1	0.394
MA0122.1	MA0122.1	0.586
MA0124.1	MA0124.1	0.985
MA0125.1	MA0125.1	0.064
MA0131.1	MA0131.1	0.429
MA0135.1	MA0135.1	0.444
MA0136.1	MA0136.1	3.27273e-9
MA0137.2	MA0137.2	0.0322
MA0138.2	MA0138.2	0.534
MA0139.1	MA0139.1	0.536
MA0140.1	MA0140.1	0.059
MA0141.1	MA0141.1	0.806
MA0142.1	MA0142.1	0.153
MA0143.1	MA0143.1	0.186
MA0144.1	MA0144.1	0.155
MA0145.1	MA0145.1	0.479
MA0146.1	MA0146.1	0.479
MA0147.1	MA0147.1	0.48
MA0148.1	MA0148.1	0.51
MA0149.1	MA0149.1	0.941
MA0150.1	MA0150.1	0.804
MA0152.1	MA0152.1	1.88283e-4
MA0153.1	MA0153.1	0.331
MA0154.1	MA0154.1	0.797
MA0155.1	MA0155.1	0.518
MA0156.1	MA0156.1	5.02425e-7
MA0157.1	MA0157.1	0.63
MA0159.1	MA0159.1	0.719
MA0160.1	MA0160.1	0.21
MA0162.1	MA0162.1	0.385
MA0163.1	MA0163.1	0.107
MA0164.1	MA0164.1	0.824
MA0258.1	MA0258.1	0.493
MA0259.1	MA0259.1	0.554

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12367

Novel motif	Logo	P-value
1	1	0.83
10	10	0.519
100	100	0.819
101	101	0.578
102	102	0.00331
103	103	0.352
104	104	0.536
105	105	0.278
106	106	0.838
107	107	0.878
108	108	0.613
109	109	0.829
11	11	0.96
110	110	0.237
111	111	0.658
112	112	0.746
113	113	0.00403
114	114	0.277
115	115	0.369
116	116	0.275
117	117	0.751
118	118	0.412
119	119	0.936
12	12	0.266
120	120	0.881
121	121	0.312
122	122	0.0347
123	123	2.31403e-5
124	124	0.451
125	125	0.961
126	126	0.53
127	127	0.722
128	128	0.472
129	129	0.726
13	13	0.702
130	130	0.686
131	131	0.624
132	132	0.463
133	133	0.889
134	134	0.397
135	135	0.776
136	136	0.743
137	137	0.56
138	138	0.424
139	139	0.737
14	14	0.62
140	140	0.886
141	141	0.101
142	142	0.272
143	143	0.872
144	144	0.219
145	145	0.762
146	146	0.588
147	147	0.0233
148	148	0.933
149	149	0.134
15	15	0.524
150	150	0.868
151	151	0.83
152	152	0.536
153	153	0.419
154	154	0.68
155	155	0.00563
156	156	0.12
157	157	0.36
158	158	0.00555
159	159	0.146
16	16	0.0537
160	160	0.638
161	161	0.615
162	162	0.42
163	163	0.865
164	164	0.351
165	165	0.655
166	166	0.00564
167	167	0.278
168	168	0.406
169	169	0.121
17	17	0.917
18	18	0.413
19	19	0.00399
2	2	0.972
20	20	0.852
21	21	0.563
22	22	0.322
23	23	0.492
24	24	0.126
25	25	0.189
26	26	0.622
27	27	0.732
28	28	0.492
29	29	0.219
3	3	0.697
30	30	0.337
31	31	0.632
32	32	4.0196e-13
33	33	0.713
34	34	0.391
35	35	0.67
36	36	0.0479
37	37	0.0216
38	38	0.237
39	39	0.216
4	4	0.0138
40	40	0.0303
41	41	0.188
42	42	0.341
43	43	0.758
44	44	0.519
45	45	0.991
46	46	0.633
47	47	0.0976
48	48	0.341
49	49	0.227
5	5	0.668
50	50	0.428
51	51	0.415
52	52	0.958
53	53	0.0304
54	54	0.635
55	55	0.0421
56	56	0.904
57	57	0.467
58	58	0.102
59	59	0.341
6	6	0.261
60	60	0.812
61	61	0.651
62	62	0.179
63	63	0.398
64	64	0.431
65	65	0.975
66	66	0.154
67	67	0.987
68	68	0.464
69	69	0.677
7	7	0.226
70	70	0.986
71	71	0.843
72	72	0.923
73	73	0.0762
74	74	0.128
75	75	0.919
76	76	0.458
77	77	0.0645
78	78	0.00275
79	79	0.003
8	8	0.697
80	80	0.379
81	81	0.923
82	82	0.747
83	83	0.894
84	84	0.805
85	85	0.908
86	86	0.229
87	87	0.698
88	88	0.234
89	89	0.0273
9	9	0.609
90	90	0.518
91	91	0.36
92	92	0.363
93	93	0.884
94	94	0.978
95	95	0.835
96	96	0.501
97	97	0.244
98	98	0.506
99	99	0.0359

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12367

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000269 human mesenchymal precursor cell of bone marrow sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002092 (bone marrow cell)
0002540 (mesenchymal stem cell of the bone marrow)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000269 (human mesenchymal precursor cell of bone marrow sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:11751-123G5
+|DRA_sample_Accession=CAGE@SAMD00005728
-|name=mesenchymal precursor cell - bone marrow, donor2
+|accession_numbers=CAGE;DRX008549;DRR009421;DRZ000846;DRZ002231;DRZ012196;DRZ013581
-|sample_id=11751
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002371,UBERON:0001474,UBERON:0002384,UBERON:0000479,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0010317,UBERON:0002204,UBERON:0001434,UBERON:0002390,UBERON:0002193,UBERON:0002405
-|rna_tube_id=123G5
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002092,CL:0002540
-|rna_box=123
-|rna_position=G5
-|sample_cell_lot=BM-37
-|sample_cell_catalog=
-|sample_company=
-|rna_lot_number=
-|rna_catalog_number=
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=
-|sample_tissue=bone marrow
-|sample_donor(cell lot)=
-|sample_sex=
-|sample_age=
-|sample_ethnicity=
-|rna_rin=
-|rna_od260/230=2.14
-|rna_od260/280=2.05
-|sample_cell_type=mesenchymal precursor cell
-|sample_cell_line=
-|sample_collaboration=Claudio Schneider LNCIB
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=
-|rna_extraction_protocol=
-|rna_weight_ug=40.287
-|rna_concentration=0.53716
-|sample_note=
-|profile_hcage=CNhs12367,LSID914,release011,COMPLETED
-|profile_cagescan=,,,
-|profile_srnaseq=,,,
-|profile_rnaseq=,,,
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002092,CL:0002320,CL:0002371,CL:0002540
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000269
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
+|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.54!37.99!PRRX1;;chr2:45236540..45236577,-!p1@SIX2!1.45!26.92!SIX2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.45!26.92!HOXC5;;chr12:54378923..54378966,+!p1@HOXC10!1.35!21.13!HOXC10;;chr6:45296048..45296082,+!p1@RUNX2!1.33!23.40!RUNX2;;chr4:174451370..174451387,-!p1@HAND2!1.31!19.62!HAND2;;chr10:131762504..131762555,-!p1@EBF3!1.31!19.37!EBF3;;chr7:19157248..19157268,-!p1@TWIST1!1.27!48.05!TWIST1;;chr1:170633348..170633399,+!p2@PRRX1!1.22!21.38!PRRX1;;chr8:22550982..22550999,-!p1@EGR3!1.19!41.01!EGR3;;chr1:170633262..170633285,+!p3@PRRX1!1.18!16.10!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!1.15!291.06!AEBP1;;chr15:42749722..42749739,-!p2@ZFP106!1.14!23.14!ZFP106;;chr5:158526917..158526932,-!p1@EBF1!1.13!30.94!EBF1;;chr6:85474299..85474324,-!p1@TBX18!1.12!21.63!TBX18;;chr8:25902876..25902936,-!p1@EBF2!1.12!12.33!EBF2;;chr12:54380036..54380091,+!p4@HOXC10!1.12!12.08!HOXC10;;chr7:44143978..44143989,+!p2@AEBP1!1.11!21.63!AEBP1;;chr6:1610293..1610310,+!p1@FOXC1!1.11!19.87!FOXC1;;chr2:19558373..19558392,-!p1@OSR1!1.10!31.95!OSR1;;chr4:174450089..174450153,-!p2@HAND2!1.10!11.57!HAND2;;chr20:50179368..50179392,-!p2@NFATC2!1.09!14.84!NFATC2;;chr19:45971246..45971265,+!p1@FOSB!1.08!203.77!FOSB;;chr1:170632959..170632987,+!p4@PRRX1!1.07!11.82!PRRX1;;chr14:24837368..24837401,+!p1@NFATC4!1.06!24.65!NFATC4;;chr19:13134772..13134822,+!p2@NFIX!1.05!15.09!NFIX;;chr21:36260773..36260804,-!p7@RUNX1!1.05!13.84!RUNX1;;chr7:44143997..44144008,+!p3@AEBP1!1.05!13.08!AEBP1;;chr16:54320617..54320643,-!p3@IRX3!1.05!13.08!IRX3;;chrY:21906594..21906622,-!p1@KDM5D!1.04!10.06!KDM5D;;chr1:170632477..170632506,+!p6@PRRX1!1.01!9.31!PRRX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.01!9.31!HOXC5;;chr3:21792682..21792720,-!p1@ZNF385D!1.01!9.31!ZNF385D;;chr1:44513995..44514031,+!p1@KLF17!1.00!9.06!KLF17;;chr11:46299199..46299233,+!p1@CREB3L1!0.99!46.79!CREB3L1;;chr1:158979872..158979898,+!p3@IFI16!0.98!27.17!IFI16;;chr12:66218255..66218304,+!p3@HMGA2!0.98!23.40!HMGA2;;chr16:54320646..54320672,-!p2@IRX3!0.98!13.33!IRX3;;chr12:66218598..66218645,+!p2@HMGA2!0.97!39.75!HMGA2;;chr1:170632250..170632277,+!p7@PRRX1!0.94!7.80!PRRX1;;chr16:79634624..79634642,-!p1@MAF!0.92!29.69!MAF;;chr2:45236579..45236596,-!p2@SIX2!0.92!7.30!SIX2;;chr7:15726296..15726315,-!p1@MEOX2!0.92!7.30!MEOX2;;chr7:19157043..19157088,-!p2@TWIST1!0.90!18.11!TWIST1;;chr6:1312325..1312340,+!p1@FOXQ1!0.90!11.57!FOXQ1;;chr7:27224842..27224872,-!p1@HOXA11!0.89!6.79!HOXA11;;chr12:54380404..54380433,+!p3@HOXC10!0.88!6.54!HOXC10;;chr9:132427972..132428056,+!p1@PRRX2!0.86!8.30!PRRX2;;chr7:27213893..27213954,-!p1@HOXA10!0.86!6.29!HOXA10;;chr16:54320675..54320715,-!p1@IRX3!0.85!13.84!IRX3;;chr10:64576105..64576133,-!p1@EGR2!0.85!13.08!EGR2;;chr20:51588873..51588953,+!p1@TSHZ2!0.84!8.05!TSHZ2;;chr1:203055129..203055147,-!p1@MYOG!0.83!5.79!MYOG;;chr16:54320322..54320343,-!p7@IRX3!0.83!5.79!IRX3;;chr14:61116183..61116208,-!p1@SIX1!0.81!22.14!SIX1;;chr6:126240442..126240459,+!p4@NCOA7!0.81!7.04!NCOA7;;chr14:62162258..62162269,+!p2@HIF1A!0.80!55.85!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!0.80!29.94!HIF1A;;chr5:137804484..137804498,+!p2@EGR1!0.80!23.14!EGR1;;chr11:46299539..46299620,+!p2@CREB3L1!0.80!9.31!CREB3L1;;chr12:54410948..54410992,+!p3@HOXC5!0.80!5.28!HOXC5;;chr7:27205106..27205134,-!p2@HOXA9!0.80!5.28!HOXA9;;chr1:158979792..158979814,+!p2@IFI16!0.78!52.58!IFI16;;chr16:54964740..54964789,+!p1@IRX5!0.78!7.55!IRX5;;chr7:96654133..96654150,-!p1@DLX5!0.78!5.03!DLX5;;chr12:54393880..54393962,+!p1@HOXC9!0.78!5.03!HOXC9;;chr3:189349162..189349207,+!p2@TP63!0.78!5.03!TP63;;chr16:54320101..54320125,-!p4@IRX3!0.77!7.30!IRX3;;chr1:158969752..158969780,+!p6@IFI16!0.76!8.80!IFI16;;chr3:157824001..157824078,-!p2@SHOX2!0.76!4.78!SHOX2;;chr7:27224795..27224840,-!p2@HOXA11!0.76!4.78!HOXA11;;chr12:54379029..54379057,+!p2@HOXC10!0.76!4.78!HOXC10;;chr11:65686732..65686756,+!p2@DRAP1!0.74!21.13!DRAP1;;chr7:96654026..96654061,-!p2@DLX5!0.74!4.53!DLX5;;chr7:15726243..15726293,-!p2@MEOX2!0.72!4.28!MEOX2;;chr8:77593750..77593757,+!p3@ZFHX4!0.72!4.28!ZFHX4;;chr14:75745523..75745537,+!p1@FOS!0.71!569.05!FOS;;chr10:63809106..63809127,+!p1@ARID5B!0.71!62.89!ARID5B;;chr9:16870710..16870763,-!p1@BNC2!0.71!7.55!BNC2;;chr9:132427883..132427951,+!p2@PRRX2!0.70!4.03!PRRX2;;chr16:54319010..54319041,-!p8@IRX3!0.70!4.03!IRX3;;chr7:14029283..14029311,-!p1@ETV1!0.69!23.65!ETV1;;chr3:114343768..114343822,-!p1@ZBTB20!0.69!19.37!ZBTB20;;chr21:36421535..36421610,-!p2@RUNX1!0.69!15.60!RUNX1;;chr2:145277882..145277967,-!p3@ZEB2!0.69!7.30!ZEB2;;chr1:158985493..158985535,+!p4@IFI16!0.69!6.29!IFI16;;chr12:66218212..66218244,+!p5@HMGA2!0.68!5.79!HMGA2;;chr9:16870659..16870675,-!p2@BNC2!0.68!4.78!BNC2;;chr9:77112244..77112262,+!p1@RORB!0.68!4.28!RORB;;chrY:2803415..2803468,+!p1@ZFY!0.68!3.77!ZFY;;chr1:170632723..170632739,+!p8@PRRX1!0.68!3.77!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.68!3.77!PRRX1;;chr7:27205136..27205164,-!p1@HOXA9!0.68!3.77!HOXA9;;chr14:95236440..95236465,-!p1@GSC!0.68!3.77!GSC;;chr3:157823517..157823562,-!p1@SHOX2!0.67!4.03!SHOX2;;chr3:21792585..21792625,-!p2@ZNF385D!0.66!4.03!ZNF385D;;chr3:141087454..141087465,+!p19@ZBTB38!0.66!3.52!ZBTB38;;chr6:1612300..1612324,+!p3@FOXC1!0.66!3.52!FOXC1;;chr7:27192185..27192209,-!p1@HOXA3!0.66!3.52!HOXA3;;chr12:54380112..54380126,+!p5@HOXC10!0.66!3.52!HOXC10;;chr1:59249688..59249703,-!p3@JUN!0.65!24.15!JUN;;chr8:99956662..99956684,+!p1@OSR2!0.65!5.79!OSR2;;chr18:22932080..22932170,-!p1@ZNF521!0.64!16.60!ZNF521;;chr16:79633894..79633954,-!p3@MAF!0.64!7.04!MAF;;chr2:200322654..200322707,-!p2@SATB2!0.64!5.28!SATB2;;chr6:85473156..85473210,-!p2@TBX18!0.64!4.28!TBX18;;chr5:158527139..158527161,-!p5@EBF1!0.63!3.27!EBF1;;chr3:21792631..21792665,-!p3@ZNF385D!0.63!3.27!ZNF385D;;chr12:54402745..54402788,+!p1@HOXC8!0.63!3.27!HOXC8;;chr19:13135386..13135435,+!p4@NFIX!0.63!3.27!NFIX;;chr8:49833978..49833996,-!p1@SNAI2!0.62!77.99!SNAI2;;chr11:65687158..65687216,+!p4@DRAP1!0.62!21.13!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!0.62!6.04!DRAP1;;chr6:1612248..1612281,+!p2@FOXC1!0.62!3.52!FOXC1;;chr2:208394817..208394834,+!p3@CREB1!0.61!14.34!CREB1;;chr7:113726357..113726443,+!p1@FOXP2!0.61!5.79!FOXP2;;chr5:158526459..158526481,-!p2@EBF1!0.61!4.28!EBF1;;chr6:126240463..126240489,+!p6@NCOA7!0.61!3.52!NCOA7;;chr20:39317868..39317884,-!p1@MAFB!0.60!42.77!MAFB;;chr9:4300050..4300118,-!p1@GLIS3!0.60!23.14!GLIS3;;chr14:62213827..62213853,+!p6@HIF1A!0.60!4.53!HIF1A;;chr11:46299443..46299459,+!p4@CREB3L1!0.60!3.02!CREB3L1;;chr12:54394309..54394336,+!p2@HOXC9!0.60!3.02!HOXC9;;chr1:170632137..170632172,+!p10@PRRX1!0.60!3.02!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.60!3.02!PRRX1;;chr4:174451350..174451363,-!p3@HAND2!0.60!3.02!HAND2;;chr16:54320280..54320291,-!p9@IRX3!0.60!3.02!IRX3;;chr8:93074803..93074845,-!p1@RUNX1T1!0.60!3.02!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.60!3.02!RUNX1T1;;chr5:72744594..72744609,-!p1@FOXD1!0.59!15.60!FOXD1;;chr2:239756671..239756732,+!p1@TWIST2!0.58!10.57!TWIST2;;chr7:27195867..27195893,-!p3@HOXA7!0.58!2.77!HOXA7;;chr7:27196267..27196311,-!p1@HOXA7!0.58!2.77!HOXA7;;chr10:119303078..119303169,+!p2@EMX2!0.58!2.77!EMX2;;chr1:170632439..170632465,+!p11@PRRX1!0.58!2.77!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.58!2.77!PRRX1;;chr16:54320302..54320317,-!p10@IRX3!0.58!2.77!IRX3;;chr5:137801160..137801176,+!p1@EGR1!0.56!331.82!EGR1;;chr8:49833948..49833973,-!p2@SNAI2!0.56!20.63!SNAI2;;chr10:63809134..63809145,+!p6@ARID5B!0.56!7.04!ARID5B;;chr12:66218183..66218209,+!p4@HMGA2!0.56!5.79!HMGA2;;chr3:178789522..178789564,-!p2@ZMAT3!0.55!23.40!ZMAT3;;chr12:53614115..53614154,-!p1@RARG!0.55!16.60!RARG;;chr11:65687362..65687436,+!p3@DRAP1!0.55!14.34!DRAP1;;chr8:77593474..77593612,+!p1@ZFHX4!0.55!13.08!ZFHX4;;chr19:44037546..44037594,+!p1@ZNF575!0.55!6.04!ZNF575;;chr16:79634595..79634620,-!p2@MAF!0.55!5.28!MAF;;chr19:42788636..42788660,+!p1@CIC!0.55!4.78!CIC;;chr5:72744445..72744466,-!p2@FOXD1!0.55!4.78!FOXD1;;chr16:54320158..54320200,-!p5@IRX3!0.55!4.03!IRX3;;chr4:26322673..26322684,+!p11@RBPJ!0.55!2.52!RBPJ;;chrY:21906761..21906810,-!p2@KDM5D!0.55!2.52!KDM5D;;chr2:27357446..27357475,-!p2@PREB!0.54!10.31!PREB;;chr4:26322267..26322334,+!p3@RBPJ!0.54!7.04!RBPJ;;chr13:41635029..41635044,-!p4@ELF1!0.54!6.04!ELF1;;chr14:62203595..62203676,+!p4@HIF1A!0.54!5.28!HIF1A;;chr7:14028488..14028516,-!p2@ETV1!0.54!2.77!ETV1;;chr14:62162224..62162254,+!p1@HIF1A!0.53!450.31!HIF1A;;chr8:116681409..116681431,-!p2@TRPS1!0.53!7.80!TRPS1;;chr5:134369905..134369972,-!p1@PITX1!0.53!4.03!PITX1;;chr12:56753869..56753930,-!p1@STAT2!0.52!132.32!STAT2;;chr12:96588143..96588185,+!p1@ELK3!0.52!36.23!ELK3;;chr7:17338266..17338282,+!p1@AHR!0.52!32.20!AHR;;chr5:321810..321877,+!p1@AHRR!0.52!9.06!AHRR;;chr3:12329397..12329433,+!p2@PPARG!0.52!6.29!PPARG;;chr12:66218573..66218596,+!p7@HMGA2!0.52!3.77!HMGA2;;chr7:28448995..28449011,+!p4@CREB5!0.52!3.52!CREB5;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.52!3.27!GLIS2;;chr8:72756637..72756664,-!p3@MSC!0.52!2.77!MSC;;chr2:145277640..145277771,-!p1@ZEB2!0.51!39.50!ZEB2;;chr10:63809013..63809041,+!p3@ARID5B!0.51!15.85!ARID5B;;chr17:59477233..59477263,+!p1@TBX2!0.51!8.55!TBX2;;chr13:74708029..74708077,-!p2@KLF12!0.51!7.80!KLF12;;chr1:200379104..200379128,-!p2@ZNF281!0.51!6.54!ZNF281;;chr16:31076332..31076388,-!p3@ZNF668!0.51!2.26!ZNF668;;chr2:102091566..102091581,-!p1@RFX8!0.51!2.26!RFX8;;chr2:176994408..176994492,+!p1@HOXD8!0.51!2.26!HOXD8;;chr2:19558327..19558334,-!p2@OSR1!0.51!2.26!OSR1;;chr3:141121871..141121885,+!p13@ZBTB38!0.51!2.26!ZBTB38;;chr3:21792790..21792824,-!p4@ZNF385D!0.51!2.26!ZNF385D;;chr7:15725757..15725828,-!p5@MEOX2!0.51!2.26!MEOX2;;chr7:27196217..27196246,-!p2@HOXA7!0.51!2.26!HOXA7;;chr8:116673894..116673913,-!p12@TRPS1!0.51!2.26!TRPS1;;chr12:66218904..66218913,+!p11@HMGA2!0.51!2.26!HMGA2;;chr14:62214151..62214164,+!p11@HIF1A!0.51!2.26!HIF1A;;chr9:16705069..16705086,-!p3@BNC2!0.51!2.26!BNC2;;chr2:191878874..191878938,-!p1@STAT1!0.50!157.23!STAT1;;c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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002092;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002540;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 41: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
-|comment=
-|created_by=
-|creation_date=
-|def=
 |has_quality=
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000269
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg38.nobarcode.ctss.bed.gz
+|id=FF:11751-123G5
+|is_a=EFO:0002091;;FF:0000269
+|is_obsolete=
+|library_id=CNhs12367
+|library_id_phase_based=2:CNhs12367
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11751
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11751
+|name=mesenchymal precursor cell - bone marrow, donor2
 |namespace=FANTOM5
 |part_of=
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+|profile_hcage=CNhs12367,LSID914,release011,COMPLETED
+|profile_rnaseq=
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+|rna_od260/230=2.14
+|rna_od260/280=2.05
+|rna_position=G5
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+|rna_weight_ug=40.287
+|sample_age=
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+|sample_cell_catalog=
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+|sample_cell_lot=BM-37
+|sample_cell_type=mesenchymal precursor cell
+|sample_collaboration=Claudio Schneider LNCIB
+|sample_company=
+|sample_description=
+|sample_dev_stage=
+|sample_disease=
+|sample_donor(cell lot)=
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+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.24648763160291e-207!GO:0005737;cytoplasm;1.98090013455187e-195!GO:0043226;organelle;8.31142782639905e-160!GO:0043229;intracellular organelle;1.50712605410136e-159!GO:0043231;intracellular membrane-bound organelle;1.61935656291478e-154!GO:0043227;membrane-bound organelle;3.25562425267133e-154!GO:0044444;cytoplasmic part;9.14451602801408e-154!GO:0044422;organelle part;2.37897277302285e-119!GO:0044446;intracellular organelle part;5.89175810017651e-118!GO:0032991;macromolecular complex;3.10493066436365e-83!GO:0030529;ribonucleoprotein complex;2.80166170757073e-75!GO:0005515;protein binding;1.47242961687757e-72!GO:0044238;primary metabolic process;3.83759209444382e-70!GO:0044237;cellular metabolic process;1.58605064682842e-69!GO:0005739;mitochondrion;9.35873196557578e-64!GO:0043170;macromolecule metabolic process;1.73446808451079e-62!GO:0043233;organelle lumen;1.78189963488115e-60!GO:0031974;membrane-enclosed lumen;1.78189963488115e-60!GO:0003723;RNA binding;3.49346438649993e-57!GO:0044428;nuclear part;1.46491545473625e-53!GO:0031090;organelle membrane;7.52895135917377e-53!GO:0005840;ribosome;1.08997515221177e-48!GO:0019538;protein metabolic process;1.15047146559838e-46!GO:0006412;translation;4.67266411142272e-44!GO:0015031;protein transport;7.73156279571322e-44!GO:0003735;structural constituent of ribosome;1.71328126823537e-43!GO:0005634;nucleus;2.12581937267559e-43!GO:0033036;macromolecule localization;3.08714689485638e-43!GO:0044429;mitochondrial part;2.96665687244912e-42!GO:0016043;cellular component organization and biogenesis;8.68430384536228e-42!GO:0045184;establishment of protein localization;1.42708786516933e-41!GO:0044260;cellular macromolecule metabolic process;1.98606462693285e-41!GO:0043234;protein complex;2.31816440213689e-41!GO:0008104;protein localization;6.14637807559398e-41!GO:0005829;cytosol;6.53218165613314e-41!GO:0009058;biosynthetic process;1.14439960183587e-40!GO:0044267;cellular protein metabolic process;3.97236002313166e-40!GO:0033279;ribosomal subunit;9.85447909712109e-39!GO:0009059;macromolecule biosynthetic process;1.86212693609345e-37!GO:0006396;RNA processing;2.3160208277455e-37!GO:0031967;organelle envelope;3.19650677533503e-35!GO:0031975;envelope;7.50498261184555e-35!GO:0044249;cellular biosynthetic process;1.16289083549681e-34!GO:0031981;nuclear lumen;1.29283595027799e-32!GO:0046907;intracellular transport;2.16315677103891e-32!GO:0016071;mRNA metabolic process;1.53460002616109e-30!GO:0008380;RNA splicing;9.96519285111303e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.2902203682388e-28!GO:0010467;gene expression;1.63527346387469e-28!GO:0005740;mitochondrial envelope;6.46337800863965e-28!GO:0006886;intracellular protein transport;1.00492592791352e-27!GO:0043283;biopolymer metabolic process;1.3855795638685e-27!GO:0006397;mRNA processing;1.84555305672411e-26!GO:0005783;endoplasmic reticulum;2.07368007946663e-26!GO:0031966;mitochondrial membrane;3.87098113270066e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.76025695389907e-25!GO:0019866;organelle inner membrane;2.55264381374739e-24!GO:0065003;macromolecular complex assembly;3.09151765669965e-24!GO:0005743;mitochondrial inner membrane;4.25585173552958e-23!GO:0006119;oxidative phosphorylation;1.08174522150605e-22!GO:0044445;cytosolic part;1.08174522150605e-22!GO:0022607;cellular component assembly;2.74893157374743e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.12478228743071e-22!GO:0043228;non-membrane-bound organelle;1.16829939683277e-21!GO:0043232;intracellular non-membrane-bound organelle;1.16829939683277e-21!GO:0006457;protein folding;1.68410599461645e-21!GO:0012505;endomembrane system;2.39882695873233e-21!GO:0044432;endoplasmic reticulum part;7.71776932730947e-21!GO:0051641;cellular localization;1.53120088901003e-20!GO:0051649;establishment of cellular localization;2.0100337078832e-20!GO:0015935;small ribosomal subunit;2.38395417010946e-20!GO:0006996;organelle organization and biogenesis;3.07394785804733e-20!GO:0005681;spliceosome;1.23968086410609e-19!GO:0005654;nucleoplasm;1.51699687066401e-19!GO:0015934;large ribosomal subunit;2.0390758379091e-19!GO:0048770;pigment granule;2.13742356411477e-19!GO:0042470;melanosome;2.13742356411477e-19!GO:0044455;mitochondrial membrane part;5.13626232864335e-19!GO:0005794;Golgi apparatus;1.36818087913457e-18!GO:0051186;cofactor metabolic process;2.17258986880335e-17!GO:0031980;mitochondrial lumen;3.39927506184712e-17!GO:0005759;mitochondrial matrix;3.39927506184712e-17!GO:0005746;mitochondrial respiratory chain;6.38177108129783e-17!GO:0022618;protein-RNA complex assembly;8.74970838308635e-17!GO:0000502;proteasome complex (sensu Eukaryota);2.15838975115183e-16!GO:0016462;pyrophosphatase activity;2.41835347717474e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.5791461476917e-16!GO:0044451;nucleoplasm part;3.59134671354642e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;3.60795419020657e-16!GO:0044265;cellular macromolecule catabolic process;5.56747813623367e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.93891654332199e-16!GO:0008134;transcription factor binding;1.08230204811164e-15!GO:0017111;nucleoside-triphosphatase activity;1.7209305145937e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.45841643693213e-15!GO:0043285;biopolymer catabolic process;8.63901554738446e-15!GO:0048193;Golgi vesicle transport;9.28861739775493e-15!GO:0016874;ligase activity;9.85490479285938e-15!GO:0009057;macromolecule catabolic process;1.01332467602322e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.10850996386685e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.15371631766202e-14!GO:0003954;NADH dehydrogenase activity;1.15371631766202e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.15371631766202e-14!GO:0006512;ubiquitin cycle;1.40950905436218e-14!GO:0000166;nucleotide binding;1.54399445062871e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.28936686573518e-14!GO:0044248;cellular catabolic process;2.30325537935345e-14!GO:0005789;endoplasmic reticulum membrane;2.98829582293318e-14!GO:0008135;translation factor activity, nucleic acid binding;3.75462561639803e-14!GO:0019941;modification-dependent protein catabolic process;4.80132608423705e-14!GO:0043632;modification-dependent macromolecule catabolic process;4.80132608423705e-14!GO:0006605;protein targeting;5.00005126684042e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.12356528626689e-14!GO:0044257;cellular protein catabolic process;6.12374172018074e-14!GO:0006511;ubiquitin-dependent protein catabolic process;6.65589188792093e-14!GO:0051082;unfolded protein binding;8.09926543010937e-14!GO:0005730;nucleolus;8.65193554499552e-14!GO:0016192;vesicle-mediated transport;1.78297258322312e-13!GO:0005761;mitochondrial ribosome;1.90297374011265e-13!GO:0000313;organellar ribosome;1.90297374011265e-13!GO:0030163;protein catabolic process;2.16858360446518e-13!GO:0006732;coenzyme metabolic process;2.23005830532207e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.42936502485877e-13!GO:0005793;ER-Golgi intermediate compartment;2.55475162740326e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.10877773906455e-13!GO:0042773;ATP synthesis coupled electron transport;4.10877773906455e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.46115329561505e-13!GO:0045271;respiratory chain complex I;5.46115329561505e-13!GO:0005747;mitochondrial respiratory chain complex I;5.46115329561505e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.80762181831357e-12!GO:0009055;electron carrier activity;1.52523635370503e-11!GO:0003676;nucleic acid binding;1.61478735705104e-11!GO:0006259;DNA metabolic process;1.71073957926697e-11!GO:0003743;translation initiation factor activity;2.19606753031657e-11!GO:0006413;translational initiation;5.76009366605524e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;8.58581343454818e-11!GO:0000375;RNA splicing, via transesterification reactions;8.58581343454818e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.58581343454818e-11!GO:0043412;biopolymer modification;1.46681246588103e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.99978995030668e-10!GO:0006163;purine nucleotide metabolic process;2.32064376732435e-10!GO:0009259;ribonucleotide metabolic process;2.8043889108974e-10!GO:0009150;purine ribonucleotide metabolic process;2.81283434591003e-10!GO:0005768;endosome;3.11358531721754e-10!GO:0017076;purine nucleotide binding;3.20072730917007e-10!GO:0016491;oxidoreductase activity;3.44653033316987e-10!GO:0016070;RNA metabolic process;6.91435954139807e-10!GO:0012501;programmed cell death;7.59458526159457e-10!GO:0009199;ribonucleoside triphosphate metabolic process;1.15129150542588e-09!GO:0003712;transcription cofactor activity;1.19593423423486e-09!GO:0032553;ribonucleotide binding;1.22749130385911e-09!GO:0032555;purine ribonucleotide binding;1.22749130385911e-09!GO:0009141;nucleoside triphosphate metabolic process;1.24229110320038e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.3529614336896e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.3529614336896e-09!GO:0006915;apoptosis;1.3597075156462e-09!GO:0006446;regulation of translational initiation;1.82342940527477e-09!GO:0006464;protein modification process;2.03348087380069e-09!GO:0042254;ribosome biogenesis and assembly;2.20751642882286e-09!GO:0009056;catabolic process;2.36598763922374e-09!GO:0006164;purine nucleotide biosynthetic process;2.52362217168043e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.61604139150198e-09!GO:0005788;endoplasmic reticulum lumen;3.00489899631758e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.00489899631758e-09!GO:0045333;cellular respiration;3.8354145696125e-09!GO:0005773;vacuole;3.97939120509998e-09!GO:0007049;cell cycle;3.99850663768568e-09!GO:0009060;aerobic respiration;6.58849412017452e-09!GO:0015986;ATP synthesis coupled proton transport;6.76140873093715e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.76140873093715e-09!GO:0008219;cell death;7.2625720754743e-09!GO:0016265;death;7.2625720754743e-09!GO:0016604;nuclear body;7.80509897246154e-09!GO:0009260;ribonucleotide biosynthetic process;8.31619472091459e-09!GO:0046034;ATP metabolic process;9.26724303828856e-09!GO:0008639;small protein conjugating enzyme activity;1.37145836625219e-08!GO:0005635;nuclear envelope;1.39883829034708e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.55762373339176e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.55762373339176e-08!GO:0048523;negative regulation of cellular process;1.61689628960501e-08!GO:0008565;protein transporter activity;1.6913557062448e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.83348359185077e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.83348359185077e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.95146913590078e-08!GO:0031965;nuclear membrane;1.99693637165332e-08!GO:0051188;cofactor biosynthetic process;2.06652124742374e-08!GO:0019787;small conjugating protein ligase activity;2.14018237583358e-08!GO:0004842;ubiquitin-protein ligase activity;2.45845764861367e-08!GO:0019829;cation-transporting ATPase activity;2.62058280052286e-08!GO:0003924;GTPase activity;3.11847743630988e-08!GO:0044431;Golgi apparatus part;3.56894830004983e-08!GO:0006461;protein complex assembly;3.90917118277451e-08!GO:0044440;endosomal part;4.01467295682022e-08!GO:0010008;endosome membrane;4.01467295682022e-08!GO:0000323;lytic vacuole;4.56995139989819e-08!GO:0005764;lysosome;4.56995139989819e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.84981538021848e-08!GO:0006091;generation of precursor metabolites and energy;4.88041314395229e-08!GO:0006913;nucleocytoplasmic transport;8.18880529561078e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.2084919272348e-08!GO:0016881;acid-amino acid ligase activity;1.04239407865987e-07!GO:0030120;vesicle coat;1.0430877634835e-07!GO:0030662;coated vesicle membrane;1.0430877634835e-07!GO:0006754;ATP biosynthetic process;1.12148545782076e-07!GO:0006753;nucleoside phosphate metabolic process;1.12148545782076e-07!GO:0005770;late endosome;1.13925906338633e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.16809632304371e-07!GO:0006974;response to DNA damage stimulus;1.17833379680703e-07!GO:0051169;nuclear transport;1.57526678696202e-07!GO:0006099;tricarboxylic acid cycle;2.14510958210816e-07!GO:0046356;acetyl-CoA catabolic process;2.14510958210816e-07!GO:0016607;nuclear speck;2.48024234995871e-07!GO:0008361;regulation of cell size;2.58967619600824e-07!GO:0016049;cell growth;3.12763013810233e-07!GO:0042623;ATPase activity, coupled;3.1537643910768e-07!GO:0017038;protein import;3.1537643910768e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.23078489707608e-07!GO:0048475;coated membrane;3.23078489707608e-07!GO:0030117;membrane coat;3.23078489707608e-07!GO:0016887;ATPase activity;3.27869964342065e-07!GO:0006399;tRNA metabolic process;3.39317175123356e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.72058168575603e-07!GO:0048519;negative regulation of biological process;4.36132635357633e-07!GO:0030554;adenyl nucleotide binding;4.5338745433773e-07!GO:0051246;regulation of protein metabolic process;4.69982540192899e-07!GO:0044453;nuclear membrane part;4.72331667541279e-07!GO:0051187;cofactor catabolic process;4.72331667541279e-07!GO:0005524;ATP binding;5.94970071514019e-07!GO:0043687;post-translational protein modification;6.62273497459739e-07!GO:0006084;acetyl-CoA metabolic process;8.45847096868096e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.89439835321847e-07!GO:0001558;regulation of cell growth;1.00423778111263e-06!GO:0031252;leading edge;1.02614680101654e-06!GO:0009108;coenzyme biosynthetic process;1.09563183819375e-06!GO:0009109;coenzyme catabolic process;1.15794917999504e-06!GO:0032559;adenyl ribonucleotide binding;1.24263849454783e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.24297940921603e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.24297940921603e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.24297940921603e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.24836838060931e-06!GO:0015980;energy derivation by oxidation of organic compounds;1.60652967845022e-06!GO:0043038;amino acid activation;1.75558510920955e-06!GO:0006418;tRNA aminoacylation for protein translation;1.75558510920955e-06!GO:0043039;tRNA aminoacylation;1.75558510920955e-06!GO:0009117;nucleotide metabolic process;1.97208099623025e-06!GO:0016853;isomerase activity;2.09191783767004e-06!GO:0004298;threonine endopeptidase activity;2.1203333280398e-06!GO:0000139;Golgi membrane;2.17425866018711e-06!GO:0042981;regulation of apoptosis;2.18445744659567e-06!GO:0022402;cell cycle process;2.27468884378164e-06!GO:0000074;regulation of progression through cell cycle;2.65922505892355e-06!GO:0043067;regulation of programmed cell death;2.87152429433377e-06!GO:0051726;regulation of cell cycle;2.87748547749215e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.89137299781033e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.95546416525612e-06!GO:0031988;membrane-bound vesicle;2.99712691719935e-06!GO:0006366;transcription from RNA polymerase II promoter;2.99712691719935e-06!GO:0006752;group transfer coenzyme metabolic process;3.19130098214943e-06!GO:0043069;negative regulation of programmed cell death;3.24980045669411e-06!GO:0008654;phospholipid biosynthetic process;3.62234459281443e-06!GO:0043066;negative regulation of apoptosis;3.84955203515788e-06!GO:0045259;proton-transporting ATP synthase complex;4.44760926555734e-06!GO:0007005;mitochondrion organization and biogenesis;5.06685869837884e-06!GO:0045786;negative regulation of progression through cell cycle;6.18817086140013e-06!GO:0006364;rRNA processing;6.21733508778866e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.23391717887056e-06!GO:0005525;GTP binding;6.70765920202321e-06!GO:0009719;response to endogenous stimulus;6.98589078702328e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.52307780518462e-06!GO:0004386;helicase activity;8.39997185196504e-06!GO:0044262;cellular carbohydrate metabolic process;9.02907890246694e-06!GO:0008026;ATP-dependent helicase activity;9.29825622619038e-06!GO:0005798;Golgi-associated vesicle;9.52554604316864e-06!GO:0000245;spliceosome assembly;9.69048417866965e-06!GO:0031982;vesicle;9.79801736467076e-06!GO:0006916;anti-apoptosis;1.00096443517012e-05!GO:0016072;rRNA metabolic process;1.00839701282741e-05!GO:0031410;cytoplasmic vesicle;1.06899318097582e-05!GO:0006281;DNA repair;1.07726315351891e-05!GO:0043566;structure-specific DNA binding;1.12527906294066e-05!GO:0051789;response to protein stimulus;1.20781395831921e-05!GO:0006986;response to unfolded protein;1.20781395831921e-05!GO:0065002;intracellular protein transport across a membrane;1.31149901071177e-05!GO:0006613;cotranslational protein targeting to membrane;1.40715641441884e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.61986854466774e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.65555723529428e-05!GO:0003714;transcription corepressor activity;1.95080535534246e-05!GO:0045454;cell redox homeostasis;1.9579557096554e-05!GO:0032446;protein modification by small protein conjugation;2.22060685518384e-05!GO:0019843;rRNA binding;2.32931853027765e-05!GO:0016859;cis-trans isomerase activity;2.3329990363854e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.34994010083431e-05!GO:0030133;transport vesicle;2.44676433001063e-05!GO:0003697;single-stranded DNA binding;2.51187391886571e-05!GO:0005762;mitochondrial large ribosomal subunit;2.62756750043597e-05!GO:0000315;organellar large ribosomal subunit;2.62756750043597e-05!GO:0005643;nuclear pore;2.76664862231386e-05!GO:0019867;outer membrane;2.82061389647811e-05!GO:0050794;regulation of cellular process;3.16723698162619e-05!GO:0005769;early endosome;3.16723698162619e-05!GO:0016567;protein ubiquitination;3.21297879749861e-05!GO:0031968;organelle outer membrane;3.89921640540259e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.49030208074536e-05!GO:0000151;ubiquitin ligase complex;4.53772914013663e-05!GO:0032561;guanyl ribonucleotide binding;4.53772914013663e-05!GO:0019001;guanyl nucleotide binding;4.53772914013663e-05!GO:0051170;nuclear import;4.54474270710379e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;4.98166437870527e-05!GO:0030029;actin filament-based process;5.05748493338552e-05!GO:0030867;rough endoplasmic reticulum membrane;6.17533901301544e-05!GO:0005667;transcription factor complex;6.30869809970215e-05!GO:0005791;rough endoplasmic reticulum;6.77626599489313e-05!GO:0006606;protein import into nucleus;6.79819248451494e-05!GO:0000278;mitotic cell cycle;6.80290282133247e-05!GO:0008092;cytoskeletal protein binding;8.1090634368402e-05!GO:0031324;negative regulation of cellular metabolic process;8.11258773515471e-05!GO:0016787;hydrolase activity;8.26278295077834e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.79282846021892e-05!GO:0016564;transcription repressor activity;0.000102451582694306!GO:0006323;DNA packaging;0.000110117409541002!GO:0016126;sterol biosynthetic process;0.000116818740239094!GO:0040008;regulation of growth;0.000146211988009353!GO:0005741;mitochondrial outer membrane;0.00015420732948349!GO:0043021;ribonucleoprotein binding;0.00015859807707379!GO:0051427;hormone receptor binding;0.000159605333347359!GO:0000314;organellar small ribosomal subunit;0.000162645868201108!GO:0005763;mitochondrial small ribosomal subunit;0.000162645868201108!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000185619871201425!GO:0003713;transcription coactivator activity;0.000189902903725603!GO:0046930;pore complex;0.00020810854963121!GO:0004576;oligosaccharyl transferase activity;0.000260964802061629!GO:0050789;regulation of biological process;0.000266394504232264!GO:0009892;negative regulation of metabolic process;0.000268405867179957!GO:0006612;protein targeting to membrane;0.000272075140694876!GO:0046474;glycerophospholipid biosynthetic process;0.000290973885948621!GO:0003724;RNA helicase activity;0.000321835866775127!GO:0008250;oligosaccharyl transferase complex;0.000323735028646464!GO:0035257;nuclear hormone receptor binding;0.000325863702639873!GO:0016568;chromatin modification;0.000333975793674576!GO:0005905;coated pit;0.000351888245786114!GO:0016563;transcription activator activity;0.000352509892045304!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000376460768353269!GO:0016779;nucleotidyltransferase activity;0.000395090498702521!GO:0016740;transferase activity;0.000397702290567026!GO:0008610;lipid biosynthetic process;0.000413696602243451!GO:0005885;Arp2/3 protein complex;0.00043064447728331!GO:0006403;RNA localization;0.000436005231781494!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000459535331380303!GO:0050657;nucleic acid transport;0.000467329471175561!GO:0051236;establishment of RNA localization;0.000467329471175561!GO:0050658;RNA transport;0.000467329471175561!GO:0051276;chromosome organization and biogenesis;0.000511587608801281!GO:0005048;signal sequence binding;0.000541177513657652!GO:0007243;protein kinase cascade;0.000555494539734472!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000555494539734472!GO:0031902;late endosome membrane;0.000592482226253006!GO:0030663;COPI coated vesicle membrane;0.000595645855123638!GO:0030126;COPI vesicle coat;0.000595645855123638!GO:0018196;peptidyl-asparagine modification;0.000683183738700106!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000683183738700106!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000683183738700106!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000797094174158491!GO:0050662;coenzyme binding;0.000806924503164089!GO:0051920;peroxiredoxin activity;0.00086017321059524!GO:0001726;ruffle;0.000864434421896193!GO:0022890;inorganic cation transmembrane transporter activity;0.000864434421896193!GO:0065004;protein-DNA complex assembly;0.000897643210738641!GO:0006793;phosphorus metabolic process;0.000934677965059859!GO:0006796;phosphate metabolic process;0.000934677965059859!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00110684973109986!GO:0016044;membrane organization and biogenesis;0.00112397083771693!GO:0005774;vacuolar membrane;0.00145348574630562!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00149540541592233!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00149540541592233!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00149540541592233!GO:0006891;intra-Golgi vesicle-mediated transport;0.00162751237252821!GO:0046467;membrane lipid biosynthetic process;0.00163132835852904!GO:0016481;negative regulation of transcription;0.00164431658841606!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00164508571007083!GO:0043681;protein import into mitochondrion;0.00170674296635797!GO:0048522;positive regulation of cellular process;0.00178174497573726!GO:0046489;phosphoinositide biosynthetic process;0.00178764294651648!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00184679498540659!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00190660649893824!GO:0005813;centrosome;0.00192815810115154!GO:0006695;cholesterol biosynthetic process;0.00195468202644607!GO:0007010;cytoskeleton organization and biogenesis;0.00197080429968476!GO:0030137;COPI-coated vesicle;0.00204270443468483!GO:0031072;heat shock protein binding;0.002054322687792!GO:0009165;nucleotide biosynthetic process;0.00210435570382128!GO:0016310;phosphorylation;0.00216905208167884!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00216926094686475!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00217288935817415!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00218681545038208!GO:0006118;electron transport;0.00231671555018351!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00232340106432361!GO:0015399;primary active transmembrane transporter activity;0.00232340106432361!GO:0030027;lamellipodium;0.00232510108915859!GO:0006626;protein targeting to mitochondrion;0.00246778323854599!GO:0048500;signal recognition particle;0.00246967916177059!GO:0048471;perinuclear region of cytoplasm;0.00248817616588194!GO:0015630;microtubule cytoskeleton;0.0025569427055062!GO:0016197;endosome transport;0.0026718295606146!GO:0006979;response to oxidative stress;0.00271094233568532!GO:0030132;clathrin coat of coated pit;0.00277724853690815!GO:0007264;small GTPase mediated signal transduction;0.00278273059510747!GO:0043284;biopolymer biosynthetic process;0.00282185432027305!GO:0007050;cell cycle arrest;0.00302773347654094!GO:0051287;NAD binding;0.00306489944651532!GO:0030176;integral to endoplasmic reticulum membrane;0.00325634921169422!GO:0005694;chromosome;0.00326766645464643!GO:0016408;C-acyltransferase activity;0.00327358931642144!GO:0043623;cellular protein complex assembly;0.00354245965605683!GO:0005520;insulin-like growth factor binding;0.00368541318658628!GO:0015992;proton transport;0.00369126521618393!GO:0006818;hydrogen transport;0.00369350911017607!GO:0019899;enzyme binding;0.00373328438959194!GO:0006509;membrane protein ectodomain proteolysis;0.00376797379687207!GO:0033619;membrane protein proteolysis;0.00376797379687207!GO:0003690;double-stranded DNA binding;0.00411342459355971!GO:0008154;actin polymerization and/or depolymerization;0.00415262866481345!GO:0003899;DNA-directed RNA polymerase activity;0.00416108901189545!GO:0006414;translational elongation;0.00420389694433739!GO:0003729;mRNA binding;0.00424868382667183!GO:0044437;vacuolar part;0.00430638512394377!GO:0043488;regulation of mRNA stability;0.0043659247006988!GO:0043487;regulation of RNA stability;0.0043659247006988!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00436767390625429!GO:0004177;aminopeptidase activity;0.00444262937532555!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00444262937532555!GO:0015002;heme-copper terminal oxidase activity;0.00444262937532555!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00444262937532555!GO:0004129;cytochrome-c oxidase activity;0.00444262937532555!GO:0005765;lysosomal membrane;0.00446440619766012!GO:0006650;glycerophospholipid metabolic process;0.00454219058909637!GO:0008186;RNA-dependent ATPase activity;0.00455297175015639!GO:0006333;chromatin assembly or disassembly;0.00476639048474172!GO:0051028;mRNA transport;0.00482537512515452!GO:0030041;actin filament polymerization;0.00520761503594384!GO:0030658;transport vesicle membrane;0.00529890586352688!GO:0005815;microtubule organizing center;0.0054120511545768!GO:0042802;identical protein binding;0.00549559837170286!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00549984494221023!GO:0006383;transcription from RNA polymerase III promoter;0.00555350908236953!GO:0005869;dynactin complex;0.00561737587700346!GO:0006260;DNA replication;0.0056981415502707!GO:0051252;regulation of RNA metabolic process;0.00585043927539448!GO:0030134;ER to Golgi transport vesicle;0.00586311551272895!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00586311551272895!GO:0045047;protein targeting to ER;0.00586311551272895!GO:0019752;carboxylic acid metabolic process;0.00599757388666781!GO:0006082;organic acid metabolic process;0.0061927820298847!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00622074046396695!GO:0030880;RNA polymerase complex;0.00640779045474726!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00661226280512924!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00661226280512924!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0069148670204249!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0069148670204249!GO:0007040;lysosome organization and biogenesis;0.007032715553857!GO:0006007;glucose catabolic process;0.00708375391954244!GO:0030118;clathrin coat;0.00723463003172922!GO:0016363;nuclear matrix;0.00745066717007143!GO:0031901;early endosome membrane;0.00760253295668399!GO:0006839;mitochondrial transport;0.00771000224490359!GO:0030521;androgen receptor signaling pathway;0.00771000224490359!GO:0006740;NADPH regeneration;0.00796767125814332!GO:0006098;pentose-phosphate shunt;0.00796767125814332!GO:0035258;steroid hormone receptor binding;0.00801410824902804!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00823815252046703!GO:0045045;secretory pathway;0.00865500723238719!GO:0030127;COPII vesicle coat;0.00865519479467843!GO:0012507;ER to Golgi transport vesicle membrane;0.00865519479467843!GO:0008180;signalosome;0.0087286504193493!GO:0007034;vacuolar transport;0.00876454551439316!GO:0009967;positive regulation of signal transduction;0.0088493041285137!GO:0008312;7S RNA binding;0.00887039103152022!GO:0005975;carbohydrate metabolic process;0.00888744756690419!GO:0007006;mitochondrial membrane organization and biogenesis;0.00897687358972365!GO:0007033;vacuole organization and biogenesis;0.00904895044351923!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00923599223478753!GO:0051540;metal cluster binding;0.00952324954322071!GO:0051536;iron-sulfur cluster binding;0.00952324954322071!GO:0051128;regulation of cellular component organization and biogenesis;0.00978724948317269!GO:0017166;vinculin binding;0.00978724948317269!GO:0000785;chromatin;0.0103329512076768!GO:0051087;chaperone binding;0.0105466765959265!GO:0045792;negative regulation of cell size;0.0106263409205214!GO:0051329;interphase of mitotic cell cycle;0.0106786829672747!GO:0004004;ATP-dependent RNA helicase activity;0.0107791414029803!GO:0031529;ruffle organization and biogenesis;0.0111744755735105!GO:0008047;enzyme activator activity;0.0113095402482545!GO:0006790;sulfur metabolic process;0.0114318214008026!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.011760920536568!GO:0046483;heterocycle metabolic process;0.0118366359721849!GO:0043022;ribosome binding;0.0120252636426665!GO:0030308;negative regulation of cell growth;0.0123394659736456!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0124462009929468!GO:0000428;DNA-directed RNA polymerase complex;0.0124462009929468!GO:0051539;4 iron, 4 sulfur cluster binding;0.0124532462538201!GO:0006778;porphyrin metabolic process;0.0126379440239437!GO:0033013;tetrapyrrole metabolic process;0.0126379440239437!GO:0046519;sphingoid metabolic process;0.0130146435902835!GO:0003746;translation elongation factor activity;0.0130317337562298!GO:0043492;ATPase activity, coupled to movement of substances;0.0130368213044857!GO:0031418;L-ascorbic acid binding;0.0131578791296038!GO:0048037;cofactor binding;0.0131863221386612!GO:0030384;phosphoinositide metabolic process;0.0133582762362587!GO:0044427;chromosomal part;0.0135864271520348!GO:0033673;negative regulation of kinase activity;0.0137340593803174!GO:0006469;negative regulation of protein kinase activity;0.0137340593803174!GO:0030660;Golgi-associated vesicle membrane;0.0142318033039598!GO:0006892;post-Golgi vesicle-mediated transport;0.0145759711175924!GO:0019798;procollagen-proline dioxygenase activity;0.0146490616248705!GO:0031543;peptidyl-proline dioxygenase activity;0.0151300378386732!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0151520917811985!GO:0000339;RNA cap binding;0.0151754224292258!GO:0006402;mRNA catabolic process;0.0152163058372252!GO:0048487;beta-tubulin binding;0.0152615893645503!GO:0000087;M phase of mitotic cell cycle;0.015476108114865!GO:0016860;intramolecular oxidoreductase activity;0.0158940464933306!GO:0015629;actin cytoskeleton;0.0159365527562161!GO:0048468;cell development;0.0159937719161468!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0163648772659295!GO:0005862;muscle thin filament tropomyosin;0.0166374936533251!GO:0007067;mitosis;0.0171876432624064!GO:0030032;lamellipodium biogenesis;0.0173744217537852!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0177317311935042!GO:0030145;manganese ion binding;0.0181119380920725!GO:0005684;U2-dependent spliceosome;0.0181181760150366!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0181231006465149!GO:0006352;transcription initiation;0.018193583056687!GO:0042158;lipoprotein biosynthetic process;0.018614982496544!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.018614982496544!GO:0003756;protein disulfide isomerase activity;0.018614982496544!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.018614982496544!GO:0015631;tubulin binding;0.0186685902741653!GO:0065009;regulation of a molecular function;0.0188319370823966!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0188344859199164!GO:0016251;general RNA polymerase II transcription factor activity;0.0188344859199164!GO:0000059;protein import into nucleus, docking;0.0188344859199164!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0189545515841318!GO:0006354;RNA elongation;0.0191253960366292!GO:0044452;nucleolar part;0.019267177322844!GO:0006506;GPI anchor biosynthetic process;0.0195799599062627!GO:0051348;negative regulation of transferase activity;0.0198961472722415!GO:0006643;membrane lipid metabolic process;0.0200213796116209!GO:0000902;cell morphogenesis;0.0200213796116209!GO:0032989;cellular structure morphogenesis;0.0200213796116209!GO:0007041;lysosomal transport;0.0200497793211402!GO:0003779;actin binding;0.0200497793211402!GO:0008632;apoptotic program;0.0203575657368314!GO:0006497;protein amino acid lipidation;0.0205111584909457!GO:0007160;cell-matrix adhesion;0.021129872665029!GO:0051168;nuclear export;0.021877916205176!GO:0016272;prefoldin complex;0.0219712035054827!GO:0005832;chaperonin-containing T-complex;0.0220784942367989!GO:0035035;histone acetyltransferase binding;0.0221615853995581!GO:0006672;ceramide metabolic process;0.0222138970510127!GO:0051325;interphase;0.0223596491602178!GO:0065007;biological regulation;0.0223697132647471!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0228856638385037!GO:0042168;heme metabolic process;0.0231435934728941!GO:0000209;protein polyubiquitination;0.0231692763905085!GO:0003711;transcription elongation regulator activity;0.0232602332053191!GO:0050811;GABA receptor binding;0.0233394119903602!GO:0050681;androgen receptor binding;0.0234329064660378!GO:0006607;NLS-bearing substrate import into nucleus;0.0235389575700092!GO:0008139;nuclear localization sequence binding;0.0235389575700092!GO:0048518;positive regulation of biological process;0.0238809685785748!GO:0031589;cell-substrate adhesion;0.0238948881077165!GO:0030125;clathrin vesicle coat;0.0239148340570596!GO:0030665;clathrin coated vesicle membrane;0.0239148340570596!GO:0005096;GTPase activator activity;0.0243094997612318!GO:0006505;GPI anchor metabolic process;0.0243256964425553!GO:0016125;sterol metabolic process;0.02446954336662!GO:0000096;sulfur amino acid metabolic process;0.0248508086401207!GO:0006595;polyamine metabolic process;0.0249464321689812!GO:0006693;prostaglandin metabolic process;0.0253581033310301!GO:0006692;prostanoid metabolic process;0.0253581033310301!GO:0033559;unsaturated fatty acid metabolic process;0.0255623333338758!GO:0006636;unsaturated fatty acid biosynthetic process;0.0255623333338758!GO:0022403;cell cycle phase;0.0256640452912131!GO:0000049;tRNA binding;0.0280993954791617!GO:0051301;cell division;0.0284961060118485!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0285059466325505!GO:0030508;thiol-disulfide exchange intermediate activity;0.0286749777587633!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0288292024225285!GO:0033043;regulation of organelle organization and biogenesis;0.0288292024225285!GO:0008033;tRNA processing;0.0294234614580751!GO:0030984;kininogen binding;0.0298827715988618!GO:0004213;cathepsin B activity;0.0298827715988618!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0305456409281833!GO:0006767;water-soluble vitamin metabolic process;0.0312759616183087!GO:0032940;secretion by cell;0.0312759616183087!GO:0006739;NADP metabolic process;0.0313449078240807!GO:0030503;regulation of cell redox homeostasis;0.0315321247269846!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0321487104786333!GO:0030659;cytoplasmic vesicle membrane;0.0321487104786333!GO:0030119;AP-type membrane coat adaptor complex;0.0324222998516516!GO:0001872;zymosan binding;0.0328104022674158!GO:0001878;response to yeast;0.0328104022674158!GO:0030518;steroid hormone receptor signaling pathway;0.0330844730456454!GO:0015036;disulfide oxidoreductase activity;0.033314699513622!GO:0007021;tubulin folding;0.0334744141842899!GO:0004287;prolyl oligopeptidase activity;0.0335113347926736!GO:0008147;structural constituent of bone;0.0335525250982617!GO:0009225;nucleotide-sugar metabolic process;0.0337210559195977!GO:0006779;porphyrin biosynthetic process;0.0344597183306619!GO:0033014;tetrapyrrole biosynthetic process;0.0344597183306619!GO:0005586;collagen type III;0.0347265188700054!GO:0008064;regulation of actin polymerization and/or depolymerization;0.035866426503169!GO:0006289;nucleotide-excision repair;0.0365625546670266!GO:0008168;methyltransferase activity;0.0366610075396199!GO:0043065;positive regulation of apoptosis;0.0373747593204939!GO:0004228;gelatinase A activity;0.0377989333739693!GO:0001955;blood vessel maturation;0.0377989333739693!GO:0005801;cis-Golgi network;0.0380481443222738!GO:0005100;Rho GTPase activator activity;0.0380481443222738!GO:0045892;negative regulation of transcription, DNA-dependent;0.0391255862887401!GO:0003684;damaged DNA binding;0.0394973991589405!GO:0051272;positive regulation of cell motility;0.0395511189666574!GO:0040017;positive regulation of locomotion;0.0395511189666574!GO:0046365;monosaccharide catabolic process;0.0407500569667021!GO:0019222;regulation of metabolic process;0.0409790537454495!GO:0005583;fibrillar collagen;0.0412001694025637!GO:0006401;RNA catabolic process;0.0415110096230666!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0416120596041819!GO:0006769;nicotinamide metabolic process;0.0417948508994521!GO:0019318;hexose metabolic process;0.0419989166655143!GO:0006334;nucleosome assembly;0.0422967455174842!GO:0006644;phospholipid metabolic process;0.042417987870025!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0425374296713512!GO:0008538;proteasome activator activity;0.0430067123911114!GO:0005637;nuclear inner membrane;0.0430067123911114!GO:0045893;positive regulation of transcription, DNA-dependent;0.0430133159093974!GO:0043414;biopolymer methylation;0.0435130671159994!GO:0043068;positive regulation of programmed cell death;0.0435668587117565!GO:0016741;transferase activity, transferring one-carbon groups;0.043725572123842!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.04412355799305!GO:0031371;ubiquitin conjugating enzyme complex;0.044679270445859!GO:0005996;monosaccharide metabolic process;0.0447736089687062!GO:0048144;fibroblast proliferation;0.0448472411611666!GO:0048145;regulation of fibroblast proliferation;0.0448472411611666!GO:0007030;Golgi organization and biogenesis;0.0457655246947151!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0459256441073973!GO:0030911;TPR domain binding;0.0460839935597939!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0462214900192097!GO:0044255;cellular lipid metabolic process;0.0477300670898248!GO:0031124;mRNA 3'-end processing;0.0479450269773345!GO:0003923;GPI-anchor transamidase activity;0.0479450269773345!GO:0016255;attachment of GPI anchor to protein;0.0479450269773345!GO:0042765;GPI-anchor transamidase complex;0.0479450269773345!GO:0030199;collagen fibril organization;0.0482671388992209!GO:0022408;negative regulation of cell-cell adhesion;0.0489922238397928!GO:0006733;oxidoreduction coenzyme metabolic process;0.0491919283678194!GO:0044275;cellular carbohydrate catabolic process;0.0492669684445804!GO:0008022;protein C-terminus binding;0.049678495925829
+|sample_id=11751
+|sample_note=
+|sample_sex=
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=bone marrow
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+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11751-123G5;search_select_hide=table117:FF:11751-123G5
 }}

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FF:11751-123G5: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:17, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0