FF:11491-119E6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005782 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005782 | ||
|accession_numbers=CAGE;DRX008396;DRR009268;DRZ000693;DRZ002078;DRZ012043;DRZ013428 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037003;DRR041369;DRZ007011 | |||
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002320,CL:0002371,CL:0000183,CL:0000630,CL:0000255,CL:0000669,CL:0002575 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000133 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr13:100634031..100634045,+!p1@ZIC2!2.39!246.51!ZIC2;;chr3:147127142..147127168,+!p1@ZIC1!2.18!150.57!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!2.15!140.19!ZIC1;;chr2:19558373..19558392,-!p1@OSR1!2.02!272.95!OSR1;;chr19:46800289..46800327,+!p2@HIF3A!1.98!94.38!HIF3A;;chr5:72744445..72744466,-!p2@FOXD1!1.70!80.67!FOXD1;;chr14:61116183..61116208,-!p1@SIX1!1.69!175.05!SIX1;;chr5:92918919..92918942,+!p1@NR2F1!1.68!199.13!NR2F1;;chr5:72743793..72743855,-!p4@FOXD1!1.67!53.26!FOXD1;;chr13:100634004..100634025,+!p2@ZIC2!1.67!45.82!ZIC2;;chr3:147111231..147111281,+!p3@ZIC1!1.64!42.68!ZIC1;;chr5:72744594..72744609,-!p1@FOXD1!1.63!181.12!FOXD1;;chr6:85474299..85474324,-!p1@TBX18!1.57!63.83!TBX18;;chr2:45236540..45236577,-!p1@SIX2!1.57!35.83!SIX2;;chr12:54772960..54773015,-!p3@ZNF385A!1.56!164.47!ZNF385A;;chr16:86600426..86600441,+!p1@FOXC2!1.53!79.10!FOXC2;;chr17:1959369..1959388,+!p2@HIC1!1.47!73.62!HIC1;;chr13:100634130..100634143,+!p3@ZIC2!1.47!28.39!ZIC2;;chr5:72744336..72744359,-!p5@FOXD1!1.46!27.61!FOXD1;;chr7:19157248..19157268,-!p1@TWIST1!1.43!70.88!TWIST1;;chr5:72744562..72744573,-!p3@FOXD1!1.41!30.74!FOXD1;;chr3:147139053..147139112,+!p5@ZIC1!1.40!24.28!ZIC1;;chr7:44143925..44143970,+!p1@AEBP1!1.39!506.93!AEBP1;;chr20:39317868..39317884,-!p1@MAFB!1.39!269.42!MAFB;;chr15:96874145..96874166,+!p7@NR2F2!1.39!45.03!NR2F2;;chr17:59477233..59477263,+!p1@TBX2!1.38!70.29!TBX2;;chr13:100638100..100638115,+!p4@ZIC2!1.35!21.34!ZIC2;;chr19:46801639..46801699,+!p1@HIF3A!1.32!19.97!HIF3A;;chr12:54785054..54785072,-!p4@ZNF385A!1.31!22.13!ZNF385A;;chr2:45236579..45236596,-!p2@SIX2!1.31!19.19!SIX2;;chr15:96874012..96874042,+!p2@NR2F2!1.30!166.24!NR2F2;;chr15:96873984..96873999,+!p3@NR2F2!1.30!134.52!NR2F2;;chr11:61520075..61520136,+!p1@C11orf9!1.29!38.96!C11orf9;;chr7:19157043..19157088,-!p2@TWIST1!1.26!42.49!TWIST1;;chr6:1610293..1610310,+!p1@FOXC1!1.26!28.59!FOXC1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.26!18.21!GLIS1;;chr2:85981222..85981259,+!p2@ATOH8!1.25!27.41!ATOH8;;chr6:1389789..1389821,+!p1@FOXF2!1.25!22.91!FOXF2;;chr19:46806868..46806883,+!p3@HIF3A!1.24!16.45!HIF3A;;chr16:86600870..86600921,+!p2@FOXC2!1.24!16.25!FOXC2;;chr8:49833948..49833973,-!p2@SNAI2!1.23!100.05!SNAI2;;chr7:150946015..150946070,-!p3@SMARCD3!1.23!34.27!SMARCD3;;chr6:126070769..126070801,+!p1@HEY2!1.23!18.60!HEY2;;chr12:54778471..54778528,-!p1@ZNF385A!1.22!15.66!ZNF385A;;chr3:147124307..147124336,-!p2@ZIC4!1.19!14.49!ZIC4;;chr2:85981107..85981120,+!p3@ATOH8!1.17!13.71!ATOH8;;chr17:1958388..1958404,+!p1@HIC1!1.15!82.43!HIC1;;chr11:46299199..46299233,+!p1@CREB3L1!1.15!68.14!CREB3L1;;chr14:21994337..21994442,-!p1@SALL2!1.15!36.22!SALL2;;chr15:96874927..96874938,+!p8@NR2F2!1.13!26.82!NR2F2;;chr3:147114260..147114290,-!p3@ZIC4!1.13!12.53!ZIC4;;chr3:147127489..147127503,+!p11@ZIC1!1.13!12.34!ZIC1;;chr12:54785074..54785122,-!p2@ZNF385A!1.12!18.99!ZNF385A;;chr21:47063625..47063658,+!p1@PCBP3!1.11!51.50!PCBP3;;chr15:96874244..96874259,+!p5@NR2F2!1.11!28.78!NR2F2;;chr7:44143978..44143989,+!p2@AEBP1!1.11!21.93!AEBP1;;chr2:121493425..121493474,+!p1@GLI2!1.10!25.45!GLI2;;chr19:45260775..45260838,+!p5@BCL3!1.09!14.88!BCL3;;chr6:134210243..134210257,+!p1@TCF21!1.09!11.36!TCF21;;chr16:79633894..79633954,-!p3@MAF!1.08!21.15!MAF;;chr3:147123837..147123848,-!p7@ZIC4!1.08!11.16!ZIC4;;chr3:147111317..147111328,+!p8@ZIC1!1.07!10.77!ZIC1;;chr12:57522813..57522825,-!p10@STAT6!1.07!10.77!STAT6;;chr17:59477197..59477212,+!p2@TBX2!1.06!18.21!TBX2;;chr4:4861385..4861398,+!p1@MSX1!1.05!30.94!MSX1;;chr14:61116168..61116180,-!p2@SIX1!1.04!11.36!SIX1;;chr16:79634624..79634642,-!p1@MAF!1.03!38.38!MAF;;chr15:80696703..80696754,+!p1@ARNT2!1.03!13.12!ARNT2;;chr5:92919100..92919135,+!p3@NR2F1!1.02!11.55!NR2F1;;chr5:92918894..92918912,+!p2@NR2F1!1.01!30.54!NR2F1;;chr12:66218183..66218209,+!p4@HMGA2!1.01!18.21!HMGA2;;chr7:44143997..44144008,+!p3@AEBP1!1.01!11.75!AEBP1;;chr11:47279248..47279264,+!p3@NR1H3!1.00!10.18!NR1H3;;chr15:80843484..80843499,+!p5@ARNT2!1.00!9.01!ARNT2;;chr16:8962202..8962222,-!p3@CARHSP1!0.99!15.66!CARHSP1;;chr13:100623375..100623425,-!p1@ZIC5!0.99!8.81!ZIC5;;chr8:48650715..48650735,-!p1@CEBPD!0.98!1117.24!CEBPD;;chr15:96873921..96873946,+!p1@NR2F2!0.98!245.53!NR2F2;;chr5:158526917..158526932,-!p1@EBF1!0.98!21.54!EBF1;;chr15:96874216..96874236,+!p13@NR2F2!0.98!13.51!NR2F2;;chr16:86544113..86544145,+!p1@FOXF1!0.98!10.57!FOXF1;;chr5:92919068..92919082,+!p5@NR2F1!0.98!10.38!NR2F1;;chr8:49833978..49833996,-!p1@SNAI2!0.96!171.33!SNAI2;;chr17:46671108..46671147,-!p1@HOXB5!0.96!8.03!HOXB5;;chr22:42229246..42229270,+!p2@SREBF2!0.95!103.38!SREBF2;;chr12:57504975..57505019,-!p2@STAT6!0.95!32.89!STAT6;;chr3:147111198..147111225,+!p4@ZIC1!0.95!7.83!ZIC1;;chr3:147111285..147111298,+!p10@ZIC1!0.94!7.64!ZIC1;;chr14:24837368..24837401,+!p1@NFATC4!0.93!18.21!NFATC4;;chr17:59477275..59477286,+!p3@TBX2!0.93!10.18!TBX2;;chr16:86600458..86600461,+!p3@FOXC2!0.93!7.44!FOXC2;;chr11:125034605..125034636,+!p2@PKNOX2!0.93!7.44!PKNOX2;;chrY:21906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AD4!0.36!3.72!TEAD4;;chr1:249132608..249132628,+!p5@ZNF672!0.36!2.94!ZNF672;;chr6:45389835..45389861,+!p7@RUNX2!0.36!2.55!RUNX2;;chr16:30583169..30583200,-!p2@ZNF688!0.36!2.35!ZNF688;;chr14:24025106..24025172,-!p2@ZFHX2!0.36!1.96!ZFHX2;;chr5:124082580..124082603,-!p4@ZNF608!0.36!1.57!ZNF608;;chr16:31128978..31129002,+!p1@KAT8!0.35!97.90!KAT8;;chr17:80477571..80477637,+!p1@FOXK2!0.35!60.70!FOXK2;;chr11:65430402..65430431,-!p2@RELA!0.35!52.28!RELA;;chr16:31085714..31085783,+!p1@ZNF646!0.35!32.89!ZNF646;;chr19:17356697..17356762,-!p1@NR2F6!0.35!27.22!NR2F6;;chr1:161015706..161015747,-!p1@USF1!0.35!23.89!USF1;;chr1:247495140..247495177,-!p1@ZNF496!0.35!21.34!ZNF496;;chr16:4817129..4817198,-!p1@ZNF500!0.35!10.57!ZNF500;;chr11:62369352..62369373,-!p5@MTA2!0.35!7.24!MTA2;;chr15:66994663..66994680,+!p1@SMAD6!0.35!4.11!SMAD6;;chr2:46524474..46524491,+!p4@EPAS1!0.35!4.11!EPAS1;;chr20:48807091..48807123,+!p7@CEBPB!0.35!3.72!CEBPB;;chr20:48807171..48807234,+!p4@CEBPB!0.35!3.72!CEBPB;;chr9:116638634..116638664,+!p2@ZNF618!0.35!3.13!ZNF618;;chr14:61191049..61191080,-!p2@SIX4!0.35!2.74!SIX4;;chr19:3572908..3572917,+!p3@HMG20B!0.35!2.74!HMG20B;;chr16:3185051..3185068,+!p3@ZNF213!0.35!2.55!ZNF213;;chr17:41623009..41623053,-!p4@ETV4!0.35!2.55!ETV4;;chr17:61919812..61919833,-!p6@SMARCD2!0.35!1.76!SMARCD2;;chr17:53342311..53342400,+!p1@HLF!0.35!1.57!HLF;;chr14:69259772..69259790,-!p1@ZFP36L1!0.34!201.87!ZFP36L1;;chr22:41697520..41697613,+!p1@ZC3H7B!0.34!112.59!ZC3H7B;;chr19:19302931..19302974,-!p1@MEF2BNB-MEF2B,p1@MEF2BNB,p1@MEF2B!0.34!49.15!MEF2B;;chr19:19516561..19516644,+!p1@GATAD2A!0.34!41.71!GATAD2A;;chr14:65569244..65569264,-!p2@MAX!0.34!22.32!MAX;;chr19:55987963..55987996,+!p1@ZNF628!0.34!14.10!ZNF628;;chr1:154975258..154975330,+!p1@ZBTB7B!0.34!6.66!ZBTB7B;;chr19:46272106..46272115,-!p3@SIX5!0.34!4.70!SIX5;;chr9:137218362..137218385,+!p4@RXRA!0.34!4.50!RXRA;;chr17:17723626..17723663,-!p4@SREBF1!0.34!3.33!SREBF1;;chr2:242576946..242576996,-!p4@THAP4!0.34!3.13!THAP4;;chr15:96869222..96869251,+!p18@NR2F2!0.34!1.57!NR2F2;;chr15:96877425..96877441,+!p32@NR2F2!0.34!1.17!NR2F2;;chr16:86612174..86612188,+!p4@FOXL1!0.34!1.17!FOXL1;;chr17:59477266..59477273,+!p6@TBX2!0.34!1.17!TBX2;;chr18:42260920..42260951,+!p4@SETBP1!0.34!1.17!SETBP1;;chr2:45236648..45236659,-!p5@SIX2!0.34!1.17!SIX2;;chr3:25469815..25469866,+!p3@RARB!0.34!1.17!RARB;;chr3:25470156..25470227,+!p2@RARB!0.34!1.17!RARB;;chr4:109089901..109089930,-!p3@LEF1!0.34!1.17!LEF1;;chr4:174451370..174451387,-!p1@HAND2!0.34!1.17!HAND2;;chr4:57522674..57522699,-!p5@HOPX!0.34!1.17!HOPX;;chr9:16728161..16728185,-!p4@BNC2!0.34!1.17!BNC2;;chrX:136648643..136648711,+!p2@ZIC3!0.34!1.17!ZIC3;;chr5:92920719..92920744,+!p17@NR2F1,p31@NR2F2!0.34!1.17!NR2F1;;chr7:150945865..150945896,-!p4@SMARCD3!0.34!1.17!SMARCD3;;chr8:128750164..128750173,+!p24@MYC!0.34!1.17!MYC;;chr19:47910182..47910187,-!p3@MEIS3!0.34!1.17!MEIS3;;chr19:58545454..58545498,+!p1@ZSCAN1!0.34!1.17!ZSCAN1;;chr1:110613238..110613272,-!p1@ALX3!0.34!1.17!ALX3;;chr11:46333883..46333900,+!p8@CREB3L1!0.34!1.17!CREB3L1;;chr11:46333934..46333963,+!p5@CREB3L1!0.34!1.17!CREB3L1;;chr12:114845810..114845824,-!p1@TBX5!0.34!1.17!TBX5;;chr12:124873824..124873833,-!p19@NCOR2!0.34!1.17!NCOR2;;chr12:57853596..57853613,+!p3@GLI1!0.34!1.17!GLI1;;chr12:85674018..85674039,+!p3@ALX1!0.34!1.17!ALX1;;chr13:100623360..100623373,-!p2@ZIC5!0.34!1.17!ZIC5;;chr14:61190359..61190385,-!p4@SIX4!0.34!1.17!SIX4;;chr1:26496382..26496457,+!p1@ZNF593!0.33!116.89!ZNF593;;chr8:103667935..103667960,-!p1@KLF10!0.33!86.94!KLF10;;chr19:3366570..3366619,+!p1@NFIC!0.33!61.68!NFIC;;chr14:21945335..21945419,+!p1@TOX4!0.33!49.93!TOX4;;chr12:57916584..57916682,+!p1@MBD6!0.33!38.38!MBD6;;chr6:35464817..35464894,-!p1@TEAD3!0.33!29.37!TEAD3;;chr6:144329384..144329405,-!p1@PLAGL1!0.33!21.93!PLAGL1;;chr19:42724436..42724507,+!p1@ZNF526!0.33!15.47!ZNF526;;chr8:144329092..144329140,+!p1@ZFP41!0.33!13.31!ZFP41;;chr15:85144229..85144273,+!p1@ZSCAN2!0.33!9.79!ZSCAN2;;chr16:71918033..71918101,-!p1@ZNF821!0.33!6.46!ZNF821;;chr15:67357992..67358009,+!p3@SMAD3!0.33!3.92!SMAD3;;chr11:64073006..64073017,+!p3@ESRRA!0.33!3.72!ESRRA;;chr1:8483821..8483845,-!p11@RERE!0.33!3.13!RERE;;chr15:42749722..42749739,-!p2@ZFP106!0.33!2.74!ZFP106;;chr19:44037334..44037365,+!p2@ZNF575!0.33!2.15!ZNF575;;chr7:6655225..6655279,+!p1@ENST00000457543!0.33!2.15!ZNF853;;chr19:12175504..12175519,+!p2@ZNF844!0.33!1.96!ZNF844;;chr4:103422232..103422241,+!p6@NFKB1!0.33!1.57!NFKB1;;chr1:8938736..8938756,-!p1@ENO1!0.32!2081.37!ENO1;;chr17:46125707..46125746,+!p2@NFE2L1!0.32!99.66!NFE2L1;;chr12:132628963..132629027,+!p1@NOC4L!0.32!27.41!NOC4L;;chr19:20844368..20844407,-!p1@ZNF626!0.32!26.04!ZNF626;;chr19:36208877..36208919,+!p1@MLL4!0.32!23.69!MLL4;;chr16:3162557..3162600,+!p1@ZNF205!0.32!15.47!ZNF205;;chr16:58034520..58034622,-!p@chr16:58034520..58034622,-!0.32!14.10!ZNF319;;chr16:4322832..4322907,-!p1@TFAP4!0.32!13.90!TFAP4;;chr2:10183651..10183713,+!p1@KLF11!0.32!13.31!KLF11;;chr11:65686952..65686975,+!p5@DRAP1!0.32!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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000630;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000669 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 34: | Line 43: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Pericytes%252c%2520donor1.CNhs11317.11491-119E6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Pericytes%252c%2520donor1.CNhs11317.11491-119E6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Pericytes%252c%2520donor1.CNhs11317.11491-119E6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Pericytes%252c%2520donor1.CNhs11317.11491-119E6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Pericytes%252c%2520donor1.CNhs11317.11491-119E6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11491-119E6 | |id=FF:11491-119E6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000133 | ||
|is_obsolete= | |||
|library_id=CNhs11317 | |||
|library_id_phase_based=2:CNhs11317 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11491 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10002.CCGTCC.11491 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11491 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10002.CCGTCC.11491 | |||
|name=Pericytes, donor1 | |name=Pericytes, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 41: | Line 64: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11317,LSID767,release009,COMPLETED | |profile_hcage=CNhs11317,LSID767,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10002,,, | |profile_srnaseq=SRhi10002,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.0168028875629142,0,0.0600585789640377,-0.156802969046517,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.0878009992655527,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.200687325974275,0,0.137757433569215,0.0776589694549609,-0.0969923612426051,0,0,-0.019684657758136,0,0,0,0,0,0,0,0,0.0776589694549609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.055545935572767,0.0218612701204728,0,0,0,0.0192121426431357,0.0863862623038425,0,0.25120118306085,0,0,-0.0203763817827455,-0.138477200800895,0,0,0,0.0776589694549609,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0575441091949805,0,0,0,-0.00749697791456982,0.0116371516487101,0,0,0,0,0,0 | |||
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| |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number=SC1205 | |rna_catalog_number=SC1205 | ||
Line 53: | Line 79: | ||
|rna_rin=9.4 | |rna_rin=9.4 | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.19E+08 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10002.CCGTCC | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=lot:3303 | |sample_cell_catalog=lot:3303 | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 68: | Line 96: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.54419658830307e-225!GO:0005737;cytoplasm;2.81656210393417e-163!GO:0043231;intracellular membrane-bound organelle;1.01217292832667e-151!GO:0043227;membrane-bound organelle;1.89438232066406e-151!GO:0043226;organelle;3.52025400749713e-151!GO:0043229;intracellular organelle;5.31742229375418e-151!GO:0044444;cytoplasmic part;1.00339120862735e-123!GO:0044422;organelle part;6.01334716972755e-96!GO:0044446;intracellular organelle part;7.40273840643302e-95!GO:0005739;mitochondrion;8.26961936304699e-67!GO:0044238;primary metabolic process;1.57211731408749e-65!GO:0044237;cellular metabolic process;5.26328040384814e-65!GO:0032991;macromolecular complex;1.09318139100704e-62!GO:0030529;ribonucleoprotein complex;3.58292851879093e-62!GO:0005515;protein binding;2.77509246485019e-59!GO:0043170;macromolecule metabolic process;1.71755174220643e-56!GO:0043233;organelle lumen;4.55488572806924e-51!GO:0031974;membrane-enclosed lumen;4.55488572806924e-51!GO:0005634;nucleus;4.09360754334147e-49!GO:0031090;organelle membrane;1.06515972833017e-44!GO:0044429;mitochondrial part;2.91579350538102e-44!GO:0003723;RNA binding;4.54066442429814e-44!GO:0005840;ribosome;9.55421815677936e-44!GO:0044428;nuclear part;9.96520471224759e-40!GO:0003735;structural constituent of ribosome;1.7735946662933e-39!GO:0009058;biosynthetic process;9.59255402587133e-39!GO:0006412;translation;1.72177787790671e-36!GO:0044249;cellular biosynthetic process;5.57980160324894e-35!GO:0033279;ribosomal subunit;5.82419460411658e-35!GO:0019538;protein metabolic process;1.28972938045725e-34!GO:0016043;cellular component organization and biogenesis;1.59299146386274e-33!GO:0031967;organelle envelope;2.46663884290103e-33!GO:0031975;envelope;4.29343322012714e-33!GO:0015031;protein transport;2.46121688840248e-31!GO:0009059;macromolecule biosynthetic process;7.89836220391199e-31!GO:0010467;gene expression;1.21964719570587e-30!GO:0044260;cellular macromolecule metabolic process;1.7017270477974e-30!GO:0033036;macromolecule localization;1.81762138936857e-30!GO:0005740;mitochondrial envelope;1.82398382302895e-30!GO:0043234;protein complex;4.53260799025331e-30!GO:0044267;cellular protein metabolic process;7.03663324433545e-30!GO:0005829;cytosol;1.10735223248745e-29!GO:0043283;biopolymer metabolic process;3.18050993494287e-29!GO:0045184;establishment of protein localization;6.99660182692057e-29!GO:0031966;mitochondrial membrane;8.16051894307079e-29!GO:0008104;protein localization;8.16051894307079e-29!GO:0006396;RNA processing;8.95188073872957e-28!GO:0019866;organelle inner membrane;1.94413703917727e-27!GO:0031981;nuclear lumen;5.12330753887277e-27!GO:0005743;mitochondrial inner membrane;1.26062804460068e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.07167534225093e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.92883160473165e-25!GO:0016071;mRNA metabolic process;1.69616975675777e-23!GO:0046907;intracellular transport;7.16803589994482e-23!GO:0008380;RNA splicing;4.88083588002223e-21!GO:0006996;organelle organization and biogenesis;5.78759524118126e-21!GO:0006119;oxidative phosphorylation;3.35984175201664e-20!GO:0065003;macromolecular complex assembly;8.75012876651701e-20!GO:0044445;cytosolic part;9.12202707117021e-20!GO:0006886;intracellular protein transport;9.53703973142999e-20!GO:0006397;mRNA processing;2.19331091873509e-19!GO:0044455;mitochondrial membrane part;5.65761359702176e-19!GO:0005783;endoplasmic reticulum;4.01687752133524e-18!GO:0022607;cellular component assembly;4.10046281871577e-18!GO:0015935;small ribosomal subunit;4.10046281871577e-18!GO:0015934;large ribosomal subunit;6.61043718408908e-18!GO:0005654;nucleoplasm;1.67886157719489e-17!GO:0008134;transcription factor binding;3.41317873921916e-17!GO:0031980;mitochondrial lumen;6.93109887351596e-17!GO:0005759;mitochondrial matrix;6.93109887351596e-17!GO:0005746;mitochondrial respiratory chain;1.37167366070419e-16!GO:0043228;non-membrane-bound organelle;1.48843204694918e-16!GO:0043232;intracellular non-membrane-bound organelle;1.48843204694918e-16!GO:0048770;pigment granule;4.9652259368123e-16!GO:0042470;melanosome;4.9652259368123e-16!GO:0051186;cofactor metabolic process;4.9652259368123e-16!GO:0044451;nucleoplasm part;6.31663726094818e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.43441870898505e-15!GO:0005681;spliceosome;5.14177513217206e-15!GO:0044432;endoplasmic reticulum part;1.36863553999949e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.79450932946547e-14!GO:0003954;NADH dehydrogenase activity;1.79450932946547e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.79450932946547e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.25708608065734e-14!GO:0003676;nucleic acid binding;3.42745037346087e-14!GO:0012505;endomembrane system;4.2439879877664e-14!GO:0006457;protein folding;7.67644451133186e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.1750830506427e-13!GO:0051649;establishment of cellular localization;1.92092400231488e-13!GO:0006259;DNA metabolic process;2.26825788763629e-13!GO:0051641;cellular localization;3.37219778144982e-13!GO:0016874;ligase activity;3.39719559541883e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.38705661161019e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.74097997076694e-13!GO:0042773;ATP synthesis coupled electron transport;4.74097997076694e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.07555935884404e-12!GO:0045271;respiratory chain complex I;1.07555935884404e-12!GO:0005747;mitochondrial respiratory chain complex I;1.07555935884404e-12!GO:0016070;RNA metabolic process;1.22331429142199e-12!GO:0005794;Golgi apparatus;2.20954242057066e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.653023908952e-12!GO:0006732;coenzyme metabolic process;4.90944925212514e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.9361246797597e-12!GO:0003712;transcription cofactor activity;1.05718550878513e-11!GO:0005761;mitochondrial ribosome;1.52033616568424e-11!GO:0000313;organellar ribosome;1.52033616568424e-11!GO:0006512;ubiquitin cycle;1.52033616568424e-11!GO:0006605;protein targeting;1.88879495551749e-10!GO:0044265;cellular macromolecule catabolic process;1.91233093897913e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.55790387958758e-10!GO:0005789;endoplasmic reticulum membrane;2.70433836714917e-10!GO:0005793;ER-Golgi intermediate compartment;2.72220620312775e-10!GO:0000166;nucleotide binding;6.19946383739835e-10!GO:0005730;nucleolus;6.49050870204655e-10!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.82463556042767e-10!GO:0016462;pyrophosphatase activity;6.82463556042767e-10!GO:0016817;hydrolase activity, acting on acid anhydrides;6.86656165110683e-10!GO:0043412;biopolymer modification;7.0998783358055e-10!GO:0044248;cellular catabolic process;9.55626553613817e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.34634964225339e-09!GO:0016192;vesicle-mediated transport;1.36795144268955e-09!GO:0022618;protein-RNA complex assembly;1.52815669102555e-09!GO:0043285;biopolymer catabolic process;1.74648532497388e-09!GO:0051082;unfolded protein binding;1.77038916013042e-09!GO:0017111;nucleoside-triphosphatase activity;1.87109253028374e-09!GO:0012501;programmed cell death;2.17625694326501e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;2.96439688463604e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;3.25985122627988e-09!GO:0009057;macromolecule catabolic process;3.29857215904177e-09!GO:0006915;apoptosis;4.00930180686372e-09!GO:0048193;Golgi vesicle transport;4.0440112277923e-09!GO:0044257;cellular protein catabolic process;4.40899856338611e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;4.5274692257545e-09!GO:0000375;RNA splicing, via transesterification reactions;4.5274692257545e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.5274692257545e-09!GO:0019941;modification-dependent protein catabolic process;4.55878095874362e-09!GO:0043632;modification-dependent macromolecule catabolic process;4.55878095874362e-09!GO:0009055;electron carrier activity;4.76249248016491e-09!GO:0051188;cofactor biosynthetic process;5.90192934682115e-09!GO:0006464;protein modification process;5.90192934682115e-09!GO:0006511;ubiquitin-dependent protein catabolic process;8.82064451728661e-09!GO:0048523;negative regulation of cellular process;1.29422974203597e-08!GO:0006323;DNA packaging;1.51866028345547e-08!GO:0006366;transcription from RNA polymerase II promoter;1.57320132897764e-08!GO:0008135;translation factor activity, nucleic acid binding;1.70881545922892e-08!GO:0009150;purine ribonucleotide metabolic process;2.10557024033859e-08!GO:0006163;purine nucleotide metabolic process;2.19818239991416e-08!GO:0030163;protein catabolic process;2.65164578465298e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.99727456978836e-08!GO:0008219;cell death;4.92189653464343e-08!GO:0016265;death;4.92189653464343e-08!GO:0050794;regulation of cellular process;5.96091396209151e-08!GO:0007049;cell cycle;6.79774260674986e-08!GO:0009259;ribonucleotide metabolic process;6.79774260674986e-08!GO:0005768;endosome;1.14665938612947e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.22964248968676e-07!GO:0006164;purine nucleotide biosynthetic process;1.30925185201364e-07!GO:0016604;nuclear body;1.40463082750377e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.89675255939203e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.95396091029432e-07!GO:0008639;small protein conjugating enzyme activity;2.80394980278705e-07!GO:0048519;negative regulation of biological process;3.19298892980799e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.17058470715076e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.76718562609107e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.76718562609107e-07!GO:0005773;vacuole;4.76718562609107e-07!GO:0043687;post-translational protein modification;4.76718562609107e-07!GO:0004842;ubiquitin-protein ligase activity;5.03389672980499e-07!GO:0009260;ribonucleotide biosynthetic process;5.36665768251521e-07!GO:0009060;aerobic respiration;5.37150769269787e-07!GO:0009141;nucleoside triphosphate metabolic process;6.15689930478586e-07!GO:0030532;small nuclear ribonucleoprotein complex;6.8158903876977e-07!GO:0051276;chromosome organization and biogenesis;7.70911437290317e-07!GO:0019787;small conjugating protein ligase activity;7.70911437290317e-07!GO:0016564;transcription repressor activity;9.01289328629488e-07!GO:0032553;ribonucleotide binding;9.0423639847325e-07!GO:0032555;purine ribonucleotide binding;9.0423639847325e-07!GO:0044440;endosomal part;9.09568224305606e-07!GO:0010008;endosome membrane;9.09568224305606e-07!GO:0015986;ATP synthesis coupled proton transport;9.28085978383903e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.28085978383903e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.56558954867552e-07!GO:0050789;regulation of biological process;9.56558954867552e-07!GO:0016491;oxidoreductase activity;1.0911127068947e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.46463232913776e-06!GO:0017076;purine nucleotide binding;1.73162237700881e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.74781239418514e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.74781239418514e-06!GO:0017038;protein import;1.85227431695348e-06!GO:0003713;transcription coactivator activity;1.90458198294915e-06!GO:0007005;mitochondrion organization and biogenesis;1.92326017613108e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.97487172217264e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.97487172217264e-06!GO:0006913;nucleocytoplasmic transport;2.07882789725126e-06!GO:0016563;transcription activator activity;2.07972302130772e-06!GO:0009108;coenzyme biosynthetic process;2.1396952160405e-06!GO:0003743;translation initiation factor activity;2.71847818723122e-06!GO:0045333;cellular respiration;2.74474192908735e-06!GO:0051726;regulation of cell cycle;3.09595476069098e-06!GO:0046034;ATP metabolic process;3.10886118552905e-06!GO:0008654;phospholipid biosynthetic process;3.27384247708033e-06!GO:0005788;endoplasmic reticulum lumen;3.95905221193433e-06!GO:0051169;nuclear transport;3.98003610864583e-06!GO:0006461;protein complex assembly;4.03750672369486e-06!GO:0000323;lytic vacuole;4.03750672369486e-06!GO:0005764;lysosome;4.03750672369486e-06!GO:0003924;GTPase activity;4.04378811322664e-06!GO:0016881;acid-amino acid ligase activity;4.23370732767912e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.38601751142329e-06!GO:0016568;chromatin modification;4.38601751142329e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.53963342723036e-06!GO:0003714;transcription corepressor activity;4.82177006663998e-06!GO:0000074;regulation of progression through cell cycle;5.14001899132351e-06!GO:0006446;regulation of translational initiation;5.28150414796545e-06!GO:0031324;negative regulation of cellular metabolic process;5.39819872648161e-06!GO:0022402;cell cycle process;5.82426617274349e-06!GO:0016607;nuclear speck;5.83618471321484e-06!GO:0045259;proton-transporting ATP synthase complex;5.92175823562955e-06!GO:0009117;nucleotide metabolic process;6.54893642168322e-06!GO:0045786;negative regulation of progression through cell cycle;6.65313120063519e-06!GO:0006399;tRNA metabolic process;6.88339561504917e-06!GO:0009056;catabolic process;8.57915885479195e-06!GO:0006333;chromatin assembly or disassembly;1.14231457354818e-05!GO:0030120;vesicle coat;1.15818384404808e-05!GO:0030662;coated vesicle membrane;1.15818384404808e-05!GO:0006754;ATP biosynthetic process;1.17942341709765e-05!GO:0006753;nucleoside phosphate metabolic process;1.17942341709765e-05!GO:0042254;ribosome biogenesis and assembly;1.17942341709765e-05!GO:0042981;regulation of apoptosis;1.23798442243255e-05!GO:0043067;regulation of programmed cell death;1.31340895105296e-05!GO:0006413;translational initiation;1.31340895105296e-05!GO:0008565;protein transporter activity;1.34274900376797e-05!GO:0065004;protein-DNA complex assembly;1.34274900376797e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.36962756724747e-05!GO:0005905;coated pit;1.79025781730459e-05!GO:0005667;transcription factor complex;1.83830841222451e-05!GO:0046474;glycerophospholipid biosynthetic process;1.93895295999823e-05!GO:0031988;membrane-bound vesicle;1.98488942675513e-05!GO:0019829;cation-transporting ATPase activity;2.01535243824091e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.11415452607445e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.11415452607445e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.11415452607445e-05!GO:0005770;late endosome;2.12398214189295e-05!GO:0005635;nuclear envelope;2.17535950352232e-05!GO:0048475;coated membrane;2.2068513854199e-05!GO:0030117;membrane coat;2.2068513854199e-05!GO:0008361;regulation of cell size;2.33029304920414e-05!GO:0016481;negative regulation of transcription;2.39967702080427e-05!GO:0006099;tricarboxylic acid cycle;2.50685103621657e-05!GO:0046356;acetyl-CoA catabolic process;2.50685103621657e-05!GO:0044431;Golgi apparatus part;2.64830095125747e-05!GO:0016049;cell growth;2.67724858174223e-05!GO:0008610;lipid biosynthetic process;2.84473392581887e-05!GO:0016853;isomerase activity;3.57631747457409e-05!GO:0016126;sterol biosynthetic process;3.76296759326068e-05!GO:0051187;cofactor catabolic process;3.76967996836782e-05!GO:0031965;nuclear membrane;4.04418765400357e-05!GO:0051427;hormone receptor binding;4.61038793164681e-05!GO:0016740;transferase activity;4.84411614768238e-05!GO:0043038;amino acid activation;5.05133996171101e-05!GO:0006418;tRNA aminoacylation for protein translation;5.05133996171101e-05!GO:0043039;tRNA aminoacylation;5.05133996171101e-05!GO:0009892;negative regulation of metabolic process;5.53376438347461e-05!GO:0006084;acetyl-CoA metabolic process;5.74360263622786e-05!GO:0006888;ER to Golgi vesicle-mediated transport;6.01278465428725e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.28838145729462e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.39784318603147e-05!GO:0005762;mitochondrial large ribosomal subunit;6.61678813272645e-05!GO:0000315;organellar large ribosomal subunit;6.61678813272645e-05!GO:0065002;intracellular protein transport across a membrane;6.93747811226573e-05!GO:0001558;regulation of cell growth;6.99587227708136e-05!GO:0031252;leading edge;7.2188593155488e-05!GO:0030036;actin cytoskeleton organization and biogenesis;7.37203753056681e-05!GO:0032559;adenyl ribonucleotide binding;7.56538125478769e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.63134994076829e-05!GO:0035257;nuclear hormone receptor binding;8.04293167333858e-05!GO:0005839;proteasome core complex (sensu Eukaryota);8.16309446311707e-05!GO:0009109;coenzyme catabolic process;9.29371051704097e-05!GO:0006916;anti-apoptosis;9.52795727553888e-05!GO:0005524;ATP binding;9.75724560402868e-05!GO:0044262;cellular carbohydrate metabolic process;0.000106403365215142!GO:0000785;chromatin;0.00011296668155744!GO:0043069;negative regulation of programmed cell death;0.000116249377452304!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000132008388709658!GO:0006752;group transfer coenzyme metabolic process;0.000149624400840464!GO:0043066;negative regulation of apoptosis;0.000151331760085491!GO:0007264;small GTPase mediated signal transduction;0.000160247289191768!GO:0030554;adenyl nucleotide binding;0.000160247289191768!GO:0031982;vesicle;0.000164707160725941!GO:0006974;response to DNA damage stimulus;0.000172911409179138!GO:0019843;rRNA binding;0.000175423881112016!GO:0031410;cytoplasmic vesicle;0.000175423881112016!GO:0006091;generation of precursor metabolites and energy;0.000183551724054468!GO:0031497;chromatin assembly;0.000189051977041926!GO:0051246;regulation of protein metabolic process;0.000189051977041926!GO:0033116;ER-Golgi intermediate compartment membrane;0.000194099896832191!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000248877585494279!GO:0006334;nucleosome assembly;0.000250656340629826!GO:0044453;nuclear membrane part;0.000279844048852384!GO:0045454;cell redox homeostasis;0.000302106176553671!GO:0000245;spliceosome assembly;0.000316385700351831!GO:0019899;enzyme binding;0.000316403715132757!GO:0045892;negative regulation of transcription, DNA-dependent;0.000316403715132757!GO:0015980;energy derivation by oxidation of organic compounds;0.000338535307173257!GO:0005791;rough endoplasmic reticulum;0.000345908299020379!GO:0030029;actin filament-based process;0.0003782102520903!GO:0006364;rRNA processing;0.0004049557998928!GO:0016859;cis-trans isomerase activity;0.0004049557998928!GO:0006695;cholesterol biosynthetic process;0.0004049557998928!GO:0000314;organellar small ribosomal subunit;0.000414095387193177!GO:0005763;mitochondrial small ribosomal subunit;0.000414095387193177!GO:0030176;integral to endoplasmic reticulum membrane;0.000445838836011038!GO:0005525;GTP binding;0.000453737071769287!GO:0032446;protein modification by small protein conjugation;0.000480847421485384!GO:0005774;vacuolar membrane;0.00048376980070389!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000543011606161871!GO:0006606;protein import into nucleus;0.00056385144881211!GO:0043566;structure-specific DNA binding;0.000577735278012782!GO:0040008;regulation of growth;0.00058680754644858!GO:0051170;nuclear import;0.000589765563957844!GO:0000278;mitotic cell cycle;0.000635564323659868!GO:0046489;phosphoinositide biosynthetic process;0.000638683102977111!GO:0004298;threonine endopeptidase activity;0.000665455705379003!GO:0003697;single-stranded DNA binding;0.000674404545444821!GO:0016567;protein ubiquitination;0.000687877379966221!GO:0046467;membrane lipid biosynthetic process;0.000694175733840204!GO:0016072;rRNA metabolic process;0.000739459926452369!GO:0030132;clathrin coat of coated pit;0.000745462675640308!GO:0006793;phosphorus metabolic process;0.000755604473985727!GO:0006796;phosphate metabolic process;0.000755604473985727!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000790893278540113!GO:0016779;nucleotidyltransferase activity;0.00080759897252005!GO:0042623;ATPase activity, coupled;0.000839299264144048!GO:0065007;biological regulation;0.000839299264144048!GO:0030867;rough endoplasmic reticulum membrane;0.000839299264144048!GO:0019867;outer membrane;0.000883394388687162!GO:0000139;Golgi membrane;0.00095674703042381!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000976630318584278!GO:0000151;ubiquitin ligase complex;0.000977425599334901!GO:0006650;glycerophospholipid metabolic process;0.00100773850727869!GO:0005798;Golgi-associated vesicle;0.00107167138930148!GO:0008250;oligosaccharyl transferase complex;0.00118092719466501!GO:0019222;regulation of metabolic process;0.00121098103020074!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0012296041980233!GO:0031968;organelle outer membrane;0.00123951769555264!GO:0030133;transport vesicle;0.00128707921521064!GO:0005765;lysosomal membrane;0.00132723191855821!GO:0006778;porphyrin metabolic process;0.00142648335298153!GO:0033013;tetrapyrrole metabolic process;0.00142648335298153!GO:0005769;early endosome;0.00144807293126274!GO:0006281;DNA repair;0.00151364177931537!GO:0009165;nucleotide biosynthetic process;0.00167936739180672!GO:0044437;vacuolar part;0.0016825759218626!GO:0031902;late endosome membrane;0.0016825759218626!GO:0016310;phosphorylation;0.00169983849819723!GO:0045941;positive regulation of transcription;0.00171301559255909!GO:0032561;guanyl ribonucleotide binding;0.00171301559255909!GO:0019001;guanyl nucleotide binding;0.00171301559255909!GO:0016044;membrane organization and biogenesis;0.00171301559255909!GO:0045893;positive regulation of transcription, DNA-dependent;0.00173055647575637!GO:0005694;chromosome;0.00174174871032469!GO:0005741;mitochondrial outer membrane;0.00192836851423613!GO:0009719;response to endogenous stimulus;0.0019653062686895!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00198606260626353!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00198744857215578!GO:0048522;positive regulation of cellular process;0.00201136565624005!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00201136565624005!GO:0004667;prostaglandin-D synthase activity;0.00201136565624005!GO:0050802;circadian sleep/wake cycle, sleep;0.00201136565624005!GO:0022410;circadian sleep/wake cycle process;0.00201136565624005!GO:0042749;regulation of circadian sleep/wake cycle;0.00201136565624005!GO:0016887;ATPase activity;0.00202134784788587!GO:0003899;DNA-directed RNA polymerase activity;0.00208316130719815!GO:0007040;lysosome organization and biogenesis;0.00213180588273934!GO:0051920;peroxiredoxin activity;0.00261442230512883!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00273230625022577!GO:0044427;chromosomal part;0.00276875768416639!GO:0006979;response to oxidative stress;0.00279730352777378!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00282661309472616!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00299650165666579!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00299650165666579!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00299650165666579!GO:0051789;response to protein stimulus;0.00314017501911872!GO:0006986;response to unfolded protein;0.00314017501911872!GO:0007006;mitochondrial membrane organization and biogenesis;0.00324317362694598!GO:0008286;insulin receptor signaling pathway;0.00333596259823423!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00344357074486229!GO:0015002;heme-copper terminal oxidase activity;0.00344357074486229!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00344357074486229!GO:0004129;cytochrome-c oxidase activity;0.00344357074486229!GO:0006779;porphyrin biosynthetic process;0.00350262195926333!GO:0033014;tetrapyrrole biosynthetic process;0.00350262195926333!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00352800910024372!GO:0005581;collagen;0.0035549065541424!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00362049867525009!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00362049867525009!GO:0006740;NADPH regeneration;0.00370638674638289!GO:0006098;pentose-phosphate shunt;0.00370638674638289!GO:0008026;ATP-dependent helicase activity;0.00371820942471178!GO:0043488;regulation of mRNA stability;0.00377588457236236!GO:0043487;regulation of RNA stability;0.00377588457236236!GO:0005643;nuclear pore;0.0037993009736373!GO:0018196;peptidyl-asparagine modification;0.00397257218019509!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00397257218019509!GO:0016125;sterol metabolic process;0.0039746842446497!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00408898650773317!GO:0004386;helicase activity;0.00420102758572016!GO:0016860;intramolecular oxidoreductase activity;0.00427982887760843!GO:0042168;heme metabolic process;0.00433865746499688!GO:0043021;ribonucleoprotein binding;0.00463427300839924!GO:0042158;lipoprotein biosynthetic process;0.00478859781095764!GO:0040029;regulation of gene expression, epigenetic;0.00481732124310768!GO:0043681;protein import into mitochondrion;0.00502501178483239!GO:0045792;negative regulation of cell size;0.0050334155002974!GO:0046930;pore complex;0.00525790714221799!GO:0005048;signal sequence binding;0.00535278058998717!GO:0043623;cellular protein complex assembly;0.00553013364754326!GO:0030308;negative regulation of cell growth;0.00564468800743772!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00564468800743772!GO:0016787;hydrolase activity;0.00569542309385515!GO:0051101;regulation of DNA binding;0.00579061904270217!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00582462344556515!GO:0008092;cytoskeletal protein binding;0.00582462344556515!GO:0006613;cotranslational protein targeting to membrane;0.00586713318313342!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00590627844055426!GO:0007033;vacuole organization and biogenesis;0.0059373860450404!GO:0007243;protein kinase cascade;0.00598656534344384!GO:0006506;GPI anchor biosynthetic process;0.00607931247851653!GO:0065009;regulation of a molecular function;0.00658387827706679!GO:0030041;actin filament polymerization;0.00717035728847214!GO:0006414;translational elongation;0.00717564678880665!GO:0030118;clathrin coat;0.00718397983849676!GO:0006643;membrane lipid metabolic process;0.0074537003529677!GO:0006260;DNA replication;0.00768286231558899!GO:0015630;microtubule cytoskeleton;0.00813850582103755!GO:0004576;oligosaccharyl transferase activity;0.00848467536010477!GO:0051329;interphase of mitotic cell cycle;0.0086208613146084!GO:0015992;proton transport;0.00869149646118953!GO:0004860;protein kinase inhibitor activity;0.00882194950396086!GO:0006644;phospholipid metabolic process;0.00888395976436193!GO:0006066;alcohol metabolic process;0.00900017816755272!GO:0006497;protein amino acid lipidation;0.00919792713889991!GO:0007265;Ras protein signal transduction;0.00919792713889991!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00919792713889991!GO:0006509;membrane protein ectodomain proteolysis;0.00920686135302927!GO:0033619;membrane protein proteolysis;0.00920686135302927!GO:0006818;hydrogen transport;0.0092832776473577!GO:0006626;protein targeting to mitochondrion;0.00931059920186588!GO:0006839;mitochondrial transport;0.00961149553047448!GO:0051287;NAD binding;0.0102396971748509!GO:0006505;GPI anchor metabolic process;0.0102396971748509!GO:0017166;vinculin binding;0.010434821912292!GO:0006783;heme biosynthetic process;0.0107862084653734!GO:0031272;regulation of pseudopodium formation;0.0109187173599607!GO:0031269;pseudopodium formation;0.0109187173599607!GO:0031344;regulation of cell projection organization and biogenesis;0.0109187173599607!GO:0031268;pseudopodium organization and biogenesis;0.0109187173599607!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0109187173599607!GO:0031274;positive regulation of pseudopodium formation;0.0109187173599607!GO:0006402;mRNA catabolic process;0.0116409137447199!GO:0043284;biopolymer biosynthetic process;0.0118182656151!GO:0007010;cytoskeleton organization and biogenesis;0.0122030106829829!GO:0051098;regulation of binding;0.0124447989296724!GO:0005885;Arp2/3 protein complex;0.0134822354339576!GO:0030880;RNA polymerase complex;0.0136351137216666!GO:0030384;phosphoinositide metabolic process;0.0136351137216666!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.013655492131159!GO:0015399;primary active transmembrane transporter activity;0.013655492131159!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0138237695255753!GO:0001726;ruffle;0.0138237695255753!GO:0050657;nucleic acid transport;0.0138237695255753!GO:0051236;establishment of RNA localization;0.0138237695255753!GO:0050658;RNA transport;0.0138237695255753!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0138451282312338!GO:0045926;negative regulation of growth;0.0139335513007807!GO:0006612;protein targeting to membrane;0.0143101260136276!GO:0045334;clathrin-coated endocytic vesicle;0.0146977261791882!GO:0005684;U2-dependent spliceosome;0.0148555486796587!GO:0006013;mannose metabolic process;0.014868562839658!GO:0022890;inorganic cation transmembrane transporter activity;0.0149015943445241!GO:0006739;NADP metabolic process;0.0149537459508855!GO:0051348;negative regulation of transferase activity;0.0150536714857824!GO:0008637;apoptotic mitochondrial changes;0.0150536714857824!GO:0006403;RNA localization;0.015128728457256!GO:0033673;negative regulation of kinase activity;0.0151641324011704!GO:0006469;negative regulation of protein kinase activity;0.0151641324011704!GO:0048471;perinuclear region of cytoplasm;0.0157647187828673!GO:0035258;steroid hormone receptor binding;0.0159657345719376!GO:0008154;actin polymerization and/or depolymerization;0.0161807717454895!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0173305807794881!GO:0006350;transcription;0.0174497411017627!GO:0019318;hexose metabolic process;0.0178902168566865!GO:0033559;unsaturated fatty acid metabolic process;0.0179212011680433!GO:0006636;unsaturated fatty acid biosynthetic process;0.0179212011680433!GO:0006595;polyamine metabolic process;0.0179498112126071!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0182706582368805!GO:0006289;nucleotide-excision repair;0.0190542444435302!GO:0046519;sphingoid metabolic process;0.0192574837612844!GO:0030027;lamellipodium;0.0196407242549017!GO:0042802;identical protein binding;0.0197135404695464!GO:0030663;COPI coated vesicle membrane;0.0198160697576473!GO:0030126;COPI vesicle coat;0.0198160697576473!GO:0030119;AP-type membrane coat adaptor complex;0.0198891589841089!GO:0007050;cell cycle arrest;0.0210866238419356!GO:0005996;monosaccharide metabolic process;0.0214982074584823!GO:0000786;nucleosome;0.0215766781092059!GO:0030128;clathrin coat of endocytic vesicle;0.0215971236572675!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0215971236572675!GO:0030122;AP-2 adaptor complex;0.0215971236572675!GO:0006749;glutathione metabolic process;0.0220047027293498!GO:0006790;sulfur metabolic process;0.0222271252395062!GO:0048518;positive regulation of biological process;0.0227505354242875!GO:0035035;histone acetyltransferase binding;0.0227643615470916!GO:0030137;COPI-coated vesicle;0.0227643615470916!GO:0005869;dynactin complex;0.0227668432838494!GO:0009966;regulation of signal transduction;0.0228464776013172!GO:0008047;enzyme activator activity;0.0235026554962014!GO:0031323;regulation of cellular metabolic process;0.0236253466542185!GO:0048468;cell development;0.0237730459726405!GO:0030658;transport vesicle membrane;0.0243161695280904!GO:0006082;organic acid metabolic process;0.0243208746814775!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.024495240855574!GO:0030125;clathrin vesicle coat;0.0246755211900908!GO:0030665;clathrin coated vesicle membrane;0.0246755211900908!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0247293770338542!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.025452538687348!GO:0048487;beta-tubulin binding;0.025636075029244!GO:0003724;RNA helicase activity;0.025664781971831!GO:0050662;coenzyme binding;0.0259935969476469!GO:0019752;carboxylic acid metabolic process;0.0261288685933564!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0268475696067443!GO:0000428;DNA-directed RNA polymerase complex;0.0268475696067443!GO:0006733;oxidoreduction coenzyme metabolic process;0.0270376632551807!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0270376632551807!GO:0031301;integral to organelle membrane;0.0271185436932772!GO:0030131;clathrin adaptor complex;0.0277400948326621!GO:0051325;interphase;0.0283092030345051!GO:0032981;mitochondrial respiratory chain complex I assembly;0.028557254104561!GO:0010257;NADH dehydrogenase complex assembly;0.028557254104561!GO:0033108;mitochondrial respiratory chain complex assembly;0.028557254104561!GO:0016272;prefoldin complex;0.0286570413618585!GO:0032507;maintenance of cellular protein localization;0.0291591855197853!GO:0000118;histone deacetylase complex;0.0299267706125776!GO:0006891;intra-Golgi vesicle-mediated transport;0.0301535876256819!GO:0006383;transcription from RNA polymerase III promoter;0.0301535876256819!GO:0005813;centrosome;0.0302897219304672!GO:0030659;cytoplasmic vesicle membrane;0.030472474436096!GO:0016197;endosome transport;0.031546091439393!GO:0008629;induction of apoptosis by intracellular signals;0.0317157194089126!GO:0043414;biopolymer methylation;0.0317837346333877!GO:0003746;translation elongation factor activity;0.0335451876602944!GO:0050749;apolipoprotein E receptor binding;0.0337730263000053!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0342381194038925!GO:0000030;mannosyltransferase activity;0.0343692169453455!GO:0006769;nicotinamide metabolic process;0.03441190754205!GO:0004177;aminopeptidase activity;0.0344428234798993!GO:0008033;tRNA processing;0.0346466686892617!GO:0006672;ceramide metabolic process;0.0352950424162427!GO:0000209;protein polyubiquitination;0.0366264093634626!GO:0031072;heat shock protein binding;0.0367629946356608!GO:0010468;regulation of gene expression;0.036769318597363!GO:0015631;tubulin binding;0.0367870020054124!GO:0030521;androgen receptor signaling pathway;0.0367870020054124!GO:0008203;cholesterol metabolic process;0.0377447616157713!GO:0044255;cellular lipid metabolic process;0.0377972663874067!GO:0051252;regulation of RNA metabolic process;0.0379461480389631!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0382967036737386!GO:0030134;ER to Golgi transport vesicle;0.0392499203716707!GO:0007021;tubulin folding;0.0392499203716707!GO:0019210;kinase inhibitor activity;0.0393276773834838!GO:0006007;glucose catabolic process;0.0400342766288233!GO:0045185;maintenance of protein localization;0.0401202908868368!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0402074058811816!GO:0008632;apoptotic program;0.0403586046827605!GO:0051539;4 iron, 4 sulfur cluster binding;0.0416515182002019!GO:0030031;cell projection biogenesis;0.0426616491357878!GO:0031901;early endosome membrane;0.0426660389710184!GO:0003729;mRNA binding;0.0426960190402032!GO:0046966;thyroid hormone receptor binding;0.0429852721924487!GO:0006767;water-soluble vitamin metabolic process;0.0430285262946204!GO:0000049;tRNA binding;0.0431064799039861!GO:0005096;GTPase activator activity;0.0447962911432997!GO:0042157;lipoprotein metabolic process;0.0449180000367726!GO:0044433;cytoplasmic vesicle part;0.0453855003778191!GO:0005975;carbohydrate metabolic process;0.0458060081434277!GO:0031543;peptidyl-proline dioxygenase activity;0.0466092263379311!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0467709219729856!GO:0005815;microtubule organizing center;0.0469976892887563!GO:0003923;GPI-anchor transamidase activity;0.0470263666643767!GO:0016255;attachment of GPI anchor to protein;0.0470263666643767!GO:0042765;GPI-anchor transamidase complex;0.0470263666643767!GO:0009967;positive regulation of signal transduction;0.0481129436235592!GO:0000096;sulfur amino acid metabolic process;0.0481350475203906!GO:0030503;regulation of cell redox homeostasis;0.0482937433360892!GO:0006914;autophagy;0.0487093898207957 | |||
|sample_id=11491 | |sample_id=11491 | ||
|sample_note= | |sample_note= | ||
Line 75: | Line 104: | ||
|sample_tissue=brain | |sample_tissue=brain | ||
|top_motifs=ZNF423:2.91828645731;EBF1:2.90190177844;GTF2A1,2:2.56398374841;ESR1:2.207699476;RXRA_VDR{dimer}:2.19513710948;ZIC1..3:1.96549922069;TAL1_TCF{3,4,12}:1.91558694578;ESRRA:1.86358450693;RXR{A,B,G}:1.83388711769;GZF1:1.705774058;TFAP4:1.70436747151;ZNF238:1.62499515314;TFCP2:1.58491370814;SP1:1.57242670777;TFAP2{A,C}:1.54827286875;RREB1:1.50138674443;PAX1,9:1.45453117524;HES1:1.39605002711;TLX1..3_NFIC{dimer}:1.37706946201;PATZ1:1.34414817119;bHLH_family:1.33710280448;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.27086941209;XCPE1{core}:1.25382718931;PAX5:1.22551218842;GLI1..3:1.21640125077;NR5A1,2:1.20690858493;ZNF148:1.17458380589;IKZF1:1.12367045058;RBPJ:1.11239314462;GTF2I:1.05820284008;HAND1,2:1.04833345506;FOXM1:1.00268073618;SRF:0.995391403227;ZBTB6:0.982388657036;MAZ:0.967182537452;RORA:0.917770509879;TFAP2B:0.822720172991;LHX3,4:0.766499126783;HNF4A_NR2F1,2:0.685025999342;HOX{A5,B5}:0.630166918834;FOXL1:0.609846642329;MED-1{core}:0.569718722956;HIC1:0.545622802704;ALX4:0.544789942768;GFI1B:0.53758454843;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.490941161968;TP53:0.458507906299;MZF1:0.449737185945;NR1H4:0.441605846247;NFE2L2:0.429544728812;TEAD1:0.428208896318;REST:0.422759567002;NR6A1:0.40893095099;LEF1_TCF7_TCF7L1,2:0.387355943891;KLF4:0.362662462771;GFI1:0.356917356575;EN1,2:0.33743926551;SOX5:0.292482765006;AR:0.264276015043;NANOG:0.223129509173;T:0.22010882552;ATF6:0.215847196054;EGR1..3:0.198344069665;XBP1:0.197316171949;STAT2,4,6:0.196452118787;HOX{A6,A7,B6,B7}:0.150650527618;MEF2{A,B,C,D}:0.140434962987;UFEwm:0.102741593688;HNF1A:0.0942407462137;TBP:0.0929608626862;NR3C1:0.0765500071993;SREBF1,2:0.0758662432448;HMX1:0.0722261567571;STAT5{A,B}:0.0637485530509;POU6F1:0.0549604076367;NKX2-3_NKX2-5:0.0274672991321;RFX1:0.0207810659653;MYBL2:0.0151175388431;NHLH1,2:0.0101503549941;ZNF143:0.00916325945905;CRX:-0.00340977433045;NFATC1..3:-0.0196164898414;SMAD1..7,9:-0.0361718482462;PBX1:-0.0409142591184;BACH2:-0.0488236253265;MTF1:-0.0594949370248;TBX4,5:-0.0665809478485;NFE2:-0.0759756690514;RUNX1..3:-0.0764999262419;YY1:-0.0910900921311;MYFfamily:-0.0912377066098;LMO2:-0.117606028527;SOX{8,9,10}:-0.126642130261;FOXQ1:-0.133781542373;NFIL3:-0.15038805893;EP300:-0.157518652979;GATA4:-0.165645366318;NFE2L1:-0.176706764886;MTE{core}:-0.178615386935;FOSL2:-0.189293224119;DBP:-0.19036141391;TOPORS:-0.220301891576;FOS_FOS{B,L1}_JUN{B,D}:-0.220740528886;NFY{A,B,C}:-0.224704617388;HLF:-0.26701166813;POU2F1..3:-0.272445486986;NFKB1_REL_RELA:-0.282071073271;ZNF384:-0.308435071193;SOX17:-0.35272975353;SNAI1..3:-0.357246035403;ETS1,2:-0.361324074332;PAX2:-0.36720811926;MYOD1:-0.374471417667;STAT1,3:-0.382548569004;NANOG{mouse}:-0.389775852481;JUN:-0.409040711646;PPARG:-0.411224725533;SPZ1:-0.417172946002;ZFP161:-0.42782058014;PRDM1:-0.433649298919;NRF1:-0.439527801408;PAX3,7:-0.4399286954;CUX2:-0.445877379193;BPTF:-0.448218916778;GCM1,2:-0.452195861097;PRRX1,2:-0.458347788481;AHR_ARNT_ARNT2:-0.465036376061;ONECUT1,2:-0.504822545954;VSX1,2:-0.508193464574;ADNP_IRX_SIX_ZHX:-0.521668008794;NKX6-1,2:-0.525098527057;FOXD3:-0.526037611894;CEBPA,B_DDIT3:-0.535159815391;SOX2:-0.54380754124;SPIB:-0.546500089956;MAFB:-0.556142962532;HIF1A:-0.55731128994;FOX{D1,D2}:-0.574719152383;TGIF1:-0.585301204777;AIRE:-0.61209727061;HMGA1,2:-0.613750875068;RFX2..5_RFXANK_RFXAP:-0.614541074826;GATA6:-0.651013295738;IRF1,2:-0.65461057432;FOXO1,3,4:-0.667647248434;IRF7:-0.679086861429;HSF1,2:-0.679830632407;ALX1:-0.694811629767;ZEB1:-0.69854308433;ARID5B:-0.726568954786;HOXA9_MEIS1:-0.731521188138;POU3F1..4:-0.742167464255;SPI1:-0.743229160843;EVI1:-0.752754938196;POU5F1:-0.792719543502;FOX{F1,F2,J1}:-0.808412002748;NKX3-2:-0.810330749563;ELK1,4_GABP{A,B1}:-0.838160271503;PDX1:-0.842755106785;TFDP1:-0.860389794026;ATF4:-0.88108246073;PAX8:-0.882460351966;HOX{A4,D4}:-0.934348662429;FOXP3:-0.939196159494;TEF:-0.95807691197;BREu{core}:-0.972929438185;PAX4:-0.980294940831;ATF2:-1.04638026613;OCT4_SOX2{dimer}:-1.06867881428;NKX2-2,8:-1.08643859105;ELF1,2,4:-1.12262567447;ATF5_CREB3:-1.12836331048;CREB1:-1.15851167507;NKX3-1:-1.20159190862;HBP1_HMGB_SSRP1_UBTF:-1.20397919505;FOXP1:-1.21254483042;CDC5L:-1.21684675101;CDX1,2,4:-1.22708654785;DMAP1_NCOR{1,2}_SMARC:-1.22738224626;PAX6:-1.24404365245;TLX2:-1.2996379659;FOXA2:-1.33470660966;MYB:-1.34608269895;E2F1..5:-1.36677229874;NKX2-1,4:-1.41465113441;NFIX:-1.47247248547;POU1F1:-1.62818136852;PITX1..3:-1.84963014469;FOX{I1,J2}:-2.07515912118;IKZF2:-2.29118732018;FOXN1:-2.3020028395;ZBTB16:-2.51930326011 | |top_motifs=ZNF423:2.91828645731;EBF1:2.90190177844;GTF2A1,2:2.56398374841;ESR1:2.207699476;RXRA_VDR{dimer}:2.19513710948;ZIC1..3:1.96549922069;TAL1_TCF{3,4,12}:1.91558694578;ESRRA:1.86358450693;RXR{A,B,G}:1.83388711769;GZF1:1.705774058;TFAP4:1.70436747151;ZNF238:1.62499515314;TFCP2:1.58491370814;SP1:1.57242670777;TFAP2{A,C}:1.54827286875;RREB1:1.50138674443;PAX1,9:1.45453117524;HES1:1.39605002711;TLX1..3_NFIC{dimer}:1.37706946201;PATZ1:1.34414817119;bHLH_family:1.33710280448;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.27086941209;XCPE1{core}:1.25382718931;PAX5:1.22551218842;GLI1..3:1.21640125077;NR5A1,2:1.20690858493;ZNF148:1.17458380589;IKZF1:1.12367045058;RBPJ:1.11239314462;GTF2I:1.05820284008;HAND1,2:1.04833345506;FOXM1:1.00268073618;SRF:0.995391403227;ZBTB6:0.982388657036;MAZ:0.967182537452;RORA:0.917770509879;TFAP2B:0.822720172991;LHX3,4:0.766499126783;HNF4A_NR2F1,2:0.685025999342;HOX{A5,B5}:0.630166918834;FOXL1:0.609846642329;MED-1{core}:0.569718722956;HIC1:0.545622802704;ALX4:0.544789942768;GFI1B:0.53758454843;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.490941161968;TP53:0.458507906299;MZF1:0.449737185945;NR1H4:0.441605846247;NFE2L2:0.429544728812;TEAD1:0.428208896318;REST:0.422759567002;NR6A1:0.40893095099;LEF1_TCF7_TCF7L1,2:0.387355943891;KLF4:0.362662462771;GFI1:0.356917356575;EN1,2:0.33743926551;SOX5:0.292482765006;AR:0.264276015043;NANOG:0.223129509173;T:0.22010882552;ATF6:0.215847196054;EGR1..3:0.198344069665;XBP1:0.197316171949;STAT2,4,6:0.196452118787;HOX{A6,A7,B6,B7}:0.150650527618;MEF2{A,B,C,D}:0.140434962987;UFEwm:0.102741593688;HNF1A:0.0942407462137;TBP:0.0929608626862;NR3C1:0.0765500071993;SREBF1,2:0.0758662432448;HMX1:0.0722261567571;STAT5{A,B}:0.0637485530509;POU6F1:0.0549604076367;NKX2-3_NKX2-5:0.0274672991321;RFX1:0.0207810659653;MYBL2:0.0151175388431;NHLH1,2:0.0101503549941;ZNF143:0.00916325945905;CRX:-0.00340977433045;NFATC1..3:-0.0196164898414;SMAD1..7,9:-0.0361718482462;PBX1:-0.0409142591184;BACH2:-0.0488236253265;MTF1:-0.0594949370248;TBX4,5:-0.0665809478485;NFE2:-0.0759756690514;RUNX1..3:-0.0764999262419;YY1:-0.0910900921311;MYFfamily:-0.0912377066098;LMO2:-0.117606028527;SOX{8,9,10}:-0.126642130261;FOXQ1:-0.133781542373;NFIL3:-0.15038805893;EP300:-0.157518652979;GATA4:-0.165645366318;NFE2L1:-0.176706764886;MTE{core}:-0.178615386935;FOSL2:-0.189293224119;DBP:-0.19036141391;TOPORS:-0.220301891576;FOS_FOS{B,L1}_JUN{B,D}:-0.220740528886;NFY{A,B,C}:-0.224704617388;HLF:-0.26701166813;POU2F1..3:-0.272445486986;NFKB1_REL_RELA:-0.282071073271;ZNF384:-0.308435071193;SOX17:-0.35272975353;SNAI1..3:-0.357246035403;ETS1,2:-0.361324074332;PAX2:-0.36720811926;MYOD1:-0.374471417667;STAT1,3:-0.382548569004;NANOG{mouse}:-0.389775852481;JUN:-0.409040711646;PPARG:-0.411224725533;SPZ1:-0.417172946002;ZFP161:-0.42782058014;PRDM1:-0.433649298919;NRF1:-0.439527801408;PAX3,7:-0.4399286954;CUX2:-0.445877379193;BPTF:-0.448218916778;GCM1,2:-0.452195861097;PRRX1,2:-0.458347788481;AHR_ARNT_ARNT2:-0.465036376061;ONECUT1,2:-0.504822545954;VSX1,2:-0.508193464574;ADNP_IRX_SIX_ZHX:-0.521668008794;NKX6-1,2:-0.525098527057;FOXD3:-0.526037611894;CEBPA,B_DDIT3:-0.535159815391;SOX2:-0.54380754124;SPIB:-0.546500089956;MAFB:-0.556142962532;HIF1A:-0.55731128994;FOX{D1,D2}:-0.574719152383;TGIF1:-0.585301204777;AIRE:-0.61209727061;HMGA1,2:-0.613750875068;RFX2..5_RFXANK_RFXAP:-0.614541074826;GATA6:-0.651013295738;IRF1,2:-0.65461057432;FOXO1,3,4:-0.667647248434;IRF7:-0.679086861429;HSF1,2:-0.679830632407;ALX1:-0.694811629767;ZEB1:-0.69854308433;ARID5B:-0.726568954786;HOXA9_MEIS1:-0.731521188138;POU3F1..4:-0.742167464255;SPI1:-0.743229160843;EVI1:-0.752754938196;POU5F1:-0.792719543502;FOX{F1,F2,J1}:-0.808412002748;NKX3-2:-0.810330749563;ELK1,4_GABP{A,B1}:-0.838160271503;PDX1:-0.842755106785;TFDP1:-0.860389794026;ATF4:-0.88108246073;PAX8:-0.882460351966;HOX{A4,D4}:-0.934348662429;FOXP3:-0.939196159494;TEF:-0.95807691197;BREu{core}:-0.972929438185;PAX4:-0.980294940831;ATF2:-1.04638026613;OCT4_SOX2{dimer}:-1.06867881428;NKX2-2,8:-1.08643859105;ELF1,2,4:-1.12262567447;ATF5_CREB3:-1.12836331048;CREB1:-1.15851167507;NKX3-1:-1.20159190862;HBP1_HMGB_SSRP1_UBTF:-1.20397919505;FOXP1:-1.21254483042;CDC5L:-1.21684675101;CDX1,2,4:-1.22708654785;DMAP1_NCOR{1,2}_SMARC:-1.22738224626;PAX6:-1.24404365245;TLX2:-1.2996379659;FOXA2:-1.33470660966;MYB:-1.34608269895;E2F1..5:-1.36677229874;NKX2-1,4:-1.41465113441;NFIX:-1.47247248547;POU1F1:-1.62818136852;PITX1..3:-1.84963014469;FOX{I1,J2}:-2.07515912118;IKZF2:-2.29118732018;FOXN1:-2.3020028395;ZBTB16:-2.51930326011 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11491-119E6;search_select_hide=table117:FF:11491-119E6 | |||
}} | }} |
Latest revision as of 18:04, 4 June 2020
Name: | Pericytes, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11317 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11317
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11317
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.41 |
10 | 10 | 0.16 |
100 | 100 | 0.985 |
101 | 101 | 0.445 |
102 | 102 | 0.674 |
103 | 103 | 0.913 |
104 | 104 | 0.342 |
105 | 105 | 0.0966 |
106 | 106 | 0.317 |
107 | 107 | 0.0904 |
108 | 108 | 0.805 |
109 | 109 | 0.12 |
11 | 11 | 0.206 |
110 | 110 | 0.236 |
111 | 111 | 0.575 |
112 | 112 | 0.715 |
113 | 113 | 0.0648 |
114 | 114 | 0.937 |
115 | 115 | 0.287 |
116 | 116 | 0.235 |
117 | 117 | 0.785 |
118 | 118 | 0.834 |
119 | 119 | 0.959 |
12 | 12 | 0.505 |
120 | 120 | 0.322 |
121 | 121 | 0.847 |
122 | 122 | 0.372 |
123 | 123 | 2.10785e-4 |
124 | 124 | 0.544 |
125 | 125 | 0.157 |
126 | 126 | 0.733 |
127 | 127 | 0.592 |
128 | 128 | 0.376 |
129 | 129 | 0.562 |
13 | 13 | 0.918 |
130 | 130 | 0.468 |
131 | 131 | 0.904 |
132 | 132 | 0.131 |
133 | 133 | 0.577 |
134 | 134 | 0.251 |
135 | 135 | 0.633 |
136 | 136 | 0.83 |
137 | 137 | 0.0342 |
138 | 138 | 0.435 |
139 | 139 | 0.855 |
14 | 14 | 0.789 |
140 | 140 | 0.206 |
141 | 141 | 0.165 |
142 | 142 | 0.83 |
143 | 143 | 0.324 |
144 | 144 | 0.843 |
145 | 145 | 0.472 |
146 | 146 | 0.332 |
147 | 147 | 0.38 |
148 | 148 | 0.559 |
149 | 149 | 0.0849 |
15 | 15 | 0.167 |
150 | 150 | 0.628 |
151 | 151 | 0.722 |
152 | 152 | 0.203 |
153 | 153 | 0.0639 |
154 | 154 | 0.0424 |
155 | 155 | 0.86 |
156 | 156 | 0.629 |
157 | 157 | 0.334 |
158 | 158 | 0.979 |
159 | 159 | 0.692 |
16 | 16 | 0.386 |
160 | 160 | 0.0753 |
161 | 161 | 0.728 |
162 | 162 | 0.173 |
163 | 163 | 0.621 |
164 | 164 | 0.327 |
165 | 165 | 0.125 |
166 | 166 | 0.66 |
167 | 167 | 0.188 |
168 | 168 | 0.998 |
169 | 169 | 0.0591 |
17 | 17 | 0.329 |
18 | 18 | 0.357 |
19 | 19 | 0.0843 |
2 | 2 | 0.167 |
20 | 20 | 0.732 |
21 | 21 | 0.802 |
22 | 22 | 0.0424 |
23 | 23 | 0.481 |
24 | 24 | 0.724 |
25 | 25 | 0.308 |
26 | 26 | 0.606 |
27 | 27 | 0.266 |
28 | 28 | 0.129 |
29 | 29 | 0.771 |
3 | 3 | 0.909 |
30 | 30 | 0.0311 |
31 | 31 | 0.401 |
32 | 32 | 2.70785e-8 |
33 | 33 | 0.969 |
34 | 34 | 0.0581 |
35 | 35 | 0.768 |
36 | 36 | 0.246 |
37 | 37 | 0.367 |
38 | 38 | 0.618 |
39 | 39 | 0.592 |
4 | 4 | 0.816 |
40 | 40 | 0.187 |
41 | 41 | 0.247 |
42 | 42 | 0.779 |
43 | 43 | 0.699 |
44 | 44 | 0.72 |
45 | 45 | 0.151 |
46 | 46 | 0.685 |
47 | 47 | 0.895 |
48 | 48 | 0.412 |
49 | 49 | 0.707 |
5 | 5 | 0.505 |
50 | 50 | 0.366 |
51 | 51 | 0.391 |
52 | 52 | 0.539 |
53 | 53 | 0.331 |
54 | 54 | 0.368 |
55 | 55 | 0.698 |
56 | 56 | 0.369 |
57 | 57 | 0.499 |
58 | 58 | 0.242 |
59 | 59 | 0.0156 |
6 | 6 | 0.387 |
60 | 60 | 0.451 |
61 | 61 | 0.906 |
62 | 62 | 0.295 |
63 | 63 | 0.746 |
64 | 64 | 0.328 |
65 | 65 | 0.061 |
66 | 66 | 0.872 |
67 | 67 | 0.754 |
68 | 68 | 0.187 |
69 | 69 | 0.134 |
7 | 7 | 0.971 |
70 | 70 | 0.664 |
71 | 71 | 0.898 |
72 | 72 | 0.57 |
73 | 73 | 0.121 |
74 | 74 | 0.152 |
75 | 75 | 0.818 |
76 | 76 | 0.293 |
77 | 77 | 0.0105 |
78 | 78 | 0.769 |
79 | 79 | 0.0163 |
8 | 8 | 0.395 |
80 | 80 | 0.538 |
81 | 81 | 0.412 |
82 | 82 | 0.221 |
83 | 83 | 0.487 |
84 | 84 | 0.312 |
85 | 85 | 0.159 |
86 | 86 | 0.93 |
87 | 87 | 0.924 |
88 | 88 | 0.268 |
89 | 89 | 0.265 |
9 | 9 | 0.0838 |
90 | 90 | 0.0187 |
91 | 91 | 0.335 |
92 | 92 | 0.998 |
93 | 93 | 0.709 |
94 | 94 | 0.936 |
95 | 95 | 0.518 |
96 | 96 | 0.616 |
97 | 97 | 0.388 |
98 | 98 | 0.462 |
99 | 99 | 0.0139 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11317
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000133 human pericyte sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000183 (contractile cell)
0000630 (supportive cell)
0000255 (eukaryotic cell)
0000669 (pericyte cell)
0002575 (central nervous system pericyte)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000133 (human pericyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA