FF:10549-107H9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005896 | ||
|accession_numbers=CAGE;DRX007892;DRR008764;DRZ000189;DRZ001574;DRZ011539;DRZ012924 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000945,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010039,UBERON:0010317,UBERON:0001555,UBERON:0005409,UBERON:0001041 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet=DOID:0050686,DOID: | |ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:3119 | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100787 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100787 | |fonse_cell_line=FF:0100787 | ||
|fonse_cell_line_closure=FF:0100787 | |fonse_cell_line_closure=FF:0100787 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/gastric%2520cancer%2520cell%2520line%253aAZ521.CNhs11286.10549-107H9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/gastric%2520cancer%2520cell%2520line%253aAZ521.CNhs11286.10549-107H9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/gastric%2520cancer%2520cell%2520line%253aAZ521.CNhs11286.10549-107H9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/gastric%2520cancer%2520cell%2520line%253aAZ521.CNhs11286.10549-107H9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/gastric%2520cancer%2520cell%2520line%253aAZ521.CNhs11286.10549-107H9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10549-107H9 | |id=FF:10549-107H9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0100787 | ||
|is_obsolete= | |||
|library_id=CNhs11286 | |||
|library_id_phase_based=2:CNhs11286 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10549 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10549 | |||
|name=gastric cancer cell line:AZ521 | |name=gastric cancer cell line:AZ521 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11286,LSID759,release008,COMPLETED | |profile_hcage=CNhs11286,LSID759,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=107 | |rna_box=107 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=87.55635 | |rna_weight_ug=87.55635 | ||
|sample_age=unknown | |sample_age=unknown | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB2087 | |sample_cell_catalog=RCB2087 | ||
|sample_cell_line=AZ521 | |sample_cell_line=AZ521 | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.45086848634819e-287!GO:0043226;organelle;4.34078670598825e-251!GO:0043227;membrane-bound organelle;4.36977356037018e-251!GO:0043231;intracellular membrane-bound organelle;9.08219825472952e-251!GO:0043229;intracellular organelle;2.88608446635787e-250!GO:0005737;cytoplasm;7.72396682241097e-173!GO:0044422;organelle part;4.04146218907207e-172!GO:0044446;intracellular organelle part;4.03175400734877e-170!GO:0044444;cytoplasmic part;1.45641868312496e-128!GO:0005634;nucleus;1.08095884268701e-124!GO:0032991;macromolecular complex;7.79383827575589e-118!GO:0044238;primary metabolic process;6.59186872034744e-114!GO:0044237;cellular metabolic process;7.90454788887367e-113!GO:0043170;macromolecule metabolic process;7.02978757646833e-108!GO:0030529;ribonucleoprotein complex;2.09843802030577e-100!GO:0044428;nuclear part;4.22843086017076e-97!GO:0003723;RNA binding;4.44360865751379e-94!GO:0043233;organelle lumen;6.22074045344574e-93!GO:0031974;membrane-enclosed lumen;6.22074045344574e-93!GO:0005739;mitochondrion;3.157722154746e-79!GO:0043283;biopolymer metabolic process;1.69511461855836e-70!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.14336411626783e-68!GO:0005515;protein binding;6.72260322649937e-65!GO:0010467;gene expression;2.63013949039606e-64!GO:0006396;RNA processing;1.17885747243731e-62!GO:0031981;nuclear lumen;1.0373174986737e-59!GO:0043234;protein complex;1.27491517800931e-59!GO:0016043;cellular component organization and biogenesis;1.01845126699884e-57!GO:0005840;ribosome;7.67185075763904e-57!GO:0006412;translation;2.29743297379669e-54!GO:0044429;mitochondrial part;2.83104172377916e-52!GO:0006259;DNA metabolic process;8.57246016248843e-51!GO:0031090;organelle membrane;3.45551567507018e-49!GO:0003676;nucleic acid binding;8.32060470084596e-49!GO:0003735;structural constituent of ribosome;1.86847365868444e-48!GO:0016071;mRNA metabolic process;6.39388775323499e-48!GO:0019538;protein metabolic process;3.69601026995993e-47!GO:0031967;organelle envelope;4.37181498156375e-47!GO:0031975;envelope;6.91576926917828e-47!GO:0033036;macromolecule localization;3.5735080487705e-46!GO:0015031;protein transport;6.74152371136418e-45!GO:0043228;non-membrane-bound organelle;1.46784415396973e-44!GO:0043232;intracellular non-membrane-bound organelle;1.46784415396973e-44!GO:0006996;organelle organization and biogenesis;1.06597601107275e-43!GO:0033279;ribosomal subunit;1.4089766642353e-43!GO:0006397;mRNA processing;2.46163200726991e-42!GO:0008380;RNA splicing;5.224169854864e-42!GO:0008104;protein localization;1.42963343097962e-41!GO:0044267;cellular protein metabolic process;7.20403007843855e-41!GO:0044249;cellular biosynthetic process;7.55218858855878e-41!GO:0044260;cellular macromolecule metabolic process;1.02893364825209e-40!GO:0045184;establishment of protein localization;7.15847633861774e-40!GO:0065003;macromolecular complex assembly;1.78946830849012e-39!GO:0046907;intracellular transport;2.68857112535224e-38!GO:0009058;biosynthetic process;2.88312011837653e-38!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.28893052653709e-38!GO:0005654;nucleoplasm;1.07402945176451e-36!GO:0005829;cytosol;1.33767692585e-36!GO:0007049;cell cycle;2.26421604025591e-36!GO:0009059;macromolecule biosynthetic process;7.19105622420577e-35!GO:0022607;cellular component assembly;8.45231720331276e-35!GO:0016070;RNA metabolic process;1.34481190712952e-34!GO:0005740;mitochondrial envelope;1.40317287140355e-33!GO:0019866;organelle inner membrane;2.94607677750872e-33!GO:0000166;nucleotide binding;4.95010109480139e-32!GO:0006886;intracellular protein transport;1.02290422600199e-31!GO:0031966;mitochondrial membrane;2.62781152674047e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.00617251646635e-31!GO:0044451;nucleoplasm part;1.82759074506952e-30!GO:0005743;mitochondrial inner membrane;2.13570852870833e-30!GO:0005681;spliceosome;2.69845355939936e-30!GO:0006974;response to DNA damage stimulus;7.02673011022656e-30!GO:0022402;cell cycle process;3.84294143805401e-28!GO:0005694;chromosome;3.51443051923882e-27!GO:0000278;mitotic cell cycle;4.70794152362085e-27!GO:0051649;establishment of cellular localization;2.70469404028064e-26!GO:0051641;cellular localization;5.58170404992864e-26!GO:0006281;DNA repair;7.98755004342568e-26!GO:0044445;cytosolic part;2.32647821315211e-25!GO:0051276;chromosome organization and biogenesis;3.79635393344634e-24!GO:0006119;oxidative phosphorylation;8.98403125760846e-24!GO:0015935;small ribosomal subunit;3.32678002444618e-23!GO:0005730;nucleolus;7.27575543522579e-23!GO:0006457;protein folding;7.84298919422277e-23!GO:0044427;chromosomal part;9.50766105586385e-23!GO:0017111;nucleoside-triphosphatase activity;1.07573436369641e-22!GO:0016462;pyrophosphatase activity;1.35444194244329e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.49557560339349e-22!GO:0031980;mitochondrial lumen;1.57732335279283e-22!GO:0005759;mitochondrial matrix;1.57732335279283e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.61218911940601e-22!GO:0051301;cell division;1.63091985247534e-22!GO:0006512;ubiquitin cycle;5.71054447620046e-22!GO:0022403;cell cycle phase;7.22985780120608e-22!GO:0044455;mitochondrial membrane part;1.29187713513445e-21!GO:0000087;M phase of mitotic cell cycle;1.6521554938287e-21!GO:0015934;large ribosomal subunit;1.70366895606764e-21!GO:0022618;protein-RNA complex assembly;1.8890276265344e-21!GO:0016874;ligase activity;3.82965926614405e-21!GO:0007067;mitosis;4.17545703973867e-21!GO:0032553;ribonucleotide binding;4.50200187540018e-21!GO:0032555;purine ribonucleotide binding;4.50200187540018e-21!GO:0006260;DNA replication;8.78265546151085e-21!GO:0017076;purine nucleotide binding;1.33904287129072e-20!GO:0008135;translation factor activity, nucleic acid binding;4.2627478834102e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;4.82666460863616e-19!GO:0005524;ATP binding;9.01410208799782e-19!GO:0000279;M phase;1.08318032810357e-18!GO:0032559;adenyl ribonucleotide binding;2.34556253069968e-18!GO:0006323;DNA packaging;2.4148439983865e-18!GO:0009719;response to endogenous stimulus;2.77571111613108e-18!GO:0005746;mitochondrial respiratory chain;4.58851084062336e-18!GO:0030554;adenyl nucleotide binding;1.12541476272863e-17!GO:0043285;biopolymer catabolic process;1.29778008946451e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.38542649206217e-17!GO:0019941;modification-dependent protein catabolic process;2.20061386698206e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.20061386698206e-17!GO:0042254;ribosome biogenesis and assembly;2.95448170022494e-17!GO:0044265;cellular macromolecule catabolic process;3.33688061952452e-17!GO:0006605;protein targeting;3.33833288739521e-17!GO:0016887;ATPase activity;4.28246060288305e-17!GO:0006511;ubiquitin-dependent protein catabolic process;4.4346486717534e-17!GO:0044257;cellular protein catabolic process;4.62610533359705e-17!GO:0031965;nuclear membrane;8.36073324007191e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.15078299214533e-16!GO:0042623;ATPase activity, coupled;1.4981489375488e-16!GO:0005761;mitochondrial ribosome;1.595230607281e-16!GO:0000313;organellar ribosome;1.595230607281e-16!GO:0044453;nuclear membrane part;3.35588262129548e-16!GO:0030163;protein catabolic process;5.07039854904371e-16!GO:0009057;macromolecule catabolic process;9.00595360262593e-16!GO:0012505;endomembrane system;1.65907519114884e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.79159664359383e-15!GO:0003954;NADH dehydrogenase activity;1.79159664359383e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.79159664359383e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.16518932626552e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;2.18747047600184e-15!GO:0000375;RNA splicing, via transesterification reactions;2.18747047600184e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.18747047600184e-15!GO:0051082;unfolded protein binding;2.42308606253572e-15!GO:0051186;cofactor metabolic process;2.51371768775458e-15!GO:0004386;helicase activity;3.73347572647573e-15!GO:0044248;cellular catabolic process;8.65569791697214e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.44748279117498e-14!GO:0008134;transcription factor binding;1.75974680491439e-14!GO:0006399;tRNA metabolic process;1.80563103570319e-14!GO:0000502;proteasome complex (sensu Eukaryota);2.41670691706095e-14!GO:0016604;nuclear body;3.17453004900695e-14!GO:0051726;regulation of cell cycle;3.17453004900695e-14!GO:0000074;regulation of progression through cell cycle;3.45756419802647e-14!GO:0003743;translation initiation factor activity;3.45756419802647e-14!GO:0048770;pigment granule;6.4095894916728e-14!GO:0042470;melanosome;6.4095894916728e-14!GO:0043412;biopolymer modification;6.78142671008793e-14!GO:0042775;organelle ATP synthesis coupled electron transport;7.2110352941365e-14!GO:0042773;ATP synthesis coupled electron transport;7.2110352941365e-14!GO:0006413;translational initiation;7.2110352941365e-14!GO:0005635;nuclear envelope;8.91723867639133e-14!GO:0005643;nuclear pore;1.25172463856513e-13!GO:0005783;endoplasmic reticulum;1.30683450270017e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.78542994786896e-13!GO:0045271;respiratory chain complex I;1.78542994786896e-13!GO:0005747;mitochondrial respiratory chain complex I;1.78542994786896e-13!GO:0015630;microtubule cytoskeleton;2.95680516400923e-13!GO:0008026;ATP-dependent helicase activity;3.15312660451555e-13!GO:0050657;nucleic acid transport;3.37718180882991e-13!GO:0051236;establishment of RNA localization;3.37718180882991e-13!GO:0050658;RNA transport;3.37718180882991e-13!GO:0006403;RNA localization;3.79810607842482e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.25010547908278e-13!GO:0065002;intracellular protein transport across a membrane;7.83505561081761e-13!GO:0048193;Golgi vesicle transport;8.96829942686254e-13!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.40601358064187e-12!GO:0016568;chromatin modification;1.56324044609344e-12!GO:0044432;endoplasmic reticulum part;3.21562021392893e-12!GO:0016607;nuclear speck;3.96132567143543e-12!GO:0000785;chromatin;4.12566916490106e-12!GO:0006732;coenzyme metabolic process;6.41909368707753e-12!GO:0006366;transcription from RNA polymerase II promoter;1.06521235566066e-11!GO:0006364;rRNA processing;1.28972910305601e-11!GO:0006913;nucleocytoplasmic transport;1.46764593968392e-11!GO:0006333;chromatin assembly or disassembly;1.49625478460218e-11!GO:0006446;regulation of translational initiation;1.67624826799663e-11!GO:0006464;protein modification process;2.18310846650534e-11!GO:0006163;purine nucleotide metabolic process;2.24175753351068e-11!GO:0006461;protein complex assembly;2.67820483488653e-11!GO:0065004;protein-DNA complex assembly;2.72458712450431e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.78103401082016e-11!GO:0046930;pore complex;2.87675703127459e-11!GO:0051169;nuclear transport;3.07683196952415e-11!GO:0016072;rRNA metabolic process;3.46275464389943e-11!GO:0009259;ribonucleotide metabolic process;4.02083742035613e-11!GO:0051028;mRNA transport;5.22366416368939e-11!GO:0043687;post-translational protein modification;5.91523473022298e-11!GO:0016192;vesicle-mediated transport;6.00253019182851e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.39808017087093e-11!GO:0008565;protein transporter activity;1.05732432875199e-10!GO:0006164;purine nucleotide biosynthetic process;2.16112354090451e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.5623681712893e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.76231108586048e-10!GO:0004812;aminoacyl-tRNA ligase activity;2.76231108586048e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.76231108586048e-10!GO:0009150;purine ribonucleotide metabolic process;3.26460759742768e-10!GO:0043038;amino acid activation;3.31051664455214e-10!GO:0006418;tRNA aminoacylation for protein translation;3.31051664455214e-10!GO:0043039;tRNA aminoacylation;3.31051664455214e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.51009544028653e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.85534093398703e-10!GO:0008639;small protein conjugating enzyme activity;7.43626896699063e-10!GO:0003712;transcription cofactor activity;8.10707268920151e-10!GO:0006261;DNA-dependent DNA replication;1.10189754285872e-09!GO:0017038;protein import;1.11167997333716e-09!GO:0009260;ribonucleotide biosynthetic process;1.24993873584941e-09!GO:0004842;ubiquitin-protein ligase activity;1.25882054696025e-09!GO:0019787;small conjugating protein ligase activity;1.68427336255104e-09!GO:0005667;transcription factor complex;2.11165726436444e-09!GO:0019222;regulation of metabolic process;2.54740603003422e-09!GO:0016779;nucleotidyltransferase activity;3.07252337880777e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.13337935542862e-09!GO:0015986;ATP synthesis coupled proton transport;3.32866657414498e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.32866657414498e-09!GO:0051188;cofactor biosynthetic process;4.02145496306353e-09!GO:0009055;electron carrier activity;4.10585429579315e-09!GO:0005794;Golgi apparatus;4.25662265773823e-09!GO:0000775;chromosome, pericentric region;5.61152568477142e-09!GO:0009056;catabolic process;5.8344441004629e-09!GO:0005813;centrosome;6.01789787193372e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.6123685773672e-09!GO:0016881;acid-amino acid ligase activity;7.1080569948731e-09!GO:0043566;structure-specific DNA binding;7.66578374290957e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.24579374666902e-09!GO:0009141;nucleoside triphosphate metabolic process;8.37319572582603e-09!GO:0005815;microtubule organizing center;9.28215067631553e-09!GO:0051329;interphase of mitotic cell cycle;1.17739657151997e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.46167934603427e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.46167934603427e-08!GO:0046034;ATP metabolic process;1.55183772455139e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.62793794658552e-08!GO:0009060;aerobic respiration;1.67010883225363e-08!GO:0019829;cation-transporting ATPase activity;1.75612064175481e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.09672579229444e-08!GO:0005789;endoplasmic reticulum membrane;2.18795042268685e-08!GO:0003697;single-stranded DNA binding;2.23475059887342e-08!GO:0005819;spindle;2.37938956611405e-08!GO:0050794;regulation of cellular process;2.50998440941037e-08!GO:0005768;endosome;2.67397093835668e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.84989572279801e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.84989572279801e-08!GO:0006754;ATP biosynthetic process;5.01098207202857e-08!GO:0006753;nucleoside phosphate metabolic process;5.01098207202857e-08!GO:0005793;ER-Golgi intermediate compartment;5.01482270034773e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.48153136106522e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.48153136106522e-08!GO:0045333;cellular respiration;1.00118488760107e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.01679053704309e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.17533342551593e-07!GO:0032446;protein modification by small protein conjugation;1.4566619776651e-07!GO:0006752;group transfer coenzyme metabolic process;1.48058132796877e-07!GO:0051325;interphase;1.50078356648838e-07!GO:0006350;transcription;1.50078356648838e-07!GO:0006334;nucleosome assembly;1.98893322693459e-07!GO:0031323;regulation of cellular metabolic process;2.0441919855262e-07!GO:0043623;cellular protein complex assembly;2.54413241501112e-07!GO:0009108;coenzyme biosynthetic process;2.71082047302395e-07!GO:0000075;cell cycle checkpoint;3.12654884622379e-07!GO:0031497;chromatin assembly;3.48057028893995e-07!GO:0000151;ubiquitin ligase complex;3.63448485590276e-07!GO:0008094;DNA-dependent ATPase activity;3.73769503118617e-07!GO:0016567;protein ubiquitination;3.79013914617183e-07!GO:0000245;spliceosome assembly;3.93716450722303e-07!GO:0007051;spindle organization and biogenesis;4.20591942540958e-07!GO:0009117;nucleotide metabolic process;5.84205533439692e-07!GO:0045259;proton-transporting ATP synthase complex;6.102241732409e-07!GO:0006099;tricarboxylic acid cycle;6.62479744602713e-07!GO:0046356;acetyl-CoA catabolic process;6.62479744602713e-07!GO:0044440;endosomal part;6.64619157586997e-07!GO:0010008;endosome membrane;6.64619157586997e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.99752439811317e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.99752439811317e-07!GO:0003899;DNA-directed RNA polymerase activity;7.4552857442601e-07!GO:0007005;mitochondrion organization and biogenesis;1.11891407535065e-06!GO:0016740;transferase activity;1.13935538018622e-06!GO:0016564;transcription repressor activity;1.20048834399168e-06!GO:0006084;acetyl-CoA metabolic process;1.21374526604745e-06!GO:0008654;phospholipid biosynthetic process;1.23997675704891e-06!GO:0051187;cofactor catabolic process;1.42104164458241e-06!GO:0003682;chromatin binding;1.50872692800616e-06!GO:0016787;hydrolase activity;1.74213939095895e-06!GO:0005657;replication fork;1.95578765814218e-06!GO:0045786;negative regulation of progression through cell cycle;2.03776497844307e-06!GO:0009109;coenzyme catabolic process;2.35249406185196e-06!GO:0005770;late endosome;2.41383317302614e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.84135289752566e-06!GO:0012501;programmed cell death;2.95292593990312e-06!GO:0016363;nuclear matrix;3.02022905810814e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.3753782565446e-06!GO:0005762;mitochondrial large ribosomal subunit;3.55397141871315e-06!GO:0000315;organellar large ribosomal subunit;3.55397141871315e-06!GO:0006915;apoptosis;3.81304252513672e-06!GO:0003724;RNA helicase activity;4.0167783333346e-06!GO:0010468;regulation of gene expression;4.02740833226166e-06!GO:0006613;cotranslational protein targeting to membrane;4.28516662529768e-06!GO:0006302;double-strand break repair;4.28516662529768e-06!GO:0016563;transcription activator activity;4.96470829793814e-06!GO:0006606;protein import into nucleus;5.09734794341315e-06!GO:0006793;phosphorus metabolic process;5.26664693449164e-06!GO:0006796;phosphate metabolic process;5.26664693449164e-06!GO:0006310;DNA recombination;5.49082623738018e-06!GO:0031324;negative regulation of cellular metabolic process;6.3008963740394e-06!GO:0051170;nuclear import;6.58139982047875e-06!GO:0048475;coated membrane;6.87971242707029e-06!GO:0030117;membrane coat;6.87971242707029e-06!GO:0005874;microtubule;7.23066674171491e-06!GO:0005788;endoplasmic reticulum lumen;7.24466103550053e-06!GO:0030120;vesicle coat;7.24466103550053e-06!GO:0030662;coated vesicle membrane;7.24466103550053e-06!GO:0007017;microtubule-based process;7.37286867766371e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.74684164731197e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.24868104775314e-06!GO:0008033;tRNA processing;9.24868104775314e-06!GO:0008219;cell death;1.13409015260549e-05!GO:0016265;death;1.13409015260549e-05!GO:0032774;RNA biosynthetic process;1.30177050422274e-05!GO:0051427;hormone receptor binding;1.31726436289127e-05!GO:0016853;isomerase activity;1.42444110766662e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.69466028781155e-05!GO:0016859;cis-trans isomerase activity;1.71992521905373e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.73835844117606e-05!GO:0006351;transcription, DNA-dependent;1.75160978034233e-05!GO:0003684;damaged DNA binding;1.78552165776343e-05!GO:0000314;organellar small ribosomal subunit;1.95375117029306e-05!GO:0005763;mitochondrial small ribosomal subunit;1.95375117029306e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.98933464704338e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;2.29942412879617e-05!GO:0016310;phosphorylation;2.32725755224301e-05!GO:0006414;translational elongation;2.34333197861244e-05!GO:0003677;DNA binding;2.49368842486314e-05!GO:0043021;ribonucleoprotein binding;2.52982293395782e-05!GO:0009892;negative regulation of metabolic process;2.61170605084162e-05!GO:0008168;methyltransferase activity;2.79505832166434e-05!GO:0050789;regulation of biological process;3.03137010294695e-05!GO:0035257;nuclear hormone receptor binding;3.03137010294695e-05!GO:0051246;regulation of protein metabolic process;3.3329181847262e-05!GO:0051168;nuclear export;3.5362110083565e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.92942493320371e-05!GO:0048471;perinuclear region of cytoplasm;3.98578302446113e-05!GO:0003690;double-stranded DNA binding;4.32972784441195e-05!GO:0019843;rRNA binding;4.50171745291716e-05!GO:0005798;Golgi-associated vesicle;4.57325466122457e-05!GO:0000776;kinetochore;5.28091581243188e-05!GO:0005525;GTP binding;5.55779287339214e-05!GO:0051052;regulation of DNA metabolic process;5.59140590341674e-05!GO:0044452;nucleolar part;5.64993592154243e-05!GO:0006626;protein targeting to mitochondrion;6.43699772120701e-05!GO:0003713;transcription coactivator activity;6.4745125239655e-05!GO:0016481;negative regulation of transcription;7.01211447669062e-05!GO:0007059;chromosome segregation;7.78402434598797e-05!GO:0006383;transcription from RNA polymerase III promoter;7.9311833348741e-05!GO:0003678;DNA helicase activity;8.32302533979537e-05!GO:0043681;protein import into mitochondrion;8.78997854753987e-05!GO:0005773;vacuole;8.88432969993305e-05!GO:0048523;negative regulation of cellular process;9.38186634619649e-05!GO:0003714;transcription corepressor activity;9.38724233725926e-05!GO:0005839;proteasome core complex (sensu Eukaryota);9.48811840675933e-05!GO:0007088;regulation of mitosis;0.000116655821906404!GO:0000059;protein import into nucleus, docking;0.000118625401226276!GO:0031988;membrane-bound vesicle;0.000123576411928816!GO:0005769;early endosome;0.000125003479188166!GO:0046489;phosphoinositide biosynthetic process;0.000125902102263267!GO:0003924;GTPase activity;0.000132370276691375!GO:0006352;transcription initiation;0.000138502118771715!GO:0046474;glycerophospholipid biosynthetic process;0.000140139908429991!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000143855872138912!GO:0003729;mRNA binding;0.00014852279800236!GO:0008186;RNA-dependent ATPase activity;0.000157431713358114!GO:0000786;nucleosome;0.000158869778925822!GO:0016251;general RNA polymerase II transcription factor activity;0.000160895609293496!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00016496988932912!GO:0045449;regulation of transcription;0.000172678921293704!GO:0031072;heat shock protein binding;0.00019191193721194!GO:0006612;protein targeting to membrane;0.000210448655542478!GO:0031982;vesicle;0.000219369345850988!GO:0009165;nucleotide biosynthetic process;0.000238243665086156!GO:0016023;cytoplasmic membrane-bound vesicle;0.000250174944220034!GO:0032508;DNA duplex unwinding;0.000250174944220034!GO:0032392;DNA geometric change;0.000250174944220034!GO:0006402;mRNA catabolic process;0.00025188293607679!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00025289462217104!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000280371850747121!GO:0016491;oxidoreductase activity;0.000289695280990276!GO:0007052;mitotic spindle organization and biogenesis;0.000302837758607583!GO:0000323;lytic vacuole;0.000305512926492462!GO:0005764;lysosome;0.000305512926492462!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000343867063897574!GO:0004298;threonine endopeptidase activity;0.000352210176724774!GO:0044431;Golgi apparatus part;0.000352376340366298!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000354986169551403!GO:0015399;primary active transmembrane transporter activity;0.000354986169551403!GO:0006839;mitochondrial transport;0.000356666073366354!GO:0045454;cell redox homeostasis;0.00036196569529223!GO:0015980;energy derivation by oxidation of organic compounds;0.000408305326380359!GO:0000049;tRNA binding;0.000413386697858213!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000469966222715934!GO:0004004;ATP-dependent RNA helicase activity;0.000481596351229576!GO:0031252;leading edge;0.000493464716285936!GO:0000228;nuclear chromosome;0.000498219995481987!GO:0006338;chromatin remodeling;0.000505959336853436!GO:0030867;rough endoplasmic reticulum membrane;0.000512853998140137!GO:0005637;nuclear inner membrane;0.000522217008022477!GO:0015631;tubulin binding;0.000528332992588018!GO:0005048;signal sequence binding;0.000530330244985829!GO:0006289;nucleotide-excision repair;0.000535051087277529!GO:0032561;guanyl ribonucleotide binding;0.000536804447525539!GO:0019001;guanyl nucleotide binding;0.000536804447525539!GO:0003711;transcription elongation regulator activity;0.000541303528434533!GO:0006916;anti-apoptosis;0.000543828157714202!GO:0031410;cytoplasmic vesicle;0.000566440028574794!GO:0007093;mitotic cell cycle checkpoint;0.000602603073982709!GO:0006268;DNA unwinding during replication;0.000617844316572684!GO:0007010;cytoskeleton organization and biogenesis;0.000639011320529253!GO:0000082;G1/S transition of mitotic cell cycle;0.000655793887775932!GO:0042981;regulation of apoptosis;0.000676623449012128!GO:0006091;generation of precursor metabolites and energy;0.000687059274872547!GO:0043067;regulation of programmed cell death;0.000709052615098386!GO:0048519;negative regulation of biological process;0.000729653663704384!GO:0005684;U2-dependent spliceosome;0.000804046551016213!GO:0051920;peroxiredoxin activity;0.000805909049262863!GO:0006818;hydrogen transport;0.000812559257779099!GO:0048500;signal recognition particle;0.00087380538393411!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000881453476716332!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000881453476716332!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000881453476716332!GO:0046467;membrane lipid biosynthetic process;0.000888533365048865!GO:0019899;enzyme binding;0.000904557963642661!GO:0006401;RNA catabolic process;0.0010107433637375!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00101627143587924!GO:0051789;response to protein stimulus;0.00102707010066585!GO:0006986;response to unfolded protein;0.00102707010066585!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00106535559738708!GO:0015992;proton transport;0.00109859965467796!GO:0006405;RNA export from nucleus;0.00112389731594717!GO:0006891;intra-Golgi vesicle-mediated transport;0.00119496695416443!GO:0006497;protein amino acid lipidation;0.00119602015129228!GO:0005885;Arp2/3 protein complex;0.00122932364571806!GO:0046483;heterocycle metabolic process;0.0012421765685654!GO:0006695;cholesterol biosynthetic process;0.00126240068424967!GO:0051087;chaperone binding;0.00127673675965184!GO:0042158;lipoprotein biosynthetic process;0.0013124930058506!GO:0043433;negative regulation of transcription factor activity;0.0013142660243704!GO:0051539;4 iron, 4 sulfur cluster binding;0.00132396776837381!GO:0009112;nucleobase metabolic process;0.00133342550520481!GO:0006284;base-excision repair;0.00138004375107267!GO:0033673;negative regulation of kinase activity;0.00138004375107267!GO:0006469;negative regulation of protein kinase activity;0.00138004375107267!GO:0032200;telomere organization and biogenesis;0.00146942120457713!GO:0000723;telomere maintenance;0.00146942120457713!GO:0016126;sterol biosynthetic process;0.00148420910260316!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00150115848053132!GO:0031124;mRNA 3'-end processing;0.0015019840729707!GO:0008312;7S RNA binding;0.0015101190415547!GO:0003702;RNA polymerase II transcription factor activity;0.00156046063543304!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00160944639495545!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00160944639495545!GO:0006355;regulation of transcription, DNA-dependent;0.00161613567593894!GO:0030880;RNA polymerase complex;0.00163704006976415!GO:0007050;cell cycle arrest;0.00174833201974603!GO:0008022;protein C-terminus binding;0.00181466572230532!GO:0043624;cellular protein complex disassembly;0.00181466572230532!GO:0003746;translation elongation factor activity;0.00190006533636536!GO:0000922;spindle pole;0.00191966784219719!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00191966784219719!GO:0015002;heme-copper terminal oxidase activity;0.00191966784219719!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00191966784219719!GO:0004129;cytochrome-c oxidase activity;0.00191966784219719!GO:0004518;nuclease activity;0.00203018307947312!GO:0022890;inorganic cation transmembrane transporter activity;0.00218179116310319!GO:0051348;negative regulation of transferase activity;0.0021950064129724!GO:0043069;negative regulation of programmed cell death;0.00225064368832918!GO:0045045;secretory pathway;0.00231757947435021!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00233125531686691!GO:0032984;macromolecular complex disassembly;0.00239477571221908!GO:0006144;purine base metabolic process;0.00239900418458267!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00249424799059346!GO:0045047;protein targeting to ER;0.00249424799059346!GO:0030521;androgen receptor signaling pathway;0.00252761160933924!GO:0051540;metal cluster binding;0.00253679857321148!GO:0051536;iron-sulfur cluster binding;0.00253679857321148!GO:0006506;GPI anchor biosynthetic process;0.00256851951541455!GO:0006730;one-carbon compound metabolic process;0.00257450340700707!GO:0043066;negative regulation of apoptosis;0.00264436196484424!GO:0007006;mitochondrial membrane organization and biogenesis;0.00265276731386101!GO:0016272;prefoldin complex;0.00269907877765781!GO:0033116;ER-Golgi intermediate compartment membrane;0.00272436268601838!GO:0005758;mitochondrial intermembrane space;0.00285163220856078!GO:0009451;RNA modification;0.00287962031802738!GO:0030384;phosphoinositide metabolic process;0.00296205558993004!GO:0006505;GPI anchor metabolic process;0.00312067126561995!GO:0006650;glycerophospholipid metabolic process;0.00312845065594026!GO:0006378;mRNA polyadenylation;0.00318668958014841!GO:0006611;protein export from nucleus;0.00332972827464893!GO:0043492;ATPase activity, coupled to movement of substances;0.00346682354094311!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00352755692953835!GO:0008180;signalosome;0.00352755692953835!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0035679850652816!GO:0000428;DNA-directed RNA polymerase complex;0.0035679850652816!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00366820997583194!GO:0019867;outer membrane;0.00368564585204283!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00368564585204283!GO:0031968;organelle outer membrane;0.00374070696095559!GO:0046982;protein heterodimerization activity;0.00377531875266716!GO:0005774;vacuolar membrane;0.0037982128720317!GO:0000339;RNA cap binding;0.00385380048971429!GO:0000086;G2/M transition of mitotic cell cycle;0.00395589495231465!GO:0043241;protein complex disassembly;0.00399936931645671!GO:0009303;rRNA transcription;0.00406142336436386!GO:0006275;regulation of DNA replication;0.00407229412416449!GO:0031902;late endosome membrane;0.00419684432207287!GO:0051252;regulation of RNA metabolic process;0.00421334210163497!GO:0005876;spindle microtubule;0.00428769719214225!GO:0004527;exonuclease activity;0.00436135309761285!GO:0030027;lamellipodium;0.00437167189329888!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00443247773198503!GO:0043284;biopolymer biosynthetic process;0.00454824602672739!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00462386518683768!GO:0031123;RNA 3'-end processing;0.00473714258553447!GO:0008017;microtubule binding;0.00479816438262534!GO:0042393;histone binding;0.00533368675326865!GO:0000781;chromosome, telomeric region;0.0053992707262285!GO:0048487;beta-tubulin binding;0.00566678344102955!GO:0031970;organelle envelope lumen;0.00599489084249143!GO:0043596;nuclear replication fork;0.00601696825327788!GO:0016407;acetyltransferase activity;0.00607624996790886!GO:0000725;recombinational repair;0.00609474056167111!GO:0000724;double-strand break repair via homologous recombination;0.00609474056167111!GO:0005669;transcription factor TFIID complex;0.00638067835822869!GO:0030176;integral to endoplasmic reticulum membrane;0.00643123202259448!GO:0009116;nucleoside metabolic process;0.00654276108163011!GO:0065009;regulation of a molecular function;0.00672026787790269!GO:0005905;coated pit;0.00672653132862877!GO:0030663;COPI coated vesicle membrane;0.00673727878699628!GO:0030126;COPI vesicle coat;0.00673727878699628!GO:0004003;ATP-dependent DNA helicase activity;0.00677148988045666!GO:0005853;eukaryotic translation elongation factor 1 complex;0.00685985889857405!GO:0000910;cytokinesis;0.00710757578667039!GO:0004674;protein serine/threonine kinase activity;0.00756881916021713!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00763612319776478!GO:0000152;nuclear ubiquitin ligase complex;0.00768017155330059!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00784518741915186!GO:0042770;DNA damage response, signal transduction;0.00793617464956762!GO:0030658;transport vesicle membrane;0.00814751663044901!GO:0005741;mitochondrial outer membrane;0.00860104915038257!GO:0032259;methylation;0.00863566819206024!GO:0008276;protein methyltransferase activity;0.0086717122814649!GO:0006520;amino acid metabolic process;0.0087405654125973!GO:0000819;sister chromatid segregation;0.00877898147044812!GO:0006270;DNA replication initiation;0.00879485744488349!GO:0005832;chaperonin-containing T-complex;0.0088943662720177!GO:0007040;lysosome organization and biogenesis;0.00904914274999757!GO:0043022;ribosome binding;0.00912459704780036!GO:0044437;vacuolar part;0.0091659075058009!GO:0000096;sulfur amino acid metabolic process;0.00953347528244739!GO:0030118;clathrin coat;0.00971300976167475!GO:0035258;steroid hormone receptor binding;0.00976708624832833!GO:0007033;vacuole organization and biogenesis;0.00982237807850439!GO:0006400;tRNA modification;0.00991264312979585!GO:0045892;negative regulation of transcription, DNA-dependent;0.00991367835145133!GO:0050662;coenzyme binding;0.00998689188756463!GO:0016202;regulation of striated muscle development;0.0100262388596309!GO:0000070;mitotic sister chromatid segregation;0.0100460036428731!GO:0000139;Golgi membrane;0.0101139908840675!GO:0007004;telomere maintenance via telomerase;0.0104495853772574!GO:0000118;histone deacetylase complex;0.0105033787619464!GO:0008139;nuclear localization sequence binding;0.0105033787619464!GO:0005869;dynactin complex;0.0105160767353005!GO:0046112;nucleobase biosynthetic process;0.0107750597325951!GO:0043488;regulation of mRNA stability;0.0108784959958252!GO:0043487;regulation of RNA stability;0.0108784959958252!GO:0031570;DNA integrity checkpoint;0.0110510813992003!GO:0044450;microtubule organizing center part;0.0110739340359722!GO:0030137;COPI-coated vesicle;0.011100061405936!GO:0043130;ubiquitin binding;0.0111409260129029!GO:0032182;small conjugating protein binding;0.0111409260129029!GO:0008097;5S rRNA binding;0.0112149492999509!GO:0006672;ceramide metabolic process;0.0113306478589376!GO:0042802;identical protein binding;0.0114849041957748!GO:0005791;rough endoplasmic reticulum;0.0117369822161334!GO:0019783;small conjugating protein-specific protease activity;0.012028099635861!GO:0006367;transcription initiation from RNA polymerase II promoter;0.012028099635861!GO:0048037;cofactor binding;0.0121120602495123!GO:0006376;mRNA splice site selection;0.0123017895056037!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0123017895056037!GO:0005765;lysosomal membrane;0.012400094698532!GO:0006778;porphyrin metabolic process;0.0124375395958209!GO:0033013;tetrapyrrole metabolic process;0.0124375395958209!GO:0003756;protein disulfide isomerase activity;0.0125425745091811!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0125425745091811!GO:0030518;steroid hormone receptor signaling pathway;0.0130735498701733!GO:0016790;thiolester hydrolase activity;0.0136143714664769!GO:0006595;polyamine metabolic process;0.0136385046325053!GO:0045941;positive regulation of transcription;0.0138553957002376!GO:0046966;thyroid hormone receptor binding;0.0138553957002376!GO:0004576;oligosaccharyl transferase activity;0.0138983081166762!GO:0000178;exosome (RNase complex);0.013929246781243!GO:0005875;microtubule associated complex;0.0139460268360486!GO:0004843;ubiquitin-specific protease activity;0.0146606431750566!GO:0016585;chromatin remodeling complex;0.0147506499654961!GO:0046519;sphingoid metabolic process;0.014824731305299!GO:0030134;ER to Golgi transport vesicle;0.0148693873335642!GO:0030660;Golgi-associated vesicle membrane;0.0150354788461997!GO:0000792;heterochromatin;0.0153001684409958!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0153742651767356!GO:0043414;biopolymer methylation;0.0154042776399532!GO:0043601;nuclear replisome;0.0155047923817168!GO:0030894;replisome;0.0155047923817168!GO:0000209;protein polyubiquitination;0.0155047923817168!GO:0043189;H4/H2A histone acetyltransferase complex;0.0163036254649706!GO:0019752;carboxylic acid metabolic process;0.0163352672233903!GO:0035267;NuA4 histone acetyltransferase complex;0.0163352672233903!GO:0006740;NADPH regeneration;0.0165706608978816!GO:0006098;pentose-phosphate shunt;0.0165706608978816!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0170215291275492!GO:0008250;oligosaccharyl transferase complex;0.0173107113542475!GO:0006082;organic acid metabolic process;0.0174142027878217!GO:0044454;nuclear chromosome part;0.0174623508683194!GO:0016044;membrane organization and biogenesis;0.0174746904359804!GO:0006278;RNA-dependent DNA replication;0.0177362598766095!GO:0051098;regulation of binding;0.0178116042122863!GO:0045893;positive regulation of transcription, DNA-dependent;0.0183863795738022!GO:0043631;RNA polyadenylation;0.0184883265089694!GO:0030132;clathrin coat of coated pit;0.019006787521968!GO:0009066;aspartate family amino acid metabolic process;0.0190786781665435!GO:0006643;membrane lipid metabolic process;0.0192441950928975!GO:0043407;negative regulation of MAP kinase activity;0.0195991715030044!GO:0005680;anaphase-promoting complex;0.0197074317393679!GO:0031577;spindle checkpoint;0.0198091518112987!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0201938210631069!GO:0030133;transport vesicle;0.0210207297902133!GO:0004221;ubiquitin thiolesterase activity;0.0211067442932776!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0214825633530953!GO:0008361;regulation of cell size;0.0217688522941828!GO:0008610;lipid biosynthetic process;0.0219974543123516!GO:0006607;NLS-bearing substrate import into nucleus;0.0220029615239266!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.022003481908558!GO:0000726;non-recombinational repair;0.0221154770522465!GO:0051287;NAD binding;0.0221154770522465!GO:0006220;pyrimidine nucleotide metabolic process;0.0221217387579952!GO:0007021;tubulin folding;0.0221738571096155!GO:0030127;COPII vesicle coat;0.0221744216346812!GO:0012507;ER to Golgi transport vesicle membrane;0.0221744216346812!GO:0005663;DNA replication factor C complex;0.0224145792496106!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0230627406452439!GO:0000123;histone acetyltransferase complex;0.0233925163199012!GO:0008536;Ran GTPase binding;0.0238240403955088!GO:0004532;exoribonuclease activity;0.0244628874912249!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0244628874912249!GO:0030496;midbody;0.0246297910872013!GO:0051656;establishment of organelle localization;0.0246432075707983!GO:0006644;phospholipid metabolic process;0.0246756879539382!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0247741945469942!GO:0042168;heme metabolic process;0.0249155423834094!GO:0000119;mediator complex;0.0252022096143007!GO:0065007;biological regulation;0.0252022096143007!GO:0005732;small nucleolar ribonucleoprotein complex;0.0256892583100477!GO:0022411;cellular component disassembly;0.0257792071700844!GO:0031625;ubiquitin protein ligase binding;0.025866601146253!GO:0006779;porphyrin biosynthetic process;0.025866601146253!GO:0033014;tetrapyrrole biosynthetic process;0.025866601146253!GO:0030119;AP-type membrane coat adaptor complex;0.0261251369823173!GO:0000793;condensed chromosome;0.0263883400156137!GO:0051101;regulation of DNA binding;0.0274663570228746!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0281352400797191!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0285008384194588!GO:0010257;NADH dehydrogenase complex assembly;0.0285008384194588!GO:0033108;mitochondrial respiratory chain complex assembly;0.0285008384194588!GO:0005938;cell cortex;0.0286045881263136!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0286114704715358!GO:0030508;thiol-disulfide exchange intermediate activity;0.0290687830883953!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0290687830883953!GO:0000077;DNA damage checkpoint;0.0291065508572944!GO:0006984;ER-nuclear signaling pathway;0.0297162143104836!GO:0040029;regulation of gene expression, epigenetic;0.0297367321350146!GO:0004722;protein serine/threonine phosphatase activity;0.0297367321350146!GO:0006301;postreplication repair;0.0298609641646882!GO:0016049;cell growth;0.0299247471527781!GO:0030131;clathrin adaptor complex;0.0300867218304075!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0304600310397264!GO:0045039;protein import into mitochondrial inner membrane;0.0304600310397264!GO:0016197;endosome transport;0.0309930361438011!GO:0046983;protein dimerization activity;0.0312668121164908!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0318313623999578!GO:0031371;ubiquitin conjugating enzyme complex;0.0326792674487964!GO:0008415;acyltransferase activity;0.0332447874473612!GO:0007034;vacuolar transport;0.0333316938506621!GO:0005784;translocon complex;0.0334926485831456!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0351974937370663!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0351974937370663!GO:0031901;early endosome membrane;0.0353180712738157!GO:0006519;amino acid and derivative metabolic process;0.0361032143528601!GO:0017134;fibroblast growth factor binding;0.0363973900393954!GO:0008538;proteasome activator activity;0.036476586082672!GO:0043086;negative regulation of catalytic activity;0.0374444105711359!GO:0006360;transcription from RNA polymerase I promoter;0.0374472977324483!GO:0042809;vitamin D receptor binding;0.0381188037038595!GO:0000097;sulfur amino acid biosynthetic process;0.0398384240706849!GO:0030433;ER-associated protein catabolic process;0.040070825034438!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.040070825034438!GO:0017166;vinculin binding;0.0401599143403214!GO:0047485;protein N-terminus binding;0.0408208428053587!GO:0016408;C-acyltransferase activity;0.0412119316534176!GO:0045815;positive regulation of gene expression, epigenetic;0.0422329584417482!GO:0008320;protein transmembrane transporter activity;0.042502419260454!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0428662781484051!GO:0042769;DNA damage response, detection of DNA damage;0.043326103907272!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0441609360412874!GO:0008287;protein serine/threonine phosphatase complex;0.0441968810328122!GO:0022884;macromolecule transmembrane transporter activity;0.04430291301577!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.04430291301577!GO:0006417;regulation of translation;0.0443394194444449!GO:0042054;histone methyltransferase activity;0.0444798618808888!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0450395601535088!GO:0006379;mRNA cleavage;0.046011124894648!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.046011124894648!GO:0030149;sphingolipid catabolic process;0.046080052546429!GO:0009113;purine base biosynthetic process;0.046080052546429!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.046080052546429!GO:0004523;ribonuclease H activity;0.0467924271437916!GO:0030911;TPR domain binding;0.046959245807202!GO:0050178;phenylpyruvate tautomerase activity;0.047551307633936!GO:0016746;transferase activity, transferring acyl groups;0.0477140192959721!GO:0005652;nuclear lamina;0.0484970556854272!GO:0050681;androgen receptor binding;0.0485527527704596!GO:0006564;L-serine biosynthetic process;0.0485860237234337!GO:0016835;carbon-oxygen lyase activity;0.048631668069403!GO:0003887;DNA-directed DNA polymerase activity;0.0487740468717761!GO:0022406;membrane docking;0.0489968673860077!GO:0048278;vesicle docking;0.0489968673860077!GO:0042026;protein refolding;0.0489968673860077!GO:0000805;X chromosome;0.0490963809508304!GO:0001740;Barr body;0.0490963809508304 | |||
|sample_id=10549 | |sample_id=10549 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=stomach | |sample_tissue=stomach | ||
|top_motifs=NKX2-1,4:2.80906551958;LEF1_TCF7_TCF7L1,2:2.1942980726;PBX1:2.01647909049;CRX:2.00517882043;NANOG:1.78384707731;ELK1,4_GABP{A,B1}:1.76087039878;NRF1:1.73508209147;RBPJ:1.71243096849;TFDP1:1.6260105193;HOX{A6,A7,B6,B7}:1.47851365335;NFY{A,B,C}:1.43849716847;CDX1,2,4:1.27484689435;YY1:1.26183264165;ZNF143:1.25813507881;E2F1..5:1.25442509829;bHLH_family:1.25109213428;FOX{I1,J2}:1.06000860117;HOX{A5,B5}:1.03358155818;RFX2..5_RFXANK_RFXAP:1.01823066009;PRRX1,2:1.01246668038;LHX3,4:0.989647678735;MYB:0.987974301576;GFI1:0.895664519139;SOX{8,9,10}:0.88588510949;PAX8:0.881664794724;DBP:0.875874229355;PITX1..3:0.862411809368;FOXA2:0.852589117581;EVI1:0.833027022726;POU3F1..4:0.828729574002;T:0.826074965138;FOXP1:0.783885088232;ESRRA:0.745429070689;SOX17:0.737407722009;RXR{A,B,G}:0.7280081482;POU6F1:0.721232180893;HOX{A4,D4}:0.714966591486;VSX1,2:0.693625035807;POU1F1:0.689991387207;BREu{core}:0.659663218421;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.657428521369;STAT5{A,B}:0.621614921998;ALX1:0.593341988581;SREBF1,2:0.577792259227;PAX4:0.576768908652;TEF:0.551586769895;SOX2:0.49396057609;NR5A1,2:0.472422953218;STAT1,3:0.444417273251;ADNP_IRX_SIX_ZHX:0.440644538381;ONECUT1,2:0.432690810164;TP53:0.424795860062;ZFP161:0.381896874965;ARID5B:0.37577976047;PDX1:0.354416873235;EGR1..3:0.332991291089;MYOD1:0.316789714939;OCT4_SOX2{dimer}:0.29837795651;PATZ1:0.296261650046;NKX2-3_NKX2-5:0.283649535662;HIC1:0.27899821338;FOXN1:0.278773774491;CDC5L:0.267645085431;GZF1:0.247224465536;HBP1_HMGB_SSRP1_UBTF:0.237815158944;ZBTB6:0.217406723168;CREB1:0.210278385242;MZF1:0.188222598277;RFX1:0.177005183282;GATA6:0.160957195138;GTF2A1,2:0.148484346798;ATF4:0.137819467456;MYBL2:0.131110755069;FOXL1:0.127152782523;BPTF:0.125215573827;PPARG:0.114716953645;FOX{D1,D2}:0.10758028374;GFI1B:0.0957474131286;RREB1:0.0922318287471;SNAI1..3:0.0918468947232;MTE{core}:0.0870124735857;ZBTB16:0.0706623491425;NANOG{mouse}:0.0502835713701;SOX5:0.0435404018291;TGIF1:0.0344688189047;ELF1,2,4:0.0270103896105;ZEB1:0.00639251326395;FOXP3:0.00584238916715;FOXQ1:-0.00218259212868;CUX2:-0.00595172095107;PAX5:-0.00760650169067;ZIC1..3:-0.0163157792673;HSF1,2:-0.0172605234896;EN1,2:-0.0257579305391;RORA:-0.039708455658;SP1:-0.0585515171715;HNF4A_NR2F1,2:-0.0619451735736;TOPORS:-0.0673474057801;NKX6-1,2:-0.101216401082;PAX1,9:-0.128134071487;ZNF384:-0.133502643832;ATF5_CREB3:-0.142860761392;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.143004682634;TFAP2B:-0.144664177307;HNF1A:-0.163975227495;TEAD1:-0.186963860124;HAND1,2:-0.197108241091;KLF4:-0.208392303287;XBP1:-0.225788521398;AHR_ARNT_ARNT2:-0.237863703896;NFE2L1:-0.269417690222;PAX2:-0.27209532857;MEF2{A,B,C,D}:-0.286304624633;LMO2:-0.301761038027;IKZF1:-0.308461525868;HLF:-0.309593014705;NR6A1:-0.317128315934;IRF7:-0.327072890788;DMAP1_NCOR{1,2}_SMARC:-0.328335500832;HOXA9_MEIS1:-0.334571694991;ESR1:-0.336173794364;IKZF2:-0.340568459516;TBX4,5:-0.350648846245;POU2F1..3:-0.362220226431;NFKB1_REL_RELA:-0.366189818086;PAX3,7:-0.373364483773;REST:-0.393583756361;NKX2-2,8:-0.39877589928;POU5F1:-0.40102460135;NKX3-2:-0.410850608048;NFE2:-0.423489973548;AIRE:-0.431760441106;ATF2:-0.441207407393;UFEwm:-0.443239616727;FOS_FOS{B,L1}_JUN{B,D}:-0.444916912292;AR:-0.464720692363;GTF2I:-0.470367587174;NR1H4:-0.471422866866;RUNX1..3:-0.471680154946;SPI1:-0.472620284846;MAZ:-0.513160312155;MED-1{core}:-0.524216856374;FOX{F1,F2,J1}:-0.549025552224;NFE2L2:-0.562239634558;TLX1..3_NFIC{dimer}:-0.563699229399;JUN:-0.567085373862;SPIB:-0.591340727012;FOSL2:-0.596899785332;GCM1,2:-0.597044633354;TAL1_TCF{3,4,12}:-0.599326608959;PRDM1:-0.599597970198;FOXO1,3,4:-0.599670670585;XCPE1{core}:-0.609871769466;NFIX:-0.626148686767;SRF:-0.639180188711;BACH2:-0.658035435421;FOXM1:-0.670025089435;HMGA1,2:-0.670514229657;GATA4:-0.672452162851;CEBPA,B_DDIT3:-0.674538891679;ZNF148:-0.691523954147;MYFfamily:-0.691890348757;NFIL3:-0.74019600084;TFCP2:-0.744385343225;NFATC1..3:-0.767036736918;NHLH1,2:-0.767352955602;NR3C1:-0.778522057641;ALX4:-0.809434120769;HES1:-0.813956715049;ETS1,2:-0.841902658797;EBF1:-0.866185025908;PAX6:-0.871212035159;STAT2,4,6:-0.952510565933;IRF1,2:-0.984803399917;SMAD1..7,9:-1.0056705829;TFAP4:-1.0191783331;TFAP2{A,C}:-1.02085144474;FOXD3:-1.06244699808;TLX2:-1.06521978533;TBP:-1.06588571565;MAFB:-1.10303181714;NKX3-1:-1.1042221866;ZNF238:-1.15730410337;RXRA_VDR{dimer}:-1.40601037519;MTF1:-1.43127401424;HIF1A:-1.43253129302;ATF6:-1.613696097;GLI1..3:-1.64395894468;EP300:-1.69484327426;HMX1:-1.79276974059;SPZ1:-1.91453036358;ZNF423:-2.31112388141 | |top_motifs=NKX2-1,4:2.80906551958;LEF1_TCF7_TCF7L1,2:2.1942980726;PBX1:2.01647909049;CRX:2.00517882043;NANOG:1.78384707731;ELK1,4_GABP{A,B1}:1.76087039878;NRF1:1.73508209147;RBPJ:1.71243096849;TFDP1:1.6260105193;HOX{A6,A7,B6,B7}:1.47851365335;NFY{A,B,C}:1.43849716847;CDX1,2,4:1.27484689435;YY1:1.26183264165;ZNF143:1.25813507881;E2F1..5:1.25442509829;bHLH_family:1.25109213428;FOX{I1,J2}:1.06000860117;HOX{A5,B5}:1.03358155818;RFX2..5_RFXANK_RFXAP:1.01823066009;PRRX1,2:1.01246668038;LHX3,4:0.989647678735;MYB:0.987974301576;GFI1:0.895664519139;SOX{8,9,10}:0.88588510949;PAX8:0.881664794724;DBP:0.875874229355;PITX1..3:0.862411809368;FOXA2:0.852589117581;EVI1:0.833027022726;POU3F1..4:0.828729574002;T:0.826074965138;FOXP1:0.783885088232;ESRRA:0.745429070689;SOX17:0.737407722009;RXR{A,B,G}:0.7280081482;POU6F1:0.721232180893;HOX{A4,D4}:0.714966591486;VSX1,2:0.693625035807;POU1F1:0.689991387207;BREu{core}:0.659663218421;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.657428521369;STAT5{A,B}:0.621614921998;ALX1:0.593341988581;SREBF1,2:0.577792259227;PAX4:0.576768908652;TEF:0.551586769895;SOX2:0.49396057609;NR5A1,2:0.472422953218;STAT1,3:0.444417273251;ADNP_IRX_SIX_ZHX:0.440644538381;ONECUT1,2:0.432690810164;TP53:0.424795860062;ZFP161:0.381896874965;ARID5B:0.37577976047;PDX1:0.354416873235;EGR1..3:0.332991291089;MYOD1:0.316789714939;OCT4_SOX2{dimer}:0.29837795651;PATZ1:0.296261650046;NKX2-3_NKX2-5:0.283649535662;HIC1:0.27899821338;FOXN1:0.278773774491;CDC5L:0.267645085431;GZF1:0.247224465536;HBP1_HMGB_SSRP1_UBTF:0.237815158944;ZBTB6:0.217406723168;CREB1:0.210278385242;MZF1:0.188222598277;RFX1:0.177005183282;GATA6:0.160957195138;GTF2A1,2:0.148484346798;ATF4:0.137819467456;MYBL2:0.131110755069;FOXL1:0.127152782523;BPTF:0.125215573827;PPARG:0.114716953645;FOX{D1,D2}:0.10758028374;GFI1B:0.0957474131286;RREB1:0.0922318287471;SNAI1..3:0.0918468947232;MTE{core}:0.0870124735857;ZBTB16:0.0706623491425;NANOG{mouse}:0.0502835713701;SOX5:0.0435404018291;TGIF1:0.0344688189047;ELF1,2,4:0.0270103896105;ZEB1:0.00639251326395;FOXP3:0.00584238916715;FOXQ1:-0.00218259212868;CUX2:-0.00595172095107;PAX5:-0.00760650169067;ZIC1..3:-0.0163157792673;HSF1,2:-0.0172605234896;EN1,2:-0.0257579305391;RORA:-0.039708455658;SP1:-0.0585515171715;HNF4A_NR2F1,2:-0.0619451735736;TOPORS:-0.0673474057801;NKX6-1,2:-0.101216401082;PAX1,9:-0.128134071487;ZNF384:-0.133502643832;ATF5_CREB3:-0.142860761392;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.143004682634;TFAP2B:-0.144664177307;HNF1A:-0.163975227495;TEAD1:-0.186963860124;HAND1,2:-0.197108241091;KLF4:-0.208392303287;XBP1:-0.225788521398;AHR_ARNT_ARNT2:-0.237863703896;NFE2L1:-0.269417690222;PAX2:-0.27209532857;MEF2{A,B,C,D}:-0.286304624633;LMO2:-0.301761038027;IKZF1:-0.308461525868;HLF:-0.309593014705;NR6A1:-0.317128315934;IRF7:-0.327072890788;DMAP1_NCOR{1,2}_SMARC:-0.328335500832;HOXA9_MEIS1:-0.334571694991;ESR1:-0.336173794364;IKZF2:-0.340568459516;TBX4,5:-0.350648846245;POU2F1..3:-0.362220226431;NFKB1_REL_RELA:-0.366189818086;PAX3,7:-0.373364483773;REST:-0.393583756361;NKX2-2,8:-0.39877589928;POU5F1:-0.40102460135;NKX3-2:-0.410850608048;NFE2:-0.423489973548;AIRE:-0.431760441106;ATF2:-0.441207407393;UFEwm:-0.443239616727;FOS_FOS{B,L1}_JUN{B,D}:-0.444916912292;AR:-0.464720692363;GTF2I:-0.470367587174;NR1H4:-0.471422866866;RUNX1..3:-0.471680154946;SPI1:-0.472620284846;MAZ:-0.513160312155;MED-1{core}:-0.524216856374;FOX{F1,F2,J1}:-0.549025552224;NFE2L2:-0.562239634558;TLX1..3_NFIC{dimer}:-0.563699229399;JUN:-0.567085373862;SPIB:-0.591340727012;FOSL2:-0.596899785332;GCM1,2:-0.597044633354;TAL1_TCF{3,4,12}:-0.599326608959;PRDM1:-0.599597970198;FOXO1,3,4:-0.599670670585;XCPE1{core}:-0.609871769466;NFIX:-0.626148686767;SRF:-0.639180188711;BACH2:-0.658035435421;FOXM1:-0.670025089435;HMGA1,2:-0.670514229657;GATA4:-0.672452162851;CEBPA,B_DDIT3:-0.674538891679;ZNF148:-0.691523954147;MYFfamily:-0.691890348757;NFIL3:-0.74019600084;TFCP2:-0.744385343225;NFATC1..3:-0.767036736918;NHLH1,2:-0.767352955602;NR3C1:-0.778522057641;ALX4:-0.809434120769;HES1:-0.813956715049;ETS1,2:-0.841902658797;EBF1:-0.866185025908;PAX6:-0.871212035159;STAT2,4,6:-0.952510565933;IRF1,2:-0.984803399917;SMAD1..7,9:-1.0056705829;TFAP4:-1.0191783331;TFAP2{A,C}:-1.02085144474;FOXD3:-1.06244699808;TLX2:-1.06521978533;TBP:-1.06588571565;MAFB:-1.10303181714;NKX3-1:-1.1042221866;ZNF238:-1.15730410337;RXRA_VDR{dimer}:-1.40601037519;MTF1:-1.43127401424;HIF1A:-1.43253129302;ATF6:-1.613696097;GLI1..3:-1.64395894468;EP300:-1.69484327426;HMX1:-1.79276974059;SPZ1:-1.91453036358;ZNF423:-2.31112388141 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10549-107H9;search_select_hide=table117:FF:10549-107H9 | |||
}} | }} | ||
Latest revision as of 14:28, 3 June 2020
| Name: | gastric cancer cell line:AZ521 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11286 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11286
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11286
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.471 |
| 10 | 10 | 0.414 |
| 100 | 100 | 0.377 |
| 101 | 101 | 0.762 |
| 102 | 102 | 0.76 |
| 103 | 103 | 0.378 |
| 104 | 104 | 0.481 |
| 105 | 105 | 0.865 |
| 106 | 106 | 1.396e-4 |
| 107 | 107 | 0.0206 |
| 108 | 108 | 0.649 |
| 109 | 109 | 0.538 |
| 11 | 11 | 0.29 |
| 110 | 110 | 0.714 |
| 111 | 111 | 0.35 |
| 112 | 112 | 0.0251 |
| 113 | 113 | 0.137 |
| 114 | 114 | 0.111 |
| 115 | 115 | 0.588 |
| 116 | 116 | 0.809 |
| 117 | 117 | 0.718 |
| 118 | 118 | 0.757 |
| 119 | 119 | 0.146 |
| 12 | 12 | 0.715 |
| 120 | 120 | 0.597 |
| 121 | 121 | 0.839 |
| 122 | 122 | 0.905 |
| 123 | 123 | 0.894 |
| 124 | 124 | 0.678 |
| 125 | 125 | 0.745 |
| 126 | 126 | 0.541 |
| 127 | 127 | 0.161 |
| 128 | 128 | 0.00104 |
| 129 | 129 | 0.991 |
| 13 | 13 | 0.598 |
| 130 | 130 | 0.038 |
| 131 | 131 | 0.0186 |
| 132 | 132 | 0.876 |
| 133 | 133 | 0.519 |
| 134 | 134 | 0.521 |
| 135 | 135 | 0.00527 |
| 136 | 136 | 0.246 |
| 137 | 137 | 0.349 |
| 138 | 138 | 0.0368 |
| 139 | 139 | 0.0164 |
| 14 | 14 | 0.704 |
| 140 | 140 | 0.552 |
| 141 | 141 | 0.503 |
| 142 | 142 | 0.75 |
| 143 | 143 | 0.0659 |
| 144 | 144 | 0.586 |
| 145 | 145 | 0.312 |
| 146 | 146 | 0.669 |
| 147 | 147 | 0.38 |
| 148 | 148 | 0.152 |
| 149 | 149 | 0.0593 |
| 15 | 15 | 0.299 |
| 150 | 150 | 0.503 |
| 151 | 151 | 0.0906 |
| 152 | 152 | 0.134 |
| 153 | 153 | 0.296 |
| 154 | 154 | 0.753 |
| 155 | 155 | 0.961 |
| 156 | 156 | 0.415 |
| 157 | 157 | 0.872 |
| 158 | 158 | 0.662 |
| 159 | 159 | 0.462 |
| 16 | 16 | 0.312 |
| 160 | 160 | 0.165 |
| 161 | 161 | 0.853 |
| 162 | 162 | 0.693 |
| 163 | 163 | 0.297 |
| 164 | 164 | 0.352 |
| 165 | 165 | 0.167 |
| 166 | 166 | 1 |
| 167 | 167 | 0.507 |
| 168 | 168 | 0.839 |
| 169 | 169 | 0.00831 |
| 17 | 17 | 0.29 |
| 18 | 18 | 0.208 |
| 19 | 19 | 0.112 |
| 2 | 2 | 0.0924 |
| 20 | 20 | 0.126 |
| 21 | 21 | 0.874 |
| 22 | 22 | 0.154 |
| 23 | 23 | 0.00779 |
| 24 | 24 | 0.786 |
| 25 | 25 | 0.598 |
| 26 | 26 | 0.402 |
| 27 | 27 | 0.0445 |
| 28 | 28 | 0.788 |
| 29 | 29 | 0.886 |
| 3 | 3 | 0.219 |
| 30 | 30 | 0.228 |
| 31 | 31 | 0.662 |
| 32 | 32 | 0.0156 |
| 33 | 33 | 0.708 |
| 34 | 34 | 0.485 |
| 35 | 35 | 0.68 |
| 36 | 36 | 0.9 |
| 37 | 37 | 0.143 |
| 38 | 38 | 0.534 |
| 39 | 39 | 0.367 |
| 4 | 4 | 0.213 |
| 40 | 40 | 0.814 |
| 41 | 41 | 0.348 |
| 42 | 42 | 0.774 |
| 43 | 43 | 0.148 |
| 44 | 44 | 0.158 |
| 45 | 45 | 0.399 |
| 46 | 46 | 0.112 |
| 47 | 47 | 0.8 |
| 48 | 48 | 0.729 |
| 49 | 49 | 0.356 |
| 5 | 5 | 0.242 |
| 50 | 50 | 0.902 |
| 51 | 51 | 0.489 |
| 52 | 52 | 0.0619 |
| 53 | 53 | 0.281 |
| 54 | 54 | 0.467 |
| 55 | 55 | 0.227 |
| 56 | 56 | 0.284 |
| 57 | 57 | 0.848 |
| 58 | 58 | 0.249 |
| 59 | 59 | 0.0404 |
| 6 | 6 | 0.992 |
| 60 | 60 | 0.0171 |
| 61 | 61 | 0.881 |
| 62 | 62 | 0.12 |
| 63 | 63 | 0.312 |
| 64 | 64 | 0.422 |
| 65 | 65 | 0.087 |
| 66 | 66 | 0.0295 |
| 67 | 67 | 0.382 |
| 68 | 68 | 0.13 |
| 69 | 69 | 0.734 |
| 7 | 7 | 0.786 |
| 70 | 70 | 0.165 |
| 71 | 71 | 0.234 |
| 72 | 72 | 0.219 |
| 73 | 73 | 0.309 |
| 74 | 74 | 0.745 |
| 75 | 75 | 0.892 |
| 76 | 76 | 0.585 |
| 77 | 77 | 0.0933 |
| 78 | 78 | 0.977 |
| 79 | 79 | 0.0465 |
| 8 | 8 | 0.392 |
| 80 | 80 | 0.45 |
| 81 | 81 | 0.288 |
| 82 | 82 | 0.0175 |
| 83 | 83 | 0.344 |
| 84 | 84 | 0.657 |
| 85 | 85 | 0.0113 |
| 86 | 86 | 0.616 |
| 87 | 87 | 0.822 |
| 88 | 88 | 0.528 |
| 89 | 89 | 0.0591 |
| 9 | 9 | 0.0581 |
| 90 | 90 | 0.484 |
| 91 | 91 | 0.0242 |
| 92 | 92 | 0.16 |
| 93 | 93 | 0.802 |
| 94 | 94 | 0.171 |
| 95 | 95 | 0.607 |
| 96 | 96 | 0.37 |
| 97 | 97 | 0.784 |
| 98 | 98 | 0.194 |
| 99 | 99 | 0.781 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11286
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100787 gastric cancer cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3119 (gastrointestinal system cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000945 (stomach)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010039 (food storage organ)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0005409 (gastrointestinal system)
0001041 (foregut)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100787 (gastric cancer cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
