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{{f5samples
{{f5samples
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|accession_numbers=CAGE;DRX008032;DRR008904;DRZ000329;DRZ001714;DRZ011679;DRZ013064
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|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101522
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|def=
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Line 35: Line 41:
|fonse_treatment_closure=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/xeroderma%2520pigentosum%2520b%2520cell%2520line%253aXPL%252017.CNhs11813.10563-108A5.hg19.ctss.bed.gz
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|id=FF:10563-108A5
|id=FF:10563-108A5
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|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10563
|name=xeroderma pigentosum b cell line:XPL 17
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Line 42: Line 60:
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|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=71.10985
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|sample_age=
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=RCB2286
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|sample_cell_line=XPL 17
|sample_cell_line=XPL 17
Line 69: Line 91:
|sample_ethnicity=
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|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.89731291323638e-257!GO:0043227;membrane-bound organelle;1.47602913130198e-216!GO:0043231;intracellular membrane-bound organelle;3.41315359984354e-216!GO:0043226;organelle;3.43748975720541e-212!GO:0043229;intracellular organelle;2.16686521039902e-211!GO:0005737;cytoplasm;1.10962408695004e-188!GO:0044422;organelle part;1.32291241864354e-148!GO:0044446;intracellular organelle part;1.20807885254649e-146!GO:0044444;cytoplasmic part;5.46013997808856e-129!GO:0032991;macromolecular complex;1.62428527059227e-111!GO:0044237;cellular metabolic process;5.26989982569517e-103!GO:0044238;primary metabolic process;1.48428419595497e-100!GO:0030529;ribonucleoprotein complex;1.31192757478102e-96!GO:0005634;nucleus;8.43797409237964e-95!GO:0043170;macromolecule metabolic process;3.70391160656187e-92!GO:0005739;mitochondrion;1.46461260580249e-85!GO:0003723;RNA binding;8.86108688526648e-85!GO:0044428;nuclear part;1.90317856965395e-83!GO:0043233;organelle lumen;5.96822070872478e-83!GO:0031974;membrane-enclosed lumen;5.96822070872478e-83!GO:0005515;protein binding;6.52902169533238e-69!GO:0006412;translation;1.33897915620147e-65!GO:0044429;mitochondrial part;1.68425508944268e-59!GO:0043283;biopolymer metabolic process;4.91794993368702e-58!GO:0006396;RNA processing;1.89940084434717e-57!GO:0005840;ribosome;1.03928786830004e-56!GO:0043234;protein complex;5.15285834880531e-56!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.84590646366974e-53!GO:0010467;gene expression;5.03002834019647e-53!GO:0031967;organelle envelope;1.01273036163908e-50!GO:0031975;envelope;2.67533173324989e-50!GO:0019538;protein metabolic process;4.44654888232853e-50!GO:0031981;nuclear lumen;1.1880657731109e-49!GO:0003735;structural constituent of ribosome;1.59569766845176e-49!GO:0044249;cellular biosynthetic process;6.40421045512035e-49!GO:0031090;organelle membrane;1.48606721878142e-48!GO:0009058;biosynthetic process;2.83112291272926e-47!GO:0016071;mRNA metabolic process;2.64823708858295e-45!GO:0044267;cellular protein metabolic process;3.0323691004245e-45!GO:0033036;macromolecule localization;3.20191672770728e-45!GO:0044260;cellular macromolecule metabolic process;4.63135209569115e-45!GO:0009059;macromolecule biosynthetic process;9.31288349527578e-45!GO:0033279;ribosomal subunit;2.99677471627846e-43!GO:0015031;protein transport;4.02556217767379e-43!GO:0045184;establishment of protein localization;7.35028809925314e-42!GO:0005829;cytosol;8.11178639910096e-42!GO:0008104;protein localization;1.28121323891144e-41!GO:0008380;RNA splicing;8.62340882695164e-40!GO:0006397;mRNA processing;9.06393877511414e-39!GO:0016043;cellular component organization and biogenesis;9.99535984789311e-38!GO:0005740;mitochondrial envelope;1.02345709395568e-36!GO:0046907;intracellular transport;1.42015861585079e-36!GO:0006259;DNA metabolic process;6.53814437836949e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.87323474656881e-34!GO:0006996;organelle organization and biogenesis;7.10077397812209e-34!GO:0031966;mitochondrial membrane;1.01704408775006e-33!GO:0065003;macromolecular complex assembly;3.90972525578958e-33!GO:0019866;organelle inner membrane;5.32566470287905e-33!GO:0003676;nucleic acid binding;8.43261192461505e-33!GO:0006886;intracellular protein transport;5.01155917526696e-32!GO:0000166;nucleotide binding;7.56454613659258e-32!GO:0043228;non-membrane-bound organelle;5.81849566312863e-31!GO:0043232;intracellular non-membrane-bound organelle;5.81849566312863e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.09088428576811e-30!GO:0005743;mitochondrial inner membrane;1.74310420659794e-30!GO:0005654;nucleoplasm;4.45606748189633e-30!GO:0005681;spliceosome;7.28687445466607e-30!GO:0022607;cellular component assembly;6.90742461306901e-29!GO:0044445;cytosolic part;3.49217519216877e-28!GO:0051649;establishment of cellular localization;1.07299230413121e-27!GO:0051641;cellular localization;2.70467698884437e-27!GO:0031980;mitochondrial lumen;1.11338346745337e-26!GO:0005759;mitochondrial matrix;1.11338346745337e-26!GO:0007049;cell cycle;3.7544477464043e-26!GO:0012501;programmed cell death;2.80637651503562e-25!GO:0006915;apoptosis;3.00846437086343e-25!GO:0016070;RNA metabolic process;4.07741859603888e-24!GO:0006119;oxidative phosphorylation;1.00974127762208e-23!GO:0032553;ribonucleotide binding;1.16332290891501e-23!GO:0032555;purine ribonucleotide binding;1.16332290891501e-23!GO:0017076;purine nucleotide binding;2.45872070297478e-23!GO:0044455;mitochondrial membrane part;4.67829811029086e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.78504193951782e-23!GO:0016462;pyrophosphatase activity;4.99720746720409e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;6.42646546936109e-23!GO:0017111;nucleoside-triphosphatase activity;1.10167595615748e-22!GO:0044451;nucleoplasm part;1.10201364272053e-22!GO:0044265;cellular macromolecule catabolic process;2.26558540208268e-22!GO:0015934;large ribosomal subunit;2.5345537681762e-22!GO:0006974;response to DNA damage stimulus;2.71854354733564e-22!GO:0008219;cell death;3.71374982047382e-22!GO:0016265;death;3.71374982047382e-22!GO:0015935;small ribosomal subunit;4.48031533812046e-22!GO:0006512;ubiquitin cycle;7.74305844279185e-22!GO:0005730;nucleolus;3.42296193692611e-21!GO:0022402;cell cycle process;4.10507195141735e-21!GO:0016874;ligase activity;1.74073873304249e-20!GO:0005524;ATP binding;2.3776155442282e-19!GO:0044248;cellular catabolic process;2.5537189473847e-19!GO:0005746;mitochondrial respiratory chain;7.78919057669551e-19!GO:0022618;protein-RNA complex assembly;9.05675338513409e-19!GO:0032559;adenyl ribonucleotide binding;9.09819922658157e-19!GO:0006281;DNA repair;1.43867516462818e-18!GO:0008134;transcription factor binding;1.60192067213316e-18!GO:0009057;macromolecule catabolic process;2.14588681624065e-18!GO:0030554;adenyl nucleotide binding;2.61021976901132e-18!GO:0005694;chromosome;2.89115798120298e-18!GO:0043285;biopolymer catabolic process;3.83072788475971e-18!GO:0006457;protein folding;4.20405891493542e-18!GO:0042981;regulation of apoptosis;6.16030451078743e-18!GO:0051186;cofactor metabolic process;6.16030451078743e-18!GO:0043067;regulation of programmed cell death;1.05313851411119e-17!GO:0000278;mitotic cell cycle;1.36096720898195e-17!GO:0000502;proteasome complex (sensu Eukaryota);1.45472124482622e-17!GO:0019941;modification-dependent protein catabolic process;2.06109418907176e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.06109418907176e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.16769853659141e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.2463691362902e-17!GO:0006511;ubiquitin-dependent protein catabolic process;5.30472352919678e-17!GO:0044257;cellular protein catabolic process;6.22391464594376e-17!GO:0012505;endomembrane system;7.4807853810319e-17!GO:0006605;protein targeting;7.86131388380312e-17!GO:0005761;mitochondrial ribosome;8.16283306268403e-17!GO:0000313;organellar ribosome;8.16283306268403e-17!GO:0044427;chromosomal part;1.32196694705688e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.4473549918705e-16!GO:0003954;NADH dehydrogenase activity;1.4473549918705e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.4473549918705e-16!GO:0051276;chromosome organization and biogenesis;1.89236758884451e-16!GO:0042254;ribosome biogenesis and assembly;4.09207134404831e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.33960730007192e-16!GO:0043412;biopolymer modification;5.56234857795049e-16!GO:0005635;nuclear envelope;2.47657959604724e-15!GO:0008135;translation factor activity, nucleic acid binding;2.68798638728358e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.69901013418667e-15!GO:0005783;endoplasmic reticulum;3.57345486050744e-15!GO:0022403;cell cycle phase;3.932801299739e-15!GO:0016604;nuclear body;4.62131114271939e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;5.77890155700207e-15!GO:0000375;RNA splicing, via transesterification reactions;5.77890155700207e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.77890155700207e-15!GO:0042775;organelle ATP synthesis coupled electron transport;5.99101579244231e-15!GO:0042773;ATP synthesis coupled electron transport;5.99101579244231e-15!GO:0030964;NADH dehydrogenase complex (quinone);1.58971354895334e-14!GO:0045271;respiratory chain complex I;1.58971354895334e-14!GO:0005747;mitochondrial respiratory chain complex I;1.58971354895334e-14!GO:0007067;mitosis;1.80644694403231e-14!GO:0000087;M phase of mitotic cell cycle;2.07007423584304e-14!GO:0009719;response to endogenous stimulus;2.38411651815268e-14!GO:0048770;pigment granule;2.5104697778291e-14!GO:0042470;melanosome;2.5104697778291e-14!GO:0006732;coenzyme metabolic process;2.60139139733206e-14!GO:0006913;nucleocytoplasmic transport;3.01703687345956e-14!GO:0016887;ATPase activity;4.31823265532918e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.17298165749577e-14!GO:0031965;nuclear membrane;5.35418403007029e-14!GO:0051169;nuclear transport;6.41813201186944e-14!GO:0006464;protein modification process;6.92786279781626e-14!GO:0042623;ATPase activity, coupled;8.44082401534588e-14!GO:0043687;post-translational protein modification;9.63411358230739e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.69566860172751e-14!GO:0030163;protein catabolic process;3.81605680783204e-13!GO:0000279;M phase;5.45980695346616e-13!GO:0051082;unfolded protein binding;7.64978427335442e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;8.91063821260297e-13!GO:0051301;cell division;1.33223580745398e-12!GO:0006260;DNA replication;1.37125535630331e-12!GO:0004386;helicase activity;3.27837350299285e-12!GO:0006323;DNA packaging;3.39248457742347e-12!GO:0051726;regulation of cell cycle;3.54766510626396e-12!GO:0044453;nuclear membrane part;4.76684230530336e-12!GO:0044432;endoplasmic reticulum part;5.25516240396335e-12!GO:0000074;regulation of progression through cell cycle;5.36894564453754e-12!GO:0003712;transcription cofactor activity;7.16042712161354e-12!GO:0006399;tRNA metabolic process;7.30761989322993e-12!GO:0006413;translational initiation;7.59234951928647e-12!GO:0009615;response to virus;1.2483844951757e-11!GO:0006446;regulation of translational initiation;1.78397075138008e-11!GO:0006333;chromatin assembly or disassembly;3.21700118005298e-11!GO:0003743;translation initiation factor activity;3.45697568755901e-11!GO:0048193;Golgi vesicle transport;3.49070920009103e-11!GO:0017038;protein import;3.49962855453941e-11!GO:0009056;catabolic process;3.57162379700899e-11!GO:0006364;rRNA processing;3.83710663507797e-11!GO:0016607;nuclear speck;4.12623158201873e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.74688391513794e-11!GO:0009055;electron carrier activity;5.17048699990019e-11!GO:0016072;rRNA metabolic process;6.64600016358211e-11!GO:0009259;ribonucleotide metabolic process;8.28966276316469e-11!GO:0006163;purine nucleotide metabolic process;8.42482068253185e-11!GO:0006916;anti-apoptosis;1.16577422784407e-10!GO:0008026;ATP-dependent helicase activity;1.22070767639748e-10!GO:0006164;purine nucleotide biosynthetic process;1.22070767639748e-10!GO:0065002;intracellular protein transport across a membrane;1.25400564643378e-10!GO:0008639;small protein conjugating enzyme activity;1.34906413915654e-10!GO:0051188;cofactor biosynthetic process;1.51948899552358e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.66316633742692e-10!GO:0005643;nuclear pore;1.69816553052768e-10!GO:0000785;chromatin;1.95667778245774e-10!GO:0050794;regulation of cellular process;2.22443185787811e-10!GO:0004842;ubiquitin-protein ligase activity;2.37305358756919e-10!GO:0009260;ribonucleotide biosynthetic process;2.37688009684636e-10!GO:0051246;regulation of protein metabolic process;2.38016672126254e-10!GO:0019787;small conjugating protein ligase activity;3.29782216055009e-10!GO:0065004;protein-DNA complex assembly;4.91148566381555e-10!GO:0009150;purine ribonucleotide metabolic process;5.14586141954132e-10!GO:0050657;nucleic acid transport;7.20578296928108e-10!GO:0051236;establishment of RNA localization;7.20578296928108e-10!GO:0050658;RNA transport;7.20578296928108e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.41639763353823e-10!GO:0006403;RNA localization;8.5743912309542e-10!GO:0005794;Golgi apparatus;9.92194543689551e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.00491277638501e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.01645072879088e-09!GO:0015078;hydrogen ion transmembrane transporter activity;1.01667860824734e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.10145981196289e-09!GO:0016192;vesicle-mediated transport;1.13734407912754e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.14884764398322e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.15681722634695e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.15681722634695e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.15681722634695e-09!GO:0007243;protein kinase cascade;1.18340152977788e-09!GO:0007005;mitochondrion organization and biogenesis;1.22017333575088e-09!GO:0005789;endoplasmic reticulum membrane;1.24463117865196e-09!GO:0043038;amino acid activation;1.52008886782303e-09!GO:0006418;tRNA aminoacylation for protein translation;1.52008886782303e-09!GO:0043039;tRNA aminoacylation;1.52008886782303e-09!GO:0043069;negative regulation of programmed cell death;1.5719207613707e-09!GO:0043066;negative regulation of apoptosis;1.91483590015146e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.67534239676462e-09!GO:0030532;small nuclear ribonucleoprotein complex;2.91029037460468e-09!GO:0043065;positive regulation of apoptosis;2.91195302834259e-09!GO:0009060;aerobic respiration;3.62026020691133e-09!GO:0008565;protein transporter activity;3.66572316896078e-09!GO:0016779;nucleotidyltransferase activity;4.29291852825179e-09!GO:0043068;positive regulation of programmed cell death;4.61760734861912e-09!GO:0046930;pore complex;6.29727401917093e-09!GO:0006461;protein complex assembly;7.03139770745474e-09!GO:0006793;phosphorus metabolic process;7.68181149268481e-09!GO:0006796;phosphate metabolic process;7.68181149268481e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.70004408929826e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.9564238618367e-09!GO:0006917;induction of apoptosis;1.05407978253925e-08!GO:0003697;single-stranded DNA binding;1.32236671800387e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.48176193684115e-08!GO:0016787;hydrolase activity;1.6519205128878e-08!GO:0016881;acid-amino acid ligase activity;1.71312305705443e-08!GO:0012502;induction of programmed cell death;1.84593960463369e-08!GO:0009108;coenzyme biosynthetic process;2.28319870933413e-08!GO:0051028;mRNA transport;2.69191593927301e-08!GO:0045333;cellular respiration;2.71493597293468e-08!GO:0019829;cation-transporting ATPase activity;2.71493597293468e-08!GO:0015986;ATP synthesis coupled proton transport;2.99463443460888e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.99463443460888e-08!GO:0005768;endosome;3.02573466366868e-08!GO:0016310;phosphorylation;4.33177522045713e-08!GO:0043566;structure-specific DNA binding;4.45953978127348e-08!GO:0016568;chromatin modification;4.61685186538394e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.04887210168869e-08!GO:0009117;nucleotide metabolic process;5.36892376308456e-08!GO:0030120;vesicle coat;6.48235291676671e-08!GO:0030662;coated vesicle membrane;6.48235291676671e-08!GO:0006366;transcription from RNA polymerase II promoter;6.65271058470551e-08!GO:0003924;GTPase activity;7.25749493473744e-08!GO:0051170;nuclear import;8.32173729397179e-08!GO:0004298;threonine endopeptidase activity;9.17903475955635e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.21372424662944e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.21372424662944e-08!GO:0019899;enzyme binding;1.06406736255181e-07!GO:0016740;transferase activity;1.2020435039076e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.41870970860486e-07!GO:0006099;tricarboxylic acid cycle;1.52421746180836e-07!GO:0046356;acetyl-CoA catabolic process;1.52421746180836e-07!GO:0005525;GTP binding;1.53551287802464e-07!GO:0009141;nucleoside triphosphate metabolic process;1.55141388459592e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.6013616026774e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.6013616026774e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.67451808499406e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.78167670791812e-07!GO:0006606;protein import into nucleus;1.92534269591385e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.41654482105381e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.41654482105381e-07!GO:0006334;nucleosome assembly;2.51698778309041e-07!GO:0051187;cofactor catabolic process;2.7555030597141e-07!GO:0006084;acetyl-CoA metabolic process;3.04076792957407e-07!GO:0006754;ATP biosynthetic process;3.31935367579394e-07!GO:0006753;nucleoside phosphate metabolic process;3.31935367579394e-07!GO:0031497;chromatin assembly;3.38406187166805e-07!GO:0045259;proton-transporting ATP synthase complex;3.45883172277441e-07!GO:0048475;coated membrane;3.53796662606705e-07!GO:0030117;membrane coat;3.53796662606705e-07!GO:0003713;transcription coactivator activity;3.7939374098169e-07!GO:0005770;late endosome;4.0213587956149e-07!GO:0006417;regulation of translation;4.4855359569368e-07!GO:0016469;proton-transporting two-sector ATPase complex;5.36455999575806e-07!GO:0005773;vacuole;5.81164204318773e-07!GO:0048523;negative regulation of cellular process;6.3646720843818e-07!GO:0006752;group transfer coenzyme metabolic process;6.3646720843818e-07!GO:0000323;lytic vacuole;7.29499227263547e-07!GO:0005764;lysosome;7.29499227263547e-07!GO:0046034;ATP metabolic process;7.30576016939306e-07!GO:0006261;DNA-dependent DNA replication;8.42947185600687e-07!GO:0009109;coenzyme catabolic process;9.8778994777961e-07!GO:0050789;regulation of biological process;9.94402454238126e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.01023577642614e-06!GO:0005793;ER-Golgi intermediate compartment;1.17633130375389e-06!GO:0048522;positive regulation of cellular process;1.19391161607695e-06!GO:0032446;protein modification by small protein conjugation;1.32961028431751e-06!GO:0019222;regulation of metabolic process;1.62288577810651e-06!GO:0000245;spliceosome assembly;2.65342789869409e-06!GO:0009165;nucleotide biosynthetic process;2.92509218475056e-06!GO:0016567;protein ubiquitination;2.92923533305503e-06!GO:0032561;guanyl ribonucleotide binding;3.70154944352816e-06!GO:0019001;guanyl nucleotide binding;3.70154944352816e-06!GO:0016563;transcription activator activity;4.02306135901888e-06!GO:0016491;oxidoreductase activity;4.38857972785911e-06!GO:0005762;mitochondrial large ribosomal subunit;4.40432232299864e-06!GO:0000315;organellar large ribosomal subunit;4.40432232299864e-06!GO:0031326;regulation of cellular biosynthetic process;6.895439163192e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.29834249310666e-06!GO:0065009;regulation of a molecular function;9.27809236375224e-06!GO:0003724;RNA helicase activity;9.38576911298202e-06!GO:0006401;RNA catabolic process;1.00579021284965e-05!GO:0048519;negative regulation of biological process;1.30741973468006e-05!GO:0009967;positive regulation of signal transduction;1.33669953461553e-05!GO:0006613;cotranslational protein targeting to membrane;1.43508413406905e-05!GO:0000314;organellar small ribosomal subunit;1.43775005813966e-05!GO:0005763;mitochondrial small ribosomal subunit;1.43775005813966e-05!GO:0003899;DNA-directed RNA polymerase activity;1.55924925295537e-05!GO:0051168;nuclear export;1.57107614336272e-05!GO:0005798;Golgi-associated vesicle;1.7637009917567e-05!GO:0008632;apoptotic program;2.03698344582912e-05!GO:0006310;DNA recombination;2.09174854974406e-05!GO:0015630;microtubule cytoskeleton;2.44640579836817e-05!GO:0007006;mitochondrial membrane organization and biogenesis;2.64654490701243e-05!GO:0045786;negative regulation of progression through cell cycle;2.70457531010698e-05!GO:0006091;generation of precursor metabolites and energy;2.71667667788101e-05!GO:0005819;spindle;3.23383819819811e-05!GO:0044440;endosomal part;3.74796021938294e-05!GO:0010008;endosome membrane;3.74796021938294e-05!GO:0043623;cellular protein complex assembly;3.87249418631357e-05!GO:0005741;mitochondrial outer membrane;4.14764796475818e-05!GO:0016564;transcription repressor activity;4.2265148795698e-05!GO:0005813;centrosome;4.74841401222229e-05!GO:0043021;ribonucleoprotein binding;5.32820809879771e-05!GO:0006839;mitochondrial transport;5.52252029873317e-05!GO:0000151;ubiquitin ligase complex;5.54590623268347e-05!GO:0030658;transport vesicle membrane;5.67089876964871e-05!GO:0031968;organelle outer membrane;5.78260122843732e-05!GO:0048518;positive regulation of biological process;5.99374072568047e-05!GO:0031323;regulation of cellular metabolic process;6.6980866633666e-05!GO:0031072;heat shock protein binding;8.2659993797755e-05!GO:0009889;regulation of biosynthetic process;8.76890404695321e-05!GO:0051427;hormone receptor binding;8.99604793936591e-05!GO:0019867;outer membrane;9.1693873728735e-05!GO:0008094;DNA-dependent ATPase activity;9.72859992393676e-05!GO:0043681;protein import into mitochondrion;9.88434286816982e-05!GO:0003714;transcription corepressor activity;0.000105462339451658!GO:0005815;microtubule organizing center;0.00010928958553829!GO:0005667;transcription factor complex;0.00011197818685027!GO:0016853;isomerase activity;0.000113128130996283!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00011676832836502!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000118758463832924!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000124857675963557!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000150209188832115!GO:0015399;primary active transmembrane transporter activity;0.000150209188832115!GO:0005657;replication fork;0.000152980442337629!GO:0035257;nuclear hormone receptor binding;0.000182238630156517!GO:0007088;regulation of mitosis;0.000183460932803269!GO:0005885;Arp2/3 protein complex;0.000183762031572177!GO:0008186;RNA-dependent ATPase activity;0.000186018438166442!GO:0000075;cell cycle checkpoint;0.000192074970275316!GO:0051325;interphase;0.000196952634188902!GO:0006402;mRNA catabolic process;0.000198169294287843!GO:0016126;sterol biosynthetic process;0.000200021317274091!GO:0000786;nucleosome;0.000207543574733696!GO:0000775;chromosome, pericentric region;0.000208155856534025!GO:0030660;Golgi-associated vesicle membrane;0.000209124900642313!GO:0006626;protein targeting to mitochondrion;0.000241032275380596!GO:0007242;intracellular signaling cascade;0.000253859552817905!GO:0007051;spindle organization and biogenesis;0.000262821872205056!GO:0008654;phospholipid biosynthetic process;0.000263692058533188!GO:0019752;carboxylic acid metabolic process;0.000265534826818233!GO:0051252;regulation of RNA metabolic process;0.000280269572469511!GO:0003678;DNA helicase activity;0.000336018201342359!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000340839510287736!GO:0006612;protein targeting to membrane;0.000348340480513726!GO:0051329;interphase of mitotic cell cycle;0.000355275722297485!GO:0006082;organic acid metabolic process;0.000364692208581592!GO:0005048;signal sequence binding;0.000375791843802877!GO:0051789;response to protein stimulus;0.000421819239803724!GO:0006986;response to unfolded protein;0.000421819239803724!GO:0008033;tRNA processing;0.000427444270185348!GO:0016363;nuclear matrix;0.000479849320855313!GO:0016741;transferase activity, transferring one-carbon groups;0.000480880979390828!GO:0031324;negative regulation of cellular metabolic process;0.000499248166567053!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000524583954711079!GO:0044452;nucleolar part;0.000536754033557591!GO:0003684;damaged DNA binding;0.000541666725271834!GO:0004004;ATP-dependent RNA helicase activity;0.000547342830838849!GO:0045454;cell redox homeostasis;0.000547342830838849!GO:0048468;cell development;0.000552599935662918!GO:0008637;apoptotic mitochondrial changes;0.00062206888587005!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000634240498245955!GO:0003729;mRNA binding;0.000653550725961587!GO:0022890;inorganic cation transmembrane transporter activity;0.000661305023689162!GO:0006302;double-strand break repair;0.000665348685288846!GO:0005758;mitochondrial intermembrane space;0.000699344276268938!GO:0051223;regulation of protein transport;0.000701828409707747!GO:0004527;exonuclease activity;0.000708903906792816!GO:0046483;heterocycle metabolic process;0.000712640094716228!GO:0015992;proton transport;0.000730449791741086!GO:0003725;double-stranded RNA binding;0.000734900554122764!GO:0006414;translational elongation;0.000754447630692746!GO:0046822;regulation of nucleocytoplasmic transport;0.00076047908949711!GO:0044431;Golgi apparatus part;0.000796188061157097!GO:0005774;vacuolar membrane;0.000796188061157097!GO:0051052;regulation of DNA metabolic process;0.000806111107518871!GO:0004518;nuclease activity;0.000832950548171274!GO:0043488;regulation of mRNA stability;0.000839733833435442!GO:0043487;regulation of RNA stability;0.000839733833435442!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000850913221286877!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000850913221286877!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000850913221286877!GO:0008168;methyltransferase activity;0.000858293020878872!GO:0031902;late endosome membrane;0.00087681084439809!GO:0006818;hydrogen transport;0.000892193302794475!GO:0065007;biological regulation;0.000899450858841461!GO:0031252;leading edge;0.00092152832800401!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000929552339045879!GO:0006891;intra-Golgi vesicle-mediated transport;0.000933895615023044!GO:0016859;cis-trans isomerase activity;0.000943430076232572!GO:0005684;U2-dependent spliceosome;0.000953271110288292!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000982797041857942!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000982797041857942!GO:0006383;transcription from RNA polymerase III promoter;0.000982854098412132!GO:0006350;transcription;0.000995687481773172!GO:0030880;RNA polymerase complex;0.00101695364638386!GO:0000776;kinetochore;0.00108451578433259!GO:0042113;B cell activation;0.00109563932682457!GO:0000049;tRNA binding;0.00111115918118374!GO:0004674;protein serine/threonine kinase activity;0.00111442823580073!GO:0006520;amino acid metabolic process;0.00118395756198792!GO:0048471;perinuclear region of cytoplasm;0.00122023678901484!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00128904023469094!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00129443433227837!GO:0016251;general RNA polymerase II transcription factor activity;0.00130937096850809!GO:0006352;transcription initiation;0.00132486675200872!GO:0043492;ATPase activity, coupled to movement of substances;0.00141606761789946!GO:0015980;energy derivation by oxidation of organic compounds;0.00142971123752482!GO:0003690;double-stranded DNA binding;0.00144864727132746!GO:0006611;protein export from nucleus;0.00144864727132746!GO:0010468;regulation of gene expression;0.0014785378532044!GO:0007059;chromosome segregation;0.00161526605858934!GO:0005765;lysosomal membrane;0.00162318924046431!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.001638784148243!GO:0006007;glucose catabolic process;0.00164095197474204!GO:0006950;response to stress;0.00164401307228809!GO:0006695;cholesterol biosynthetic process;0.00173450457229192!GO:0008047;enzyme activator activity;0.00177334014326281!GO:0030867;rough endoplasmic reticulum membrane;0.00177334014326281!GO:0031988;membrane-bound vesicle;0.00177757126915448!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0018347055301686!GO:0015002;heme-copper terminal oxidase activity;0.0018347055301686!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0018347055301686!GO:0004129;cytochrome-c oxidase activity;0.0018347055301686!GO:0046649;lymphocyte activation;0.00194256580665278!GO:0048500;signal recognition particle;0.00198378107371795!GO:0046966;thyroid hormone receptor binding;0.00200994169768788!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0020113411938835!GO:0044437;vacuolar part;0.00201245010827357!GO:0019904;protein domain specific binding;0.00202210631718666!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00205192203972915!GO:0000428;DNA-directed RNA polymerase complex;0.00205192203972915!GO:0031970;organelle envelope lumen;0.00205980140247431!GO:0050790;regulation of catalytic activity;0.00210646768123634!GO:0051920;peroxiredoxin activity;0.00221734092910356!GO:0005769;early endosome;0.00221875481925279!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00222626047774528!GO:0031982;vesicle;0.00224639752436097!GO:0030384;phosphoinositide metabolic process;0.00226224803572229!GO:0051092;activation of NF-kappaB transcription factor;0.00238294814292277!GO:0016197;endosome transport;0.00244748051112998!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00276464409806264!GO:0005637;nuclear inner membrane;0.00293619303739959!GO:0009124;nucleoside monophosphate biosynthetic process;0.00302132527489175!GO:0009123;nucleoside monophosphate metabolic process;0.00302132527489175!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00307517618326158!GO:0033116;ER-Golgi intermediate compartment membrane;0.00312764893027181!GO:0006778;porphyrin metabolic process;0.00312764893027181!GO:0033013;tetrapyrrole metabolic process;0.00312764893027181!GO:0016272;prefoldin complex;0.00314974705549227!GO:0004532;exoribonuclease activity;0.00325548528066906!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00325548528066906!GO:0007093;mitotic cell cycle checkpoint;0.0033315324000024!GO:0030133;transport vesicle;0.00347481519846401!GO:0008139;nuclear localization sequence binding;0.00367589068407271!GO:0016023;cytoplasmic membrane-bound vesicle;0.0036956300350643!GO:0032508;DNA duplex unwinding;0.00371808586967607!GO:0032392;DNA geometric change;0.00371808586967607!GO:0030118;clathrin coat;0.00378749187268473!GO:0042802;identical protein binding;0.00379729036921843!GO:0006650;glycerophospholipid metabolic process;0.00382976918349323!GO:0006595;polyamine metabolic process;0.00398159162089018!GO:0030127;COPII vesicle coat;0.00421952364389844!GO:0012507;ER to Golgi transport vesicle membrane;0.00421952364389844!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00430815189938448!GO:0045047;protein targeting to ER;0.00430815189938448!GO:0005788;endoplasmic reticulum lumen;0.0043221528115138!GO:0051235;maintenance of localization;0.00460299503989326!GO:0046365;monosaccharide catabolic process;0.00463877641567411!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00471509908778934!GO:0030134;ER to Golgi transport vesicle;0.00475289433916243!GO:0006769;nicotinamide metabolic process;0.00478147663771831!GO:0008234;cysteine-type peptidase activity;0.00479419815317479!GO:0006289;nucleotide-excision repair;0.00487065055142788!GO:0008312;7S RNA binding;0.0051029533986662!GO:0030433;ER-associated protein catabolic process;0.00529234163817203!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00529234163817203!GO:0030663;COPI coated vesicle membrane;0.005300294888236!GO:0030126;COPI vesicle coat;0.005300294888236!GO:0003682;chromatin binding;0.005300294888236!GO:0006733;oxidoreduction coenzyme metabolic process;0.00543123473606483!GO:0030125;clathrin vesicle coat;0.00548203315066751!GO:0030665;clathrin coated vesicle membrane;0.00548203315066751!GO:0016481;negative regulation of transcription;0.00560063246295645!GO:0000059;protein import into nucleus, docking;0.00568795168495779!GO:0003746;translation elongation factor activity;0.00576593755156931!GO:0006405;RNA export from nucleus;0.00586509172420748!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00598924739828985!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00605201178742906!GO:0051098;regulation of binding;0.00605201178742906!GO:0047485;protein N-terminus binding;0.0060998933113666!GO:0009161;ribonucleoside monophosphate metabolic process;0.00614576036580685!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00614576036580685!GO:0031410;cytoplasmic vesicle;0.00616164563908689!GO:0042168;heme metabolic process;0.00616164563908689!GO:0006268;DNA unwinding during replication;0.00620036958062909!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00620036958062909!GO:0031124;mRNA 3'-end processing;0.00628295450308738!GO:0008408;3'-5' exonuclease activity;0.00654331046937939!GO:0006338;chromatin remodeling;0.00696534365759723!GO:0003711;transcription elongation regulator activity;0.00704181008578855!GO:0046489;phosphoinositide biosynthetic process;0.00708804002869905!GO:0030137;COPI-coated vesicle;0.00715112544292635!GO:0043022;ribosome binding;0.00718378973541346!GO:0044262;cellular carbohydrate metabolic process;0.00718572270621355!GO:0048487;beta-tubulin binding;0.00734333229313446!GO:0033673;negative regulation of kinase activity;0.00750557377456953!GO:0006469;negative regulation of protein kinase activity;0.00750557377456953!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00751303913915787!GO:0019320;hexose catabolic process;0.00751303913915787!GO:0008610;lipid biosynthetic process;0.00760627344803559!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00781535963010514!GO:0009892;negative regulation of metabolic process;0.00783561638793701!GO:0007050;cell cycle arrest;0.00794663936341368!GO:0032200;telomere organization and biogenesis;0.00794663936341368!GO:0000723;telomere maintenance;0.00794663936341368!GO:0007264;small GTPase mediated signal transduction;0.00800746468539188!GO:0000082;G1/S transition of mitotic cell cycle;0.00803855850699608!GO:0000339;RNA cap binding;0.00844109344040327!GO:0016584;nucleosome positioning;0.00856945865400383!GO:0051348;negative regulation of transferase activity;0.00873456556265355!GO:0000209;protein polyubiquitination;0.00889443846192585!GO:0000178;exosome (RNase complex);0.00895252554097382!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.008989009727604!GO:0051090;regulation of transcription factor activity;0.00915473557347465!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00918903087562467!GO:0046164;alcohol catabolic process;0.00928932076503098!GO:0004003;ATP-dependent DNA helicase activity;0.00942598134065071!GO:0032940;secretion by cell;0.00946055401305594!GO:0006096;glycolysis;0.00958548994176354!GO:0045045;secretory pathway;0.00972529152655469!GO:0006118;electron transport;0.00987188912778193!GO:0043130;ubiquitin binding;0.00993873461450809!GO:0032182;small conjugating protein binding;0.00993873461450809!GO:0001836;release of cytochrome c from mitochondria;0.00996939145940734!GO:0019843;rRNA binding;0.0100457994473597!GO:0018193;peptidyl-amino acid modification;0.0100962813457836!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0104984548581813!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0104984548581813!GO:0009126;purine nucleoside monophosphate metabolic process;0.0104984548581813!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0104984548581813!GO:0006284;base-excision repair;0.0107335847313836!GO:0006144;purine base metabolic process;0.0107335847313836!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0108968861709658!GO:0005096;GTPase activator activity;0.0109200375144028!GO:0050662;coenzyme binding;0.0109458367569229!GO:0042613;MHC class II protein complex;0.0109636981025945!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.011072030121386!GO:0046474;glycerophospholipid biosynthetic process;0.0112129814162423!GO:0030119;AP-type membrane coat adaptor complex;0.0112540623257799!GO:0006779;porphyrin biosynthetic process;0.0113259789750621!GO:0033014;tetrapyrrole biosynthetic process;0.0113259789750621!GO:0030521;androgen receptor signaling pathway;0.0114878124541177!GO:0007265;Ras protein signal transduction;0.0115061462141742!GO:0000175;3'-5'-exoribonuclease activity;0.0116760616868859!GO:0007052;mitotic spindle organization and biogenesis;0.0121548295489114!GO:0000139;Golgi membrane;0.0121561499094276!GO:0030518;steroid hormone receptor signaling pathway;0.0123272789322461!GO:0009451;RNA modification;0.0126726144032971!GO:0000287;magnesium ion binding;0.0126726144032971!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0134212374177337!GO:0005832;chaperonin-containing T-complex;0.0136568762841186!GO:0051881;regulation of mitochondrial membrane potential;0.0136830041977956!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0139073080155194!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0140270841800635!GO:0051101;regulation of DNA binding;0.0141755289776992!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0142580714019058!GO:0051087;chaperone binding;0.0142875591508879!GO:0002521;leukocyte differentiation;0.0143558646394819!GO:0046467;membrane lipid biosynthetic process;0.0143612033829573!GO:0035258;steroid hormone receptor binding;0.0144891353434269!GO:0006767;water-soluble vitamin metabolic process;0.0145449031959332!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.014785272776183!GO:0012510;trans-Golgi network transport vesicle membrane;0.014785272776183!GO:0042393;histone binding;0.0155114064632952!GO:0006740;NADPH regeneration;0.015678397851927!GO:0006098;pentose-phosphate shunt;0.015678397851927!GO:0022411;cellular component disassembly;0.0159859114122077!GO:0022415;viral reproductive process;0.0160083868717394!GO:0009893;positive regulation of metabolic process;0.0160871515807717!GO:0015631;tubulin binding;0.0160871515807717!GO:0033367;protein localization in mast cell secretory granule;0.0160871515807717!GO:0033365;protein localization in organelle;0.0160871515807717!GO:0033371;T cell secretory granule organization and biogenesis;0.0160871515807717!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0160871515807717!GO:0033375;protease localization in T cell secretory granule;0.0160871515807717!GO:0042629;mast cell granule;0.0160871515807717!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0160871515807717!GO:0033364;mast cell secretory granule organization and biogenesis;0.0160871515807717!GO:0033380;granzyme B localization in T cell secretory granule;0.0160871515807717!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0160871515807717!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0160871515807717!GO:0033368;protease localization in mast cell secretory granule;0.0160871515807717!GO:0033366;protein localization in secretory granule;0.0160871515807717!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0160871515807717!GO:0033374;protein localization in T cell secretory granule;0.0160871515807717!GO:0030695;GTPase regulator activity;0.0176892642116245!GO:0019362;pyridine nucleotide metabolic process;0.017858376131272!GO:0042770;DNA damage response, signal transduction;0.018030058515826!GO:0033157;regulation of intracellular protein transport;0.0182950562606101!GO:0042306;regulation of protein import into nucleus;0.0182950562606101!GO:0005669;transcription factor TFIID complex;0.0183832284103206!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0183889212020966!GO:0006275;regulation of DNA replication;0.018470327840772!GO:0009081;branched chain family amino acid metabolic process;0.0184761606817663!GO:0032259;methylation;0.0187481488809835!GO:0019783;small conjugating protein-specific protease activity;0.0188172684718108!GO:0046902;regulation of mitochondrial membrane permeability;0.0190069524553442!GO:0007004;telomere maintenance via telomerase;0.019139679378354!GO:0008180;signalosome;0.0193721493524835!GO:0045941;positive regulation of transcription;0.0194940419953549!GO:0045321;leukocyte activation;0.0195078843562473!GO:0031123;RNA 3'-end processing;0.0196360904639923!GO:0016790;thiolester hydrolase activity;0.0200956436548057!GO:0031625;ubiquitin protein ligase binding;0.0201276633837488!GO:0004448;isocitrate dehydrogenase activity;0.0201672052735588!GO:0051251;positive regulation of lymphocyte activation;0.0207011834413237!GO:0019318;hexose metabolic process;0.0209089983166477!GO:0030131;clathrin adaptor complex;0.0210289182631562!GO:0000228;nuclear chromosome;0.021302353520232!GO:0004843;ubiquitin-specific protease activity;0.0213274910762434!GO:0005869;dynactin complex;0.0213618518186957!GO:0000781;chromosome, telomeric region;0.0213844927942028!GO:0008022;protein C-terminus binding;0.0213939627899742!GO:0044438;microbody part;0.0215809601617698!GO:0044439;peroxisomal part;0.0215809601617698!GO:0000738;DNA catabolic process, exonucleolytic;0.0216155377694711!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0216155377694711!GO:0010257;NADH dehydrogenase complex assembly;0.0216155377694711!GO:0033108;mitochondrial respiratory chain complex assembly;0.0216155377694711!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0217198349821366!GO:0030027;lamellipodium;0.021740143898305!GO:0006783;heme biosynthetic process;0.0219154818843809!GO:0046979;TAP2 binding;0.0219154818843809!GO:0046977;TAP binding;0.0219154818843809!GO:0046978;TAP1 binding;0.0219154818843809!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0219154818843809!GO:0043596;nuclear replication fork;0.022138588780983!GO:0008629;induction of apoptosis by intracellular signals;0.0221751050686973!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0224109053671377!GO:0006672;ceramide metabolic process;0.0226517068478592!GO:0046519;sphingoid metabolic process;0.0226517068478592!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0226634179103402!GO:0005876;spindle microtubule;0.0231395794185223!GO:0006378;mRNA polyadenylation;0.0231395794185223!GO:0009116;nucleoside metabolic process;0.0231408847537419!GO:0051540;metal cluster binding;0.0232338619652201!GO:0051536;iron-sulfur cluster binding;0.0232338619652201!GO:0006519;amino acid and derivative metabolic process;0.0232338619652201!GO:0000118;histone deacetylase complex;0.0233046770654894!GO:0043621;protein self-association;0.0239918397564163!GO:0008538;proteasome activator activity;0.023997030512903!GO:0030041;actin filament polymerization;0.0241538244838215!GO:0046426;negative regulation of JAK-STAT cascade;0.0242282011658818!GO:0005083;small GTPase regulator activity;0.0245526019397497!GO:0009607;response to biotic stimulus;0.0245526019397497!GO:0016301;kinase activity;0.0245526019397497!GO:0005996;monosaccharide metabolic process;0.0246917987391484!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0249320603811008!GO:0030140;trans-Golgi network transport vesicle;0.0254625652183415!GO:0006308;DNA catabolic process;0.0255799978834556!GO:0043549;regulation of kinase activity;0.026200885507469!GO:0006984;ER-nuclear signaling pathway;0.0263814673559621!GO:0051338;regulation of transferase activity;0.0265205850396614!GO:0051539;4 iron, 4 sulfur cluster binding;0.0268440915906742!GO:0008097;5S rRNA binding;0.0268986180750887!GO:0004576;oligosaccharyl transferase activity;0.0270593046482451!GO:0032507;maintenance of cellular protein localization;0.0274634055939555!GO:0006376;mRNA splice site selection;0.0274634055939555!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0274634055939555!GO:0050851;antigen receptor-mediated signaling pathway;0.0274820262115335!GO:0019900;kinase binding;0.02753748585297!GO:0031529;ruffle organization and biogenesis;0.0278174727779556!GO:0007010;cytoskeleton organization and biogenesis;0.0282837437103653!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0284568839058565!GO:0032774;RNA biosynthetic process;0.0288735140048284!GO:0019238;cyclohydrolase activity;0.0288775560851638!GO:0008250;oligosaccharyl transferase complex;0.0295945382652755!GO:0050178;phenylpyruvate tautomerase activity;0.0302948479303427!GO:0043284;biopolymer biosynthetic process;0.0304024942849392!GO:0030097;hemopoiesis;0.0304024942849392!GO:0043414;biopolymer methylation;0.0304125159732105!GO:0044275;cellular carbohydrate catabolic process;0.0309605356132151!GO:0006351;transcription, DNA-dependent;0.0310960419764198!GO:0043281;regulation of caspase activity;0.0320861579857321!GO:0004221;ubiquitin thiolesterase activity;0.0321710983810823!GO:0031903;microbody membrane;0.0322174512108974!GO:0005778;peroxisomal membrane;0.0322174512108974!GO:0050871;positive regulation of B cell activation;0.0324645380754262!GO:0006354;RNA elongation;0.0324645380754262!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0325361101944135!GO:0006643;membrane lipid metabolic process;0.0326228728972027!GO:0031325;positive regulation of cellular metabolic process;0.0327193867272507!GO:0000910;cytokinesis;0.0330530680673558!GO:0000152;nuclear ubiquitin ligase complex;0.0336410862147955!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0343070340093414!GO:0045039;protein import into mitochondrial inner membrane;0.0343070340093414!GO:0005777;peroxisome;0.0348440752040881!GO:0042579;microbody;0.0348440752040881!GO:0008624;induction of apoptosis by extracellular signals;0.0348805247548617!GO:0005092;GDP-dissociation inhibitor activity;0.0351656514477254!GO:0045892;negative regulation of transcription, DNA-dependent;0.0357283836619043!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0357293640098363!GO:0015036;disulfide oxidoreductase activity;0.035736537266062!GO:0016407;acetyltransferase activity;0.0358671263182224!GO:0016408;C-acyltransferase activity;0.035928360031793!GO:0009303;rRNA transcription;0.0361077768055803!GO:0030098;lymphocyte differentiation;0.0362948789856511!GO:0045185;maintenance of protein localization;0.0372760318711728!GO:0042990;regulation of transcription factor import into nucleus;0.0375214161633586!GO:0042991;transcription factor import into nucleus;0.0375214161633586!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0375382555454034!GO:0005791;rough endoplasmic reticulum;0.0378987558113069!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0380367561811085!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0380367956716035!GO:0000922;spindle pole;0.0387911136869918!GO:0031371;ubiquitin conjugating enzyme complex;0.0388219523208992!GO:0016791;phosphoric monoester hydrolase activity;0.0388219523208992!GO:0050853;B cell receptor signaling pathway;0.0395300012302952!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0395300012302952!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0395300012302952!GO:0009083;branched chain family amino acid catabolic process;0.0396333063505366!GO:0030508;thiol-disulfide exchange intermediate activity;0.0398930887732287!GO:0005784;translocon complex;0.0404269084621427!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0408632307861581!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0408632307861581!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0408632307861581!GO:0042364;water-soluble vitamin biosynthetic process;0.0410382927144992!GO:0046488;phosphatidylinositol metabolic process;0.041051976663002!GO:0004540;ribonuclease activity;0.0411675216289292!GO:0031098;stress-activated protein kinase signaling pathway;0.0418644156587079!GO:0045859;regulation of protein kinase activity;0.0428055028672882!GO:0016605;PML body;0.0431167928280736!GO:0030262;apoptotic nuclear changes;0.0432374946744984!GO:0016044;membrane organization and biogenesis;0.0436124182785245!GO:0000096;sulfur amino acid metabolic process;0.0440580480095503!GO:0008537;proteasome activator complex;0.0443553075207458!GO:0035267;NuA4 histone acetyltransferase complex;0.0445309926315935!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0445955201441922!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0447049816078679!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0447049816078679!GO:0051287;NAD binding;0.0452159278751964!GO:0008320;protein transmembrane transporter activity;0.0456514716261487!GO:0051651;maintenance of cellular localization;0.04684791980234!GO:0003702;RNA polymerase II transcription factor activity;0.0474724433111569!GO:0006739;NADP metabolic process;0.047522563490664!GO:0044454;nuclear chromosome part;0.0478532576037247!GO:0009112;nucleobase metabolic process;0.0478907094747407!GO:0031647;regulation of protein stability;0.0478907094747407!GO:0007034;vacuolar transport;0.047941750877652!GO:0042169;SH2 domain binding;0.0481818024451443!GO:0051091;positive regulation of transcription factor activity;0.0481818024451443!GO:0004659;prenyltransferase activity;0.048284286915436!GO:0043624;cellular protein complex disassembly;0.0483469656807043!GO:0032984;macromolecular complex disassembly;0.0485700801258818!GO:0016788;hydrolase activity, acting on ester bonds;0.0488977507128206!GO:0006596;polyamine biosynthetic process;0.0489069504281792!GO:0007253;cytoplasmic sequestering of NF-kappaB;0.0491709606644549!GO:0006919;caspase activation;0.0495946483594064
|sample_id=10563
|sample_id=10563
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=POU2F1..3:1.84405278157;POU5F1:1.81338605971;HOXA9_MEIS1:1.69490393331;IRF1,2:1.66853966197;NFKB1_REL_RELA:1.64568209132;IRF7:1.49174859233;CDX1,2,4:1.396137302;PAX6:1.3674984499;NKX6-1,2:1.31520232922;ELF1,2,4:1.25621888659;PDX1:1.25609591506;LMO2:1.03928661283;SPI1:1.00384743864;DMAP1_NCOR{1,2}_SMARC:0.922599822436;PAX3,7:0.915171404905;NFY{A,B,C}:0.905419924473;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.869675026459;YY1:0.847676410982;MYOD1:0.818401934582;ELK1,4_GABP{A,B1}:0.734564739611;RUNX1..3:0.712873968016;POU1F1:0.693420214504;ZEB1:0.664444872595;NANOG{mouse}:0.631727153408;ESR1:0.603062432118;EVI1:0.578600285251;TOPORS:0.526356250211;AIRE:0.526031346951;CRX:0.519857470512;MYB:0.519390382182;ZBTB16:0.518927933678;NR5A1,2:0.485774006726;TP53:0.464370930394;SPIB:0.453115311295;E2F1..5:0.434737161401;FOXP3:0.421862835845;ETS1,2:0.420112056083;OCT4_SOX2{dimer}:0.418539544006;FOXA2:0.402941073046;TFAP4:0.389963367915;CUX2:0.371522911193;FOXP1:0.370921357311;IKZF2:0.367336979938;FOXN1:0.366378462013;ESRRA:0.351794164851;SNAI1..3:0.345821779849;PBX1:0.340326100733;PITX1..3:0.318631134046;RBPJ:0.312066692329;HIF1A:0.310216966981;TLX2:0.304404857522;GATA6:0.273377375363;PRDM1:0.265847128237;PRRX1,2:0.2286801522;VSX1,2:0.155817371924;HOX{A6,A7,B6,B7}:0.148961500039;ATF5_CREB3:0.121552428111;TGIF1:0.117863924052;FOX{F1,F2,J1}:0.114675507216;PAX8:0.106505455577;NRF1:0.0546340960603;RFX2..5_RFXANK_RFXAP:0.0401879840259;STAT1,3:0.0257078289343;ZNF384:0.0245734625029;ZNF143:0.00643232718189;NR6A1:0.00623990843835;GCM1,2:0.000221505089799;STAT5{A,B}:-0.000527920110485;PAX2:-0.0116144955476;DBP:-0.0220703731726;bHLH_family:-0.0340346400029;NKX2-1,4:-0.0378433791852;SOX5:-0.0419584531216;HNF4A_NR2F1,2:-0.0431598478597;ALX4:-0.0490902009985;SOX{8,9,10}:-0.0872023218044;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.091325953909;NKX3-2:-0.0969667483792;EBF1:-0.096990091787;ONECUT1,2:-0.112070343378;RORA:-0.11273903149;AHR_ARNT_ARNT2:-0.116994453072;HES1:-0.117565678879;CDC5L:-0.123738005123;MEF2{A,B,C,D}:-0.145907386845;GATA4:-0.177762236595;GFI1:-0.219720740356;HMGA1,2:-0.247120786204;GFI1B:-0.253338606795;BPTF:-0.25834237521;SMAD1..7,9:-0.263092516821;HOX{A5,B5}:-0.269695367488;ARID5B:-0.289327965498;NFE2:-0.306649999442;BREu{core}:-0.307309349011;FOXQ1:-0.341418771322;HNF1A:-0.34464292399;NFIX:-0.378893268832;SRF:-0.397836214949;STAT2,4,6:-0.431571386834;FOSL2:-0.435240767507;NKX2-3_NKX2-5:-0.443119677804;NKX2-2,8:-0.463269375597;PAX4:-0.470556604857;ATF4:-0.47531203582;CEBPA,B_DDIT3:-0.501571051517;FOS_FOS{B,L1}_JUN{B,D}:-0.515431998452;SOX17:-0.518585127136;SREBF1,2:-0.519657119611;NANOG:-0.536346952982;HOX{A4,D4}:-0.537497406618;UFEwm:-0.543753201379;MAFB:-0.55669554187;CREB1:-0.574771805684;POU3F1..4:-0.609297712871;LEF1_TCF7_TCF7L1,2:-0.617251811832;BACH2:-0.620774415419;EN1,2:-0.666190504481;HAND1,2:-0.671016873617;ZIC1..3:-0.672196951409;LHX3,4:-0.705310678723;HSF1,2:-0.710991646096;RREB1:-0.724188809771;RXR{A,B,G}:-0.727350784437;IKZF1:-0.73600496878;FOXD3:-0.739364442045;HBP1_HMGB_SSRP1_UBTF:-0.746527408333;ZNF238:-0.75161526636;TBP:-0.763624137414;TAL1_TCF{3,4,12}:-0.767560132539;NKX3-1:-0.775730249656;FOXO1,3,4:-0.79422251626;NFE2L2:-0.796916650937;HLF:-0.802668030025;T:-0.813306019036;NHLH1,2:-0.818573898174;EP300:-0.831580501083;ADNP_IRX_SIX_ZHX:-0.838606630329;KLF4:-0.847578886393;TFDP1:-0.855189552609;GLI1..3:-0.856446478595;ZFP161:-0.859562256359;MYBL2:-0.860526235717;MZF1:-0.861280707988;TEF:-0.862711946842;REST:-0.869600864787;RFX1:-0.890412549523;NR1H4:-0.911886868349;ATF2:-0.914746178673;MYFfamily:-0.922939017824;GTF2A1,2:-0.92758647809;TBX4,5:-0.933082279874;ZNF148:-0.942172500695;NFIL3:-0.954579261299;AR:-0.965244837759;HMX1:-0.985210045944;POU6F1:-1.00788946451;JUN:-1.01242899729;PPARG:-1.02419804293;SPZ1:-1.02622928228;NFATC1..3:-1.02901374912;EGR1..3:-1.06174205093;GZF1:-1.0648973933;PATZ1:-1.06691103826;ATF6:-1.07777321811;MTF1:-1.09493802335;TFCP2:-1.10749698128;ZBTB6:-1.13209998313;SOX2:-1.13227660837;GTF2I:-1.17260248214;TLX1..3_NFIC{dimer}:-1.18296307074;MED-1{core}:-1.19332684771;NFE2L1:-1.20422663855;FOXM1:-1.22009463038;MTE{core}:-1.22528359868;HIC1:-1.29387712163;FOX{D1,D2}:-1.30620070007;NR3C1:-1.30997932904;ZNF423:-1.3104457902;XCPE1{core}:-1.32959422091;RXRA_VDR{dimer}:-1.36548643447;FOX{I1,J2}:-1.3686059889;PAX5:-1.39251584296;TFAP2{A,C}:-1.4076474374;MAZ:-1.4192400812;TEAD1:-1.42017081085;SP1:-1.44802754231;PAX1,9:-1.46267993258;XBP1:-1.46676535656;FOXL1:-1.4793682023;TFAP2B:-1.53228810734;ALX1:-1.9917025735
|top_motifs=POU2F1..3:1.84405278157;POU5F1:1.81338605971;HOXA9_MEIS1:1.69490393331;IRF1,2:1.66853966197;NFKB1_REL_RELA:1.64568209132;IRF7:1.49174859233;CDX1,2,4:1.396137302;PAX6:1.3674984499;NKX6-1,2:1.31520232922;ELF1,2,4:1.25621888659;PDX1:1.25609591506;LMO2:1.03928661283;SPI1:1.00384743864;DMAP1_NCOR{1,2}_SMARC:0.922599822436;PAX3,7:0.915171404905;NFY{A,B,C}:0.905419924473;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.869675026459;YY1:0.847676410982;MYOD1:0.818401934582;ELK1,4_GABP{A,B1}:0.734564739611;RUNX1..3:0.712873968016;POU1F1:0.693420214504;ZEB1:0.664444872595;NANOG{mouse}:0.631727153408;ESR1:0.603062432118;EVI1:0.578600285251;TOPORS:0.526356250211;AIRE:0.526031346951;CRX:0.519857470512;MYB:0.519390382182;ZBTB16:0.518927933678;NR5A1,2:0.485774006726;TP53:0.464370930394;SPIB:0.453115311295;E2F1..5:0.434737161401;FOXP3:0.421862835845;ETS1,2:0.420112056083;OCT4_SOX2{dimer}:0.418539544006;FOXA2:0.402941073046;TFAP4:0.389963367915;CUX2:0.371522911193;FOXP1:0.370921357311;IKZF2:0.367336979938;FOXN1:0.366378462013;ESRRA:0.351794164851;SNAI1..3:0.345821779849;PBX1:0.340326100733;PITX1..3:0.318631134046;RBPJ:0.312066692329;HIF1A:0.310216966981;TLX2:0.304404857522;GATA6:0.273377375363;PRDM1:0.265847128237;PRRX1,2:0.2286801522;VSX1,2:0.155817371924;HOX{A6,A7,B6,B7}:0.148961500039;ATF5_CREB3:0.121552428111;TGIF1:0.117863924052;FOX{F1,F2,J1}:0.114675507216;PAX8:0.106505455577;NRF1:0.0546340960603;RFX2..5_RFXANK_RFXAP:0.0401879840259;STAT1,3:0.0257078289343;ZNF384:0.0245734625029;ZNF143:0.00643232718189;NR6A1:0.00623990843835;GCM1,2:0.000221505089799;STAT5{A,B}:-0.000527920110485;PAX2:-0.0116144955476;DBP:-0.0220703731726;bHLH_family:-0.0340346400029;NKX2-1,4:-0.0378433791852;SOX5:-0.0419584531216;HNF4A_NR2F1,2:-0.0431598478597;ALX4:-0.0490902009985;SOX{8,9,10}:-0.0872023218044;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.091325953909;NKX3-2:-0.0969667483792;EBF1:-0.096990091787;ONECUT1,2:-0.112070343378;RORA:-0.11273903149;AHR_ARNT_ARNT2:-0.116994453072;HES1:-0.117565678879;CDC5L:-0.123738005123;MEF2{A,B,C,D}:-0.145907386845;GATA4:-0.177762236595;GFI1:-0.219720740356;HMGA1,2:-0.247120786204;GFI1B:-0.253338606795;BPTF:-0.25834237521;SMAD1..7,9:-0.263092516821;HOX{A5,B5}:-0.269695367488;ARID5B:-0.289327965498;NFE2:-0.306649999442;BREu{core}:-0.307309349011;FOXQ1:-0.341418771322;HNF1A:-0.34464292399;NFIX:-0.378893268832;SRF:-0.397836214949;STAT2,4,6:-0.431571386834;FOSL2:-0.435240767507;NKX2-3_NKX2-5:-0.443119677804;NKX2-2,8:-0.463269375597;PAX4:-0.470556604857;ATF4:-0.47531203582;CEBPA,B_DDIT3:-0.501571051517;FOS_FOS{B,L1}_JUN{B,D}:-0.515431998452;SOX17:-0.518585127136;SREBF1,2:-0.519657119611;NANOG:-0.536346952982;HOX{A4,D4}:-0.537497406618;UFEwm:-0.543753201379;MAFB:-0.55669554187;CREB1:-0.574771805684;POU3F1..4:-0.609297712871;LEF1_TCF7_TCF7L1,2:-0.617251811832;BACH2:-0.620774415419;EN1,2:-0.666190504481;HAND1,2:-0.671016873617;ZIC1..3:-0.672196951409;LHX3,4:-0.705310678723;HSF1,2:-0.710991646096;RREB1:-0.724188809771;RXR{A,B,G}:-0.727350784437;IKZF1:-0.73600496878;FOXD3:-0.739364442045;HBP1_HMGB_SSRP1_UBTF:-0.746527408333;ZNF238:-0.75161526636;TBP:-0.763624137414;TAL1_TCF{3,4,12}:-0.767560132539;NKX3-1:-0.775730249656;FOXO1,3,4:-0.79422251626;NFE2L2:-0.796916650937;HLF:-0.802668030025;T:-0.813306019036;NHLH1,2:-0.818573898174;EP300:-0.831580501083;ADNP_IRX_SIX_ZHX:-0.838606630329;KLF4:-0.847578886393;TFDP1:-0.855189552609;GLI1..3:-0.856446478595;ZFP161:-0.859562256359;MYBL2:-0.860526235717;MZF1:-0.861280707988;TEF:-0.862711946842;REST:-0.869600864787;RFX1:-0.890412549523;NR1H4:-0.911886868349;ATF2:-0.914746178673;MYFfamily:-0.922939017824;GTF2A1,2:-0.92758647809;TBX4,5:-0.933082279874;ZNF148:-0.942172500695;NFIL3:-0.954579261299;AR:-0.965244837759;HMX1:-0.985210045944;POU6F1:-1.00788946451;JUN:-1.01242899729;PPARG:-1.02419804293;SPZ1:-1.02622928228;NFATC1..3:-1.02901374912;EGR1..3:-1.06174205093;GZF1:-1.0648973933;PATZ1:-1.06691103826;ATF6:-1.07777321811;MTF1:-1.09493802335;TFCP2:-1.10749698128;ZBTB6:-1.13209998313;SOX2:-1.13227660837;GTF2I:-1.17260248214;TLX1..3_NFIC{dimer}:-1.18296307074;MED-1{core}:-1.19332684771;NFE2L1:-1.20422663855;FOXM1:-1.22009463038;MTE{core}:-1.22528359868;HIC1:-1.29387712163;FOX{D1,D2}:-1.30620070007;NR3C1:-1.30997932904;ZNF423:-1.3104457902;XCPE1{core}:-1.32959422091;RXRA_VDR{dimer}:-1.36548643447;FOX{I1,J2}:-1.3686059889;PAX5:-1.39251584296;TFAP2{A,C}:-1.4076474374;MAZ:-1.4192400812;TEAD1:-1.42017081085;SP1:-1.44802754231;PAX1,9:-1.46267993258;XBP1:-1.46676535656;FOXL1:-1.4793682023;TFAP2B:-1.53228810734;ALX1:-1.9917025735
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10563-108A5;search_select_hide=table117:FF:10563-108A5
}}
}}

Latest revision as of 14:29, 3 June 2020

Name:xeroderma pigentosum b cell line:XPL 17
Species:Human (Homo sapiens)
Library ID:CNhs11813
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexunknown
ageNA
cell typeb cell
cell lineXPL 17
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005944
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11813 CAGE DRX008032 DRR008904
Accession ID Hg19

Library idBAMCTSS
CNhs11813 DRZ000329 DRZ001714
Accession ID Hg38

Library idBAMCTSS
CNhs11813 DRZ011679 DRZ013064
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.327
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.225
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0172
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.171
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.511
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0913
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.085
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.466
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.171
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0545
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.121
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.189
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0529
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.121
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0.121
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.121
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.376
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11813

Jaspar motifP-value
MA0002.25.9492e-4
MA0003.10.578
MA0004.10.122
MA0006.10.634
MA0007.10.492
MA0009.10.603
MA0014.10.999
MA0017.10.0859
MA0018.20.0175
MA0019.10.361
MA0024.10.235
MA0025.10.061
MA0027.10.496
MA0028.10.00727
MA0029.10.551
MA0030.10.0377
MA0031.10.0299
MA0035.20.859
MA0038.10.918
MA0039.20.89
MA0040.10.199
MA0041.10.141
MA0042.10.373
MA0043.10.00452
MA0046.10.167
MA0047.20.307
MA0048.10.851
MA0050.11.53921e-21
MA0051.16.1582e-16
MA0052.10.75
MA0055.10.115
MA0057.10.987
MA0058.10.118
MA0059.10.00987
MA0060.10.07
MA0061.15.62198e-9
MA0062.21.24885e-6
MA0065.20.0109
MA0066.10.242
MA0067.10.672
MA0068.10.0878
MA0069.10.423
MA0070.10.302
MA0071.10.695
MA0072.10.844
MA0073.10.451
MA0074.10.716
MA0076.10.00329
MA0077.10.336
MA0078.10.25
MA0079.20.426
MA0080.28.88022e-8
MA0081.10.0387
MA0083.10.324
MA0084.10.291
MA0087.10.162
MA0088.10.0309
MA0090.12.78236e-5
MA0091.10.962
MA0092.10.921
MA0093.10.154
MA0099.20.0651
MA0100.10.684
MA0101.15.18614e-10
MA0102.20.116
MA0103.10.00793
MA0104.20.0233
MA0105.17.74521e-12
MA0106.10.0225
MA0107.12.64165e-11
MA0108.26.19976e-6
MA0111.10.433
MA0112.20.0215
MA0113.10.973
MA0114.10.0353
MA0115.10.717
MA0116.19.85995e-5
MA0117.10.645
MA0119.10.504
MA0122.10.815
MA0124.10.424
MA0125.10.487
MA0131.10.655
MA0135.10.277
MA0136.14.44063e-9
MA0137.20.744
MA0138.20.488
MA0139.10.222
MA0140.10.805
MA0141.10.064
MA0142.10.186
MA0143.10.755
MA0144.10.671
MA0145.10.841
MA0146.10.174
MA0147.10.0118
MA0148.10.141
MA0149.10.271
MA0150.10.56
MA0152.10.111
MA0153.10.00143
MA0154.11.82544e-4
MA0155.10.919
MA0156.12.45376e-6
MA0157.10.0555
MA0159.10.0845
MA0160.10.0717
MA0162.10.412
MA0163.18.57005e-14
MA0164.10.958
MA0258.10.0209
MA0259.10.18



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11813

Novel motifP-value
10.0172
100.0348
1000.547
1010.21
1020.45
1030.276
1040.968
1050.945
1060.152
1070.435
1080.742
1090.0159
110.0583
1100.121
1110.00596
1120.0722
1130.465
1140.131
1150.431
1160.321
1170.0209
1180.0771
1190.0387
120.892
1200.446
1210.47
1220.284
1230.00382
1240.226
1250.0268
1260.119
1270.182
1280.437
1290.415
130.209
1300.913
1310.995
1320.957
1330.627
1340.932
1350.901
1360.553
1370.284
1380.555
1390.0624
140.587
1400.197
1410.192
1420.845
1430.0502
1440.873
1450.335
1460.586
1470.247
1480.105
1490.743
150.0858
1500.754
1510.876
1520.986
1530.789
1540.762
1550.105
1560.695
1570.527
1580.395
1590.338
160.537
1600.117
1610.0175
1620.967
1630.649
1640.16
1650.851
1660.453
1670.305
1680.586
1690.0887
170.391
180.338
190.782
20.945
200.554
210.13
220.702
230.927
240.165
250.208
260.0611
270.443
280.502
290.0147
30.0557
300.461
310.67
320.868
330.364
340.837
350.0915
360.0164
370.165
380.124
390.727
40.457
400.141
410.635
420.0638
430.199
440.0132
450.689
460.116
470.0232
480.0701
490.133
50.779
500.833
510.603
520.993
530.341
540.909
550.733
560.6
570.209
580.0702
590.13
60.748
600.386
610.0728
620.0776
630.322
640.146
650.253
660.704
670.353
680.258
690.924
70.195
700.172
710.0372
720.228
730.429
740.852
750.0229
760.438
770.576
780.186
790.87
80.139
800.541
810.241
820.352
830.927
840.174
850.664
860.215
870.112
880.625
890.414
90.968
900.0479
910.784
920.289
930.907
940.177
950.0364
960.433
970.223
980.168
990.703



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11813


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
630 (genetic disease)
0050177 (monogenic disease)
0050427 (xeroderma pigmentosum)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101522 (B-lymphocyte cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

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