FF:11392-118C6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005736 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005736 | ||
|accession_numbers=CAGE;DRX008117;DRR008989;DRZ000414;DRZ001799;DRZ011764;DRZ013149 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037104;DRR041470;DRZ007112 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0000956,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000128,CL:0000126,CL:0000125,CL:0000255,CL:0000127,CL:0002605 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000194 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebral%2520cortex%252c%2520donor3.CNhs12005.11392-118C6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebral%2520cortex%252c%2520donor3.CNhs12005.11392-118C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebral%2520cortex%252c%2520donor3.CNhs12005.11392-118C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebral%2520cortex%252c%2520donor3.CNhs12005.11392-118C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebral%2520cortex%252c%2520donor3.CNhs12005.11392-118C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11392-118C6 | |id=FF:11392-118C6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000194 | ||
|is_obsolete= | |||
|library_id=CNhs12005 | |||
|library_id_phase_based=2:CNhs12005 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11392 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10007.GTGAAA.11392 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11392 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10007.GTGAAA.11392 | |||
|name=Astrocyte - cerebral cortex, donor3 | |name=Astrocyte - cerebral cortex, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12005,LSID837,release011,COMPLETED | |profile_hcage=CNhs12005,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10007,,, | |profile_srnaseq=SRhi10007,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=SC1805 | |rna_catalog_number=SC1805 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118C6 | |rna_tube_id=118C6 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10007.GTGAAA | |||
|sample_age=fetal | |sample_age=fetal | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.35102844785834e-272!GO:0043226;organelle;2.1739219596263e-221!GO:0043229;intracellular organelle;4.78162983033531e-221!GO:0043231;intracellular membrane-bound organelle;2.53156884207199e-211!GO:0043227;membrane-bound organelle;3.45962234854292e-211!GO:0005737;cytoplasm;2.28933413169026e-187!GO:0044422;organelle part;6.24456034903633e-157!GO:0044446;intracellular organelle part;2.16094074101074e-155!GO:0044444;cytoplasmic part;1.65590574753624e-116!GO:0032991;macromolecular complex;2.98399372825933e-109!GO:0005634;nucleus;5.94934803687011e-101!GO:0044238;primary metabolic process;2.16236726326939e-89!GO:0044237;cellular metabolic process;1.23686396962772e-88!GO:0005515;protein binding;1.05903844263115e-87!GO:0030529;ribonucleoprotein complex;1.31305538056191e-85!GO:0043170;macromolecule metabolic process;2.764821290301e-84!GO:0044428;nuclear part;4.06883801518645e-77!GO:0043233;organelle lumen;2.07685888622087e-70!GO:0031974;membrane-enclosed lumen;2.07685888622087e-70!GO:0003723;RNA binding;3.56823035115163e-70!GO:0016043;cellular component organization and biogenesis;9.78783677700264e-68!GO:0005739;mitochondrion;5.26536711525104e-60!GO:0043234;protein complex;1.39264094180971e-57!GO:0043283;biopolymer metabolic process;4.40270169277456e-54!GO:0043228;non-membrane-bound organelle;4.30048255294519e-50!GO:0043232;intracellular non-membrane-bound organelle;4.30048255294519e-50!GO:0005840;ribosome;5.68054052804096e-50!GO:0006996;organelle organization and biogenesis;5.77179920175112e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.32671466921482e-47!GO:0031090;organelle membrane;2.38385472073807e-46!GO:0006396;RNA processing;3.43712389074632e-46!GO:0006412;translation;2.18143660574572e-44!GO:0003735;structural constituent of ribosome;1.00721148423981e-43!GO:0010467;gene expression;1.41959678308281e-43!GO:0031981;nuclear lumen;4.84740292705222e-43!GO:0019538;protein metabolic process;1.38317054971478e-42!GO:0033036;macromolecule localization;2.05816768594802e-42!GO:0031967;organelle envelope;3.2065715721491e-42!GO:0044429;mitochondrial part;3.59728199800083e-42!GO:0006259;DNA metabolic process;4.82445096087973e-42!GO:0031975;envelope;5.83033046372631e-42!GO:0015031;protein transport;7.89506470015983e-42!GO:0016071;mRNA metabolic process;2.54985866087781e-39!GO:0046907;intracellular transport;1.22192737470005e-38!GO:0008104;protein localization;1.4732959462148e-38!GO:0045184;establishment of protein localization;6.18347765501189e-38!GO:0007049;cell cycle;1.51131514206076e-37!GO:0044260;cellular macromolecule metabolic process;1.84321409756817e-37!GO:0044267;cellular protein metabolic process;2.90679627682008e-37!GO:0033279;ribosomal subunit;8.27378069558414e-37!GO:0008380;RNA splicing;2.73132578099891e-36!GO:0065003;macromolecular complex assembly;7.81283986972229e-36!GO:0009058;biosynthetic process;1.09866628647409e-35!GO:0044249;cellular biosynthetic process;4.50129227285426e-34!GO:0006397;mRNA processing;1.04684586588107e-33!GO:0009059;macromolecule biosynthetic process;2.29310421542135e-33!GO:0022607;cellular component assembly;2.2265661436544e-32!GO:0005829;cytosol;2.21882355105476e-31!GO:0003676;nucleic acid binding;4.23086701173528e-30!GO:0000278;mitotic cell cycle;8.1974303608784e-30!GO:0006886;intracellular protein transport;2.12798353015949e-29!GO:0022402;cell cycle process;7.37460561292288e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.73337318503262e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.07417794975115e-27!GO:0005740;mitochondrial envelope;1.2596441253544e-27!GO:0019866;organelle inner membrane;2.07304719615744e-27!GO:0005654;nucleoplasm;2.49767238298328e-27!GO:0005694;chromosome;6.216241778072e-27!GO:0000166;nucleotide binding;1.39263496645028e-26!GO:0031966;mitochondrial membrane;3.95266237652285e-26!GO:0005681;spliceosome;1.97206289310073e-25!GO:0044427;chromosomal part;2.99281716205533e-25!GO:0005743;mitochondrial inner membrane;4.62780634212931e-25!GO:0051649;establishment of cellular localization;8.27965535638785e-25!GO:0022403;cell cycle phase;8.43448758709067e-25!GO:0051641;cellular localization;1.55662639709791e-24!GO:0000087;M phase of mitotic cell cycle;3.57415959565989e-24!GO:0007067;mitosis;7.58502396482349e-24!GO:0051301;cell division;3.24113930637275e-23!GO:0044451;nucleoplasm part;4.94677928891221e-22!GO:0006974;response to DNA damage stimulus;8.49844622278778e-22!GO:0051276;chromosome organization and biogenesis;1.91676127319808e-21!GO:0044445;cytosolic part;3.72311565539518e-21!GO:0016462;pyrophosphatase activity;4.37826566253508e-21!GO:0016070;RNA metabolic process;6.05359432972269e-21!GO:0006119;oxidative phosphorylation;6.11791740916276e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.19093268747537e-21!GO:0000279;M phase;6.67122745780493e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;1.0007409296657e-20!GO:0017111;nucleoside-triphosphatase activity;1.32351266722799e-20!GO:0012505;endomembrane system;1.64844170417145e-19!GO:0044455;mitochondrial membrane part;2.97886651872799e-19!GO:0015934;large ribosomal subunit;5.37074693167819e-19!GO:0006281;DNA repair;5.85254403097368e-19!GO:0015935;small ribosomal subunit;7.43123822171634e-19!GO:0006260;DNA replication;1.49888230292287e-18!GO:0032553;ribonucleotide binding;2.37636422065371e-18!GO:0032555;purine ribonucleotide binding;2.37636422065371e-18!GO:0006457;protein folding;4.91474976243878e-18!GO:0031980;mitochondrial lumen;6.87930878335739e-18!GO:0005759;mitochondrial matrix;6.87930878335739e-18!GO:0006512;ubiquitin cycle;9.7668693766557e-18!GO:0017076;purine nucleotide binding;1.36410409300716e-17!GO:0016874;ligase activity;1.81340767527496e-17!GO:0022618;protein-RNA complex assembly;1.98514159936522e-17!GO:0005746;mitochondrial respiratory chain;1.69879958939571e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;2.47524426098923e-16!GO:0005524;ATP binding;2.51122948479642e-16!GO:0048770;pigment granule;3.02136965176959e-16!GO:0042470;melanosome;3.02136965176959e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.51012623518689e-16!GO:0006605;protein targeting;7.70577709549798e-16!GO:0032559;adenyl ribonucleotide binding;8.35346418328792e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.23425818318513e-15!GO:0006323;DNA packaging;1.37456949281607e-15!GO:0019941;modification-dependent protein catabolic process;1.82113580080652e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.82113580080652e-15!GO:0005635;nuclear envelope;1.96597294794066e-15!GO:0015630;microtubule cytoskeleton;1.972835209807e-15!GO:0031965;nuclear membrane;2.0674057068676e-15!GO:0044265;cellular macromolecule catabolic process;2.11173083970654e-15!GO:0005730;nucleolus;2.42261174048165e-15!GO:0006511;ubiquitin-dependent protein catabolic process;2.64314521842683e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.15087255846499e-15!GO:0005794;Golgi apparatus;3.50103545639358e-15!GO:0044257;cellular protein catabolic process;4.11925135152383e-15!GO:0050136;NADH dehydrogenase (quinone) activity;4.13279893805611e-15!GO:0003954;NADH dehydrogenase activity;4.13279893805611e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.13279893805611e-15!GO:0005783;endoplasmic reticulum;5.5078549088694e-15!GO:0009719;response to endogenous stimulus;5.96363746768532e-15!GO:0008134;transcription factor binding;6.16483671902741e-15!GO:0030554;adenyl nucleotide binding;6.35208304299938e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.2785960714039e-14!GO:0044453;nuclear membrane part;1.7534426172344e-14!GO:0008135;translation factor activity, nucleic acid binding;2.17792125456549e-14!GO:0043285;biopolymer catabolic process;8.17356147231807e-14!GO:0000785;chromatin;1.47132698181803e-13!GO:0005761;mitochondrial ribosome;1.62750151521347e-13!GO:0000313;organellar ribosome;1.62750151521347e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.21357489385131e-13!GO:0043412;biopolymer modification;2.64035993820765e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.79538984786747e-13!GO:0000375;RNA splicing, via transesterification reactions;2.79538984786747e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.79538984786747e-13!GO:0030964;NADH dehydrogenase complex (quinone);4.14182137786769e-13!GO:0045271;respiratory chain complex I;4.14182137786769e-13!GO:0005747;mitochondrial respiratory chain complex I;4.14182137786769e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.4077950048367e-13!GO:0042773;ATP synthesis coupled electron transport;4.4077950048367e-13!GO:0044432;endoplasmic reticulum part;4.89456084056277e-13!GO:0030163;protein catabolic process;5.45718380802275e-13!GO:0009057;macromolecule catabolic process;5.48893748813365e-13!GO:0051726;regulation of cell cycle;5.58807412748326e-13!GO:0000074;regulation of progression through cell cycle;5.88305855416564e-13!GO:0051082;unfolded protein binding;7.23162170715999e-13!GO:0048193;Golgi vesicle transport;7.56214731951123e-13!GO:0065004;protein-DNA complex assembly;1.10039514328131e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.26107997004984e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.59539159167641e-12!GO:0051186;cofactor metabolic process;1.97648510068527e-12!GO:0006333;chromatin assembly or disassembly;2.03718483481022e-12!GO:0005643;nuclear pore;2.21772737064783e-12!GO:0006464;protein modification process;4.54320114137951e-12!GO:0044248;cellular catabolic process;4.61765485523477e-12!GO:0006913;nucleocytoplasmic transport;5.40162772186984e-12!GO:0051169;nuclear transport;1.61741891846188e-11!GO:0050794;regulation of cellular process;1.73338235445322e-11!GO:0003743;translation initiation factor activity;2.07865991853904e-11!GO:0006413;translational initiation;4.0457162970023e-11!GO:0042254;ribosome biogenesis and assembly;4.14918829053605e-11!GO:0016604;nuclear body;5.58923829447663e-11!GO:0043687;post-translational protein modification;7.08435593660528e-11!GO:0006334;nucleosome assembly;8.2867964698051e-11!GO:0007010;cytoskeleton organization and biogenesis;9.15398701456206e-11!GO:0006403;RNA localization;9.36770205898824e-11!GO:0042623;ATPase activity, coupled;1.04345791689895e-10!GO:0016887;ATPase activity;1.09174158275862e-10!GO:0000775;chromosome, pericentric region;1.28503843165212e-10!GO:0006732;coenzyme metabolic process;1.60354133857429e-10!GO:0050657;nucleic acid transport;2.00435300232989e-10!GO:0051236;establishment of RNA localization;2.00435300232989e-10!GO:0050658;RNA transport;2.00435300232989e-10!GO:0065002;intracellular protein transport across a membrane;2.40370440713326e-10!GO:0048523;negative regulation of cellular process;2.40901895665918e-10!GO:0016192;vesicle-mediated transport;2.66348104888291e-10!GO:0009055;electron carrier activity;3.41514757816507e-10!GO:0005819;spindle;3.64751600744801e-10!GO:0004386;helicase activity;5.11742857901476e-10!GO:0031497;chromatin assembly;6.00637885795982e-10!GO:0006446;regulation of translational initiation;6.24823077368997e-10!GO:0008639;small protein conjugating enzyme activity;6.26743623290672e-10!GO:0006461;protein complex assembly;9.54072369374425e-10!GO:0046930;pore complex;1.01560242267621e-09!GO:0004842;ubiquitin-protein ligase activity;1.30340534669711e-09!GO:0008565;protein transporter activity;1.70187017619475e-09!GO:0006366;transcription from RNA polymerase II promoter;1.7918513474426e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.56769876334994e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.89161310326982e-09!GO:0009259;ribonucleotide metabolic process;4.41668031610966e-09!GO:0019787;small conjugating protein ligase activity;4.60423896544267e-09!GO:0005789;endoplasmic reticulum membrane;5.06202246398174e-09!GO:0017038;protein import;5.2894030155519e-09!GO:0016607;nuclear speck;5.31800592362434e-09!GO:0005793;ER-Golgi intermediate compartment;5.89635631223216e-09!GO:0006163;purine nucleotide metabolic process;7.33079785002042e-09!GO:0003712;transcription cofactor activity;7.95939721589261e-09!GO:0048519;negative regulation of biological process;8.72793136869278e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.18520916006075e-08!GO:0051028;mRNA transport;1.23289770422128e-08!GO:0050789;regulation of biological process;1.35510851668354e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.64302188358282e-08!GO:0006399;tRNA metabolic process;1.78336558089027e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.85496501746918e-08!GO:0009060;aerobic respiration;2.40824020395111e-08!GO:0043566;structure-specific DNA binding;2.45762415843881e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.5980890133893e-08!GO:0003697;single-stranded DNA binding;2.99292895608072e-08!GO:0006164;purine nucleotide biosynthetic process;3.10594237061919e-08!GO:0006261;DNA-dependent DNA replication;3.70131127816519e-08!GO:0009150;purine ribonucleotide metabolic process;4.86795200926897e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.71920177416883e-08!GO:0004812;aminoacyl-tRNA ligase activity;5.71920177416883e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.71920177416883e-08!GO:0051325;interphase;5.79706193388204e-08!GO:0051329;interphase of mitotic cell cycle;5.81287766005561e-08!GO:0009260;ribonucleotide biosynthetic process;5.84434813776673e-08!GO:0003924;GTPase activity;6.02785827740681e-08!GO:0045333;cellular respiration;6.32935031413946e-08!GO:0016881;acid-amino acid ligase activity;7.3455770539419e-08!GO:0008026;ATP-dependent helicase activity;7.69303253686054e-08!GO:0012501;programmed cell death;8.2259143683214e-08!GO:0005874;microtubule;1.01571844684634e-07!GO:0043038;amino acid activation;1.20932295854967e-07!GO:0006418;tRNA aminoacylation for protein translation;1.20932295854967e-07!GO:0043039;tRNA aminoacylation;1.20932295854967e-07!GO:0006915;apoptosis;1.35475128390437e-07!GO:0006364;rRNA processing;1.49676175427375e-07!GO:0031252;leading edge;1.57700370802861e-07!GO:0009141;nucleoside triphosphate metabolic process;1.68867318929658e-07!GO:0007051;spindle organization and biogenesis;1.82600711489654e-07!GO:0008092;cytoskeletal protein binding;1.82945129681615e-07!GO:0016568;chromatin modification;1.88566632501058e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.02421360067575e-07!GO:0016740;transferase activity;2.1140682263169e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.15138239331289e-07!GO:0015986;ATP synthesis coupled proton transport;2.53297731420619e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.53297731420619e-07!GO:0031324;negative regulation of cellular metabolic process;3.10496628511542e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.10593632393042e-07!GO:0009142;nucleoside triphosphate biosynthetic process;3.45399179027873e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.45399179027873e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.93630483732177e-07!GO:0005813;centrosome;3.93630483732177e-07!GO:0016072;rRNA metabolic process;4.3555596743056e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.39628667958252e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.39628667958252e-07!GO:0005667;transcription factor complex;5.21124609425161e-07!GO:0000075;cell cycle checkpoint;5.46868422805237e-07!GO:0007005;mitochondrion organization and biogenesis;5.56447432097608e-07!GO:0048475;coated membrane;6.05855431043585e-07!GO:0030117;membrane coat;6.05855431043585e-07!GO:0019829;cation-transporting ATPase activity;6.06575869255926e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.19799457719872e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.19799457719872e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.19799457719872e-07!GO:0006099;tricarboxylic acid cycle;8.01327978629008e-07!GO:0046356;acetyl-CoA catabolic process;8.01327978629008e-07!GO:0005815;microtubule organizing center;8.47509192913798e-07!GO:0044431;Golgi apparatus part;8.60491192750566e-07!GO:0009056;catabolic process;8.60491192750566e-07!GO:0008219;cell death;1.02523376523691e-06!GO:0016265;death;1.02523376523691e-06!GO:0043623;cellular protein complex assembly;1.02897638446987e-06!GO:0032446;protein modification by small protein conjugation;1.15509565961582e-06!GO:0030120;vesicle coat;1.31090940614734e-06!GO:0030662;coated vesicle membrane;1.31090940614734e-06!GO:0009892;negative regulation of metabolic process;1.32387625261267e-06!GO:0007017;microtubule-based process;1.61431802296086e-06!GO:0051188;cofactor biosynthetic process;1.63004020923115e-06!GO:0051170;nuclear import;1.71258823737633e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.7680610999039e-06!GO:0016567;protein ubiquitination;1.90369755711159e-06!GO:0006606;protein import into nucleus;2.27824813579954e-06!GO:0006793;phosphorus metabolic process;2.34775229899553e-06!GO:0006796;phosphate metabolic process;2.34775229899553e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.36960403430349e-06!GO:0046034;ATP metabolic process;2.42030704056648e-06!GO:0045259;proton-transporting ATP synthase complex;2.54155885686047e-06!GO:0006084;acetyl-CoA metabolic process;2.54165127834683e-06!GO:0008361;regulation of cell size;2.61221116662091e-06!GO:0016049;cell growth;2.64622138069256e-06!GO:0008094;DNA-dependent ATPase activity;3.14726420208767e-06!GO:0045786;negative regulation of progression through cell cycle;3.21247354354257e-06!GO:0000245;spliceosome assembly;3.23816851132056e-06!GO:0006754;ATP biosynthetic process;3.29552804038254e-06!GO:0006753;nucleoside phosphate metabolic process;3.29552804038254e-06!GO:0016310;phosphorylation;3.35352950171044e-06!GO:0005657;replication fork;3.38188062053175e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.46905152378442e-06!GO:0016779;nucleotidyltransferase activity;3.57174529606516e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.57174529606516e-06!GO:0006752;group transfer coenzyme metabolic process;3.89819507195508e-06!GO:0007059;chromosome segregation;5.5286989757719e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.77361830386532e-06!GO:0009109;coenzyme catabolic process;5.94025908505123e-06!GO:0019222;regulation of metabolic process;5.95932425071944e-06!GO:0000776;kinetochore;6.27192896537066e-06!GO:0005788;endoplasmic reticulum lumen;6.36326131568841e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.38313650427188e-06!GO:0051246;regulation of protein metabolic process;6.82991784582935e-06!GO:0000151;ubiquitin ligase complex;7.06964069609505e-06!GO:0009117;nucleotide metabolic process;7.5208536982523e-06!GO:0005768;endosome;8.52239432865474e-06!GO:0006613;cotranslational protein targeting to membrane;9.33322189961322e-06!GO:0000786;nucleosome;9.83990183262082e-06!GO:0051187;cofactor catabolic process;1.41729791585133e-05!GO:0005762;mitochondrial large ribosomal subunit;1.41729791585133e-05!GO:0000315;organellar large ribosomal subunit;1.41729791585133e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.65484812665973e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;1.82644226572112e-05!GO:0030029;actin filament-based process;2.11472963737893e-05!GO:0016126;sterol biosynthetic process;2.12982473609881e-05!GO:0043069;negative regulation of programmed cell death;2.12982473609881e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.2536567814723e-05!GO:0001558;regulation of cell growth;2.2536567814723e-05!GO:0016564;transcription repressor activity;2.4347158358765e-05!GO:0016481;negative regulation of transcription;2.43921035945484e-05!GO:0009108;coenzyme biosynthetic process;2.45979878307794e-05!GO:0031988;membrane-bound vesicle;2.82876984653375e-05!GO:0006916;anti-apoptosis;3.10077451221724e-05!GO:0004298;threonine endopeptidase activity;3.2121895266899e-05!GO:0043066;negative regulation of apoptosis;3.49964834054444e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.50676632909381e-05!GO:0016023;cytoplasmic membrane-bound vesicle;3.62304035698597e-05!GO:0051168;nuclear export;3.65398054978584e-05!GO:0003714;transcription corepressor activity;3.69845151743932e-05!GO:0005798;Golgi-associated vesicle;4.89366164817702e-05!GO:0000139;Golgi membrane;4.93717742000701e-05!GO:0016859;cis-trans isomerase activity;5.14998185272286e-05!GO:0005525;GTP binding;5.69884569582711e-05!GO:0007088;regulation of mitosis;5.69884569582711e-05!GO:0003899;DNA-directed RNA polymerase activity;6.03364848435379e-05!GO:0015631;tubulin binding;6.32411734686172e-05!GO:0007093;mitotic cell cycle checkpoint;6.38425952149352e-05!GO:0016853;isomerase activity;6.92231800262645e-05!GO:0048471;perinuclear region of cytoplasm;7.96777419520365e-05!GO:0051427;hormone receptor binding;8.08904464724443e-05!GO:0031982;vesicle;8.21927279274779e-05!GO:0003724;RNA helicase activity;8.9839089533299e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.05659385513015e-05!GO:0003682;chromatin binding;9.13536867011588e-05!GO:0008654;phospholipid biosynthetic process;9.29806488644956e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;9.70208256626926e-05!GO:0043067;regulation of programmed cell death;0.000104748881622983!GO:0006695;cholesterol biosynthetic process;0.000105157264612909!GO:0042981;regulation of apoptosis;0.000106899973932974!GO:0031410;cytoplasmic vesicle;0.000115285185285651!GO:0030867;rough endoplasmic reticulum membrane;0.000128399838238718!GO:0019899;enzyme binding;0.000159031070858908!GO:0006302;double-strand break repair;0.000160407689516776!GO:0035257;nuclear hormone receptor binding;0.000172196675892688!GO:0019843;rRNA binding;0.000173348599459755!GO:0003690;double-stranded DNA binding;0.000187025049743613!GO:0015980;energy derivation by oxidation of organic compounds;0.00018745876383224!GO:0005905;coated pit;0.000195354655237071!GO:0016363;nuclear matrix;0.000196762873279098!GO:0006310;DNA recombination;0.000213650031250191!GO:0000902;cell morphogenesis;0.000229878175623476!GO:0032989;cellular structure morphogenesis;0.000229878175623476!GO:0000059;protein import into nucleus, docking;0.000231566019541534!GO:0045454;cell redox homeostasis;0.000252377898697325!GO:0006612;protein targeting to membrane;0.000266868150712501!GO:0043021;ribonucleoprotein binding;0.000311135287771964!GO:0003684;damaged DNA binding;0.000320665122055645!GO:0005770;late endosome;0.000353949857440006!GO:0044440;endosomal part;0.000353949857440006!GO:0010008;endosome membrane;0.000353949857440006!GO:0001726;ruffle;0.000369934892716457!GO:0006626;protein targeting to mitochondrion;0.000376381923478352!GO:0005048;signal sequence binding;0.000383946844657631!GO:0007052;mitotic spindle organization and biogenesis;0.000392081169803843!GO:0032561;guanyl ribonucleotide binding;0.000418285038869661!GO:0019001;guanyl nucleotide binding;0.000418285038869661!GO:0008250;oligosaccharyl transferase complex;0.000423311273898021!GO:0065007;biological regulation;0.000434846058094584!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.000454886544845262!GO:0040008;regulation of growth;0.000473146811967871!GO:0031323;regulation of cellular metabolic process;0.000473146811967871!GO:0042802;identical protein binding;0.000473758805609476!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000499983236202533!GO:0005885;Arp2/3 protein complex;0.000510402963932014!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00051876691707875!GO:0006414;translational elongation;0.000543144165694515!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000549637293930573!GO:0003729;mRNA binding;0.000579019026391054!GO:0004576;oligosaccharyl transferase activity;0.000580191784201966!GO:0051052;regulation of DNA metabolic process;0.000603313089474861!GO:0000082;G1/S transition of mitotic cell cycle;0.000604853467484472!GO:0016563;transcription activator activity;0.000621331154638178!GO:0006839;mitochondrial transport;0.000622090304343901!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000627044416343221!GO:0030027;lamellipodium;0.000627159521745417!GO:0004674;protein serine/threonine kinase activity;0.00065187455501888!GO:0003713;transcription coactivator activity;0.000712064305614428!GO:0043681;protein import into mitochondrion;0.000723638698948999!GO:0051920;peroxiredoxin activity;0.000761549670788557!GO:0000314;organellar small ribosomal subunit;0.000855804809664599!GO:0005763;mitochondrial small ribosomal subunit;0.000855804809664599!GO:0051252;regulation of RNA metabolic process;0.000861316933231399!GO:0005876;spindle microtubule;0.000947344797342785!GO:0000910;cytokinesis;0.000965263108648594!GO:0005856;cytoskeleton;0.000971645501151251!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00102663004564003!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00102663004564003!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00102663004564003!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00103057429957625!GO:0005875;microtubule associated complex;0.00103057429957625!GO:0030133;transport vesicle;0.00112251012434308!GO:0033116;ER-Golgi intermediate compartment membrane;0.00118208490041866!GO:0005769;early endosome;0.00119978771998272!GO:0006350;transcription;0.00121941994847877!GO:0051789;response to protein stimulus;0.00123902416459549!GO:0006986;response to unfolded protein;0.00123902416459549!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00142176638540976!GO:0003678;DNA helicase activity;0.00151016820185092!GO:0006383;transcription from RNA polymerase III promoter;0.00151016820185092!GO:0016787;hydrolase activity;0.00159131857211631!GO:0031968;organelle outer membrane;0.00159236624695187!GO:0008186;RNA-dependent ATPase activity;0.00174605526028716!GO:0051128;regulation of cellular component organization and biogenesis;0.00176462929144685!GO:0031072;heat shock protein binding;0.00177324400431358!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00177728461876136!GO:0031124;mRNA 3'-end processing;0.00179101694941395!GO:0018196;peptidyl-asparagine modification;0.00189003264183385!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00189003264183385!GO:0005637;nuclear inner membrane;0.0019448133410049!GO:0008286;insulin receptor signaling pathway;0.00210356903768857!GO:0005684;U2-dependent spliceosome;0.00214340810958502!GO:0003779;actin binding;0.00214340810958502!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00215758603145293!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00217189212899016!GO:0016491;oxidoreductase activity;0.00222945442040899!GO:0016044;membrane organization and biogenesis;0.00227369882018527!GO:0009116;nucleoside metabolic process;0.00228819861699012!GO:0048500;signal recognition particle;0.00241161538513698!GO:0032508;DNA duplex unwinding;0.00251982388984731!GO:0032392;DNA geometric change;0.00251982388984731!GO:0000922;spindle pole;0.00254618923239918!GO:0019867;outer membrane;0.00257481060840892!GO:0043488;regulation of mRNA stability;0.00260941530104885!GO:0043487;regulation of RNA stability;0.00260941530104885!GO:0000228;nuclear chromosome;0.00268113657590745!GO:0048468;cell development;0.00269737862183833!GO:0005791;rough endoplasmic reticulum;0.00271483266097514!GO:0030118;clathrin coat;0.00275908224650026!GO:0046474;glycerophospholipid biosynthetic process;0.00278088866204274!GO:0007006;mitochondrial membrane organization and biogenesis;0.00284399869454578!GO:0030663;COPI coated vesicle membrane;0.00284404995745906!GO:0030126;COPI vesicle coat;0.00284404995745906!GO:0006268;DNA unwinding during replication;0.00287650627742977!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00295170796717475!GO:0005741;mitochondrial outer membrane;0.00298644684611419!GO:0000792;heterochromatin;0.00301257134784729!GO:0006402;mRNA catabolic process;0.00303011159973385!GO:0006891;intra-Golgi vesicle-mediated transport;0.00315813118468402!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00316288519806152!GO:0008139;nuclear localization sequence binding;0.00316288519806152!GO:0048487;beta-tubulin binding;0.00319221527465792!GO:0009165;nucleotide biosynthetic process;0.00336511505612615!GO:0045892;negative regulation of transcription, DNA-dependent;0.00349001673762729!GO:0042393;histone binding;0.00358401611669055!GO:0008312;7S RNA binding;0.00370228687593711!GO:0006352;transcription initiation;0.00371552428021179!GO:0006611;protein export from nucleus;0.0039417464722886!GO:0030521;androgen receptor signaling pathway;0.00425779947361632!GO:0007050;cell cycle arrest;0.00436037798424127!GO:0006284;base-excision repair;0.00437410062547414!GO:0009112;nucleobase metabolic process;0.00444424316348161!GO:0045893;positive regulation of transcription, DNA-dependent;0.00460418522131045!GO:0004004;ATP-dependent RNA helicase activity;0.00460804083324341!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00464174137528302!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00464174137528302!GO:0030134;ER to Golgi transport vesicle;0.00482117729021873!GO:0030137;COPI-coated vesicle;0.00501757342019603!GO:0010468;regulation of gene expression;0.00510887683436862!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00515302554586157!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00524831520205313!GO:0045047;protein targeting to ER;0.00524831520205313!GO:0035258;steroid hormone receptor binding;0.00534842383728561!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.005598763406353!GO:0006595;polyamine metabolic process;0.00565774611163063!GO:0001725;stress fiber;0.00573613693436278!GO:0032432;actin filament bundle;0.00573613693436278!GO:0030127;COPII vesicle coat;0.00580842275756306!GO:0012507;ER to Golgi transport vesicle membrane;0.00580842275756306!GO:0030658;transport vesicle membrane;0.00582136775201496!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00592465572334834!GO:0017166;vinculin binding;0.0061424414706967!GO:0016741;transferase activity, transferring one-carbon groups;0.00629168723548087!GO:0044452;nucleolar part;0.00639268290307136!GO:0016584;nucleosome positioning;0.00641971310472826!GO:0030880;RNA polymerase complex;0.00647306286550472!GO:0030176;integral to endoplasmic reticulum membrane;0.00657999568618241!GO:0006275;regulation of DNA replication;0.00660666576849605!GO:0043284;biopolymer biosynthetic process;0.00666434192279847!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00671161686735838!GO:0016197;endosome transport;0.00704226101254691!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00719938256786373!GO:0006144;purine base metabolic process;0.00727717904312028!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00750865445642589!GO:0007346;regulation of progression through mitotic cell cycle;0.00759234448613874!GO:0043624;cellular protein complex disassembly;0.00766252650900234!GO:0006338;chromatin remodeling;0.00817702690501091!GO:0051287;NAD binding;0.00858577644975721!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00932464299994941!GO:0008017;microtubule binding;0.00944624701180837!GO:0008022;protein C-terminus binding;0.00947221336006215!GO:0000819;sister chromatid segregation;0.00947221336006215!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00947221336006215!GO:0055083;monovalent inorganic anion homeostasis;0.00947221336006215!GO:0055064;chloride ion homeostasis;0.00947221336006215!GO:0030644;cellular chloride ion homeostasis;0.00947221336006215!GO:0000070;mitotic sister chromatid segregation;0.00955442597101856!GO:0006405;RNA export from nucleus;0.00955442597101856!GO:0005869;dynactin complex;0.0095770142345059!GO:0044262;cellular carbohydrate metabolic process;0.00957864535682857!GO:0032984;macromolecular complex disassembly;0.00975703942228829!GO:0008180;signalosome;0.0100983545850353!GO:0007264;small GTPase mediated signal transduction;0.0101341465482429!GO:0005832;chaperonin-containing T-complex;0.0105661630864595!GO:0007243;protein kinase cascade;0.0106013763281058!GO:0008168;methyltransferase activity;0.0106805828460597!GO:0046489;phosphoinositide biosynthetic process;0.0107007864065662!GO:0030660;Golgi-associated vesicle membrane;0.0108087309635766!GO:0003746;translation elongation factor activity;0.0110438825229795!GO:0008610;lipid biosynthetic process;0.0114102890987998!GO:0031123;RNA 3'-end processing;0.0114979364455532!GO:0032774;RNA biosynthetic process;0.0115525486754253!GO:0000049;tRNA binding;0.0118578677349287!GO:0046467;membrane lipid biosynthetic process;0.0123867249155877!GO:0030132;clathrin coat of coated pit;0.0126953933268836!GO:0051087;chaperone binding;0.012773160768461!GO:0030145;manganese ion binding;0.0129501907176612!GO:0000725;recombinational repair;0.0132053045642974!GO:0000724;double-strand break repair via homologous recombination;0.0132053045642974!GO:0006401;RNA catabolic process;0.0132452589370749!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0132720546112804!GO:0000428;DNA-directed RNA polymerase complex;0.0132720546112804!GO:0006351;transcription, DNA-dependent;0.0132755269713986!GO:0003677;DNA binding;0.0132755269713986!GO:0008033;tRNA processing;0.0132755269713986!GO:0032259;methylation;0.0133229748014346!GO:0006378;mRNA polyadenylation;0.0133229748014346!GO:0043241;protein complex disassembly;0.0134094233803473!GO:0008047;enzyme activator activity;0.0134424829257135!GO:0030032;lamellipodium biogenesis;0.0137376229255197!GO:0000096;sulfur amino acid metabolic process;0.0137485354548169!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0139332312286714!GO:0015399;primary active transmembrane transporter activity;0.0139332312286714!GO:0051539;4 iron, 4 sulfur cluster binding;0.0142382725727409!GO:0030119;AP-type membrane coat adaptor complex;0.0143946420776428!GO:0045941;positive regulation of transcription;0.0145730124518005!GO:0030496;midbody;0.0146066147071684!GO:0043596;nuclear replication fork;0.0146223378935909!GO:0040029;regulation of gene expression, epigenetic;0.0146223378935909!GO:0005862;muscle thin filament tropomyosin;0.0146887474263262!GO:0015992;proton transport;0.0147549820369059!GO:0044454;nuclear chromosome part;0.0149302974913399!GO:0043414;biopolymer methylation;0.0151464648204791!GO:0051656;establishment of organelle localization;0.0152443080663524!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0156214902721819!GO:0031529;ruffle organization and biogenesis;0.0159289464427032!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0160125865159215!GO:0006818;hydrogen transport;0.0162483218931755!GO:0032200;telomere organization and biogenesis;0.0166833164531717!GO:0000723;telomere maintenance;0.0166833164531717!GO:0043022;ribosome binding;0.0167765111926499!GO:0031901;early endosome membrane;0.0168446156643178!GO:0046483;heterocycle metabolic process;0.0169131639054908!GO:0016251;general RNA polymerase II transcription factor activity;0.0171400259411366!GO:0006730;one-carbon compound metabolic process;0.0172987369465513!GO:0003711;transcription elongation regulator activity;0.0176706178842185!GO:0000781;chromosome, telomeric region;0.0178952018790204!GO:0000152;nuclear ubiquitin ligase complex;0.0178952018790204!GO:0004527;exonuclease activity;0.0179933570730155!GO:0006270;DNA replication initiation;0.0181321837824894!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0184089498128392!GO:0015002;heme-copper terminal oxidase activity;0.0184089498128392!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0184089498128392!GO:0004129;cytochrome-c oxidase activity;0.0184089498128392!GO:0005758;mitochondrial intermembrane space;0.0185080183272771!GO:0016272;prefoldin complex;0.0192288507691167!GO:0006720;isoprenoid metabolic process;0.0194190230543322!GO:0051098;regulation of binding;0.0198977490327356!GO:0000793;condensed chromosome;0.0199371879180954!GO:0030131;clathrin adaptor complex;0.0200793945784002!GO:0006091;generation of precursor metabolites and energy;0.0202508303578443!GO:0016408;C-acyltransferase activity;0.0206716356238562!GO:0000209;protein polyubiquitination;0.0207014860775825!GO:0051270;regulation of cell motility;0.0207462032811905!GO:0031570;DNA integrity checkpoint;0.0220210104273841!GO:0050681;androgen receptor binding;0.0224953253359853!GO:0000339;RNA cap binding;0.0225334970141419!GO:0003756;protein disulfide isomerase activity;0.022558016815787!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.022558016815787!GO:0031577;spindle checkpoint;0.022558016815787!GO:0000118;histone deacetylase complex;0.0232381759111705!GO:0006220;pyrimidine nucleotide metabolic process;0.0232381759111705!GO:0004003;ATP-dependent DNA helicase activity;0.0234220651996056!GO:0048522;positive regulation of cellular process;0.0237084334350759!GO:0030518;steroid hormone receptor signaling pathway;0.0237962237034801!GO:0006509;membrane protein ectodomain proteolysis;0.0237962237034801!GO:0033619;membrane protein proteolysis;0.0237962237034801!GO:0005773;vacuole;0.0241267718653758!GO:0031970;organelle envelope lumen;0.0250448538138942!GO:0005669;transcription factor TFIID complex;0.0250448538138942!GO:0006289;nucleotide-excision repair;0.0254793178652701!GO:0051101;regulation of DNA binding;0.0257688357939193!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0272837789187044!GO:0005784;translocon complex;0.0288154450450681!GO:0051540;metal cluster binding;0.0294247054101258!GO:0051536;iron-sulfur cluster binding;0.0294247054101258!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0296049086622704!GO:0006007;glucose catabolic process;0.0307821672311296!GO:0007021;tubulin folding;0.0310974925331933!GO:0043130;ubiquitin binding;0.0310974925331933!GO:0032182;small conjugating protein binding;0.0310974925331933!GO:0008143;poly(A) binding;0.0311131602186004!GO:0008536;Ran GTPase binding;0.0317993319396057!GO:0006376;mRNA splice site selection;0.032052809365899!GO:0000389;nuclear mRNA 3'-splice site recognition;0.032052809365899!GO:0065009;regulation of a molecular function;0.0322475927672965!GO:0022890;inorganic cation transmembrane transporter activity;0.0326335824843066!GO:0046128;purine ribonucleoside metabolic process;0.0329374528422434!GO:0042278;purine nucleoside metabolic process;0.0329374528422434!GO:0016301;kinase activity;0.0331838275796728!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0339805023304513!GO:0006740;NADPH regeneration;0.0339805023304513!GO:0006098;pentose-phosphate shunt;0.0339805023304513!GO:0006892;post-Golgi vesicle-mediated transport;0.0345781883344131!GO:0035267;NuA4 histone acetyltransferase complex;0.0346013549656964!GO:0005663;DNA replication factor C complex;0.0347043782722574!GO:0046112;nucleobase biosynthetic process;0.0347869325244891!GO:0006650;glycerophospholipid metabolic process;0.0354320774735674!GO:0031371;ubiquitin conjugating enzyme complex;0.0354320774735674!GO:0000084;S phase of mitotic cell cycle;0.0354382026055066!GO:0008538;proteasome activator activity;0.0354382026055066!GO:0008154;actin polymerization and/or depolymerization;0.0368794445762206!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0369477490396853!GO:0033043;regulation of organelle organization and biogenesis;0.0369477490396853!GO:0016125;sterol metabolic process;0.0369486889150721!GO:0045792;negative regulation of cell size;0.0370732940096826!GO:0005881;cytoplasmic microtubule;0.037114125381493!GO:0043550;regulation of lipid kinase activity;0.0378610646711692!GO:0030911;TPR domain binding;0.0378610646711692!GO:0008652;amino acid biosynthetic process;0.038091047318096!GO:0007004;telomere maintenance via telomerase;0.0385410885777798!GO:0004523;ribonuclease H activity;0.0385410885777798!GO:0000097;sulfur amino acid biosynthetic process;0.0388379876979772!GO:0000086;G2/M transition of mitotic cell cycle;0.0389733476733955!GO:0030308;negative regulation of cell growth;0.0391871665478313!GO:0007018;microtubule-based movement;0.0392374963368426!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0397023084633022!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0402028720906837!GO:0006607;NLS-bearing substrate import into nucleus;0.0406544906561635!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0407955060510156!GO:0032906;transforming growth factor-beta2 production;0.040958635886865!GO:0032909;regulation of transforming growth factor-beta2 production;0.040958635886865!GO:0045045;secretory pathway;0.0414714941221666!GO:0005521;lamin binding;0.0415830435353994!GO:0005871;kinesin complex;0.041730678208394!GO:0050662;coenzyme binding;0.0418890165064088!GO:0016407;acetyltransferase activity;0.0419240986612663!GO:0031625;ubiquitin protein ligase binding;0.0421198785090937!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0426748274249748!GO:0040011;locomotion;0.0428470357813537!GO:0008299;isoprenoid biosynthetic process;0.0428580806737785!GO:0032153;cell division site;0.0428580806737785!GO:0032155;cell division site part;0.0428580806737785!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0428580806737785!GO:0022415;viral reproductive process;0.0430277612386135!GO:0016585;chromatin remodeling complex;0.0432938850039878!GO:0033559;unsaturated fatty acid metabolic process;0.0433295452349828!GO:0006636;unsaturated fatty acid biosynthetic process;0.0433295452349828!GO:0008629;induction of apoptosis by intracellular signals;0.0441087451998464!GO:0006497;protein amino acid lipidation;0.044334583881138!GO:0008276;protein methyltransferase activity;0.0443981959520482!GO:0000178;exosome (RNase complex);0.0445890376915179!GO:0043189;H4/H2A histone acetyltransferase complex;0.0446754087103909!GO:0005680;anaphase-promoting complex;0.0457376036346584!GO:0009303;rRNA transcription;0.0457795281754486!GO:0045449;regulation of transcription;0.0461628206369196!GO:0007034;vacuolar transport;0.0467305616886551!GO:0005938;cell cortex;0.0467852570956169!GO:0031902;late endosome membrane;0.046896331239932!GO:0009003;signal peptidase activity;0.0471820710662972!GO:0007265;Ras protein signal transduction;0.0474931845895444!GO:0005652;nuclear lamina;0.0485398857768203!GO:0007030;Golgi organization and biogenesis;0.0488167043696482!GO:0005096;GTPase activator activity;0.0490846737160457!GO:0017134;fibroblast growth factor binding;0.0496242836048074 | |||
|sample_id=11392 | |sample_id=11392 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=cerebral cortex | |sample_tissue=cerebral cortex | ||
|top_motifs=TFDP1:2.42117043707;GFI1:2.41633997969;OCT4_SOX2{dimer}:2.17714134858;NFY{A,B,C}:1.81518293591;E2F1..5:1.60906684864;XCPE1{core}:1.57435924212;ZIC1..3:1.56953695364;RBPJ:1.5053410036;SOX2:1.49417885796;SOX17:1.47345835292;SOX{8,9,10}:1.40608217929;POU1F1:1.31712864832;ZNF384:1.29549730554;NKX2-3_NKX2-5:1.29398603839;GTF2A1,2:1.28849779428;NKX2-1,4:1.25659737485;PBX1:1.11777427611;MTE{core}:1.09847243876;POU5F1:1.09217525413;MZF1:1.08774246255;PAX6:1.08768414195;LEF1_TCF7_TCF7L1,2:1.08681508918;TFAP2B:1.0796190597;LHX3,4:1.06856362418;GCM1,2:1.06522230956;NKX6-1,2:1.06100077082;BREu{core}:1.00029651818;TOPORS:0.966044642325;SP1:0.949289055438;HIC1:0.949077346554;CDC5L:0.941995436627;EGR1..3:0.923000698265;NR6A1:0.913381925603;ZFP161:0.860868733549;NANOG:0.85206592588;MYB:0.830383271693;NR3C1:0.821325762063;POU3F1..4:0.812814592717;MAZ:0.802444413856;PITX1..3:0.798801578398;ZNF143:0.787569051229;TFAP2{A,C}:0.771443984514;CDX1,2,4:0.769714373061;FOXP1:0.762225874232;NRF1:0.719153186753;ONECUT1,2:0.686635316807;UFEwm:0.669942076315;GFI1B:0.66575009203;TEAD1:0.661584969063;PAX5:0.651029506659;SRF:0.629692993847;POU2F1..3:0.602343862963;EVI1:0.586579194281;GATA4:0.57470011932;HMGA1,2:0.558899873957;GTF2I:0.548786224055;JUN:0.539017314309;RFX1:0.525622230665;TLX1..3_NFIC{dimer}:0.523815823442;ELK1,4_GABP{A,B1}:0.521341205981;MYBL2:0.488682934403;STAT1,3:0.487487099206;ALX1:0.452354573541;PATZ1:0.449889817807;KLF4:0.437778805306;HOX{A4,D4}:0.421472667301;TFAP4:0.383808091427;PAX1,9:0.3835340031;NKX2-2,8:0.344491467084;PRRX1,2:0.34013167103;PAX4:0.306472956005;IKZF2:0.297406531101;STAT5{A,B}:0.274878988707;LMO2:0.273010310086;HSF1,2:0.261537029359;VSX1,2:0.230967328384;IKZF1:0.201028039323;EBF1:0.196160920346;GZF1:0.193546123058;PRDM1:0.188269558223;NKX3-2:0.186326463965;CUX2:0.163090390621;ZBTB6:0.152090803113;RREB1:0.137674194485;AIRE:0.105635555054;EN1,2:0.0940311903161;PAX8:0.0935904438976;MED-1{core}:0.0649669895459;HOXA9_MEIS1:0.0594818189785;FOXP3:0.0501293500414;HMX1:0.0431850287674;NFIX:0.0307902410676;SOX5:0.0086614957741;NHLH1,2:0.00709764822797;T:0.00181452319722;TFCP2:0.00180137793481;AR:-0.0199348366403;TP53:-0.0225527862549;YY1:-0.0446741413003;MEF2{A,B,C,D}:-0.0498122251346;RXR{A,B,G}:-0.0507779931418;MYOD1:-0.0518041445698;ATF4:-0.0654523959585;HOX{A5,B5}:-0.0765871077521;CRX:-0.0785283572098;ALX4:-0.0816222377736;HNF4A_NR2F1,2:-0.102441081285;ESRRA:-0.103855680156;TBP:-0.10809980417;CREB1:-0.109125158262;FOXN1:-0.11112174778;FOXM1:-0.112436533723;FOXD3:-0.120612458615;NR1H4:-0.128793001316;TEF:-0.132217877431;ZBTB16:-0.140942264555;HNF1A:-0.143843151846;STAT2,4,6:-0.15764318022;NFATC1..3:-0.164877766267;ZNF148:-0.1649357868;PAX3,7:-0.173142069006;NANOG{mouse}:-0.175158772416;FOS_FOS{B,L1}_JUN{B,D}:-0.181013617328;NFE2L2:-0.181774509046;MYFfamily:-0.219247318455;BACH2:-0.223015051281;ARID5B:-0.252654724197;ZNF423:-0.282338126665;REST:-0.282932579154;TGIF1:-0.290335088041;NKX3-1:-0.292990989427;MTF1:-0.294487201595;XBP1:-0.303401265015;FOXL1:-0.317628690823;DBP:-0.323076842767;HOX{A6,A7,B6,B7}:-0.326310675965;NFKB1_REL_RELA:-0.332550553736;TBX4,5:-0.364708039219;RUNX1..3:-0.379146231221;FOSL2:-0.379531823513;FOXA2:-0.391856546629;AHR_ARNT_ARNT2:-0.392283238311;EP300:-0.393349189808;RFX2..5_RFXANK_RFXAP:-0.404363021492;NFE2L1:-0.425637679609;SMAD1..7,9:-0.460052269328;NFE2:-0.469067529099;ATF2:-0.471599229955;ADNP_IRX_SIX_ZHX:-0.481326529678;POU6F1:-0.543225652401;BPTF:-0.550871673695;SNAI1..3:-0.555776843621;SPIB:-0.585927293202;MAFB:-0.588665439247;IRF7:-0.593894455575;IRF1,2:-0.628389881532;DMAP1_NCOR{1,2}_SMARC:-0.641822501892;NFIL3:-0.65112311264;SPI1:-0.651718441316;GATA6:-0.666858837415;HBP1_HMGB_SSRP1_UBTF:-0.6705653479;RXRA_VDR{dimer}:-0.703338881927;ELF1,2,4:-0.722076462141;HAND1,2:-0.725935124365;HES1:-0.745086168057;NR5A1,2:-0.747475175543;HLF:-0.747896832386;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.752159449709;SPZ1:-0.769058055706;ESR1:-0.800049370076;ZEB1:-0.813434014151;CEBPA,B_DDIT3:-0.817749076063;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.878466975264;ATF5_CREB3:-0.882855142312;GLI1..3:-0.88598908223;PDX1:-0.921570039909;FOXO1,3,4:-0.922798090032;FOX{D1,D2}:-0.935454872596;ETS1,2:-0.93855449384;TAL1_TCF{3,4,12}:-0.938812733952;PPARG:-1.01115875523;SREBF1,2:-1.04612825745;FOX{F1,F2,J1}:-1.06781316629;RORA:-1.06820066626;PAX2:-1.07171298273;bHLH_family:-1.20830329134;ATF6:-1.22611744819;FOXQ1:-1.24041141445;HIF1A:-1.25011310166;ZNF238:-1.36329755358;FOX{I1,J2}:-1.50534604962;TLX2:-1.58850134722 | |top_motifs=TFDP1:2.42117043707;GFI1:2.41633997969;OCT4_SOX2{dimer}:2.17714134858;NFY{A,B,C}:1.81518293591;E2F1..5:1.60906684864;XCPE1{core}:1.57435924212;ZIC1..3:1.56953695364;RBPJ:1.5053410036;SOX2:1.49417885796;SOX17:1.47345835292;SOX{8,9,10}:1.40608217929;POU1F1:1.31712864832;ZNF384:1.29549730554;NKX2-3_NKX2-5:1.29398603839;GTF2A1,2:1.28849779428;NKX2-1,4:1.25659737485;PBX1:1.11777427611;MTE{core}:1.09847243876;POU5F1:1.09217525413;MZF1:1.08774246255;PAX6:1.08768414195;LEF1_TCF7_TCF7L1,2:1.08681508918;TFAP2B:1.0796190597;LHX3,4:1.06856362418;GCM1,2:1.06522230956;NKX6-1,2:1.06100077082;BREu{core}:1.00029651818;TOPORS:0.966044642325;SP1:0.949289055438;HIC1:0.949077346554;CDC5L:0.941995436627;EGR1..3:0.923000698265;NR6A1:0.913381925603;ZFP161:0.860868733549;NANOG:0.85206592588;MYB:0.830383271693;NR3C1:0.821325762063;POU3F1..4:0.812814592717;MAZ:0.802444413856;PITX1..3:0.798801578398;ZNF143:0.787569051229;TFAP2{A,C}:0.771443984514;CDX1,2,4:0.769714373061;FOXP1:0.762225874232;NRF1:0.719153186753;ONECUT1,2:0.686635316807;UFEwm:0.669942076315;GFI1B:0.66575009203;TEAD1:0.661584969063;PAX5:0.651029506659;SRF:0.629692993847;POU2F1..3:0.602343862963;EVI1:0.586579194281;GATA4:0.57470011932;HMGA1,2:0.558899873957;GTF2I:0.548786224055;JUN:0.539017314309;RFX1:0.525622230665;TLX1..3_NFIC{dimer}:0.523815823442;ELK1,4_GABP{A,B1}:0.521341205981;MYBL2:0.488682934403;STAT1,3:0.487487099206;ALX1:0.452354573541;PATZ1:0.449889817807;KLF4:0.437778805306;HOX{A4,D4}:0.421472667301;TFAP4:0.383808091427;PAX1,9:0.3835340031;NKX2-2,8:0.344491467084;PRRX1,2:0.34013167103;PAX4:0.306472956005;IKZF2:0.297406531101;STAT5{A,B}:0.274878988707;LMO2:0.273010310086;HSF1,2:0.261537029359;VSX1,2:0.230967328384;IKZF1:0.201028039323;EBF1:0.196160920346;GZF1:0.193546123058;PRDM1:0.188269558223;NKX3-2:0.186326463965;CUX2:0.163090390621;ZBTB6:0.152090803113;RREB1:0.137674194485;AIRE:0.105635555054;EN1,2:0.0940311903161;PAX8:0.0935904438976;MED-1{core}:0.0649669895459;HOXA9_MEIS1:0.0594818189785;FOXP3:0.0501293500414;HMX1:0.0431850287674;NFIX:0.0307902410676;SOX5:0.0086614957741;NHLH1,2:0.00709764822797;T:0.00181452319722;TFCP2:0.00180137793481;AR:-0.0199348366403;TP53:-0.0225527862549;YY1:-0.0446741413003;MEF2{A,B,C,D}:-0.0498122251346;RXR{A,B,G}:-0.0507779931418;MYOD1:-0.0518041445698;ATF4:-0.0654523959585;HOX{A5,B5}:-0.0765871077521;CRX:-0.0785283572098;ALX4:-0.0816222377736;HNF4A_NR2F1,2:-0.102441081285;ESRRA:-0.103855680156;TBP:-0.10809980417;CREB1:-0.109125158262;FOXN1:-0.11112174778;FOXM1:-0.112436533723;FOXD3:-0.120612458615;NR1H4:-0.128793001316;TEF:-0.132217877431;ZBTB16:-0.140942264555;HNF1A:-0.143843151846;STAT2,4,6:-0.15764318022;NFATC1..3:-0.164877766267;ZNF148:-0.1649357868;PAX3,7:-0.173142069006;NANOG{mouse}:-0.175158772416;FOS_FOS{B,L1}_JUN{B,D}:-0.181013617328;NFE2L2:-0.181774509046;MYFfamily:-0.219247318455;BACH2:-0.223015051281;ARID5B:-0.252654724197;ZNF423:-0.282338126665;REST:-0.282932579154;TGIF1:-0.290335088041;NKX3-1:-0.292990989427;MTF1:-0.294487201595;XBP1:-0.303401265015;FOXL1:-0.317628690823;DBP:-0.323076842767;HOX{A6,A7,B6,B7}:-0.326310675965;NFKB1_REL_RELA:-0.332550553736;TBX4,5:-0.364708039219;RUNX1..3:-0.379146231221;FOSL2:-0.379531823513;FOXA2:-0.391856546629;AHR_ARNT_ARNT2:-0.392283238311;EP300:-0.393349189808;RFX2..5_RFXANK_RFXAP:-0.404363021492;NFE2L1:-0.425637679609;SMAD1..7,9:-0.460052269328;NFE2:-0.469067529099;ATF2:-0.471599229955;ADNP_IRX_SIX_ZHX:-0.481326529678;POU6F1:-0.543225652401;BPTF:-0.550871673695;SNAI1..3:-0.555776843621;SPIB:-0.585927293202;MAFB:-0.588665439247;IRF7:-0.593894455575;IRF1,2:-0.628389881532;DMAP1_NCOR{1,2}_SMARC:-0.641822501892;NFIL3:-0.65112311264;SPI1:-0.651718441316;GATA6:-0.666858837415;HBP1_HMGB_SSRP1_UBTF:-0.6705653479;RXRA_VDR{dimer}:-0.703338881927;ELF1,2,4:-0.722076462141;HAND1,2:-0.725935124365;HES1:-0.745086168057;NR5A1,2:-0.747475175543;HLF:-0.747896832386;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.752159449709;SPZ1:-0.769058055706;ESR1:-0.800049370076;ZEB1:-0.813434014151;CEBPA,B_DDIT3:-0.817749076063;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.878466975264;ATF5_CREB3:-0.882855142312;GLI1..3:-0.88598908223;PDX1:-0.921570039909;FOXO1,3,4:-0.922798090032;FOX{D1,D2}:-0.935454872596;ETS1,2:-0.93855449384;TAL1_TCF{3,4,12}:-0.938812733952;PPARG:-1.01115875523;SREBF1,2:-1.04612825745;FOX{F1,F2,J1}:-1.06781316629;RORA:-1.06820066626;PAX2:-1.07171298273;bHLH_family:-1.20830329134;ATF6:-1.22611744819;FOXQ1:-1.24041141445;HIF1A:-1.25011310166;ZNF238:-1.36329755358;FOX{I1,J2}:-1.50534604962;TLX2:-1.58850134722 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11392-118C6;search_select_hide=table117:FF:11392-118C6 | |||
}} | }} | ||
Latest revision as of 17:57, 4 June 2020
| Name: | Astrocyte - cerebral cortex, donor3 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12005 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12005
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12005
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0608 |
| 10 | 10 | 0.0898 |
| 100 | 100 | 0.899 |
| 101 | 101 | 0.525 |
| 102 | 102 | 0.64 |
| 103 | 103 | 0.0985 |
| 104 | 104 | 0.871 |
| 105 | 105 | 0.256 |
| 106 | 106 | 0.0478 |
| 107 | 107 | 0.592 |
| 108 | 108 | 0.5 |
| 109 | 109 | 0.0278 |
| 11 | 11 | 0.0613 |
| 110 | 110 | 0.162 |
| 111 | 111 | 0.0405 |
| 112 | 112 | 0.022 |
| 113 | 113 | 0.439 |
| 114 | 114 | 0.00213 |
| 115 | 115 | 0.34 |
| 116 | 116 | 0.893 |
| 117 | 117 | 0.102 |
| 118 | 118 | 0.375 |
| 119 | 119 | 0.179 |
| 12 | 12 | 0.518 |
| 120 | 120 | 0.977 |
| 121 | 121 | 0.775 |
| 122 | 122 | 0.325 |
| 123 | 123 | 0.213 |
| 124 | 124 | 0.345 |
| 125 | 125 | 0.913 |
| 126 | 126 | 0.179 |
| 127 | 127 | 0.0804 |
| 128 | 128 | 0.263 |
| 129 | 129 | 0.246 |
| 13 | 13 | 0.277 |
| 130 | 130 | 0.281 |
| 131 | 131 | 0.449 |
| 132 | 132 | 0.957 |
| 133 | 133 | 0.981 |
| 134 | 134 | 0.861 |
| 135 | 135 | 0.242 |
| 136 | 136 | 0.854 |
| 137 | 137 | 0.158 |
| 138 | 138 | 0.0612 |
| 139 | 139 | 0.0019 |
| 14 | 14 | 0.765 |
| 140 | 140 | 0.101 |
| 141 | 141 | 0.249 |
| 142 | 142 | 0.693 |
| 143 | 143 | 0.00338 |
| 144 | 144 | 0.807 |
| 145 | 145 | 0.818 |
| 146 | 146 | 0.9 |
| 147 | 147 | 0.907 |
| 148 | 148 | 0.0144 |
| 149 | 149 | 0.12 |
| 15 | 15 | 0.0794 |
| 150 | 150 | 0.569 |
| 151 | 151 | 0.325 |
| 152 | 152 | 0.172 |
| 153 | 153 | 0.279 |
| 154 | 154 | 0.95 |
| 155 | 155 | 0.295 |
| 156 | 156 | 0.519 |
| 157 | 157 | 0.358 |
| 158 | 158 | 0.109 |
| 159 | 159 | 0.743 |
| 16 | 16 | 0.233 |
| 160 | 160 | 0.214 |
| 161 | 161 | 0.601 |
| 162 | 162 | 0.936 |
| 163 | 163 | 0.785 |
| 164 | 164 | 0.0596 |
| 165 | 165 | 0.142 |
| 166 | 166 | 0.287 |
| 167 | 167 | 0.623 |
| 168 | 168 | 0.503 |
| 169 | 169 | 0.00924 |
| 17 | 17 | 0.129 |
| 18 | 18 | 0.113 |
| 19 | 19 | 0.412 |
| 2 | 2 | 0.528 |
| 20 | 20 | 0.844 |
| 21 | 21 | 0.619 |
| 22 | 22 | 0.244 |
| 23 | 23 | 0.0714 |
| 24 | 24 | 0.352 |
| 25 | 25 | 0.463 |
| 26 | 26 | 0.369 |
| 27 | 27 | 0.188 |
| 28 | 28 | 0.761 |
| 29 | 29 | 0.133 |
| 3 | 3 | 0.0542 |
| 30 | 30 | 0.89 |
| 31 | 31 | 0.726 |
| 32 | 32 | 0.263 |
| 33 | 33 | 0.52 |
| 34 | 34 | 0.671 |
| 35 | 35 | 0.159 |
| 36 | 36 | 0.0401 |
| 37 | 37 | 0.0506 |
| 38 | 38 | 0.188 |
| 39 | 39 | 0.993 |
| 4 | 4 | 0.648 |
| 40 | 40 | 0.193 |
| 41 | 41 | 0.159 |
| 42 | 42 | 0.186 |
| 43 | 43 | 0.0858 |
| 44 | 44 | 0.343 |
| 45 | 45 | 0.538 |
| 46 | 46 | 0.0472 |
| 47 | 47 | 0.124 |
| 48 | 48 | 0.197 |
| 49 | 49 | 0.0966 |
| 5 | 5 | 0.122 |
| 50 | 50 | 0.781 |
| 51 | 51 | 0.312 |
| 52 | 52 | 0.524 |
| 53 | 53 | 0.6 |
| 54 | 54 | 0.338 |
| 55 | 55 | 0.215 |
| 56 | 56 | 0.458 |
| 57 | 57 | 0.474 |
| 58 | 58 | 0.0621 |
| 59 | 59 | 0.133 |
| 6 | 6 | 0.845 |
| 60 | 60 | 0.0629 |
| 61 | 61 | 0.333 |
| 62 | 62 | 0.0422 |
| 63 | 63 | 0.187 |
| 64 | 64 | 0.291 |
| 65 | 65 | 0.106 |
| 66 | 66 | 0.549 |
| 67 | 67 | 0.774 |
| 68 | 68 | 0.653 |
| 69 | 69 | 0.795 |
| 7 | 7 | 0.282 |
| 70 | 70 | 0.00651 |
| 71 | 71 | 0.0521 |
| 72 | 72 | 0.145 |
| 73 | 73 | 0.116 |
| 74 | 74 | 0.218 |
| 75 | 75 | 0.0463 |
| 76 | 76 | 0.344 |
| 77 | 77 | 0.149 |
| 78 | 78 | 0.211 |
| 79 | 79 | 0.546 |
| 8 | 8 | 0.273 |
| 80 | 80 | 0.24 |
| 81 | 81 | 0.44 |
| 82 | 82 | 0.0169 |
| 83 | 83 | 0.673 |
| 84 | 84 | 0.537 |
| 85 | 85 | 0.0289 |
| 86 | 86 | 0.181 |
| 87 | 87 | 0.94 |
| 88 | 88 | 0.711 |
| 89 | 89 | 0.152 |
| 9 | 9 | 0.285 |
| 90 | 90 | 0.338 |
| 91 | 91 | 0.714 |
| 92 | 92 | 0.0371 |
| 93 | 93 | 0.0769 |
| 94 | 94 | 0.0235 |
| 95 | 95 | 0.125 |
| 96 | 96 | 0.206 |
| 97 | 97 | 0.633 |
| 98 | 98 | 0.206 |
| 99 | 99 | 0.668 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12005
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000194 human astrocyte of the cerebral cortex sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000128 (oligodendrocyte)
0000126 (macroglial cell)
0000125 (glial cell)
0000255 (eukaryotic cell)
0000127 (astrocyte)
0002605 (astrocyte of the cerebral cortex)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0000956 (cerebral cortex)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000194 (human astrocyte of the cerebral cortex sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)
