FF:11757-123H2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005655 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008563;DRR009435;DRZ000860;DRZ002245;DRZ012210;DRZ013595 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002118,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000275 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor1.CNhs12373.11757-123H2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor1.CNhs12373.11757-123H2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor1.CNhs12373.11757-123H2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor1.CNhs12373.11757-123H2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor1.CNhs12373.11757-123H2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11757-123H2 | |id=FF:11757-123H2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000275 | ||
|is_obsolete= | |||
|library_id=CNhs12373 | |||
|library_id_phase_based=2:CNhs12373 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11757 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11757 | |||
|name=mesenchymal precursor cell - ovarian cancer right ovary, donor1 | |name=mesenchymal precursor cell - ovarian cancer right ovary, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12373,LSID914,release011,COMPLETED | |profile_hcage=CNhs12373,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=35.03115 | |rna_weight_ug=35.03115 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.02024951238455e-238!GO:0005737;cytoplasm;5.65151751115169e-196!GO:0043226;organelle;5.2186151653307e-183!GO:0043229;intracellular organelle;1.34547683374943e-182!GO:0043231;intracellular membrane-bound organelle;5.94125834498089e-177!GO:0043227;membrane-bound organelle;9.80139876663836e-177!GO:0044422;organelle part;1.48454718536579e-148!GO:0044446;intracellular organelle part;6.06110481672845e-147!GO:0044444;cytoplasmic part;1.02115799317039e-134!GO:0032991;macromolecular complex;7.52174121449246e-103!GO:0005515;protein binding;2.33801205438886e-85!GO:0030529;ribonucleoprotein complex;2.62114975494074e-84!GO:0044238;primary metabolic process;4.92109286641545e-78!GO:0044237;cellular metabolic process;4.64844582778243e-77!GO:0044428;nuclear part;2.90657713340186e-75!GO:0043170;macromolecule metabolic process;1.31264949659049e-72!GO:0043233;organelle lumen;3.30050161017873e-72!GO:0031974;membrane-enclosed lumen;3.30050161017873e-72!GO:0003723;RNA binding;6.3214317616212e-70!GO:0005634;nucleus;2.35986665019778e-67!GO:0005739;mitochondrion;4.82717768339272e-57!GO:0016043;cellular component organization and biogenesis;1.26852304409327e-54!GO:0043234;protein complex;1.85352964549281e-52!GO:0006396;RNA processing;7.22352885312044e-51!GO:0019538;protein metabolic process;6.04783972617092e-50!GO:0031090;organelle membrane;4.34572812136188e-49!GO:0005840;ribosome;5.23653749008251e-47!GO:0006412;translation;3.21354374222507e-46!GO:0033036;macromolecule localization;4.79076411326707e-46!GO:0015031;protein transport;7.94397638362008e-46!GO:0031981;nuclear lumen;4.80526657491099e-45!GO:0044260;cellular macromolecule metabolic process;2.25982385902645e-43!GO:0044267;cellular protein metabolic process;3.82725675063195e-43!GO:0045184;establishment of protein localization;6.04003228610145e-43!GO:0008104;protein localization;1.94122272236783e-42!GO:0005829;cytosol;1.00793633942522e-41!GO:0043228;non-membrane-bound organelle;1.30014771983462e-41!GO:0043232;intracellular non-membrane-bound organelle;1.30014771983462e-41!GO:0003735;structural constituent of ribosome;1.89008620843924e-41!GO:0044429;mitochondrial part;1.5563713128852e-39!GO:0009058;biosynthetic process;1.09771265332591e-38!GO:0046907;intracellular transport;1.33591101228156e-38!GO:0031967;organelle envelope;6.97025760232438e-38!GO:0016071;mRNA metabolic process;9.34424747031903e-38!GO:0008380;RNA splicing;1.1671333620667e-37!GO:0031975;envelope;1.64040037874797e-37!GO:0006996;organelle organization and biogenesis;9.29991840553937e-37!GO:0009059;macromolecule biosynthetic process;2.64880586416263e-36!GO:0044249;cellular biosynthetic process;2.94674255809754e-36!GO:0043283;biopolymer metabolic process;4.46838638656146e-36!GO:0033279;ribosomal subunit;5.47228736305729e-36!GO:0006397;mRNA processing;6.48695862041073e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.86942915503407e-32!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.74722797423222e-32!GO:0065003;macromolecular complex assembly;9.0335946764642e-32!GO:0010467;gene expression;6.99097395442954e-31!GO:0006886;intracellular protein transport;4.40572920974909e-30!GO:0007049;cell cycle;9.58294402512303e-30!GO:0006259;DNA metabolic process;1.88361836630189e-29!GO:0022607;cellular component assembly;1.97966017040096e-28!GO:0005681;spliceosome;8.35087211329814e-27!GO:0005740;mitochondrial envelope;3.36110753306496e-26!GO:0051649;establishment of cellular localization;3.96050466201445e-26!GO:0051641;cellular localization;7.60093460752856e-26!GO:0005654;nucleoplasm;9.17327950643595e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.04485310820233e-25!GO:0031966;mitochondrial membrane;2.07138796059512e-24!GO:0016462;pyrophosphatase activity;6.20994642129771e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.4126915774842e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;1.05474446094804e-23!GO:0022402;cell cycle process;2.46568522232738e-23!GO:0017111;nucleoside-triphosphatase activity;2.48580446102329e-23!GO:0000166;nucleotide binding;2.83089994798292e-23!GO:0019866;organelle inner membrane;5.09286988972351e-23!GO:0006457;protein folding;1.59619347227734e-22!GO:0000278;mitotic cell cycle;8.64113459173042e-22!GO:0044445;cytosolic part;8.96581102112756e-22!GO:0012505;endomembrane system;1.15496360177579e-21!GO:0006119;oxidative phosphorylation;1.3910747729267e-21!GO:0005743;mitochondrial inner membrane;2.38539642860032e-21!GO:0005783;endoplasmic reticulum;3.39456291018979e-21!GO:0005730;nucleolus;3.52735395061023e-20!GO:0044451;nucleoplasm part;3.54196590482374e-20!GO:0044455;mitochondrial membrane part;1.76355778187639e-19!GO:0015934;large ribosomal subunit;1.01648998090383e-18!GO:0048770;pigment granule;3.30279438303371e-18!GO:0042470;melanosome;3.30279438303371e-18!GO:0006974;response to DNA damage stimulus;5.80152743484546e-18!GO:0015935;small ribosomal subunit;5.94539103250883e-18!GO:0022618;protein-RNA complex assembly;6.16345517699488e-18!GO:0000087;M phase of mitotic cell cycle;8.03838340730849e-18!GO:0000502;proteasome complex (sensu Eukaryota);1.04025432670122e-17!GO:0005794;Golgi apparatus;1.27713062516144e-17!GO:0005694;chromosome;1.34275114021895e-17!GO:0007067;mitosis;1.85713264376538e-17!GO:0032553;ribonucleotide binding;2.03520255325587e-16!GO:0032555;purine ribonucleotide binding;2.03520255325587e-16!GO:0003676;nucleic acid binding;2.04576808811417e-16!GO:0017076;purine nucleotide binding;2.65648190990865e-16!GO:0016874;ligase activity;2.8042775986313e-16!GO:0022403;cell cycle phase;3.92530829111019e-16!GO:0044432;endoplasmic reticulum part;5.62118373411207e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.76197204403516e-16!GO:0005746;mitochondrial respiratory chain;7.90745309644956e-16!GO:0044427;chromosomal part;1.13176596782722e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.14044104211023e-15!GO:0031980;mitochondrial lumen;1.34122650298117e-15!GO:0005759;mitochondrial matrix;1.34122650298117e-15!GO:0051301;cell division;1.4403748763552e-15!GO:0043285;biopolymer catabolic process;1.49242957056816e-15!GO:0048193;Golgi vesicle transport;1.744411752818e-15!GO:0019941;modification-dependent protein catabolic process;2.23585524101354e-15!GO:0043632;modification-dependent macromolecule catabolic process;2.23585524101354e-15!GO:0042254;ribosome biogenesis and assembly;2.6512728871738e-15!GO:0006605;protein targeting;3.13236084111542e-15!GO:0051082;unfolded protein binding;3.35523206322414e-15!GO:0044257;cellular protein catabolic process;3.39371989508922e-15!GO:0008134;transcription factor binding;3.4499004504495e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.40832361007955e-15!GO:0044265;cellular macromolecule catabolic process;4.81763364166761e-15!GO:0006281;DNA repair;7.38135138868287e-15!GO:0006512;ubiquitin cycle;9.96056412651738e-15!GO:0030163;protein catabolic process;1.1656233590411e-14!GO:0008135;translation factor activity, nucleic acid binding;1.39000900974188e-14!GO:0009057;macromolecule catabolic process;1.61427863385022e-14!GO:0051186;cofactor metabolic process;2.2934432076055e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.26485301032318e-14!GO:0003954;NADH dehydrogenase activity;3.26485301032318e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.26485301032318e-14!GO:0000279;M phase;4.46445242985256e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;4.71106284280545e-14!GO:0000375;RNA splicing, via transesterification reactions;4.71106284280545e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.71106284280545e-14!GO:0000074;regulation of progression through cell cycle;4.8430009551244e-14!GO:0051726;regulation of cell cycle;1.23853660819772e-13!GO:0016192;vesicle-mediated transport;1.45038012598346e-13!GO:0005761;mitochondrial ribosome;1.81154385836034e-13!GO:0000313;organellar ribosome;1.81154385836034e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.16945347845472e-13!GO:0044248;cellular catabolic process;3.25826852156602e-13!GO:0005524;ATP binding;4.15211411642863e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.97311727037904e-13!GO:0012501;programmed cell death;8.09666794689513e-13!GO:0032559;adenyl ribonucleotide binding;1.08029125507584e-12!GO:0006260;DNA replication;1.09382862424801e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.3335996910741e-12!GO:0042773;ATP synthesis coupled electron transport;1.3335996910741e-12!GO:0051276;chromosome organization and biogenesis;1.47242786459356e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.47242786459356e-12!GO:0045271;respiratory chain complex I;1.47242786459356e-12!GO:0005747;mitochondrial respiratory chain complex I;1.47242786459356e-12!GO:0006915;apoptosis;1.75140209471801e-12!GO:0030554;adenyl nucleotide binding;1.85309411106069e-12!GO:0005635;nuclear envelope;2.79476498263524e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.85236086201593e-12!GO:0009719;response to endogenous stimulus;4.19508441268109e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.27159708963412e-12!GO:0016887;ATPase activity;4.64528836803569e-12!GO:0008219;cell death;1.35849109283501e-11!GO:0016265;death;1.35849109283501e-11!GO:0005793;ER-Golgi intermediate compartment;1.40999768133465e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.57527069476761e-11!GO:0042623;ATPase activity, coupled;1.69702922897741e-11!GO:0009055;electron carrier activity;1.77289041164186e-11!GO:0009259;ribonucleotide metabolic process;1.89759646946065e-11!GO:0031965;nuclear membrane;1.89759646946065e-11!GO:0048523;negative regulation of cellular process;2.26747224886932e-11!GO:0003743;translation initiation factor activity;2.36220093507938e-11!GO:0006413;translational initiation;2.68116061450743e-11!GO:0016070;RNA metabolic process;2.74215204381739e-11!GO:0006732;coenzyme metabolic process;4.44685472205401e-11!GO:0016604;nuclear body;4.63646235470345e-11!GO:0005789;endoplasmic reticulum membrane;6.42716813937243e-11!GO:0043412;biopolymer modification;6.8263063125755e-11!GO:0006163;purine nucleotide metabolic process;8.98304083852194e-11!GO:0044453;nuclear membrane part;1.22574968400528e-10!GO:0009150;purine ribonucleotide metabolic process;1.83955584604571e-10!GO:0009260;ribonucleotide biosynthetic process;2.69086426846543e-10!GO:0015630;microtubule cytoskeleton;3.70007843551792e-10!GO:0003712;transcription cofactor activity;4.13054181367583e-10!GO:0006364;rRNA processing;4.40318901036649e-10!GO:0004386;helicase activity;4.54363252473684e-10!GO:0006913;nucleocytoplasmic transport;4.61608782175778e-10!GO:0006164;purine nucleotide biosynthetic process;5.20208886464784e-10!GO:0006446;regulation of translational initiation;5.5464358657834e-10!GO:0048519;negative regulation of biological process;9.16544702759093e-10!GO:0051169;nuclear transport;9.99219361047968e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.03069800869375e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.07024178810856e-09!GO:0016072;rRNA metabolic process;1.07193330110019e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.67761963315674e-09!GO:0006399;tRNA metabolic process;1.68817872352748e-09!GO:0006464;protein modification process;1.76221108095235e-09!GO:0008639;small protein conjugating enzyme activity;1.85300450750804e-09!GO:0003924;GTPase activity;2.0436880434176e-09!GO:0008026;ATP-dependent helicase activity;2.12933179191951e-09!GO:0004842;ubiquitin-protein ligase activity;3.61324615283941e-09!GO:0006461;protein complex assembly;3.75229715700877e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.33999439847736e-09!GO:0006323;DNA packaging;4.53761204659554e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.78528219405303e-09!GO:0009141;nucleoside triphosphate metabolic process;5.05255814689974e-09!GO:0019787;small conjugating protein ligase activity;5.59015714979485e-09!GO:0006888;ER to Golgi vesicle-mediated transport;6.82375246059095e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.56440085277035e-09!GO:0009144;purine nucleoside triphosphate metabolic process;8.56440085277035e-09!GO:0006333;chromatin assembly or disassembly;8.66020601827297e-09!GO:0016607;nuclear speck;9.50346153269757e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.13087045629825e-08!GO:0008565;protein transporter activity;1.1452972359686e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.43637365144063e-08!GO:0043067;regulation of programmed cell death;1.57983569348614e-08!GO:0005768;endosome;1.84076162075161e-08!GO:0043069;negative regulation of programmed cell death;1.84440169486779e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.96438230782601e-08!GO:0065004;protein-DNA complex assembly;2.34852125790439e-08!GO:0042981;regulation of apoptosis;2.36338353354968e-08!GO:0015986;ATP synthesis coupled proton transport;2.36338353354968e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.36338353354968e-08!GO:0000785;chromatin;2.3817419239427e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.48108511237186e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.48108511237186e-08!GO:0005643;nuclear pore;2.50017253866318e-08!GO:0009056;catabolic process;3.24165461027254e-08!GO:0009060;aerobic respiration;3.26385359609251e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.40347682013813e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.40124664604283e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.93370337071793e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.93370337071793e-08!GO:0043066;negative regulation of apoptosis;5.13692961586472e-08!GO:0043687;post-translational protein modification;5.13692961586472e-08!GO:0017038;protein import;6.75109020420739e-08!GO:0065002;intracellular protein transport across a membrane;6.85491922760395e-08!GO:0046034;ATP metabolic process;7.54124537048249e-08!GO:0030120;vesicle coat;7.69930549258761e-08!GO:0030662;coated vesicle membrane;7.69930549258761e-08!GO:0051246;regulation of protein metabolic process;8.21663638852422e-08!GO:0016881;acid-amino acid ligase activity;8.21663638852422e-08!GO:0045333;cellular respiration;8.21663638852422e-08!GO:0019829;cation-transporting ATPase activity;8.27756325278421e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.1548008314996e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.1548008314996e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.1548008314996e-07!GO:0005819;spindle;1.17500420944593e-07!GO:0006916;anti-apoptosis;1.4286591003214e-07!GO:0043038;amino acid activation;1.53505750962643e-07!GO:0006418;tRNA aminoacylation for protein translation;1.53505750962643e-07!GO:0043039;tRNA aminoacylation;1.53505750962643e-07!GO:0006403;RNA localization;1.54421583880278e-07!GO:0000775;chromosome, pericentric region;1.61637148100099e-07!GO:0050657;nucleic acid transport;1.7651654075581e-07!GO:0051236;establishment of RNA localization;1.7651654075581e-07!GO:0050658;RNA transport;1.7651654075581e-07!GO:0051188;cofactor biosynthetic process;1.85845020299887e-07!GO:0005788;endoplasmic reticulum lumen;1.94105973807848e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.97931642521004e-07!GO:0009117;nucleotide metabolic process;2.08540162156895e-07!GO:0006099;tricarboxylic acid cycle;2.44104066701796e-07!GO:0046356;acetyl-CoA catabolic process;2.44104066701796e-07!GO:0003697;single-stranded DNA binding;2.73642497845799e-07!GO:0043566;structure-specific DNA binding;2.85004294120229e-07!GO:0006754;ATP biosynthetic process;3.7745946697138e-07!GO:0006753;nucleoside phosphate metabolic process;3.7745946697138e-07!GO:0005813;centrosome;3.91718238075913e-07!GO:0048475;coated membrane;4.25187888061839e-07!GO:0030117;membrane coat;4.25187888061839e-07!GO:0016787;hydrolase activity;4.40392996918151e-07!GO:0016491;oxidoreductase activity;4.47945554635714e-07!GO:0046930;pore complex;4.8118963322553e-07!GO:0050794;regulation of cellular process;4.82957546943276e-07!GO:0006334;nucleosome assembly;5.36355788869221e-07!GO:0044431;Golgi apparatus part;5.4187288955503e-07!GO:0051187;cofactor catabolic process;5.49205093039706e-07!GO:0016779;nucleotidyltransferase activity;6.93913984114414e-07!GO:0031988;membrane-bound vesicle;7.16090015904292e-07!GO:0044440;endosomal part;7.16090015904292e-07!GO:0010008;endosome membrane;7.16090015904292e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.93621336817951e-07!GO:0007051;spindle organization and biogenesis;8.40403152910502e-07!GO:0006084;acetyl-CoA metabolic process;8.43949114275263e-07!GO:0007005;mitochondrion organization and biogenesis;8.70350339808033e-07!GO:0016023;cytoplasmic membrane-bound vesicle;8.93782616526989e-07!GO:0005815;microtubule organizing center;9.46553787853689e-07!GO:0031252;leading edge;1.19856752307351e-06!GO:0000245;spliceosome assembly;1.28549938310523e-06!GO:0006366;transcription from RNA polymerase II promoter;1.36189088556546e-06!GO:0045786;negative regulation of progression through cell cycle;1.45130275929724e-06!GO:0005525;GTP binding;1.64855659034331e-06!GO:0009109;coenzyme catabolic process;2.0211353182156e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.08950516445081e-06!GO:0007010;cytoskeleton organization and biogenesis;2.12008848684476e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.19977199619406e-06!GO:0031497;chromatin assembly;2.32717631131928e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.3686705729665e-06!GO:0016853;isomerase activity;2.85872636522356e-06!GO:0006613;cotranslational protein targeting to membrane;3.18385930208786e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.39132540058936e-06!GO:0051028;mRNA transport;3.53098091365913e-06!GO:0000075;cell cycle checkpoint;3.56330458174754e-06!GO:0032446;protein modification by small protein conjugation;3.61503072765664e-06!GO:0009108;coenzyme biosynthetic process;3.7065571044477e-06!GO:0004298;threonine endopeptidase activity;3.7065571044477e-06!GO:0003714;transcription corepressor activity;3.73036257608759e-06!GO:0016567;protein ubiquitination;4.94547097927201e-06!GO:0003724;RNA helicase activity;6.12094994833221e-06!GO:0031982;vesicle;8.26348527460772e-06!GO:0005770;late endosome;8.26348527460772e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.95599930269211e-06!GO:0051170;nuclear import;9.28850042477877e-06!GO:0045259;proton-transporting ATP synthase complex;1.04114267613175e-05!GO:0031410;cytoplasmic vesicle;1.13328216373248e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.14617293515939e-05!GO:0016859;cis-trans isomerase activity;1.47626678736735e-05!GO:0000139;Golgi membrane;1.48626322664852e-05!GO:0032561;guanyl ribonucleotide binding;1.50952267119298e-05!GO:0019001;guanyl nucleotide binding;1.50952267119298e-05!GO:0005667;transcription factor complex;1.57367091101984e-05!GO:0006752;group transfer coenzyme metabolic process;1.59691219533979e-05!GO:0006261;DNA-dependent DNA replication;1.70003420513829e-05!GO:0043623;cellular protein complex assembly;1.70650876857259e-05!GO:0016568;chromatin modification;1.92867494953824e-05!GO:0005798;Golgi-associated vesicle;2.03174242391976e-05!GO:0006606;protein import into nucleus;2.07209778396636e-05!GO:0016740;transferase activity;2.39748678947612e-05!GO:0000151;ubiquitin ligase complex;2.42419668011257e-05!GO:0000776;kinetochore;2.64802961501213e-05!GO:0048522;positive regulation of cellular process;2.66088517569989e-05!GO:0031324;negative regulation of cellular metabolic process;2.73585342638837e-05!GO:0051329;interphase of mitotic cell cycle;2.80375154037751e-05!GO:0030867;rough endoplasmic reticulum membrane;2.80375154037751e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.86698591486453e-05!GO:0005769;early endosome;3.08447982500313e-05!GO:0006612;protein targeting to membrane;3.28859634459451e-05!GO:0051325;interphase;3.3469312183081e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;3.5326575158209e-05!GO:0006091;generation of precursor metabolites and energy;4.5524603227223e-05!GO:0016564;transcription repressor activity;4.57609394405595e-05!GO:0008094;DNA-dependent ATPase activity;5.00746388247716e-05!GO:0043021;ribonucleoprotein binding;5.47982429557706e-05!GO:0031968;organelle outer membrane;5.60727273585216e-05!GO:0051427;hormone receptor binding;5.73122904867611e-05!GO:0016363;nuclear matrix;6.87361751392744e-05!GO:0008654;phospholipid biosynthetic process;6.89526541321446e-05!GO:0006950;response to stress;8.09077467046635e-05!GO:0006302;double-strand break repair;9.39242805803103e-05!GO:0019867;outer membrane;9.6761478168844e-05!GO:0005048;signal sequence binding;9.86729631328878e-05!GO:0005773;vacuole;9.92833103701113e-05!GO:0005762;mitochondrial large ribosomal subunit;0.000104816626278871!GO:0000315;organellar large ribosomal subunit;0.000104816626278871!GO:0005657;replication fork;0.000110217585896265!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00011408759935686!GO:0035257;nuclear hormone receptor binding;0.000127557665878183!GO:0009892;negative regulation of metabolic process;0.000130173564550543!GO:0007093;mitotic cell cycle checkpoint;0.000138631609742322!GO:0006793;phosphorus metabolic process;0.000140329275152362!GO:0006796;phosphate metabolic process;0.000140329275152362!GO:0003899;DNA-directed RNA polymerase activity;0.000144038199273752!GO:0008361;regulation of cell size;0.000147741003155218!GO:0007243;protein kinase cascade;0.000159893251446602!GO:0016049;cell growth;0.000161123735834919!GO:0050789;regulation of biological process;0.000164478397222321!GO:0015980;energy derivation by oxidation of organic compounds;0.000165125640755138!GO:0045454;cell redox homeostasis;0.000171561161100223!GO:0009165;nucleotide biosynthetic process;0.000178393664172885!GO:0000314;organellar small ribosomal subunit;0.000178393664172885!GO:0005763;mitochondrial small ribosomal subunit;0.000178393664172885!GO:0007059;chromosome segregation;0.000186904630827693!GO:0007088;regulation of mitosis;0.000187374782994002!GO:0003713;transcription coactivator activity;0.000198649326531272!GO:0001558;regulation of cell growth;0.000215017414036973!GO:0030029;actin filament-based process;0.000222452215048667!GO:0016563;transcription activator activity;0.00022278202825963!GO:0033116;ER-Golgi intermediate compartment membrane;0.000230868459661599!GO:0005741;mitochondrial outer membrane;0.000249467379315626!GO:0005885;Arp2/3 protein complex;0.000253216491369752!GO:0008092;cytoskeletal protein binding;0.000254289137228873!GO:0030133;transport vesicle;0.000264838254774855!GO:0016310;phosphorylation;0.000271722413544218!GO:0008186;RNA-dependent ATPase activity;0.000280303235354361!GO:0003690;double-stranded DNA binding;0.000293503339725559!GO:0051789;response to protein stimulus;0.00030250664736339!GO:0006986;response to unfolded protein;0.00030250664736339!GO:0005791;rough endoplasmic reticulum;0.000335787253777951!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000352019146479125!GO:0044452;nucleolar part;0.00036319040998283!GO:0004576;oligosaccharyl transferase activity;0.000378621868144565!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000384850557994652!GO:0008250;oligosaccharyl transferase complex;0.000475362217548337!GO:0000323;lytic vacuole;0.000481918282075338!GO:0005764;lysosome;0.000481918282075338!GO:0007052;mitotic spindle organization and biogenesis;0.000491258944553048!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000496265137079634!GO:0042802;identical protein binding;0.000512630013313399!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000563399627918184!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000586714528729825!GO:0016197;endosome transport;0.00061200215895474!GO:0030663;COPI coated vesicle membrane;0.000628063136372563!GO:0030126;COPI vesicle coat;0.000628063136372563!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000747134640359039!GO:0004004;ATP-dependent RNA helicase activity;0.000752170191800888!GO:0019899;enzyme binding;0.000779006441700718!GO:0005905;coated pit;0.00087252737206457!GO:0006310;DNA recombination;0.000878467007150845!GO:0018196;peptidyl-asparagine modification;0.000913855745331703!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000913855745331703!GO:0006383;transcription from RNA polymerase III promoter;0.000923272247948689!GO:0005874;microtubule;0.000939832574369628!GO:0006839;mitochondrial transport;0.000955476052055124!GO:0007050;cell cycle arrest;0.000958274960634296!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000969364082766448!GO:0031072;heat shock protein binding;0.000980459203906437!GO:0051920;peroxiredoxin activity;0.0010564195510792!GO:0048500;signal recognition particle;0.00107323126887652!GO:0003729;mRNA binding;0.0010823510130699!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00110217383961744!GO:0051168;nuclear export;0.00112658234721594!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00112658234721594!GO:0006891;intra-Golgi vesicle-mediated transport;0.0012481957540237!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00133345109607242!GO:0019843;rRNA binding;0.00140341739034331!GO:0048471;perinuclear region of cytoplasm;0.001468330201284!GO:0001726;ruffle;0.00148201309904175!GO:0051052;regulation of DNA metabolic process;0.00151298868445671!GO:0043681;protein import into mitochondrion;0.0015257460400753!GO:0016044;membrane organization and biogenesis;0.00170120500550635!GO:0008312;7S RNA binding;0.00173622080971841!GO:0009967;positive regulation of signal transduction;0.00173622080971841!GO:0003678;DNA helicase activity;0.00174734587054329!GO:0006626;protein targeting to mitochondrion;0.00176573273863416!GO:0005684;U2-dependent spliceosome;0.00185469991302057!GO:0035258;steroid hormone receptor binding;0.00186703825961621!GO:0003684;damaged DNA binding;0.00186967334281415!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00199106563093042!GO:0030137;COPI-coated vesicle;0.00209260128648946!GO:0030658;transport vesicle membrane;0.00211845524149896!GO:0065009;regulation of a molecular function;0.00211954117159601!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00212276000117218!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00212276000117218!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00212276000117218!GO:0003682;chromatin binding;0.00213417032560128!GO:0008047;enzyme activator activity;0.00216502080103913!GO:0000786;nucleosome;0.00223347510516226!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00231096287537293!GO:0051252;regulation of RNA metabolic process;0.00243274422299308!GO:0030659;cytoplasmic vesicle membrane;0.00248192842981033!GO:0008243;plasminogen activator activity;0.00248192842981033!GO:0008033;tRNA processing;0.00249551029662763!GO:0048518;positive regulation of biological process;0.00260315280218237!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00260315280218237!GO:0045047;protein targeting to ER;0.00260315280218237!GO:0030880;RNA polymerase complex;0.00262479164765342!GO:0003711;transcription elongation regulator activity;0.00275716801024235!GO:0015631;tubulin binding;0.00281130774937618!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00290825610701498!GO:0030027;lamellipodium;0.00291550074505309!GO:0031901;early endosome membrane;0.00294293484628273!GO:0016481;negative regulation of transcription;0.00318664478874649!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00335654775831739!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00336482300372344!GO:0046474;glycerophospholipid biosynthetic process;0.00345433865120068!GO:0008180;signalosome;0.00346957607577595!GO:0006414;translational elongation;0.0034834555359429!GO:0000059;protein import into nucleus, docking;0.00352391161408811!GO:0016126;sterol biosynthetic process;0.00363915856796723!GO:0008139;nuclear localization sequence binding;0.0039702413667342!GO:0048468;cell development;0.0040211571688645!GO:0008022;protein C-terminus binding;0.00416369938663492!GO:0000339;RNA cap binding;0.0043009014098042!GO:0030118;clathrin coat;0.0043609403425511!GO:0030521;androgen receptor signaling pathway;0.00458947605400319!GO:0050681;androgen receptor binding;0.00482984918925524!GO:0044433;cytoplasmic vesicle part;0.00486020162370748!GO:0022406;membrane docking;0.00492178497563537!GO:0048278;vesicle docking;0.00492178497563537!GO:0007264;small GTPase mediated signal transduction;0.00508817361374595!GO:0045045;secretory pathway;0.00510646840453926!GO:0000082;G1/S transition of mitotic cell cycle;0.00518241738217315!GO:0046489;phosphoinositide biosynthetic process;0.00523550959678079!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00539040576624679!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00577892925542653!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00578151717424297!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00579163489233049!GO:0000428;DNA-directed RNA polymerase complex;0.00579163489233049!GO:0005876;spindle microtubule;0.00613164036652943!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00622360938491961!GO:0015399;primary active transmembrane transporter activity;0.00622360938491961!GO:0030134;ER to Golgi transport vesicle;0.00623575733068003!GO:0030660;Golgi-associated vesicle membrane;0.00626868331904565!GO:0017166;vinculin binding;0.00628691488285739!GO:0046483;heterocycle metabolic process;0.00637643366111927!GO:0008632;apoptotic program;0.00641224747751473!GO:0051087;chaperone binding;0.00646308357068325!GO:0043284;biopolymer biosynthetic process;0.00647913643545795!GO:0031124;mRNA 3'-end processing;0.00660031291024858!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00669634807800213!GO:0006892;post-Golgi vesicle-mediated transport;0.00699341078024745!GO:0012506;vesicle membrane;0.00719762476149112!GO:0016272;prefoldin complex;0.00738236551910189!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00770390996635341!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00770390996635341!GO:0044262;cellular carbohydrate metabolic process;0.00771196164763118!GO:0051540;metal cluster binding;0.00780812758271265!GO:0051536;iron-sulfur cluster binding;0.00780812758271265!GO:0046467;membrane lipid biosynthetic process;0.00857951849993572!GO:0006904;vesicle docking during exocytosis;0.00861864231894943!GO:0005862;muscle thin filament tropomyosin;0.00864775509767147!GO:0003746;translation elongation factor activity;0.00879324655133524!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00890926955985063!GO:0030132;clathrin coat of coated pit;0.00915753276832881!GO:0032984;macromolecular complex disassembly;0.00957063445451066!GO:0005869;dynactin complex;0.00990310486959728!GO:0008610;lipid biosynthetic process;0.00995195168981996!GO:0006979;response to oxidative stress;0.0101187856818537!GO:0015992;proton transport;0.0102108257017929!GO:0007017;microtubule-based process;0.0104658789621035!GO:0009116;nucleoside metabolic process;0.0104878395249764!GO:0007006;mitochondrial membrane organization and biogenesis;0.0104956096289866!GO:0043022;ribosome binding;0.0105666467630104!GO:0005832;chaperonin-containing T-complex;0.0106333848982203!GO:0030176;integral to endoplasmic reticulum membrane;0.0106791723359788!GO:0030127;COPII vesicle coat;0.0110375780706728!GO:0012507;ER to Golgi transport vesicle membrane;0.0110375780706728!GO:0006818;hydrogen transport;0.0114252603546328!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0116168291654516!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0116168291654516!GO:0031123;RNA 3'-end processing;0.0117578176804304!GO:0006275;regulation of DNA replication;0.0121856559301669!GO:0050662;coenzyme binding;0.0121856559301669!GO:0016251;general RNA polymerase II transcription factor activity;0.0122979906836525!GO:0004527;exonuclease activity;0.0132077286182962!GO:0051287;NAD binding;0.0132484409984043!GO:0008283;cell proliferation;0.013408864640885!GO:0047485;protein N-terminus binding;0.0135111780925626!GO:0006595;polyamine metabolic process;0.0136220394667303!GO:0032940;secretion by cell;0.0136590414932396!GO:0004003;ATP-dependent DNA helicase activity;0.0140526359815127!GO:0005637;nuclear inner membrane;0.0141164790335041!GO:0030032;lamellipodium biogenesis;0.0141164790335041!GO:0008234;cysteine-type peptidase activity;0.0143471110774828!GO:0005856;cytoskeleton;0.014727081036049!GO:0048487;beta-tubulin binding;0.0149101401152008!GO:0043065;positive regulation of apoptosis;0.0149221629179168!GO:0006695;cholesterol biosynthetic process;0.0153161401546931!GO:0006402;mRNA catabolic process;0.015348693585334!GO:0031418;L-ascorbic acid binding;0.0156129592537509!GO:0016408;C-acyltransferase activity;0.0158830348327903!GO:0030125;clathrin vesicle coat;0.0161311037435933!GO:0030665;clathrin coated vesicle membrane;0.0161311037435933!GO:0007034;vacuolar transport;0.0161381366825971!GO:0005096;GTPase activator activity;0.0163968516027797!GO:0009112;nucleobase metabolic process;0.016548596524166!GO:0031543;peptidyl-proline dioxygenase activity;0.0165540929256805!GO:0000922;spindle pole;0.0172051636335575!GO:0043241;protein complex disassembly;0.0179762759118742!GO:0043068;positive regulation of programmed cell death;0.0180257626517602!GO:0032508;DNA duplex unwinding;0.018039521539407!GO:0032392;DNA geometric change;0.018039521539407!GO:0006289;nucleotide-excision repair;0.0182386264761011!GO:0048144;fibroblast proliferation;0.0182386264761011!GO:0048145;regulation of fibroblast proliferation;0.0182386264761011!GO:0033673;negative regulation of kinase activity;0.0182517470816978!GO:0006469;negative regulation of protein kinase activity;0.0182517470816978!GO:0030119;AP-type membrane coat adaptor complex;0.0184559990724927!GO:0006352;transcription initiation;0.0189791416203171!GO:0043624;cellular protein complex disassembly;0.0191950299989132!GO:0031902;late endosome membrane;0.0192751737297408!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0193053301953958!GO:0065007;biological regulation;0.0194113383458742!GO:0006509;membrane protein ectodomain proteolysis;0.0195764440662845!GO:0033619;membrane protein proteolysis;0.0195764440662845!GO:0006007;glucose catabolic process;0.0196139540944227!GO:0022890;inorganic cation transmembrane transporter activity;0.0198770988369387!GO:0006144;purine base metabolic process;0.0200382541793334!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0200460332400706!GO:0042770;DNA damage response, signal transduction;0.0200574165313734!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0200931187825513!GO:0015002;heme-copper terminal oxidase activity;0.0200931187825513!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0200931187825513!GO:0004129;cytochrome-c oxidase activity;0.0200931187825513!GO:0051128;regulation of cellular component organization and biogenesis;0.0207762789750247!GO:0031970;organelle envelope lumen;0.020839786247833!GO:0000178;exosome (RNase complex);0.0208733594177929!GO:0045936;negative regulation of phosphate metabolic process;0.021378939152121!GO:0006401;RNA catabolic process;0.0214281729523609!GO:0006378;mRNA polyadenylation;0.0214526103284878!GO:0006268;DNA unwinding during replication;0.0215963447219502!GO:0031625;ubiquitin protein ligase binding;0.0215963447219502!GO:0048146;positive regulation of fibroblast proliferation;0.0219267279146052!GO:0000792;heterochromatin;0.0221194128902481!GO:0040008;regulation of growth;0.0221512754955554!GO:0006354;RNA elongation;0.0223767055308416!GO:0006417;regulation of translation;0.0223951176689347!GO:0007021;tubulin folding;0.0226884866027221!GO:0042168;heme metabolic process;0.0231075207659703!GO:0000209;protein polyubiquitination;0.0233984237510374!GO:0050790;regulation of catalytic activity;0.023408629807964!GO:0000086;G2/M transition of mitotic cell cycle;0.023600418169983!GO:0046519;sphingoid metabolic process;0.0236137346712728!GO:0043130;ubiquitin binding;0.0247596504721591!GO:0032182;small conjugating protein binding;0.0247596504721591!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0251285274856467!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0251285274856467!GO:0031529;ruffle organization and biogenesis;0.025132575548682!GO:0019798;procollagen-proline dioxygenase activity;0.0251588938493121!GO:0045792;negative regulation of cell size;0.0258451897267419!GO:0030308;negative regulation of cell growth;0.0259972403603641!GO:0030518;steroid hormone receptor signaling pathway;0.0260158100004592!GO:0006778;porphyrin metabolic process;0.0265074958252079!GO:0033013;tetrapyrrole metabolic process;0.0265074958252079!GO:0000228;nuclear chromosome;0.0265468679530236!GO:0000049;tRNA binding;0.0267023297603963!GO:0022411;cellular component disassembly;0.0276472268892569!GO:0030131;clathrin adaptor complex;0.0277884377096968!GO:0007033;vacuole organization and biogenesis;0.0278087109990384!GO:0003756;protein disulfide isomerase activity;0.0283940382914501!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0283940382914501!GO:0051348;negative regulation of transferase activity;0.0285440777625257!GO:0009124;nucleoside monophosphate biosynthetic process;0.0285501491427508!GO:0009123;nucleoside monophosphate metabolic process;0.0285501491427508!GO:0000910;cytokinesis;0.0295905056266209!GO:0031371;ubiquitin conjugating enzyme complex;0.0297681351664165!GO:0005758;mitochondrial intermembrane space;0.0298544518148433!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0298544518148433!GO:0033043;regulation of organelle organization and biogenesis;0.0298544518148433!GO:0030508;thiol-disulfide exchange intermediate activity;0.030084783864667!GO:0043488;regulation of mRNA stability;0.0301241407921365!GO:0043487;regulation of RNA stability;0.0301241407921365!GO:0051539;4 iron, 4 sulfur cluster binding;0.0301413898974192!GO:0006611;protein export from nucleus;0.030289001863959!GO:0005938;cell cortex;0.030299757458794!GO:0016860;intramolecular oxidoreductase activity;0.0313742304582167!GO:0043492;ATPase activity, coupled to movement of substances;0.0314910549937753!GO:0000726;non-recombinational repair;0.0314910549937753!GO:0008168;methyltransferase activity;0.0317022809598567!GO:0006672;ceramide metabolic process;0.0321824516466275!GO:0008538;proteasome activator activity;0.0322148066495796!GO:0003779;actin binding;0.0324930088346387!GO:0000070;mitotic sister chromatid segregation;0.0327500719045245!GO:0019752;carboxylic acid metabolic process;0.0328030602328167!GO:0007040;lysosome organization and biogenesis;0.0331214401660907!GO:0016584;nucleosome positioning;0.0331214401660907!GO:0004287;prolyl oligopeptidase activity;0.0331214401660907!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0335997453282729!GO:0000819;sister chromatid segregation;0.0335997453282729!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0339030874094692!GO:0030149;sphingolipid catabolic process;0.0339401645214795!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0346842935797901!GO:0031570;DNA integrity checkpoint;0.0353211413749058!GO:0006740;NADPH regeneration;0.0355251905502457!GO:0006098;pentose-phosphate shunt;0.0355251905502457!GO:0006376;mRNA splice site selection;0.0356248880957119!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0356248880957119!GO:0007004;telomere maintenance via telomerase;0.0363853835689372!GO:0016741;transferase activity, transferring one-carbon groups;0.037416362007202!GO:0030384;phosphoinositide metabolic process;0.0375465789565138!GO:0043433;negative regulation of transcription factor activity;0.0376238520702614!GO:0005784;translocon complex;0.0378717968630568!GO:0006082;organic acid metabolic process;0.0385456624855564!GO:0000077;DNA damage checkpoint;0.039433379929228!GO:0004197;cysteine-type endopeptidase activity;0.0397235257118606!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0401487892510339!GO:0030833;regulation of actin filament polymerization;0.0403624701601202!GO:0008154;actin polymerization and/or depolymerization;0.0406010916412606!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0408473757938338!GO:0030041;actin filament polymerization;0.041253204763172!GO:0005669;transcription factor TFIID complex;0.0415347650301379!GO:0004532;exoribonuclease activity;0.0417955265491464!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0417955265491464!GO:0006650;glycerophospholipid metabolic process;0.0421333462993637!GO:0005092;GDP-dissociation inhibitor activity;0.042627489756842!GO:0032200;telomere organization and biogenesis;0.042627489756842!GO:0000723;telomere maintenance;0.042627489756842!GO:0046426;negative regulation of JAK-STAT cascade;0.0426640290536637!GO:0009161;ribonucleoside monophosphate metabolic process;0.0429981821068583!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0429981821068583!GO:0000725;recombinational repair;0.0434052017336619!GO:0000724;double-strand break repair via homologous recombination;0.0434052017336619!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0434537485577362!GO:0042026;protein refolding;0.0435140918170583!GO:0030911;TPR domain binding;0.0436614440334636!GO:0000096;sulfur amino acid metabolic process;0.0438676033591528!GO:0031326;regulation of cellular biosynthetic process;0.044041547609672!GO:0046870;cadmium ion binding;0.0444801184957465!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0444801184957465!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0444801184957465!GO:0042326;negative regulation of phosphorylation;0.0445934652967921!GO:0004674;protein serine/threonine kinase activity;0.0449823494083369!GO:0006497;protein amino acid lipidation;0.0454597684348899!GO:0006118;electron transport;0.0454597684348899!GO:0004518;nuclease activity;0.0455898808266406!GO:0043596;nuclear replication fork;0.0459503897216189!GO:0006405;RNA export from nucleus;0.0464114663753795!GO:0007030;Golgi organization and biogenesis;0.0468226087792522!GO:0005663;DNA replication factor C complex;0.0472893110732236!GO:0006607;NLS-bearing substrate import into nucleus;0.0472915472897757!GO:0006266;DNA ligation;0.0473275688296895!GO:0051338;regulation of transferase activity;0.0482584906290138!GO:0051270;regulation of cell motility;0.0487203162493555!GO:0022408;negative regulation of cell-cell adhesion;0.0490612502061835!GO:0005521;lamin binding;0.0493505168979995!GO:0004448;isocitrate dehydrogenase activity;0.0496665711554879!GO:0006458;'de novo' protein folding;0.049832056154495!GO:0051084;'de novo' posttranslational protein folding;0.049832056154495 | |||
|sample_id=11757 | |sample_id=11757 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=HSF1,2:2.22163968276;GZF1:1.69969883116;HOX{A5,B5}:1.65420910279;POU3F1..4:1.61437249891;NKX3-2:1.59219151732;EN1,2:1.30066456729;GCM1,2:1.16896335578;PAX1,9:1.15633894174;NFIX:1.11562107666;HOX{A4,D4}:1.1103687275;NR3C1:1.07269339892;ZNF384:1.04173709509;SRF:1.00800489138;ALX1:1.00081623947;ZIC1..3:0.989174804033;FOX{I1,J2}:0.989062848748;MYBL2:0.983484416301;NFATC1..3:0.964643426633;ALX4:0.956439510924;NFE2L1:0.940558839402;UFEwm:0.916601187538;CDC5L:0.908214960182;AIRE:0.859361131126;TLX1..3_NFIC{dimer}:0.812735058377;IKZF1:0.789189549762;XBP1:0.780782116248;NKX2-1,4:0.736127484543;GATA4:0.727969610349;NKX2-2,8:0.713871969117;ZNF238:0.701528452268;HIF1A:0.693743938413;EVI1:0.688733472744;TBX4,5:0.688290300964;TBP:0.680571850821;TEF:0.666136374793;FOXM1:0.648408281686;NFE2L2:0.647190335602;PAX8:0.623966986821;TEAD1:0.621468915984;E2F1..5:0.597051966618;CRX:0.592025327045;PRDM1:0.586980153367;PAX4:0.581828378703;KLF4:0.541958040552;BACH2:0.533980069404;FOS_FOS{B,L1}_JUN{B,D}:0.530183212267;HOXA9_MEIS1:0.528981812109;JUN:0.504888206774;ELK1,4_GABP{A,B1}:0.502578523489;GLI1..3:0.497466769964;NKX3-1:0.485904062526;ZBTB16:0.481144776286;SOX17:0.480944645072;TP53:0.470845835854;FOSL2:0.459351150934;HBP1_HMGB_SSRP1_UBTF:0.455760974619;GFI1B:0.427308580382;HLF:0.417845717724;SMAD1..7,9:0.409361049346;MYB:0.379817989471;ADNP_IRX_SIX_ZHX:0.370664343468;GFI1:0.35011071866;MZF1:0.310829616019;MAFB:0.30948789507;POU1F1:0.306291146797;NFE2:0.302466288296;LEF1_TCF7_TCF7L1,2:0.299144204114;AHR_ARNT_ARNT2:0.285801692217;EP300:0.282845447507;CDX1,2,4:0.2777629124;ONECUT1,2:0.276854345224;ELF1,2,4:0.271640998108;SOX2:0.26939850121;TFDP1:0.256557377344;TAL1_TCF{3,4,12}:0.24650676297;RFX1:0.228250908856;ESR1:0.220002013051;FOXN1:0.217708810648;PAX2:0.20904126503;POU6F1:0.199871236661;ZBTB6:0.173287044716;AR:0.158307080131;NRF1:0.148529619081;TLX2:0.141051952133;STAT1,3:0.140739543125;PAX6:0.138141974549;STAT2,4,6:0.136758318539;GTF2I:0.133810598403;YY1:0.12928415709;TFCP2:0.114147184405;FOXD3:0.108867504145;POU5F1:0.0943248450138;ZNF143:0.0859396652925;IRF7:0.0811149641558;ARID5B:0.0579524516054;HMGA1,2:0.0472405216441;RUNX1..3:0.0471746943181;NFIL3:0.046457317114;MAZ:0.0443759278263;IRF1,2:0.031178974703;ATF6:0.0305628901212;NHLH1,2:0.0272059552895;LHX3,4:-0.0147720889919;XCPE1{core}:-0.0256200298341;NR1H4:-0.0305014550609;PAX3,7:-0.0310038082239;PBX1:-0.033420493461;NANOG{mouse}:-0.0462988109215;MTE{core}:-0.0629541279039;GTF2A1,2:-0.0826089005731;EBF1:-0.0975567830015;OCT4_SOX2{dimer}:-0.09936405759;T:-0.106742083818;HNF1A:-0.10765353196;ZNF148:-0.113797273933;NFKB1_REL_RELA:-0.14010807706;TFAP4:-0.141936656324;PRRX1,2:-0.147159669488;NFY{A,B,C}:-0.1522096684;SPZ1:-0.156747262782;FOXO1,3,4:-0.171059352718;MEF2{A,B,C,D}:-0.188423302106;HAND1,2:-0.190339046632;HES1:-0.191915070305;SOX5:-0.218708238108;DMAP1_NCOR{1,2}_SMARC:-0.224847562111;ATF2:-0.234563724811;MYFfamily:-0.237772873976;HMX1:-0.255979995097;ETS1,2:-0.263749264008;POU2F1..3:-0.302725934165;CEBPA,B_DDIT3:-0.308954912839;GATA6:-0.311091919487;RFX2..5_RFXANK_RFXAP:-0.319686676381;RXRA_VDR{dimer}:-0.320268250605;RXR{A,B,G}:-0.324737400458;TGIF1:-0.335035726982;FOXP3:-0.337950123791;SPI1:-0.339135654262;ATF5_CREB3:-0.342229324028;bHLH_family:-0.345421040912;PPARG:-0.346296395014;HNF4A_NR2F1,2:-0.385792623364;PAX5:-0.39915014167;SPIB:-0.42434357336;FOXL1:-0.425287763651;RREB1:-0.426542616167;LMO2:-0.433673312479;NKX6-1,2:-0.434570641587;SNAI1..3:-0.449612013362;HOX{A6,A7,B6,B7}:-0.450054565625;MED-1{core}:-0.466525546717;SOX{8,9,10}:-0.489205587093;STAT5{A,B}:-0.507459582511;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.529477894822;MTF1:-0.529615659849;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.540364048803;CREB1:-0.554712189868;SP1:-0.587773166142;REST:-0.596471257776;NR6A1:-0.608495988699;ZFP161:-0.650326040934;PATZ1:-0.65233936652;FOXA2:-0.668895787783;ZEB1:-0.679579114814;MYOD1:-0.705359652155;CUX2:-0.708481096518;VSX1,2:-0.728289700333;NANOG:-0.736968928241;HIC1:-0.739150100205;IKZF2:-0.740690343203;FOXQ1:-0.750189679987;TOPORS:-0.751158902568;SREBF1,2:-0.755161479284;DBP:-0.776595491198;RORA:-0.78348172737;ATF4:-0.790764335298;RBPJ:-0.806109751206;ESRRA:-0.822543417621;FOX{D1,D2}:-0.826936638942;EGR1..3:-0.936139277285;NR5A1,2:-0.948048115572;FOXP1:-0.949522671664;TFAP2B:-0.949668822657;TFAP2{A,C}:-0.965668673685;ZNF423:-1.0143860543;NKX2-3_NKX2-5:-1.0192807357;BPTF:-1.0356551515;BREu{core}:-1.03655282353;PDX1:-1.06347682511;FOX{F1,F2,J1}:-1.26319107816;PITX1..3:-1.85310199227 | |top_motifs=HSF1,2:2.22163968276;GZF1:1.69969883116;HOX{A5,B5}:1.65420910279;POU3F1..4:1.61437249891;NKX3-2:1.59219151732;EN1,2:1.30066456729;GCM1,2:1.16896335578;PAX1,9:1.15633894174;NFIX:1.11562107666;HOX{A4,D4}:1.1103687275;NR3C1:1.07269339892;ZNF384:1.04173709509;SRF:1.00800489138;ALX1:1.00081623947;ZIC1..3:0.989174804033;FOX{I1,J2}:0.989062848748;MYBL2:0.983484416301;NFATC1..3:0.964643426633;ALX4:0.956439510924;NFE2L1:0.940558839402;UFEwm:0.916601187538;CDC5L:0.908214960182;AIRE:0.859361131126;TLX1..3_NFIC{dimer}:0.812735058377;IKZF1:0.789189549762;XBP1:0.780782116248;NKX2-1,4:0.736127484543;GATA4:0.727969610349;NKX2-2,8:0.713871969117;ZNF238:0.701528452268;HIF1A:0.693743938413;EVI1:0.688733472744;TBX4,5:0.688290300964;TBP:0.680571850821;TEF:0.666136374793;FOXM1:0.648408281686;NFE2L2:0.647190335602;PAX8:0.623966986821;TEAD1:0.621468915984;E2F1..5:0.597051966618;CRX:0.592025327045;PRDM1:0.586980153367;PAX4:0.581828378703;KLF4:0.541958040552;BACH2:0.533980069404;FOS_FOS{B,L1}_JUN{B,D}:0.530183212267;HOXA9_MEIS1:0.528981812109;JUN:0.504888206774;ELK1,4_GABP{A,B1}:0.502578523489;GLI1..3:0.497466769964;NKX3-1:0.485904062526;ZBTB16:0.481144776286;SOX17:0.480944645072;TP53:0.470845835854;FOSL2:0.459351150934;HBP1_HMGB_SSRP1_UBTF:0.455760974619;GFI1B:0.427308580382;HLF:0.417845717724;SMAD1..7,9:0.409361049346;MYB:0.379817989471;ADNP_IRX_SIX_ZHX:0.370664343468;GFI1:0.35011071866;MZF1:0.310829616019;MAFB:0.30948789507;POU1F1:0.306291146797;NFE2:0.302466288296;LEF1_TCF7_TCF7L1,2:0.299144204114;AHR_ARNT_ARNT2:0.285801692217;EP300:0.282845447507;CDX1,2,4:0.2777629124;ONECUT1,2:0.276854345224;ELF1,2,4:0.271640998108;SOX2:0.26939850121;TFDP1:0.256557377344;TAL1_TCF{3,4,12}:0.24650676297;RFX1:0.228250908856;ESR1:0.220002013051;FOXN1:0.217708810648;PAX2:0.20904126503;POU6F1:0.199871236661;ZBTB6:0.173287044716;AR:0.158307080131;NRF1:0.148529619081;TLX2:0.141051952133;STAT1,3:0.140739543125;PAX6:0.138141974549;STAT2,4,6:0.136758318539;GTF2I:0.133810598403;YY1:0.12928415709;TFCP2:0.114147184405;FOXD3:0.108867504145;POU5F1:0.0943248450138;ZNF143:0.0859396652925;IRF7:0.0811149641558;ARID5B:0.0579524516054;HMGA1,2:0.0472405216441;RUNX1..3:0.0471746943181;NFIL3:0.046457317114;MAZ:0.0443759278263;IRF1,2:0.031178974703;ATF6:0.0305628901212;NHLH1,2:0.0272059552895;LHX3,4:-0.0147720889919;XCPE1{core}:-0.0256200298341;NR1H4:-0.0305014550609;PAX3,7:-0.0310038082239;PBX1:-0.033420493461;NANOG{mouse}:-0.0462988109215;MTE{core}:-0.0629541279039;GTF2A1,2:-0.0826089005731;EBF1:-0.0975567830015;OCT4_SOX2{dimer}:-0.09936405759;T:-0.106742083818;HNF1A:-0.10765353196;ZNF148:-0.113797273933;NFKB1_REL_RELA:-0.14010807706;TFAP4:-0.141936656324;PRRX1,2:-0.147159669488;NFY{A,B,C}:-0.1522096684;SPZ1:-0.156747262782;FOXO1,3,4:-0.171059352718;MEF2{A,B,C,D}:-0.188423302106;HAND1,2:-0.190339046632;HES1:-0.191915070305;SOX5:-0.218708238108;DMAP1_NCOR{1,2}_SMARC:-0.224847562111;ATF2:-0.234563724811;MYFfamily:-0.237772873976;HMX1:-0.255979995097;ETS1,2:-0.263749264008;POU2F1..3:-0.302725934165;CEBPA,B_DDIT3:-0.308954912839;GATA6:-0.311091919487;RFX2..5_RFXANK_RFXAP:-0.319686676381;RXRA_VDR{dimer}:-0.320268250605;RXR{A,B,G}:-0.324737400458;TGIF1:-0.335035726982;FOXP3:-0.337950123791;SPI1:-0.339135654262;ATF5_CREB3:-0.342229324028;bHLH_family:-0.345421040912;PPARG:-0.346296395014;HNF4A_NR2F1,2:-0.385792623364;PAX5:-0.39915014167;SPIB:-0.42434357336;FOXL1:-0.425287763651;RREB1:-0.426542616167;LMO2:-0.433673312479;NKX6-1,2:-0.434570641587;SNAI1..3:-0.449612013362;HOX{A6,A7,B6,B7}:-0.450054565625;MED-1{core}:-0.466525546717;SOX{8,9,10}:-0.489205587093;STAT5{A,B}:-0.507459582511;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.529477894822;MTF1:-0.529615659849;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.540364048803;CREB1:-0.554712189868;SP1:-0.587773166142;REST:-0.596471257776;NR6A1:-0.608495988699;ZFP161:-0.650326040934;PATZ1:-0.65233936652;FOXA2:-0.668895787783;ZEB1:-0.679579114814;MYOD1:-0.705359652155;CUX2:-0.708481096518;VSX1,2:-0.728289700333;NANOG:-0.736968928241;HIC1:-0.739150100205;IKZF2:-0.740690343203;FOXQ1:-0.750189679987;TOPORS:-0.751158902568;SREBF1,2:-0.755161479284;DBP:-0.776595491198;RORA:-0.78348172737;ATF4:-0.790764335298;RBPJ:-0.806109751206;ESRRA:-0.822543417621;FOX{D1,D2}:-0.826936638942;EGR1..3:-0.936139277285;NR5A1,2:-0.948048115572;FOXP1:-0.949522671664;TFAP2B:-0.949668822657;TFAP2{A,C}:-0.965668673685;ZNF423:-1.0143860543;NKX2-3_NKX2-5:-1.0192807357;BPTF:-1.0356551515;BREu{core}:-1.03655282353;PDX1:-1.06347682511;FOX{F1,F2,J1}:-1.26319107816;PITX1..3:-1.85310199227 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11757-123H2;search_select_hide=table117:FF:11757-123H2 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer right ovary, donor1 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12373 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12373
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12373
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.323 |
| 10 | 10 | 0.335 |
| 100 | 100 | 0.426 |
| 101 | 101 | 0.727 |
| 102 | 102 | 0.336 |
| 103 | 103 | 0.162 |
| 104 | 104 | 0.882 |
| 105 | 105 | 0.147 |
| 106 | 106 | 0.635 |
| 107 | 107 | 0.293 |
| 108 | 108 | 0.339 |
| 109 | 109 | 0.831 |
| 11 | 11 | 0.866 |
| 110 | 110 | 0.00812 |
| 111 | 111 | 0.141 |
| 112 | 112 | 0.807 |
| 113 | 113 | 0.0318 |
| 114 | 114 | 0.309 |
| 115 | 115 | 0.612 |
| 116 | 116 | 0.662 |
| 117 | 117 | 0.285 |
| 118 | 118 | 0.993 |
| 119 | 119 | 0.483 |
| 12 | 12 | 0.41 |
| 120 | 120 | 0.157 |
| 121 | 121 | 0.884 |
| 122 | 122 | 0.352 |
| 123 | 123 | 5.9201e-4 |
| 124 | 124 | 0.525 |
| 125 | 125 | 0.574 |
| 126 | 126 | 0.748 |
| 127 | 127 | 0.777 |
| 128 | 128 | 0.723 |
| 129 | 129 | 0.793 |
| 13 | 13 | 0.162 |
| 130 | 130 | 0.8 |
| 131 | 131 | 0.00772 |
| 132 | 132 | 0.825 |
| 133 | 133 | 0.856 |
| 134 | 134 | 0.922 |
| 135 | 135 | 0.658 |
| 136 | 136 | 0.706 |
| 137 | 137 | 0.601 |
| 138 | 138 | 0.857 |
| 139 | 139 | 0.282 |
| 14 | 14 | 0.109 |
| 140 | 140 | 0.698 |
| 141 | 141 | 0.852 |
| 142 | 142 | 0.732 |
| 143 | 143 | 0.442 |
| 144 | 144 | 0.826 |
| 145 | 145 | 0.949 |
| 146 | 146 | 0.981 |
| 147 | 147 | 0.0382 |
| 148 | 148 | 0.733 |
| 149 | 149 | 0.398 |
| 15 | 15 | 0.313 |
| 150 | 150 | 0.645 |
| 151 | 151 | 0.501 |
| 152 | 152 | 0.926 |
| 153 | 153 | 0.835 |
| 154 | 154 | 0.491 |
| 155 | 155 | 0.00561 |
| 156 | 156 | 0.356 |
| 157 | 157 | 0.147 |
| 158 | 158 | 0.0151 |
| 159 | 159 | 0.128 |
| 16 | 16 | 0.103 |
| 160 | 160 | 0.771 |
| 161 | 161 | 0.33 |
| 162 | 162 | 0.617 |
| 163 | 163 | 0.0326 |
| 164 | 164 | 0.497 |
| 165 | 165 | 0.779 |
| 166 | 166 | 0.412 |
| 167 | 167 | 0.935 |
| 168 | 168 | 0.792 |
| 169 | 169 | 0.367 |
| 17 | 17 | 0.774 |
| 18 | 18 | 0.261 |
| 19 | 19 | 0.522 |
| 2 | 2 | 0.618 |
| 20 | 20 | 0.304 |
| 21 | 21 | 0.922 |
| 22 | 22 | 0.995 |
| 23 | 23 | 0.118 |
| 24 | 24 | 0.314 |
| 25 | 25 | 0.853 |
| 26 | 26 | 0.905 |
| 27 | 27 | 0.506 |
| 28 | 28 | 0.999 |
| 29 | 29 | 0.039 |
| 3 | 3 | 0.482 |
| 30 | 30 | 0.563 |
| 31 | 31 | 0.273 |
| 32 | 32 | 0.101 |
| 33 | 33 | 0.151 |
| 34 | 34 | 0.36 |
| 35 | 35 | 0.66 |
| 36 | 36 | 0.83 |
| 37 | 37 | 0.158 |
| 38 | 38 | 0.587 |
| 39 | 39 | 0.488 |
| 4 | 4 | 0.0741 |
| 40 | 40 | 0.979 |
| 41 | 41 | 0.902 |
| 42 | 42 | 0.786 |
| 43 | 43 | 0.737 |
| 44 | 44 | 0.99 |
| 45 | 45 | 0.408 |
| 46 | 46 | 0.526 |
| 47 | 47 | 0.979 |
| 48 | 48 | 0.801 |
| 49 | 49 | 0.0977 |
| 5 | 5 | 0.521 |
| 50 | 50 | 0.994 |
| 51 | 51 | 0.657 |
| 52 | 52 | 0.546 |
| 53 | 53 | 0.0404 |
| 54 | 54 | 0.385 |
| 55 | 55 | 0.128 |
| 56 | 56 | 0.46 |
| 57 | 57 | 0.938 |
| 58 | 58 | 0.884 |
| 59 | 59 | 0.94 |
| 6 | 6 | 0.249 |
| 60 | 60 | 0.681 |
| 61 | 61 | 0.558 |
| 62 | 62 | 0.55 |
| 63 | 63 | 0.753 |
| 64 | 64 | 0.468 |
| 65 | 65 | 0.449 |
| 66 | 66 | 0.905 |
| 67 | 67 | 0.55 |
| 68 | 68 | 0.851 |
| 69 | 69 | 0.466 |
| 7 | 7 | 0.844 |
| 70 | 70 | 0.245 |
| 71 | 71 | 0.0847 |
| 72 | 72 | 0.872 |
| 73 | 73 | 0.717 |
| 74 | 74 | 0.13 |
| 75 | 75 | 0.247 |
| 76 | 76 | 0.942 |
| 77 | 77 | 0.213 |
| 78 | 78 | 0.448 |
| 79 | 79 | 0.359 |
| 8 | 8 | 0.357 |
| 80 | 80 | 0.452 |
| 81 | 81 | 0.876 |
| 82 | 82 | 0.314 |
| 83 | 83 | 0.167 |
| 84 | 84 | 0.827 |
| 85 | 85 | 0.731 |
| 86 | 86 | 0.894 |
| 87 | 87 | 0.376 |
| 88 | 88 | 0.644 |
| 89 | 89 | 0.0732 |
| 9 | 9 | 0.484 |
| 90 | 90 | 0.192 |
| 91 | 91 | 0.964 |
| 92 | 92 | 0.671 |
| 93 | 93 | 0.529 |
| 94 | 94 | 0.781 |
| 95 | 95 | 0.243 |
| 96 | 96 | 0.504 |
| 97 | 97 | 0.244 |
| 98 | 98 | 0.134 |
| 99 | 99 | 0.0821 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12373
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000275 human mesenchymal precursor cell- ovarian cancer-right ovary sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
