FF:11755-123G9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005356 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008554;DRR009426;DRZ000851;DRZ002236;DRZ012201;DRZ013586 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor4.CNhs12371.11755-123G9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11755-123G9 | |id=FF:11755-123G9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000271 | ||
|is_obsolete= | |||
|library_id=CNhs12371 | |||
|library_id_phase_based=2:CNhs12371 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11755 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11755 | |||
|name=mesenchymal precursor cell - cardiac, donor4 | |name=mesenchymal precursor cell - cardiac, donor4 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12371,LSID914,release011,COMPLETED | |profile_hcage=CNhs12371,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0800504117133841,0,-0.277362132193514,0.0393557642563295,0,0,0,0,0,0,0,0,0,0,0.0598870870782869,0,0,0.155238426082442,0,0,0.0115611154584694,0,0,0.269527799753586,0,0,0.0688283856569037,0,0,0,0,0,0,0,0,0,0,0.0598870870782869,0,-0.0450072292481299,0.112507911114448,0.112507911114448,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.0598870870782869,0,0,0,0.178809664597455,0,0,-0.03745654013481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.051186570838909,0,0,0,0,0,0,0,0,0,0,-0.167114904505955,-0.0274545546850469,0,0.112507911114448,0,0,-0.0980353512377064,0.134395098840736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0664300503833175,0.0598870870782869,0,0,-0.058426464621741,-0.223386494122099,0,0,0.0504041658424383,0,0,0 | |||
|repeat_enrich_byname=0,0,0.112507911114448,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0.112507911114448,0,0,-0.247178875285564,0,-0.198284192911948,-0.083628055445185,0.056253955557224,0,0.0395571521926582,0,0,0,0,0,0,0,0,0,0.291242102374691,0,0.225389474250745,0.0598870870782869,0.0598870870782869,0,0,0.110141842463215,0.0335499113575509,0,0.0473156598068067,-0.00845717399908128,0,0,0,0,0.309285997221242,0,-0.120879483793741,0.256301973932541,0,0.13511645282281,-0.0336356798938642,0,0,0.0299435435391435,0.375158135378145,0.257863922417561,0,0,0.0325008664635611,0.174129583554714,0,0,0.750825111429578,0,0.201766241790492,0.0771915010915367,0,0.0128025664396738,0,0,0,0,0,0,0,0,0,0,0,-0.00123951126421248,-0.051186570838909,0,0,0,0,-0.292977051625625,0,1.60440969906029e-05,-0.171501180520801,-0.0678470010490949,0,-0.416632455505634,0,0.036632415246045,-0.0772098301733286,-0.510274459297912,-0.167114904505955,0.0120346298161259,0.177503976471796,0,0.0294422569676569,0.0246746458968883,0.0186640035287328,-0.0737257153879369,-0.023668867287942,0.639791581855817,0.0137160384656367,0,0,0.029892154265234,0.158760887542726,0,-0.145119135817453,-0.214312688636714,-0.0292913702715931,-0.067827868240394,-0.230032892277077,-0.0073908899110615,-0.0745323039091048,0.267879555591338,-0.29799997370933,0.0042594096614794,0.474926028305562,0,0,-0.0569966127034942,0.0455295651654709,0.0894748476151733,-0.0521798618836765,0,-0.371469550696532,0.0441636500370801,0,-0.077260536922976,-0.203138719811646,0,0,-0.159415261544156,0,0,0.0636957975993497,0,0.112507911114448,-0.00877657063485215,-0.263690117190106,-0.0734190823682803,0,-0.147011788437264,0.0598870870782869,0.00140259699920714,0,-0.215268355969447,-0.0539670570974868,-0.0883718403090414,-0.254554166774529,0,-0.10932539601814,0.0502454020943679,0.0367942790967631,-0.0549091093700939,-0.0584468268118252,-0.166825622480729,-0.111003297046738,-0.164900783911509,0.0949191861296095,0.0143305829070837,0.250895309780671,-0.0100865797972617,0.16575102520269,0.236687384717061,-0.0948225645311498,-0.224651134508229,0.0598870870782869,-0.04644309575716,0,-0.0450612804193067,0,-0.0592068396560309,0.182841215622411,-0.23750439914492,0.162968913682107,0,-0.263750447016849,0.548323212223417,0,0.0525679134399342,0.0045727980761096,0,0.0900013584651309,-0.100318611808995,-0.0174954593873351,0.252692918811419,0,0.332855476703007,0,0,0.00710302256827255,-0.0760395585771242,0,-0.0779702127304751,-0.166055472300763,-0.0584714419120322,-0.115971073434934,0,0,-0.48626385880546,0,0,-0.118793635224926,0.0674270218071964,-0.280761181702675,-0.253326341486756,0,-0.022425310357888,0,0,0.0628406758345945,0,0.126126810995851,0,0,0.114547756964629,0.00414623646932777,0,0,0.367485696021644,0,0,0,0,0,0,0,0,-0.476659583608258,0.190911269066814,0,-0.0562154652089747,0,0.0598870870782869,0,0.339022142255958,0,0,0,0.201784975435766,0.479379712143041,0,0.15278461016364,0,0,0,0,0.0928380338773953,-0.203236562094724,0.0598870870782869,-0.0719756194193448,0,0,0,0,-0.0861409897892114,0,0.419361969327256,0,0,-0.057730457053664,-0.185060226230693,0,0,0,0.268790197681472,0,0,0,0,-0.0247098389503662,0,0,0.18882911762446,0,-0.204765144414036,-0.0815818795468414,0,-0.0182639026648715,-0.214893405367908,-0.0914843718655738,0,0,-0.261347131789888,0,0,0.306388160648459,0,0,0.0090187675930265,0,0,0,0,0,0,-0.101806601285307,0,0,0,0,0,0,0,0,0,0,0,0.185309921093385,0.0202838544559379,0.24036844179977,0,0,0,0,0.0299435435391435,0,0.515949355134217,-0.0720468821638606,0,0,0,0,0,0,0,0,-0.162864503232372,0,0,0,0,0,0.178809664597455,0,0,0,0,0.078711528512659,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0108111749209994,-0.367093376813626,0,0,0,0,0,0,0,-0.0344648564063203,0,0,0,0,-0.00137646259452884,0,0,0,-0.104796384789156,0,0.0800504117133841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100892487717883,0.079718239593632,0,0,0.24740663673428,0.05494266081341,-0.0254052043560061,-0.112417730499855,0,0,0.10998419962619,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0.0598870870782869,0,0,0,0,0,0,0,0,0.0598870870782869,0,0,0,0,0,0,-0.00511397192769065,0,0,0,0,0.24036844179977,0,0,0.269527799753586,0.394197947202611,0,-0.0920328098005262,0,0,0,0,0.0598870870782869,0,0.0245901956437858,0.313702997402763,-0.00657530283617741,0,0,0,0.142713401118851,0.0598870870782869,0,0,0,0.352584581908355,0,0,0,0,0,0,0,0,0.112507911114448,0,0,0,0,0,0,0,0,0.0598870870782869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155238426082442,0,0,0,0,0,0,0,0,0,0,0,0,0.079718239593632,0,0,0,0,0,0,0,0,0,0,0,0,0.112507911114448,0,0,0,0,0,0,0,0,0.0598870870782869,0.0258757238028704,0,0,0,0,0,0,0,0.112507911114448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0598870870782869,0.079418010918626,0,0,0,0.415590087771635,0,0,0,0,0,0,0.112507911114448,0,0.0598870870782869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112507911114448,0,0.0598870870782869,0,-0.129626841110335,0,0,0,0,0,0,0,0,0.0598870870782869,0,0,0,0,0.0116650118392327,0,-0.0843766322300271,0,0,0,0,0,0.112507911114448,0,0,0,0,0,0.11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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=40.28625 | |rna_weight_ug=40.28625 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.50809543104032e-230!GO:0005737;cytoplasm;1.02994541893457e-194!GO:0043226;organelle;4.68834211921062e-181!GO:0043229;intracellular organelle;1.49754827789428e-180!GO:0043231;intracellular membrane-bound organelle;6.4428376685662e-180!GO:0043227;membrane-bound organelle;1.25009388402093e-179!GO:0044422;organelle part;3.40758221432262e-143!GO:0044444;cytoplasmic part;3.43916640628358e-143!GO:0044446;intracellular organelle part;1.29341635833492e-141!GO:0032991;macromolecular complex;8.04495661744138e-95!GO:0030529;ribonucleoprotein complex;4.74760575282518e-85!GO:0044238;primary metabolic process;6.72763708091635e-82!GO:0044237;cellular metabolic process;2.41545340770337e-81!GO:0005515;protein binding;4.14313201361413e-81!GO:0043170;macromolecule metabolic process;4.47568618524212e-76!GO:0044428;nuclear part;3.88192346847425e-67!GO:0043233;organelle lumen;4.00808532651309e-67!GO:0031974;membrane-enclosed lumen;4.00808532651309e-67!GO:0003723;RNA binding;2.28366235487361e-65!GO:0005634;nucleus;4.31637963117689e-63!GO:0005739;mitochondrion;4.53586172928387e-60!GO:0031090;organelle membrane;1.01578627854281e-53!GO:0019538;protein metabolic process;6.69825527055887e-52!GO:0005840;ribosome;9.08619117177347e-52!GO:0006412;translation;4.18010417531827e-49!GO:0016043;cellular component organization and biogenesis;1.95057627960669e-48!GO:0043234;protein complex;5.15393324687533e-47!GO:0044260;cellular macromolecule metabolic process;3.77108856388143e-46!GO:0003735;structural constituent of ribosome;4.3087707706105e-46!GO:0044267;cellular protein metabolic process;9.12562932903453e-46!GO:0006396;RNA processing;4.55846214682984e-45!GO:0015031;protein transport;5.87847664087972e-45!GO:0033036;macromolecule localization;3.00766936165982e-44!GO:0005829;cytosol;1.09819970440431e-42!GO:0009058;biosynthetic process;3.3434280700304e-42!GO:0045184;establishment of protein localization;4.60616449039799e-42!GO:0008104;protein localization;2.27417208928323e-41!GO:0044429;mitochondrial part;8.52279951466786e-41!GO:0033279;ribosomal subunit;4.79100406167296e-40!GO:0009059;macromolecule biosynthetic process;1.01091072129608e-39!GO:0043283;biopolymer metabolic process;1.6637590347481e-39!GO:0031981;nuclear lumen;1.70674690436476e-39!GO:0031967;organelle envelope;1.70514773112866e-38!GO:0031975;envelope;2.95019425812247e-38!GO:0044249;cellular biosynthetic process;1.17534043655341e-37!GO:0016071;mRNA metabolic process;2.45483086406844e-35!GO:0046907;intracellular transport;9.33276967067983e-35!GO:0008380;RNA splicing;1.79677131840126e-34!GO:0043228;non-membrane-bound organelle;1.00491202213578e-32!GO:0043232;intracellular non-membrane-bound organelle;1.00491202213578e-32!GO:0010467;gene expression;3.51154494124126e-32!GO:0006397;mRNA processing;1.76757879005231e-31!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.96849080531475e-31!GO:0006996;organelle organization and biogenesis;7.46777866710547e-31!GO:0065003;macromolecular complex assembly;3.28810214627961e-30!GO:0006886;intracellular protein transport;4.71708466186888e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.06819188221478e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.7213095896681e-29!GO:0005740;mitochondrial envelope;1.84339615483598e-27!GO:0006259;DNA metabolic process;3.43626359257328e-27!GO:0005783;endoplasmic reticulum;4.07802656201934e-27!GO:0022607;cellular component assembly;2.65527656814039e-26!GO:0031966;mitochondrial membrane;1.20867872772768e-25!GO:0019866;organelle inner membrane;1.26434736210302e-24!GO:0007049;cell cycle;1.48032667041229e-24!GO:0005681;spliceosome;3.18017933107523e-24!GO:0012505;endomembrane system;8.91028993694972e-24!GO:0005654;nucleoplasm;1.00278964673269e-23!GO:0044445;cytosolic part;2.73940848734628e-23!GO:0006119;oxidative phosphorylation;3.61229692659776e-23!GO:0005743;mitochondrial inner membrane;6.10018465089226e-23!GO:0016462;pyrophosphatase activity;8.48136886943725e-23!GO:0051649;establishment of cellular localization;1.02212931652251e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.11162954771829e-22!GO:0051641;cellular localization;1.21639167578617e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.93211262701782e-22!GO:0017111;nucleoside-triphosphatase activity;2.43079573514602e-22!GO:0006457;protein folding;2.44325724986795e-22!GO:0000166;nucleotide binding;1.09968342493247e-21!GO:0015935;small ribosomal subunit;1.49123317211975e-20!GO:0015934;large ribosomal subunit;1.84752417598644e-20!GO:0044432;endoplasmic reticulum part;2.08779740246449e-20!GO:0044455;mitochondrial membrane part;2.27163929778768e-19!GO:0022402;cell cycle process;4.16840196830521e-19!GO:0044451;nucleoplasm part;5.26607916578091e-19!GO:0005794;Golgi apparatus;7.81527361025838e-19!GO:0048770;pigment granule;1.27798860255984e-18!GO:0042470;melanosome;1.27798860255984e-18!GO:0022618;protein-RNA complex assembly;4.87441966465193e-18!GO:0000278;mitotic cell cycle;7.95111933395395e-18!GO:0000502;proteasome complex (sensu Eukaryota);3.33292895444903e-17!GO:0005746;mitochondrial respiratory chain;4.66873966416022e-17!GO:0003676;nucleic acid binding;1.07793691437102e-16!GO:0043285;biopolymer catabolic process;1.90165202515789e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.36290343191354e-16!GO:0005730;nucleolus;2.62589908390632e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.05864869994964e-16!GO:0031980;mitochondrial lumen;4.49712228402825e-16!GO:0005759;mitochondrial matrix;4.49712228402825e-16!GO:0019941;modification-dependent protein catabolic process;7.01882108536008e-16!GO:0043632;modification-dependent macromolecule catabolic process;7.01882108536008e-16!GO:0030163;protein catabolic process;1.01329402787514e-15!GO:0044257;cellular protein catabolic process;1.18836446575192e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.36832466004909e-15!GO:0051186;cofactor metabolic process;1.44332783522187e-15!GO:0006605;protein targeting;1.48911984253948e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.49043096475771e-15!GO:0032553;ribonucleotide binding;1.65677649194798e-15!GO:0032555;purine ribonucleotide binding;1.65677649194798e-15!GO:0044265;cellular macromolecule catabolic process;1.84225833019096e-15!GO:0017076;purine nucleotide binding;1.84225833019096e-15!GO:0005694;chromosome;1.95236836313623e-15!GO:0006974;response to DNA damage stimulus;2.29561779728568e-15!GO:0008134;transcription factor binding;2.37525798365106e-15!GO:0051082;unfolded protein binding;2.54806491428093e-15!GO:0009057;macromolecule catabolic process;5.14768423349489e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.14768423349489e-15!GO:0003954;NADH dehydrogenase activity;5.14768423349489e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.14768423349489e-15!GO:0006512;ubiquitin cycle;7.54964136980249e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.70241092837071e-15!GO:0008135;translation factor activity, nucleic acid binding;7.81425778701353e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.01513580578878e-14!GO:0016874;ligase activity;1.0799045682093e-14!GO:0044427;chromosomal part;2.05098823478472e-14!GO:0005761;mitochondrial ribosome;2.31078679480894e-14!GO:0000313;organellar ribosome;2.31078679480894e-14!GO:0005789;endoplasmic reticulum membrane;3.08812771799644e-14!GO:0048193;Golgi vesicle transport;5.26609269343566e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.52730809299564e-14!GO:0044248;cellular catabolic process;2.03266014246841e-13!GO:0000087;M phase of mitotic cell cycle;2.1448951542086e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.90376872909358e-13!GO:0042773;ATP synthesis coupled electron transport;2.90376872909358e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.3680623348528e-13!GO:0045271;respiratory chain complex I;3.3680623348528e-13!GO:0005747;mitochondrial respiratory chain complex I;3.3680623348528e-13!GO:0007067;mitosis;3.62711848532432e-13!GO:0005793;ER-Golgi intermediate compartment;4.75558305483509e-13!GO:0006281;DNA repair;5.37876643663645e-13!GO:0051301;cell division;6.94237110935317e-13!GO:0016192;vesicle-mediated transport;7.27324509069564e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;9.13315671142812e-13!GO:0000375;RNA splicing, via transesterification reactions;9.13315671142812e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.13315671142812e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.01021230714461e-12!GO:0043412;biopolymer modification;1.01100879883937e-12!GO:0022403;cell cycle phase;1.28834406144241e-12!GO:0006732;coenzyme metabolic process;1.8983142831639e-12!GO:0042254;ribosome biogenesis and assembly;2.04815451110198e-12!GO:0005524;ATP binding;2.3508428866004e-12!GO:0003743;translation initiation factor activity;3.10865007344386e-12!GO:0012501;programmed cell death;3.40984038964503e-12!GO:0016070;RNA metabolic process;5.18503562815991e-12!GO:0032559;adenyl ribonucleotide binding;6.39660745234722e-12!GO:0009259;ribonucleotide metabolic process;6.75117561158824e-12!GO:0006260;DNA replication;7.05308250344377e-12!GO:0006915;apoptosis;8.65518188679392e-12!GO:0030554;adenyl nucleotide binding;9.49893167324331e-12!GO:0006413;translational initiation;9.88298810801008e-12!GO:0005635;nuclear envelope;1.16261726529378e-11!GO:0051726;regulation of cell cycle;1.53242545211972e-11!GO:0006163;purine nucleotide metabolic process;1.62417346947656e-11!GO:0016887;ATPase activity;1.67038220756583e-11!GO:0048523;negative regulation of cellular process;1.75333515114638e-11!GO:0051276;chromosome organization and biogenesis;1.78095633966715e-11!GO:0000074;regulation of progression through cell cycle;1.86930445211484e-11!GO:0006464;protein modification process;2.06367657177683e-11!GO:0009055;electron carrier activity;2.47702390600204e-11!GO:0031965;nuclear membrane;2.47702390600204e-11!GO:0009719;response to endogenous stimulus;4.22399584812408e-11!GO:0009150;purine ribonucleotide metabolic process;4.2604194455865e-11!GO:0042623;ATPase activity, coupled;7.43285269068669e-11!GO:0008219;cell death;7.43285269068669e-11!GO:0016265;death;7.43285269068669e-11!GO:0044453;nuclear membrane part;1.25390836869016e-10!GO:0006164;purine nucleotide biosynthetic process;1.45977729052034e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.78726152719946e-10!GO:0016604;nuclear body;2.02924156573138e-10!GO:0009260;ribonucleotide biosynthetic process;2.2164948096022e-10!GO:0000279;M phase;2.98271605890369e-10!GO:0009152;purine ribonucleotide biosynthetic process;3.85821255459875e-10!GO:0009199;ribonucleoside triphosphate metabolic process;5.42863201404941e-10!GO:0009141;nucleoside triphosphate metabolic process;5.42863201404941e-10!GO:0006913;nucleocytoplasmic transport;5.51186104119175e-10!GO:0006446;regulation of translational initiation;7.14643257251409e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.3602582512773e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.9094273965641e-10!GO:0009144;purine nucleoside triphosphate metabolic process;9.9094273965641e-10!GO:0048519;negative regulation of biological process;1.10384085383343e-09!GO:0051169;nuclear transport;1.13087979702332e-09!GO:0003712;transcription cofactor activity;1.96178624277996e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;2.69226305994758e-09!GO:0015986;ATP synthesis coupled proton transport;3.41602866607894e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.41602866607894e-09!GO:0043687;post-translational protein modification;4.04397284139919e-09!GO:0005768;endosome;4.16867154548629e-09!GO:0009142;nucleoside triphosphate biosynthetic process;4.42913329751764e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.42913329751764e-09!GO:0003924;GTPase activity;5.84478092664025e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.84478092664025e-09!GO:0009060;aerobic respiration;6.37194451271381e-09!GO:0065004;protein-DNA complex assembly;6.80842646173926e-09!GO:0006323;DNA packaging;7.54144371465382e-09!GO:0008639;small protein conjugating enzyme activity;7.57206984256948e-09!GO:0046034;ATP metabolic process;8.00716258884454e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.1200191286111e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.1200191286111e-09!GO:0016491;oxidoreductase activity;8.7381780469474e-09!GO:0019787;small conjugating protein ligase activity;8.91399591053879e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.52688736038755e-09!GO:0006333;chromatin assembly or disassembly;1.05825275099737e-08!GO:0005788;endoplasmic reticulum lumen;1.26964051151851e-08!GO:0008565;protein transporter activity;1.30553480265495e-08!GO:0004842;ubiquitin-protein ligase activity;1.46924181620267e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.67474278236669e-08!GO:0051246;regulation of protein metabolic process;1.86455864530197e-08!GO:0009056;catabolic process;1.97211507362701e-08!GO:0004386;helicase activity;1.98438057930521e-08!GO:0045333;cellular respiration;2.36961101394265e-08!GO:0044431;Golgi apparatus part;2.39712040515649e-08!GO:0019829;cation-transporting ATPase activity;2.58277956181732e-08!GO:0005643;nuclear pore;2.66801864594414e-08!GO:0006399;tRNA metabolic process;2.77202302461305e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.15210378253084e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.20153834408228e-08!GO:0000785;chromatin;3.42693862341376e-08!GO:0015630;microtubule cytoskeleton;3.87612158319324e-08!GO:0017038;protein import;4.02474458280988e-08!GO:0006364;rRNA processing;4.26961161062678e-08!GO:0016607;nuclear speck;4.5737096090962e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.68314960826832e-08!GO:0065002;intracellular protein transport across a membrane;4.73825736479001e-08!GO:0006754;ATP biosynthetic process;5.4342942430583e-08!GO:0006753;nucleoside phosphate metabolic process;5.4342942430583e-08!GO:0008026;ATP-dependent helicase activity;6.7740482852508e-08!GO:0016072;rRNA metabolic process;7.6905624247974e-08!GO:0030120;vesicle coat;8.43089322677298e-08!GO:0030662;coated vesicle membrane;8.43089322677298e-08!GO:0016881;acid-amino acid ligase activity;8.93370831551756e-08!GO:0006461;protein complex assembly;9.02738347687017e-08!GO:0051188;cofactor biosynthetic process;9.09490174447213e-08!GO:0006099;tricarboxylic acid cycle;1.07124467097224e-07!GO:0046356;acetyl-CoA catabolic process;1.07124467097224e-07!GO:0006366;transcription from RNA polymerase II promoter;1.10580710469108e-07!GO:0006334;nucleosome assembly;1.15705419965142e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.78435446873379e-07!GO:0009117;nucleotide metabolic process;1.8237925282871e-07!GO:0043067;regulation of programmed cell death;2.05592287480552e-07!GO:0050794;regulation of cellular process;2.24598383608496e-07!GO:0042981;regulation of apoptosis;2.58807027396078e-07!GO:0043069;negative regulation of programmed cell death;2.85629141575412e-07!GO:0016787;hydrolase activity;2.87295421130405e-07!GO:0006084;acetyl-CoA metabolic process;3.33489217236509e-07!GO:0051187;cofactor catabolic process;3.41889912846616e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.2452516114052e-07!GO:0046930;pore complex;4.52449782119671e-07!GO:0005770;late endosome;4.63610002692567e-07!GO:0043566;structure-specific DNA binding;5.31426644280088e-07!GO:0031497;chromatin assembly;5.33626281418305e-07!GO:0003697;single-stranded DNA binding;5.63559568254557e-07!GO:0006916;anti-apoptosis;6.187565789606e-07!GO:0050657;nucleic acid transport;6.45834660734146e-07!GO:0051236;establishment of RNA localization;6.45834660734146e-07!GO:0050658;RNA transport;6.45834660734146e-07!GO:0006403;RNA localization;6.45834660734146e-07!GO:0043066;negative regulation of apoptosis;6.50585087152388e-07!GO:0009109;coenzyme catabolic process;7.16831211338877e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.28510999080682e-07!GO:0016853;isomerase activity;7.49379133976703e-07!GO:0044440;endosomal part;7.74430323632317e-07!GO:0010008;endosome membrane;7.74430323632317e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.76854092670519e-07!GO:0005773;vacuole;8.34369250678016e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.29290194349463e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.29290194349463e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.29290194349463e-06!GO:0043038;amino acid activation;1.4428501454057e-06!GO:0006418;tRNA aminoacylation for protein translation;1.4428501454057e-06!GO:0043039;tRNA aminoacylation;1.4428501454057e-06!GO:0048475;coated membrane;1.4614952728572e-06!GO:0030117;membrane coat;1.4614952728572e-06!GO:0005525;GTP binding;1.61996398972287e-06!GO:0000139;Golgi membrane;1.83002863100577e-06!GO:0031252;leading edge;1.83855724466624e-06!GO:0031988;membrane-bound vesicle;1.95358598997623e-06!GO:0045259;proton-transporting ATP synthase complex;1.96197221746495e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.16090328619909e-06!GO:0008654;phospholipid biosynthetic process;2.25081218193599e-06!GO:0000245;spliceosome assembly;2.28128224933999e-06!GO:0009108;coenzyme biosynthetic process;2.67573437573471e-06!GO:0006752;group transfer coenzyme metabolic process;3.54036592698888e-06!GO:0006613;cotranslational protein targeting to membrane;3.55075364607686e-06!GO:0005813;centrosome;3.55584182048731e-06!GO:0000775;chromosome, pericentric region;3.97493796452872e-06!GO:0031324;negative regulation of cellular metabolic process;3.97493796452872e-06!GO:0004298;threonine endopeptidase activity;4.61974819022747e-06!GO:0045786;negative regulation of progression through cell cycle;4.80625038863828e-06!GO:0005667;transcription factor complex;5.61185519943461e-06!GO:0005819;spindle;5.65679284649046e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.750004315949e-06!GO:0005798;Golgi-associated vesicle;5.75201742906727e-06!GO:0016740;transferase activity;6.10188333700001e-06!GO:0007005;mitochondrion organization and biogenesis;6.31271254197406e-06!GO:0005815;microtubule organizing center;6.60722162632543e-06!GO:0051170;nuclear import;6.73474629216639e-06!GO:0000323;lytic vacuole;7.09448314544741e-06!GO:0005764;lysosome;7.09448314544741e-06!GO:0016779;nucleotidyltransferase activity;7.81857418256292e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.2275174725109e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.2275174725109e-06!GO:0006793;phosphorus metabolic process;8.60851247047517e-06!GO:0006796;phosphate metabolic process;8.60851247047517e-06!GO:0016859;cis-trans isomerase activity;8.63866880809269e-06!GO:0031982;vesicle;9.55524191519587e-06!GO:0048522;positive regulation of cellular process;9.9686513921041e-06!GO:0006091;generation of precursor metabolites and energy;1.01339597250548e-05!GO:0006950;response to stress;1.16210416499133e-05!GO:0032561;guanyl ribonucleotide binding;1.20772457059888e-05!GO:0019001;guanyl nucleotide binding;1.20772457059888e-05!GO:0005769;early endosome;1.36193736340682e-05!GO:0032446;protein modification by small protein conjugation;1.39243246835817e-05!GO:0031410;cytoplasmic vesicle;1.4070268103876e-05!GO:0051329;interphase of mitotic cell cycle;1.47747647810092e-05!GO:0009892;negative regulation of metabolic process;1.48775596876455e-05!GO:0006606;protein import into nucleus;1.58004446606968e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.66481512056628e-05!GO:0051028;mRNA transport;1.67868074570737e-05!GO:0016564;transcription repressor activity;1.80527883901271e-05!GO:0016310;phosphorylation;1.95447568139643e-05!GO:0005762;mitochondrial large ribosomal subunit;1.96475738346915e-05!GO:0000315;organellar large ribosomal subunit;1.96475738346915e-05!GO:0007051;spindle organization and biogenesis;2.20987357355752e-05!GO:0007243;protein kinase cascade;2.25934896330814e-05!GO:0003714;transcription corepressor activity;2.26660259478169e-05!GO:0016567;protein ubiquitination;2.3412728946057e-05!GO:0006261;DNA-dependent DNA replication;2.34611011994019e-05!GO:0030867;rough endoplasmic reticulum membrane;2.37978217425653e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.38115622871941e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.40933318096876e-05!GO:0019843;rRNA binding;2.80537803635323e-05!GO:0045454;cell redox homeostasis;3.78596689688905e-05!GO:0051789;response to protein stimulus;3.89513200901869e-05!GO:0006986;response to unfolded protein;3.89513200901869e-05!GO:0006612;protein targeting to membrane;5.66201299823402e-05!GO:0003724;RNA helicase activity;5.81600722147142e-05!GO:0000151;ubiquitin ligase complex;6.11765544089815e-05!GO:0051325;interphase;6.15654878335802e-05!GO:0043623;cellular protein complex assembly;7.32049616367367e-05!GO:0033116;ER-Golgi intermediate compartment membrane;7.70256897707982e-05!GO:0050789;regulation of biological process;7.71636005567823e-05!GO:0007010;cytoskeleton organization and biogenesis;7.75130352353958e-05!GO:0043021;ribonucleoprotein binding;8.48146944313355e-05!GO:0016568;chromatin modification;9.29666839148966e-05!GO:0030133;transport vesicle;9.30102620280502e-05!GO:0005657;replication fork;9.83440063812738e-05!GO:0031968;organelle outer membrane;0.000100262433684103!GO:0019867;outer membrane;0.000115138567605399!GO:0000314;organellar small ribosomal subunit;0.000130947595092245!GO:0005763;mitochondrial small ribosomal subunit;0.000130947595092245!GO:0005048;signal sequence binding;0.000134613213997346!GO:0015980;energy derivation by oxidation of organic compounds;0.000135849497991997!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000141705535005146!GO:0005791;rough endoplasmic reticulum;0.00015789011791997!GO:0005905;coated pit;0.000159555648564191!GO:0051427;hormone receptor binding;0.000164993767665891!GO:0000075;cell cycle checkpoint;0.000170466358727797!GO:0009165;nucleotide biosynthetic process;0.000178802025879225!GO:0046474;glycerophospholipid biosynthetic process;0.000190919675538715!GO:0003713;transcription coactivator activity;0.000193941010129109!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000201392881510391!GO:0008094;DNA-dependent ATPase activity;0.000255507809551419!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000272677019429509!GO:0000786;nucleosome;0.000276049151792368!GO:0004576;oligosaccharyl transferase activity;0.000276200100305214!GO:0030029;actin filament-based process;0.000284488691997031!GO:0003899;DNA-directed RNA polymerase activity;0.000309846407416248!GO:0005885;Arp2/3 protein complex;0.000317494620165663!GO:0000776;kinetochore;0.000332190186125009!GO:0065009;regulation of a molecular function;0.000337113823888385!GO:0035257;nuclear hormone receptor binding;0.000344952571714915!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000352432418111939!GO:0008250;oligosaccharyl transferase complex;0.00036956051756493!GO:0008361;regulation of cell size;0.000372976569101464!GO:0016563;transcription activator activity;0.000391906031503418!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000424283711468057!GO:0006302;double-strand break repair;0.00044720254019129!GO:0005741;mitochondrial outer membrane;0.000467607821401164!GO:0016049;cell growth;0.000491269442745263!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000497760030258635!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000529262142851917!GO:0046467;membrane lipid biosynthetic process;0.000541399107148283!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000556535374199001!GO:0016363;nuclear matrix;0.000562714279200917!GO:0031072;heat shock protein binding;0.000625666750225831!GO:0018196;peptidyl-asparagine modification;0.000639482850558765!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000639482850558765!GO:0019899;enzyme binding;0.000652994605468859!GO:0001558;regulation of cell growth;0.000691309094972813!GO:0016481;negative regulation of transcription;0.000704715384655449!GO:0016126;sterol biosynthetic process;0.000783932450392426!GO:0043681;protein import into mitochondrion;0.000801615303444032!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000805224658353552!GO:0051920;peroxiredoxin activity;0.00086606668755481!GO:0003690;double-stranded DNA binding;0.000925258047176095!GO:0030663;COPI coated vesicle membrane;0.000970994982579392!GO:0030126;COPI vesicle coat;0.000970994982579392!GO:0006626;protein targeting to mitochondrion;0.00107491862934704!GO:0048518;positive regulation of biological process;0.00127220643662469!GO:0048500;signal recognition particle;0.00129323521174761!GO:0008047;enzyme activator activity;0.00131497317865161!GO:0042802;identical protein binding;0.00131823096535674!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00134062969525043!GO:0015399;primary active transmembrane transporter activity;0.00134062969525043!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00147925373811912!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00147925373811912!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00147925373811912!GO:0008092;cytoskeletal protein binding;0.00149585527694036!GO:0015631;tubulin binding;0.00150556217252724!GO:0046489;phosphoinositide biosynthetic process;0.00153172019375344!GO:0008610;lipid biosynthetic process;0.00165649090346454!GO:0030027;lamellipodium;0.00168920461910692!GO:0006414;translational elongation;0.00169944539085938!GO:0051168;nuclear export;0.00179400602453848!GO:0008186;RNA-dependent ATPase activity;0.00184776707461833!GO:0016044;membrane organization and biogenesis;0.00185746460243798!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00191832016383251!GO:0051252;regulation of RNA metabolic process;0.001999801478708!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00204627278717352!GO:0006891;intra-Golgi vesicle-mediated transport;0.00215190325733101!GO:0048487;beta-tubulin binding;0.00218459752709692!GO:0006383;transcription from RNA polymerase III promoter;0.00226662951589588!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00233507777600664!GO:0015992;proton transport;0.00240951706695307!GO:0006818;hydrogen transport;0.00258703571027075!GO:0000059;protein import into nucleus, docking;0.00261894642191169!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00269865349070328!GO:0045047;protein targeting to ER;0.00269865349070328!GO:0051052;regulation of DNA metabolic process;0.0028862988260279!GO:0003684;damaged DNA binding;0.00297599055497983!GO:0030176;integral to endoplasmic reticulum membrane;0.00312076420955003!GO:0008312;7S RNA binding;0.00315259538100495!GO:0030658;transport vesicle membrane;0.00315629942787261!GO:0044262;cellular carbohydrate metabolic process;0.00317010118177752!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00319838195241171!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00348003908751453!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00348003908751453!GO:0030137;COPI-coated vesicle;0.00348003908751453!GO:0005684;U2-dependent spliceosome;0.00353699010825753!GO:0003729;mRNA binding;0.00355441761407331!GO:0007264;small GTPase mediated signal transduction;0.00355471146360416!GO:0007052;mitotic spindle organization and biogenesis;0.00361942391855792!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00380311494930208!GO:0035258;steroid hormone receptor binding;0.00385734680707699!GO:0008283;cell proliferation;0.00396292468585661!GO:0000082;G1/S transition of mitotic cell cycle;0.0040762537950781!GO:0016197;endosome transport;0.00423167865206389!GO:0030132;clathrin coat of coated pit;0.00424596265468344!GO:0044452;nucleolar part;0.0043640725238096!GO:0007050;cell cycle arrest;0.00449805869207744!GO:0043284;biopolymer biosynthetic process;0.00450854963995397!GO:0004004;ATP-dependent RNA helicase activity;0.00454076228992482!GO:0008139;nuclear localization sequence binding;0.00478749439198699!GO:0008180;signalosome;0.00483803211092634!GO:0003678;DNA helicase activity;0.00489695121230272!GO:0007093;mitotic cell cycle checkpoint;0.00521652115188172!GO:0030880;RNA polymerase complex;0.00527452733532339!GO:0006509;membrane protein ectodomain proteolysis;0.0052788888790308!GO:0033619;membrane protein proteolysis;0.0052788888790308!GO:0022890;inorganic cation transmembrane transporter activity;0.00537809021050199!GO:0046519;sphingoid metabolic process;0.00557933336666567!GO:0008033;tRNA processing;0.00565898076111879!GO:0030521;androgen receptor signaling pathway;0.0057982480177853!GO:0007088;regulation of mitosis;0.0057982480177853!GO:0008154;actin polymerization and/or depolymerization;0.00585194753808916!GO:0007006;mitochondrial membrane organization and biogenesis;0.00598723816651165!GO:0007059;chromosome segregation;0.00602573311221252!GO:0030134;ER to Golgi transport vesicle;0.0062292167326035!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00670287947287169!GO:0030660;Golgi-associated vesicle membrane;0.00688485218497777!GO:0050790;regulation of catalytic activity;0.00698926545837334!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00699705434735799!GO:0009967;positive regulation of signal transduction;0.0070490619963752!GO:0030041;actin filament polymerization;0.00713384557391902!GO:0031902;late endosome membrane;0.00724167587580834!GO:0031901;early endosome membrane;0.00742759259712391!GO:0048471;perinuclear region of cytoplasm;0.00742759259712391!GO:0001726;ruffle;0.00746301866443637!GO:0005874;microtubule;0.00750121255419879!GO:0065007;biological regulation;0.00752212246067843!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00755785913437781!GO:0005774;vacuolar membrane;0.00774286779172055!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00774286779172055!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00774286779172055!GO:0016272;prefoldin complex;0.007920589678337!GO:0008632;apoptotic program;0.00807958469743423!GO:0051087;chaperone binding;0.00819735938586236!GO:0006595;polyamine metabolic process;0.00848841202870935!GO:0005869;dynactin complex;0.00853122841440913!GO:0003711;transcription elongation regulator activity;0.00855369518745033!GO:0006275;regulation of DNA replication;0.00859313742070848!GO:0030127;COPII vesicle coat;0.00868164119251664!GO:0012507;ER to Golgi transport vesicle membrane;0.00868164119251664!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00890047012821508!GO:0043492;ATPase activity, coupled to movement of substances;0.00892135052519056!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00908318970158771!GO:0015002;heme-copper terminal oxidase activity;0.00908318970158771!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00908318970158771!GO:0004129;cytochrome-c oxidase activity;0.00908318970158771!GO:0006650;glycerophospholipid metabolic process;0.00944156067187714!GO:0006839;mitochondrial transport;0.00950722445848686!GO:0051540;metal cluster binding;0.00959099825851575!GO:0051536;iron-sulfur cluster binding;0.00959099825851575!GO:0000339;RNA cap binding;0.00967003820509896!GO:0016860;intramolecular oxidoreductase activity;0.00989273194697961!GO:0007034;vacuolar transport;0.00990451419196196!GO:0017166;vinculin binding;0.00999513560456842!GO:0006672;ceramide metabolic process;0.00999620015120998!GO:0033673;negative regulation of kinase activity;0.0100763593362939!GO:0006469;negative regulation of protein kinase activity;0.0100763593362939!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0102315331324007!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0106367572049891!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0108153179677494!GO:0000428;DNA-directed RNA polymerase complex;0.0108153179677494!GO:0005862;muscle thin filament tropomyosin;0.0109354044097527!GO:0006497;protein amino acid lipidation;0.0112080710306214!GO:0030518;steroid hormone receptor signaling pathway;0.0112683521500434!GO:0006695;cholesterol biosynthetic process;0.0112683521500434!GO:0043488;regulation of mRNA stability;0.0112683521500434!GO:0043487;regulation of RNA stability;0.0112683521500434!GO:0008022;protein C-terminus binding;0.0115596597297913!GO:0006979;response to oxidative stress;0.0116991390073367!GO:0051270;regulation of cell motility;0.0117311159331686!GO:0046483;heterocycle metabolic process;0.0117673175373087!GO:0043022;ribosome binding;0.0118225230278325!GO:0030118;clathrin coat;0.0118673409002169!GO:0006118;electron transport;0.01207790766451!GO:0007040;lysosome organization and biogenesis;0.0121360310879602!GO:0003682;chromatin binding;0.0121596748362564!GO:0045045;secretory pathway;0.0123728842944319!GO:0048144;fibroblast proliferation;0.0124778727609897!GO:0048145;regulation of fibroblast proliferation;0.0124778727609897!GO:0005832;chaperonin-containing T-complex;0.012491670726495!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0125954966837634!GO:0005138;interleukin-6 receptor binding;0.0127008008777094!GO:0003746;translation elongation factor activity;0.0129030721652052!GO:0048468;cell development;0.0129823756483065!GO:0008243;plasminogen activator activity;0.0131599977483062!GO:0005637;nuclear inner membrane;0.0133822331210017!GO:0050681;androgen receptor binding;0.0135645251071855!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0135714184578079!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0135830551597481!GO:0005096;GTPase activator activity;0.0139340978132665!GO:0051348;negative regulation of transferase activity;0.0139842280433181!GO:0030659;cytoplasmic vesicle membrane;0.0140774838479031!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0141494097772989!GO:0051128;regulation of cellular component organization and biogenesis;0.0141680473854473!GO:0006352;transcription initiation;0.0146669632736872!GO:0006310;DNA recombination;0.0146935515046868!GO:0006401;RNA catabolic process;0.0151992554684711!GO:0051539;4 iron, 4 sulfur cluster binding;0.0152320002061298!GO:0019222;regulation of metabolic process;0.0155647174278955!GO:0030125;clathrin vesicle coat;0.0155711152644401!GO:0030665;clathrin coated vesicle membrane;0.0155711152644401!GO:0040008;regulation of growth;0.0156338458822781!GO:0032508;DNA duplex unwinding;0.0160062563480303!GO:0032392;DNA geometric change;0.0160062563480303!GO:0004177;aminopeptidase activity;0.0162718579735899!GO:0031418;L-ascorbic acid binding;0.0162718579735899!GO:0006402;mRNA catabolic process;0.0168312462208124!GO:0006506;GPI anchor biosynthetic process;0.0170150366282984!GO:0032984;macromolecular complex disassembly;0.0174442753570892!GO:0048146;positive regulation of fibroblast proliferation;0.0176976497240388!GO:0030833;regulation of actin filament polymerization;0.0176976497240388!GO:0006611;protein export from nucleus;0.0176976497240388!GO:0044437;vacuolar part;0.0181060990531314!GO:0045941;positive regulation of transcription;0.018299185510849!GO:0031124;mRNA 3'-end processing;0.0184347556351632!GO:0000910;cytokinesis;0.018480606514037!GO:0050662;coenzyme binding;0.018480606514037!GO:0016408;C-acyltransferase activity;0.0188048472707628!GO:0004527;exonuclease activity;0.0188253052876388!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0190144245102165!GO:0009116;nucleoside metabolic process;0.0194220132444666!GO:0006417;regulation of translation;0.0194864895843018!GO:0045893;positive regulation of transcription, DNA-dependent;0.0200880613664346!GO:0006505;GPI anchor metabolic process;0.0202655625488681!GO:0045892;negative regulation of transcription, DNA-dependent;0.0202655625488681!GO:0000792;heterochromatin;0.0203469561801505!GO:0006289;nucleotide-excision repair;0.0214872587318256!GO:0019752;carboxylic acid metabolic process;0.0214967227920823!GO:0008064;regulation of actin polymerization and/or depolymerization;0.021744150667855!GO:0003756;protein disulfide isomerase activity;0.0219363939387275!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0219363939387275!GO:0005765;lysosomal membrane;0.0223291556788769!GO:0030433;ER-associated protein catabolic process;0.022499456929151!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.022499456929151!GO:0007033;vacuole organization and biogenesis;0.0226251484592513!GO:0006082;organic acid metabolic process;0.0232787322092792!GO:0006268;DNA unwinding during replication;0.0241143660754911!GO:0043065;positive regulation of apoptosis;0.0241143660754911!GO:0006778;porphyrin metabolic process;0.024377498793561!GO:0033013;tetrapyrrole metabolic process;0.024377498793561!GO:0031529;ruffle organization and biogenesis;0.0244328704605036!GO:0004287;prolyl oligopeptidase activity;0.0244689220695913!GO:0009112;nucleobase metabolic process;0.0246252527217917!GO:0005876;spindle microtubule;0.024968729008392!GO:0016584;nucleosome positioning;0.0250442557963288!GO:0008234;cysteine-type peptidase activity;0.025519657725364!GO:0022408;negative regulation of cell-cell adhesion;0.025590679014406!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0257574653455937!GO:0044433;cytoplasmic vesicle part;0.0259189462326248!GO:0006892;post-Golgi vesicle-mediated transport;0.0262517769530799!GO:0004003;ATP-dependent DNA helicase activity;0.0263800508409865!GO:0000096;sulfur amino acid metabolic process;0.0265245184319945!GO:0050811;GABA receptor binding;0.027393224037646!GO:0016251;general RNA polymerase II transcription factor activity;0.0275169323654471!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.028037831420658!GO:0033043;regulation of organelle organization and biogenesis;0.028037831420658!GO:0000049;tRNA binding;0.028066116449537!GO:0042168;heme metabolic process;0.0280860877994587!GO:0043068;positive regulation of programmed cell death;0.0286000361308567!GO:0009889;regulation of biosynthetic process;0.0286000361308567!GO:0042158;lipoprotein biosynthetic process;0.0286389591307247!GO:0043241;protein complex disassembly;0.0287084021759444!GO:0043596;nuclear replication fork;0.0287084021759444!GO:0043086;negative regulation of catalytic activity;0.0287084021759444!GO:0006607;NLS-bearing substrate import into nucleus;0.0289868482495713!GO:0007346;regulation of progression through mitotic cell cycle;0.0292999280400855!GO:0031625;ubiquitin protein ligase binding;0.0299236192899497!GO:0006144;purine base metabolic process;0.0299236192899497!GO:0004674;protein serine/threonine kinase activity;0.0299236192899497!GO:0031371;ubiquitin conjugating enzyme complex;0.0299333092420214!GO:0008538;proteasome activator activity;0.0309243189879789!GO:0007021;tubulin folding;0.0309671212411565!GO:0030508;thiol-disulfide exchange intermediate activity;0.0309920471701084!GO:0006740;NADPH regeneration;0.0310939437206143!GO:0006098;pentose-phosphate shunt;0.0310939437206143!GO:0006693;prostaglandin metabolic process;0.031153211030391!GO:0006692;prostanoid metabolic process;0.031153211030391!GO:0051101;regulation of DNA binding;0.0312330831874502!GO:0000922;spindle pole;0.0314913910778666!GO:0048660;regulation of smooth muscle cell proliferation;0.0317191721480351!GO:0006284;base-excision repair;0.0320233585214205!GO:0008147;structural constituent of bone;0.0333590170491043!GO:0006643;membrane lipid metabolic process;0.0336473832708686!GO:0005758;mitochondrial intermembrane space;0.033711065326857!GO:0051271;negative regulation of cell motility;0.0337908603794176!GO:0030384;phosphoinositide metabolic process;0.034220986935339!GO:0007041;lysosomal transport;0.0344898795727221!GO:0045792;negative regulation of cell size;0.0350354118903182!GO:0005092;GDP-dissociation inhibitor activity;0.0352761945378739!GO:0008168;methyltransferase activity;0.035279183220803!GO:0006376;mRNA splice site selection;0.035601720171486!GO:0000389;nuclear mRNA 3'-splice site recognition;0.035601720171486!GO:0004228;gelatinase A activity;0.035601720171486!GO:0001955;blood vessel maturation;0.035601720171486!GO:0006749;glutathione metabolic process;0.0357517617212148!GO:0051338;regulation of transferase activity;0.0358315336265098!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0358315336265098!GO:0005784;translocon complex;0.0358927290082606!GO:0031326;regulation of cellular biosynthetic process;0.0366678301777119!GO:0043130;ubiquitin binding;0.0366678301777119!GO:0032182;small conjugating protein binding;0.0366678301777119!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0369336871922093!GO:0030119;AP-type membrane coat adaptor complex;0.0369433612491057!GO:0012506;vesicle membrane;0.0371638151645107!GO:0006220;pyrimidine nucleotide metabolic process;0.0373373580495768!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0375813328030204!GO:0047485;protein N-terminus binding;0.0380961417248081!GO:0030145;manganese ion binding;0.0381056412323912!GO:0000287;magnesium ion binding;0.0381056412323912!GO:0000209;protein polyubiquitination;0.0381056412323912!GO:0005801;cis-Golgi network;0.038312524685928!GO:0006354;RNA elongation;0.038551630609768!GO:0030911;TPR domain binding;0.0385838552906004!GO:0030522;intracellular receptor-mediated signaling pathway;0.0386525839272435!GO:0032940;secretion by cell;0.0388939787387143!GO:0030308;negative regulation of cell growth;0.0391156758721022!GO:0031301;integral to organelle membrane;0.0392313101695623!GO:0019206;nucleoside kinase activity;0.0392848858607082!GO:0033559;unsaturated fatty acid metabolic process;0.0393004898039733!GO:0006636;unsaturated fatty acid biosynthetic process;0.0393004898039733!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0393743611115964!GO:0040011;locomotion;0.0393743611115964!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0396751820562421!GO:0006984;ER-nuclear signaling pathway;0.039826153910937!GO:0045936;negative regulation of phosphate metabolic process;0.0398547044931077!GO:0030032;lamellipodium biogenesis;0.0398547044931077!GO:0007017;microtubule-based process;0.0398547044931077!GO:0006635;fatty acid beta-oxidation;0.039986931363463!GO:0043624;cellular protein complex disassembly;0.039986931363463!GO:0035035;histone acetyltransferase binding;0.039986931363463!GO:0019798;procollagen-proline dioxygenase activity;0.0403547289242528!GO:0007030;Golgi organization and biogenesis;0.0412042960023815!GO:0004518;nuclease activity;0.0412042960023815!GO:0008408;3'-5' exonuclease activity;0.0418785924214301!GO:0031543;peptidyl-proline dioxygenase activity;0.0419043960693731!GO:0004532;exoribonuclease activity;0.0419043960693731!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0419043960693731!GO:0016741;transferase activity, transferring one-carbon groups;0.0422122430809175!GO:0006007;glucose catabolic process;0.0425212066509581!GO:0022415;viral reproductive process;0.0429095592271341!GO:0006378;mRNA polyadenylation;0.0431229024314756!GO:0030149;sphingolipid catabolic process;0.0432503336540192!GO:0009124;nucleoside monophosphate biosynthetic process;0.0437504978689756!GO:0009123;nucleoside monophosphate metabolic process;0.0437504978689756!GO:0043407;negative regulation of MAP kinase activity;0.0437504978689756!GO:0007162;negative regulation of cell adhesion;0.0439377645396901!GO:0031123;RNA 3'-end processing;0.0444702838783333!GO:0046426;negative regulation of JAK-STAT cascade;0.0445092256525475!GO:0006897;endocytosis;0.0445186973189554!GO:0010324;membrane invagination;0.0445186973189554!GO:0004448;isocitrate dehydrogenase activity;0.044543176555818!GO:0051287;NAD binding;0.0445934837281288!GO:0043433;negative regulation of transcription factor activity;0.0447791155202578!GO:0001666;response to hypoxia;0.0448286856517639!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0448583382985778!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0453850836659418!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0456825684995146!GO:0000030;mannosyltransferase activity;0.0461403963870055!GO:0009225;nucleotide-sugar metabolic process;0.0461787437370794!GO:0051059;NF-kappaB binding;0.0465164149499636!GO:0051272;positive regulation of cell motility;0.0465643209220739!GO:0040017;positive regulation of locomotion;0.0465643209220739!GO:0032200;telomere organization and biogenesis;0.0470312797391868!GO:0000723;telomere maintenance;0.0470312797391868!GO:0030496;midbody;0.0472406456128763!GO:0008637;apoptotic mitochondrial changes;0.0477436732637669!GO:0008383;manganese superoxide dismutase activity;0.0483521717625076!GO:0001315;age-dependent response to reactive oxygen species;0.0483521717625076!GO:0001953;negative regulation of cell-matrix adhesion;0.0486804966173229!GO:0040012;regulation of locomotion;0.0488679604289406!GO:0006405;RNA export from nucleus;0.0491200836351127!GO:0007242;intracellular signaling cascade;0.049406980018111!GO:0007004;telomere maintenance via telomerase;0.0494758902486099 | |||
|sample_id=11755 | |sample_id=11755 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=heart | |sample_tissue=heart | ||
|top_motifs=ALX4:2.13818664533;HSF1,2:1.78439012774;EN1,2:1.7317158995;ALX1:1.46088461204;PAX1,9:1.40805421827;NKX3-1:1.36027109366;ZNF238:1.21407079847;FOX{I1,J2}:1.16169432168;POU3F1..4:1.13776454604;CDC5L:1.12746615123;NFATC1..3:1.019540064;EVI1:0.978100350101;HOX{A5,B5}:0.95841886933;IKZF1:0.89231523527;TAL1_TCF{3,4,12}:0.890728206572;MYBL2:0.866980484848;CRX:0.847343350179;HMX1:0.826431231141;UFEwm:0.807957072075;HOX{A4,D4}:0.800296039158;KLF4:0.755131765736;GATA4:0.751440215525;FOXL1:0.737807660522;NFE2L2:0.734140198048;ONECUT1,2:0.732579186814;NKX2-2,8:0.731430313449;ZNF384:0.691279491274;TBP:0.64107942101;NR3C1:0.616474993737;XBP1:0.613627163297;HBP1_HMGB_SSRP1_UBTF:0.566936746775;AIRE:0.558014313021;ELK1,4_GABP{A,B1}:0.554567070714;ARID5B:0.536462958989;PBX1:0.532961149169;NFIX:0.530471620363;ATF6:0.51246896263;TLX2:0.50899135929;FOS_FOS{B,L1}_JUN{B,D}:0.496895549155;CDX1,2,4:0.489598741137;BACH2:0.48774682989;JUN:0.480974381619;E2F1..5:0.476272153714;PAX8:0.471344610646;XCPE1{core}:0.464396865756;HLF:0.447640291165;GTF2A1,2:0.446263835312;EBF1:0.441174160801;TLX1..3_NFIC{dimer}:0.429997214551;MYB:0.416708643052;GFI1B:0.41175604599;TEAD1:0.411651970633;ZBTB6:0.411138140072;TFDP1:0.397267424829;NANOG{mouse}:0.394931895227;TBX4,5:0.385855193146;MAFB:0.366450060677;NKX2-1,4:0.356786245645;FOXM1:0.350266761768;PRDM1:0.348070936529;SMAD1..7,9:0.34347692631;HMGA1,2:0.333261315264;GFI1:0.327933470692;DBP:0.320350312792;PAX5:0.310907402949;POU1F1:0.286239916733;NFE2L1:0.282720188674;POU5F1:0.282640892197;SRF:0.273128384677;ZIC1..3:0.271709547507;bHLH_family:0.241981826923;RXR{A,B,G}:0.230770882944;ESRRA:0.226404833822;GTF2I:0.198498537144;TP53:0.196751028373;FOSL2:0.188696284463;GZF1:0.176547893364;NKX3-2:0.176198369581;LHX3,4:0.175902045098;PAX3,7:0.167561139133;SOX{8,9,10}:0.164356757609;BPTF:0.162760628913;HIF1A:0.157609256324;HES1:0.153841006517;ELF1,2,4:0.146029093673;ZBTB16:0.129161858991;RFX1:0.126627356771;NFE2:0.123320130775;ZNF143:0.119738051123;NRF1:0.114479495792;FOXP3:0.111947220141;PAX4:0.101828173547;MEF2{A,B,C,D}:0.0997639157801;STAT2,4,6:0.0934247251217;GCM1,2:0.0698112746331;HNF1A:0.0604592445145;POU2F1..3:0.054778994567;NFKB1_REL_RELA:0.0303945114617;HAND1,2:0.0149862929403;ATF2:0.0146074967456;TFCP2:0.00689615653057;MAZ:0.00457037063156;MZF1:0.0028612078253;CREB1:-0.0176822507205;SOX17:-0.0307773137429;PAX2:-0.0319758068462;PRRX1,2:-0.0330708335459;CEBPA,B_DDIT3:-0.0395099439466;MTE{core}:-0.0406489211448;TFAP2B:-0.0411051903432;GLI1..3:-0.0588597399139;TFAP4:-0.065371436196;RUNX1..3:-0.0741023159523;LEF1_TCF7_TCF7L1,2:-0.0824070781557;AHR_ARNT_ARNT2:-0.108747040238;SPZ1:-0.112427939504;SOX2:-0.11487957306;NHLH1,2:-0.123700922691;SOX5:-0.131949397453;ATF5_CREB3:-0.132139651022;TEF:-0.137924131817;PPARG:-0.142208531794;ESR1:-0.153527985496;IKZF2:-0.162295949664;POU6F1:-0.17855981371;AR:-0.186998157916;ZFP161:-0.19101757969;YY1:-0.209449767254;NFIL3:-0.211592170227;MYFfamily:-0.216140576507;NFY{A,B,C}:-0.226085635541;ETS1,2:-0.226430252947;IRF1,2:-0.22754891315;STAT1,3:-0.231392299623;SPI1:-0.234502479662;SREBF1,2:-0.23948937801;PATZ1:-0.269321184266;MED-1{core}:-0.273295725352;REST:-0.276914725122;RXRA_VDR{dimer}:-0.285769478919;RBPJ:-0.296368779065;MTF1:-0.302061142239;ZNF148:-0.317876208317;TGIF1:-0.329976546136;HIC1:-0.330158956618;GATA6:-0.336888469448;SPIB:-0.35200723147;PAX6:-0.3646995377;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.375155482098;HNF4A_NR2F1,2:-0.385458137775;NKX6-1,2:-0.387331748234;FOXD3:-0.3936973497;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.399994218916;HOXA9_MEIS1:-0.410201204013;TFAP2{A,C}:-0.424788890466;NR6A1:-0.425671935216;LMO2:-0.428368558363;DMAP1_NCOR{1,2}_SMARC:-0.431055280721;ZNF423:-0.434214227504;NR1H4:-0.436938495163;RFX2..5_RFXANK_RFXAP:-0.451972590811;EGR1..3:-0.472131896146;FOXN1:-0.476278711915;IRF7:-0.476480772735;FOXQ1:-0.490518138374;ATF4:-0.497914513195;SP1:-0.556266706624;FOXP1:-0.583108450343;CUX2:-0.605607082932;EP300:-0.633093707319;PDX1:-0.63613931936;NR5A1,2:-0.657002308484;NKX2-3_NKX2-5:-0.682350904411;STAT5{A,B}:-0.692860670799;TOPORS:-0.756249324717;ADNP_IRX_SIX_ZHX:-0.763693358502;FOX{D1,D2}:-0.795490037159;VSX1,2:-0.801447298692;HOX{A6,A7,B6,B7}:-0.806352628265;FOXO1,3,4:-0.82280862049;OCT4_SOX2{dimer}:-0.830191343323;FOX{F1,F2,J1}:-0.8313683296;SNAI1..3:-0.838717729781;RREB1:-0.846275301286;BREu{core}:-0.867810044703;RORA:-0.886526481813;ZEB1:-0.890330955769;NANOG:-0.898304096963;FOXA2:-1.00789945651;MYOD1:-1.1376008977;PITX1..3:-1.20622601927;T:-1.52124557986 | |top_motifs=ALX4:2.13818664533;HSF1,2:1.78439012774;EN1,2:1.7317158995;ALX1:1.46088461204;PAX1,9:1.40805421827;NKX3-1:1.36027109366;ZNF238:1.21407079847;FOX{I1,J2}:1.16169432168;POU3F1..4:1.13776454604;CDC5L:1.12746615123;NFATC1..3:1.019540064;EVI1:0.978100350101;HOX{A5,B5}:0.95841886933;IKZF1:0.89231523527;TAL1_TCF{3,4,12}:0.890728206572;MYBL2:0.866980484848;CRX:0.847343350179;HMX1:0.826431231141;UFEwm:0.807957072075;HOX{A4,D4}:0.800296039158;KLF4:0.755131765736;GATA4:0.751440215525;FOXL1:0.737807660522;NFE2L2:0.734140198048;ONECUT1,2:0.732579186814;NKX2-2,8:0.731430313449;ZNF384:0.691279491274;TBP:0.64107942101;NR3C1:0.616474993737;XBP1:0.613627163297;HBP1_HMGB_SSRP1_UBTF:0.566936746775;AIRE:0.558014313021;ELK1,4_GABP{A,B1}:0.554567070714;ARID5B:0.536462958989;PBX1:0.532961149169;NFIX:0.530471620363;ATF6:0.51246896263;TLX2:0.50899135929;FOS_FOS{B,L1}_JUN{B,D}:0.496895549155;CDX1,2,4:0.489598741137;BACH2:0.48774682989;JUN:0.480974381619;E2F1..5:0.476272153714;PAX8:0.471344610646;XCPE1{core}:0.464396865756;HLF:0.447640291165;GTF2A1,2:0.446263835312;EBF1:0.441174160801;TLX1..3_NFIC{dimer}:0.429997214551;MYB:0.416708643052;GFI1B:0.41175604599;TEAD1:0.411651970633;ZBTB6:0.411138140072;TFDP1:0.397267424829;NANOG{mouse}:0.394931895227;TBX4,5:0.385855193146;MAFB:0.366450060677;NKX2-1,4:0.356786245645;FOXM1:0.350266761768;PRDM1:0.348070936529;SMAD1..7,9:0.34347692631;HMGA1,2:0.333261315264;GFI1:0.327933470692;DBP:0.320350312792;PAX5:0.310907402949;POU1F1:0.286239916733;NFE2L1:0.282720188674;POU5F1:0.282640892197;SRF:0.273128384677;ZIC1..3:0.271709547507;bHLH_family:0.241981826923;RXR{A,B,G}:0.230770882944;ESRRA:0.226404833822;GTF2I:0.198498537144;TP53:0.196751028373;FOSL2:0.188696284463;GZF1:0.176547893364;NKX3-2:0.176198369581;LHX3,4:0.175902045098;PAX3,7:0.167561139133;SOX{8,9,10}:0.164356757609;BPTF:0.162760628913;HIF1A:0.157609256324;HES1:0.153841006517;ELF1,2,4:0.146029093673;ZBTB16:0.129161858991;RFX1:0.126627356771;NFE2:0.123320130775;ZNF143:0.119738051123;NRF1:0.114479495792;FOXP3:0.111947220141;PAX4:0.101828173547;MEF2{A,B,C,D}:0.0997639157801;STAT2,4,6:0.0934247251217;GCM1,2:0.0698112746331;HNF1A:0.0604592445145;POU2F1..3:0.054778994567;NFKB1_REL_RELA:0.0303945114617;HAND1,2:0.0149862929403;ATF2:0.0146074967456;TFCP2:0.00689615653057;MAZ:0.00457037063156;MZF1:0.0028612078253;CREB1:-0.0176822507205;SOX17:-0.0307773137429;PAX2:-0.0319758068462;PRRX1,2:-0.0330708335459;CEBPA,B_DDIT3:-0.0395099439466;MTE{core}:-0.0406489211448;TFAP2B:-0.0411051903432;GLI1..3:-0.0588597399139;TFAP4:-0.065371436196;RUNX1..3:-0.0741023159523;LEF1_TCF7_TCF7L1,2:-0.0824070781557;AHR_ARNT_ARNT2:-0.108747040238;SPZ1:-0.112427939504;SOX2:-0.11487957306;NHLH1,2:-0.123700922691;SOX5:-0.131949397453;ATF5_CREB3:-0.132139651022;TEF:-0.137924131817;PPARG:-0.142208531794;ESR1:-0.153527985496;IKZF2:-0.162295949664;POU6F1:-0.17855981371;AR:-0.186998157916;ZFP161:-0.19101757969;YY1:-0.209449767254;NFIL3:-0.211592170227;MYFfamily:-0.216140576507;NFY{A,B,C}:-0.226085635541;ETS1,2:-0.226430252947;IRF1,2:-0.22754891315;STAT1,3:-0.231392299623;SPI1:-0.234502479662;SREBF1,2:-0.23948937801;PATZ1:-0.269321184266;MED-1{core}:-0.273295725352;REST:-0.276914725122;RXRA_VDR{dimer}:-0.285769478919;RBPJ:-0.296368779065;MTF1:-0.302061142239;ZNF148:-0.317876208317;TGIF1:-0.329976546136;HIC1:-0.330158956618;GATA6:-0.336888469448;SPIB:-0.35200723147;PAX6:-0.3646995377;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.375155482098;HNF4A_NR2F1,2:-0.385458137775;NKX6-1,2:-0.387331748234;FOXD3:-0.3936973497;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.399994218916;HOXA9_MEIS1:-0.410201204013;TFAP2{A,C}:-0.424788890466;NR6A1:-0.425671935216;LMO2:-0.428368558363;DMAP1_NCOR{1,2}_SMARC:-0.431055280721;ZNF423:-0.434214227504;NR1H4:-0.436938495163;RFX2..5_RFXANK_RFXAP:-0.451972590811;EGR1..3:-0.472131896146;FOXN1:-0.476278711915;IRF7:-0.476480772735;FOXQ1:-0.490518138374;ATF4:-0.497914513195;SP1:-0.556266706624;FOXP1:-0.583108450343;CUX2:-0.605607082932;EP300:-0.633093707319;PDX1:-0.63613931936;NR5A1,2:-0.657002308484;NKX2-3_NKX2-5:-0.682350904411;STAT5{A,B}:-0.692860670799;TOPORS:-0.756249324717;ADNP_IRX_SIX_ZHX:-0.763693358502;FOX{D1,D2}:-0.795490037159;VSX1,2:-0.801447298692;HOX{A6,A7,B6,B7}:-0.806352628265;FOXO1,3,4:-0.82280862049;OCT4_SOX2{dimer}:-0.830191343323;FOX{F1,F2,J1}:-0.8313683296;SNAI1..3:-0.838717729781;RREB1:-0.846275301286;BREu{core}:-0.867810044703;RORA:-0.886526481813;ZEB1:-0.890330955769;NANOG:-0.898304096963;FOXA2:-1.00789945651;MYOD1:-1.1376008977;PITX1..3:-1.20622601927;T:-1.52124557986 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11755-123G9;search_select_hide=table117:FF:11755-123G9 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - cardiac, donor4 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12371 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12371
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12371
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.754 |
| 10 | 10 | 0.246 |
| 100 | 100 | 0.763 |
| 101 | 101 | 0.501 |
| 102 | 102 | 0.445 |
| 103 | 103 | 0.121 |
| 104 | 104 | 0.898 |
| 105 | 105 | 0.153 |
| 106 | 106 | 0.769 |
| 107 | 107 | 0.361 |
| 108 | 108 | 0.405 |
| 109 | 109 | 0.637 |
| 11 | 11 | 0.651 |
| 110 | 110 | 0.15 |
| 111 | 111 | 0.196 |
| 112 | 112 | 0.879 |
| 113 | 113 | 0.00394 |
| 114 | 114 | 0.768 |
| 115 | 115 | 0.444 |
| 116 | 116 | 0.0705 |
| 117 | 117 | 0.336 |
| 118 | 118 | 0.471 |
| 119 | 119 | 0.956 |
| 12 | 12 | 0.583 |
| 120 | 120 | 0.133 |
| 121 | 121 | 0.924 |
| 122 | 122 | 0.354 |
| 123 | 123 | 1.3611e-4 |
| 124 | 124 | 0.0635 |
| 125 | 125 | 0.287 |
| 126 | 126 | 0.55 |
| 127 | 127 | 0.616 |
| 128 | 128 | 0.945 |
| 129 | 129 | 0.328 |
| 13 | 13 | 0.49 |
| 130 | 130 | 0.208 |
| 131 | 131 | 0.0696 |
| 132 | 132 | 0.705 |
| 133 | 133 | 0.632 |
| 134 | 134 | 0.438 |
| 135 | 135 | 0.45 |
| 136 | 136 | 0.766 |
| 137 | 137 | 0.985 |
| 138 | 138 | 0.952 |
| 139 | 139 | 0.297 |
| 14 | 14 | 0.2 |
| 140 | 140 | 0.92 |
| 141 | 141 | 0.92 |
| 142 | 142 | 0.435 |
| 143 | 143 | 0.191 |
| 144 | 144 | 0.463 |
| 145 | 145 | 0.761 |
| 146 | 146 | 0.763 |
| 147 | 147 | 0.0633 |
| 148 | 148 | 0.483 |
| 149 | 149 | 0.83 |
| 15 | 15 | 0.643 |
| 150 | 150 | 0.0125 |
| 151 | 151 | 0.154 |
| 152 | 152 | 0.453 |
| 153 | 153 | 0.479 |
| 154 | 154 | 0.503 |
| 155 | 155 | 0.00586 |
| 156 | 156 | 0.345 |
| 157 | 157 | 0.461 |
| 158 | 158 | 0.0117 |
| 159 | 159 | 0.0689 |
| 16 | 16 | 0.187 |
| 160 | 160 | 0.797 |
| 161 | 161 | 0.0295 |
| 162 | 162 | 0.495 |
| 163 | 163 | 0.289 |
| 164 | 164 | 0.094 |
| 165 | 165 | 0.61 |
| 166 | 166 | 0.324 |
| 167 | 167 | 0.532 |
| 168 | 168 | 0.434 |
| 169 | 169 | 0.418 |
| 17 | 17 | 0.912 |
| 18 | 18 | 0.119 |
| 19 | 19 | 0.284 |
| 2 | 2 | 0.958 |
| 20 | 20 | 0.844 |
| 21 | 21 | 0.943 |
| 22 | 22 | 0.987 |
| 23 | 23 | 0.211 |
| 24 | 24 | 0.498 |
| 25 | 25 | 0.159 |
| 26 | 26 | 0.47 |
| 27 | 27 | 0.463 |
| 28 | 28 | 0.483 |
| 29 | 29 | 0.0615 |
| 3 | 3 | 0.477 |
| 30 | 30 | 0.963 |
| 31 | 31 | 0.788 |
| 32 | 32 | 0.0018 |
| 33 | 33 | 0.273 |
| 34 | 34 | 0.649 |
| 35 | 35 | 0.625 |
| 36 | 36 | 0.492 |
| 37 | 37 | 0.11 |
| 38 | 38 | 0.438 |
| 39 | 39 | 0.311 |
| 4 | 4 | 0.271 |
| 40 | 40 | 0.33 |
| 41 | 41 | 0.923 |
| 42 | 42 | 0.972 |
| 43 | 43 | 0.677 |
| 44 | 44 | 0.505 |
| 45 | 45 | 0.574 |
| 46 | 46 | 0.547 |
| 47 | 47 | 0.94 |
| 48 | 48 | 0.707 |
| 49 | 49 | 0.0385 |
| 5 | 5 | 0.854 |
| 50 | 50 | 0.841 |
| 51 | 51 | 0.707 |
| 52 | 52 | 0.411 |
| 53 | 53 | 0.0162 |
| 54 | 54 | 0.753 |
| 55 | 55 | 0.389 |
| 56 | 56 | 0.207 |
| 57 | 57 | 0.974 |
| 58 | 58 | 0.17 |
| 59 | 59 | 0.96 |
| 6 | 6 | 0.289 |
| 60 | 60 | 0.576 |
| 61 | 61 | 0.474 |
| 62 | 62 | 0.559 |
| 63 | 63 | 0.996 |
| 64 | 64 | 0.533 |
| 65 | 65 | 0.991 |
| 66 | 66 | 0.643 |
| 67 | 67 | 0.609 |
| 68 | 68 | 0.766 |
| 69 | 69 | 0.352 |
| 7 | 7 | 0.321 |
| 70 | 70 | 0.138 |
| 71 | 71 | 0.591 |
| 72 | 72 | 0.95 |
| 73 | 73 | 0.0689 |
| 74 | 74 | 0.124 |
| 75 | 75 | 0.644 |
| 76 | 76 | 0.235 |
| 77 | 77 | 0.102 |
| 78 | 78 | 0.154 |
| 79 | 79 | 0.164 |
| 8 | 8 | 0.449 |
| 80 | 80 | 0.606 |
| 81 | 81 | 0.975 |
| 82 | 82 | 0.0932 |
| 83 | 83 | 0.891 |
| 84 | 84 | 0.787 |
| 85 | 85 | 0.435 |
| 86 | 86 | 0.351 |
| 87 | 87 | 0.0267 |
| 88 | 88 | 0.556 |
| 89 | 89 | 0.0684 |
| 9 | 9 | 0.612 |
| 90 | 90 | 0.244 |
| 91 | 91 | 0.596 |
| 92 | 92 | 0.852 |
| 93 | 93 | 0.511 |
| 94 | 94 | 0.907 |
| 95 | 95 | 0.134 |
| 96 | 96 | 0.821 |
| 97 | 97 | 0.418 |
| 98 | 98 | 0.111 |
| 99 | 99 | 0.106 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12371
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000271 human cardiac mesenchymal precursor cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)
