Personal tools

FF:11251-116E9: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 69: Line 69:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.57980160216235e-267!GO:0043226;organelle;2.59623379166687e-209!GO:0043229;intracellular organelle;9.795691439257e-209!GO:0005737;cytoplasm;1.56437778214952e-205!GO:0043231;intracellular membrane-bound organelle;3.07312132010372e-195!GO:0043227;membrane-bound organelle;5.11235543529791e-195!GO:0044422;organelle part;8.86816526058466e-147!GO:0044446;intracellular organelle part;2.4487534010813e-145!GO:0044444;cytoplasmic part;2.30723656740411e-131!GO:0032991;macromolecular complex;2.32326906220069e-102!GO:0044238;primary metabolic process;3.91469536401304e-94!GO:0044237;cellular metabolic process;7.39299103691264e-93!GO:0030529;ribonucleoprotein complex;3.02385526263743e-89!GO:0043170;macromolecule metabolic process;5.06178498701997e-85!GO:0005634;nucleus;9.61482603161656e-81!GO:0005515;protein binding;2.19484494853583e-78!GO:0043233;organelle lumen;1.00103022609475e-76!GO:0031974;membrane-enclosed lumen;1.00103022609475e-76!GO:0044428;nuclear part;1.72270282558268e-75!GO:0003723;RNA binding;5.23163068619289e-72!GO:0005739;mitochondrion;5.23065770330198e-71!GO:0006412;translation;3.17621512193191e-55!GO:0005840;ribosome;4.15897233864022e-55!GO:0019538;protein metabolic process;1.16977275242012e-51!GO:0043234;protein complex;4.0318545297499e-51!GO:0006396;RNA processing;4.0318545297499e-51!GO:0016043;cellular component organization and biogenesis;6.3802346587386e-50!GO:0043283;biopolymer metabolic process;3.71436214852936e-49!GO:0003735;structural constituent of ribosome;5.95488897243006e-48!GO:0044429;mitochondrial part;7.47242834935073e-47!GO:0010467;gene expression;2.43667936457122e-46!GO:0015031;protein transport;2.95793997504261e-46!GO:0033036;macromolecule localization;9.76833417102651e-46!GO:0031090;organelle membrane;1.14794284146146e-45!GO:0031981;nuclear lumen;2.91690037533475e-45!GO:0009058;biosynthetic process;3.02191197559719e-45!GO:0044267;cellular protein metabolic process;5.87504287317042e-45!GO:0043228;non-membrane-bound organelle;9.64466070693376e-45!GO:0043232;intracellular non-membrane-bound organelle;9.64466070693376e-45!GO:0044260;cellular macromolecule metabolic process;1.01702944645759e-44!GO:0044249;cellular biosynthetic process;4.86286234416083e-43!GO:0045184;establishment of protein localization;1.4419086481233e-42!GO:0008104;protein localization;2.00776661252476e-42!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.51506189119737e-42!GO:0005829;cytosol;3.34272498655475e-41!GO:0009059;macromolecule biosynthetic process;6.61505908756783e-41!GO:0031967;organelle envelope;3.61709373607128e-40!GO:0033279;ribosomal subunit;5.32601213957282e-40!GO:0031975;envelope;9.37325094128374e-40!GO:0016071;mRNA metabolic process;4.41252724055682e-39!GO:0065003;macromolecular complex assembly;7.39502094227911e-37!GO:0008380;RNA splicing;2.86365295110126e-36!GO:0046907;intracellular transport;2.43547024724474e-35!GO:0006996;organelle organization and biogenesis;2.49546543576285e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.18224590443029e-34!GO:0006397;mRNA processing;7.52602524720575e-34!GO:0022607;cellular component assembly;3.65909694336411e-33!GO:0006886;intracellular protein transport;2.76079693866482e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.43977759468481e-29!GO:0006259;DNA metabolic process;2.85501073647216e-29!GO:0005740;mitochondrial envelope;5.36789569933109e-28!GO:0005654;nucleoplasm;4.23355595262294e-27!GO:0005681;spliceosome;1.36300651157693e-26!GO:0031966;mitochondrial membrane;5.11794385041512e-26!GO:0019866;organelle inner membrane;7.12899800147304e-25!GO:0044445;cytosolic part;1.40162759865719e-24!GO:0007049;cell cycle;1.36405076115213e-23!GO:0005743;mitochondrial inner membrane;2.9514136331547e-23!GO:0003676;nucleic acid binding;3.29324453702267e-23!GO:0000166;nucleotide binding;5.34164260896895e-23!GO:0051649;establishment of cellular localization;1.07411581690219e-22!GO:0031980;mitochondrial lumen;1.11744263913873e-22!GO:0005759;mitochondrial matrix;1.11744263913873e-22!GO:0051641;cellular localization;1.2573113098812e-22!GO:0044451;nucleoplasm part;1.33927954245428e-21!GO:0016874;ligase activity;4.8660141478284e-21!GO:0016070;RNA metabolic process;1.05153744962231e-20!GO:0015934;large ribosomal subunit;1.60860887847537e-20!GO:0015935;small ribosomal subunit;1.89558717273903e-20!GO:0006119;oxidative phosphorylation;3.5591449961373e-20!GO:0016462;pyrophosphatase activity;5.80057788775517e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.21041406695927e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;8.06294913161767e-20!GO:0005730;nucleolus;8.38252877672742e-20!GO:0022618;protein-RNA complex assembly;1.61238247856043e-19!GO:0006457;protein folding;1.83426239741773e-19!GO:0048770;pigment granule;2.97945149059313e-19!GO:0042470;melanosome;2.97945149059313e-19!GO:0017111;nucleoside-triphosphatase activity;4.78754386506147e-19!GO:0012505;endomembrane system;5.35578413819788e-19!GO:0044455;mitochondrial membrane part;1.18033351890075e-18!GO:0006512;ubiquitin cycle;1.07049718645129e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.85306805827487e-17!GO:0006605;protein targeting;3.8771027760817e-17!GO:0022402;cell cycle process;4.03108421183217e-17!GO:0044265;cellular macromolecule catabolic process;5.87886668954387e-17!GO:0019941;modification-dependent protein catabolic process;7.45899613993574e-17!GO:0043632;modification-dependent macromolecule catabolic process;7.45899613993574e-17!GO:0005783;endoplasmic reticulum;7.78744267381518e-17!GO:0006511;ubiquitin-dependent protein catabolic process;9.07120682903622e-17!GO:0006974;response to DNA damage stimulus;1.06222636720103e-16!GO:0044257;cellular protein catabolic process;1.42337408162416e-16!GO:0043285;biopolymer catabolic process;2.35707890767631e-16!GO:0008134;transcription factor binding;4.96638668056069e-16!GO:0017076;purine nucleotide binding;7.39622914000272e-16!GO:0032553;ribonucleotide binding;7.77796804178469e-16!GO:0032555;purine ribonucleotide binding;7.77796804178469e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.17925397892221e-15!GO:0000278;mitotic cell cycle;1.5145585079163e-15!GO:0042254;ribosome biogenesis and assembly;1.84076701309829e-15!GO:0005761;mitochondrial ribosome;2.41651769175785e-15!GO:0000313;organellar ribosome;2.41651769175785e-15!GO:0008135;translation factor activity, nucleic acid binding;2.55070740582481e-15!GO:0005794;Golgi apparatus;3.71541296174708e-15!GO:0005746;mitochondrial respiratory chain;5.08795975652025e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.70905294687539e-15!GO:0009057;macromolecule catabolic process;6.396208661617e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.39918002269629e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.50099846838817e-14!GO:0044248;cellular catabolic process;1.74535105228457e-14!GO:0043412;biopolymer modification;2.36829391790279e-14!GO:0030163;protein catabolic process;2.51973863707798e-14!GO:0051186;cofactor metabolic process;4.56722418635702e-14!GO:0005694;chromosome;1.33568353506707e-13!GO:0012501;programmed cell death;1.34772194340491e-13!GO:0006281;DNA repair;1.54376379399996e-13!GO:0044432;endoplasmic reticulum part;1.76955096982277e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.47307409003819e-13!GO:0000375;RNA splicing, via transesterification reactions;2.47307409003819e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.47307409003819e-13!GO:0006915;apoptosis;2.79180014486628e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.91245505157944e-13!GO:0003954;NADH dehydrogenase activity;2.91245505157944e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.91245505157944e-13!GO:0051082;unfolded protein binding;4.18212101412106e-13!GO:0051276;chromosome organization and biogenesis;4.72218178369489e-13!GO:0048193;Golgi vesicle transport;5.07869430813309e-13!GO:0006464;protein modification process;8.10931412912856e-13!GO:0005635;nuclear envelope;1.08353439299261e-12!GO:0005524;ATP binding;1.19008497021482e-12!GO:0006461;protein complex assembly;1.7903169759398e-12!GO:0032559;adenyl ribonucleotide binding;2.1558325012651e-12!GO:0030554;adenyl nucleotide binding;2.68555988609236e-12!GO:0006413;translational initiation;3.08476904831211e-12!GO:0006913;nucleocytoplasmic transport;4.27463743022436e-12!GO:0009719;response to endogenous stimulus;4.38183050100956e-12!GO:0006732;coenzyme metabolic process;4.99413926794874e-12!GO:0008219;cell death;5.59971795045322e-12!GO:0016265;death;5.59971795045322e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.95649923126665e-12!GO:0006446;regulation of translational initiation;7.54263593621635e-12!GO:0043687;post-translational protein modification;7.87032113088035e-12!GO:0042775;organelle ATP synthesis coupled electron transport;8.51468475607239e-12!GO:0042773;ATP synthesis coupled electron transport;8.51468475607239e-12!GO:0044427;chromosomal part;1.04271570180842e-11!GO:0051169;nuclear transport;1.17946485280495e-11!GO:0003743;translation initiation factor activity;1.38380321109596e-11!GO:0022403;cell cycle phase;1.60555700457802e-11!GO:0016604;nuclear body;1.71084453171973e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.07735525314061e-11!GO:0045271;respiratory chain complex I;2.07735525314061e-11!GO:0005747;mitochondrial respiratory chain complex I;2.07735525314061e-11!GO:0031965;nuclear membrane;2.98395888710116e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;3.00892937591847e-11!GO:0016192;vesicle-mediated transport;3.17545546799771e-11!GO:0006260;DNA replication;4.30330939876276e-11!GO:0000074;regulation of progression through cell cycle;4.56517373053032e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.34561945745959e-11!GO:0008565;protein transporter activity;6.21772901687671e-11!GO:0051726;regulation of cell cycle;6.57614042509409e-11!GO:0044453;nuclear membrane part;6.60405922822886e-11!GO:0000087;M phase of mitotic cell cycle;7.63345199012682e-11!GO:0006399;tRNA metabolic process;1.12554025822029e-10!GO:0006323;DNA packaging;1.12554025822029e-10!GO:0007067;mitosis;1.30366917725779e-10!GO:0050794;regulation of cellular process;1.51863421377305e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.84114956084997e-10!GO:0006366;transcription from RNA polymerase II promoter;1.99751934854985e-10!GO:0017038;protein import;4.36066663766981e-10!GO:0006364;rRNA processing;4.40672092761504e-10!GO:0009055;electron carrier activity;4.52289913307462e-10!GO:0008639;small protein conjugating enzyme activity;5.93912079071291e-10!GO:0016072;rRNA metabolic process;6.76087311006037e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.04113591364433e-10!GO:0004386;helicase activity;9.78278267388506e-10!GO:0005789;endoplasmic reticulum membrane;9.91142289170478e-10!GO:0004842;ubiquitin-protein ligase activity;9.99880200385799e-10!GO:0048523;negative regulation of cellular process;1.07147177325144e-09!GO:0009259;ribonucleotide metabolic process;1.18845517475361e-09!GO:0051301;cell division;1.23584660339062e-09!GO:0005643;nuclear pore;1.71293625964467e-09!GO:0019787;small conjugating protein ligase activity;1.8049668021798e-09!GO:0003712;transcription cofactor activity;1.86266411123489e-09!GO:0006163;purine nucleotide metabolic process;2.54357123674791e-09!GO:0042623;ATPase activity, coupled;2.57222918827046e-09!GO:0016887;ATPase activity;2.95883095112234e-09!GO:0016607;nuclear speck;3.10308910065167e-09!GO:0043067;regulation of programmed cell death;4.09952868857409e-09!GO:0042981;regulation of apoptosis;4.86391311030991e-09!GO:0000279;M phase;6.81170373597509e-09!GO:0009060;aerobic respiration;7.00332732694008e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.01061864326928e-09!GO:0051246;regulation of protein metabolic process;7.24676048533943e-09!GO:0006164;purine nucleotide biosynthetic process;7.30353065162422e-09!GO:0005793;ER-Golgi intermediate compartment;7.32914755920366e-09!GO:0009260;ribonucleotide biosynthetic process;7.98934269855927e-09!GO:0009056;catabolic process;8.1592061440127e-09!GO:0003924;GTPase activity;8.64330979834068e-09!GO:0009150;purine ribonucleotide metabolic process;9.34455588356833e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.02383571746601e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.02383571746601e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.02383571746601e-08!GO:0043038;amino acid activation;1.19640836476629e-08!GO:0006418;tRNA aminoacylation for protein translation;1.19640836476629e-08!GO:0043039;tRNA aminoacylation;1.19640836476629e-08!GO:0045333;cellular respiration;1.53287586570905e-08!GO:0048475;coated membrane;1.54634371982815e-08!GO:0030117;membrane coat;1.54634371982815e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.59120886119708e-08!GO:0007005;mitochondrion organization and biogenesis;2.03404557047626e-08!GO:0016881;acid-amino acid ligase activity;2.31292891376438e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.59858039024935e-08!GO:0065002;intracellular protein transport across a membrane;3.15799899769505e-08!GO:0000785;chromatin;3.28424179538316e-08!GO:0048519;negative regulation of biological process;3.45475795225078e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.55210915493372e-08!GO:0065004;protein-DNA complex assembly;4.54359854221991e-08!GO:0008026;ATP-dependent helicase activity;5.32502101957586e-08!GO:0050657;nucleic acid transport;5.36714318817542e-08!GO:0051236;establishment of RNA localization;5.36714318817542e-08!GO:0050658;RNA transport;5.36714318817542e-08!GO:0005768;endosome;6.34141353966513e-08!GO:0006403;RNA localization;6.82334658781673e-08!GO:0051188;cofactor biosynthetic process;7.63874577364244e-08!GO:0030120;vesicle coat;8.06545912468088e-08!GO:0030662;coated vesicle membrane;8.06545912468088e-08!GO:0043566;structure-specific DNA binding;8.66522763155455e-08!GO:0006099;tricarboxylic acid cycle;8.66522763155455e-08!GO:0046356;acetyl-CoA catabolic process;8.66522763155455e-08!GO:0006333;chromatin assembly or disassembly;9.13479040537071e-08!GO:0009141;nucleoside triphosphate metabolic process;1.00234950418844e-07!GO:0015986;ATP synthesis coupled proton transport;1.07777525730431e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.07777525730431e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.23191201293865e-07!GO:0032446;protein modification by small protein conjugation;1.48277764121276e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.52674548958655e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.52674548958655e-07!GO:0051170;nuclear import;1.63307340078323e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.69452680613704e-07!GO:0046930;pore complex;1.73305067899791e-07!GO:0003697;single-stranded DNA binding;1.81558747833977e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.94955263480466e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.38223006230566e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.38223006230566e-07!GO:0016567;protein ubiquitination;2.45929240956387e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.45929240956387e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.58873666986218e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.58873666986218e-07!GO:0009109;coenzyme catabolic process;2.83835147074434e-07!GO:0050789;regulation of biological process;3.72665624333795e-07!GO:0016740;transferase activity;3.7878442555914e-07!GO:0006084;acetyl-CoA metabolic process;4.08267757433361e-07!GO:0006606;protein import into nucleus;4.11734413047678e-07!GO:0016779;nucleotidyltransferase activity;5.4507298116671e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.78175719076393e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.53874694580336e-07!GO:0043069;negative regulation of programmed cell death;7.62135853824108e-07!GO:0006888;ER to Golgi vesicle-mediated transport;7.7698396542305e-07!GO:0031324;negative regulation of cellular metabolic process;1.0379556549868e-06!GO:0044431;Golgi apparatus part;1.04978891177327e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.05839864121794e-06!GO:0051187;cofactor catabolic process;1.17345059442164e-06!GO:0043623;cellular protein complex assembly;1.1811807970022e-06!GO:0019829;cation-transporting ATPase activity;1.21819658171111e-06!GO:0000245;spliceosome assembly;1.22351094881137e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.25176903390611e-06!GO:0006916;anti-apoptosis;1.36784561881476e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.4275672994764e-06!GO:0006754;ATP biosynthetic process;1.62989617731966e-06!GO:0006753;nucleoside phosphate metabolic process;1.62989617731966e-06!GO:0015630;microtubule cytoskeleton;1.70105166951641e-06!GO:0009108;coenzyme biosynthetic process;1.74017612536483e-06!GO:0043066;negative regulation of apoptosis;1.74017612536483e-06!GO:0016568;chromatin modification;1.87495855843846e-06!GO:0005525;GTP binding;1.95627462115437e-06!GO:0046034;ATP metabolic process;2.17470886946087e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.43164747040859e-06!GO:0051028;mRNA transport;2.43164747040859e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.54243766372898e-06!GO:0009117;nucleotide metabolic process;2.54243766372898e-06!GO:0045259;proton-transporting ATP synthase complex;2.70355671660799e-06!GO:0004298;threonine endopeptidase activity;4.21022948532262e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.56018964669443e-06!GO:0016491;oxidoreductase activity;4.56713764386265e-06!GO:0006752;group transfer coenzyme metabolic process;4.56713764386265e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.5986943185301e-06!GO:0006334;nucleosome assembly;5.83557452340765e-06!GO:0005667;transcription factor complex;6.30000704822083e-06!GO:0016859;cis-trans isomerase activity;7.01682088692748e-06!GO:0031497;chromatin assembly;7.69381325606828e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.31851065765331e-06!GO:0006793;phosphorus metabolic process;9.54795309403071e-06!GO:0006796;phosphate metabolic process;9.54795309403071e-06!GO:0016481;negative regulation of transcription;1.18954906512585e-05!GO:0006613;cotranslational protein targeting to membrane;1.21402587758808e-05!GO:0031252;leading edge;1.21471125651598e-05!GO:0016853;isomerase activity;1.32356076268813e-05!GO:0009892;negative regulation of metabolic process;1.33065221858151e-05!GO:0031988;membrane-bound vesicle;1.34428658931811e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.47899994168731e-05!GO:0016787;hydrolase activity;1.71696470047636e-05!GO:0005813;centrosome;1.73802244335404e-05!GO:0000139;Golgi membrane;1.78755454604907e-05!GO:0048522;positive regulation of cellular process;1.81016559867855e-05!GO:0005762;mitochondrial large ribosomal subunit;1.87937987531144e-05!GO:0000315;organellar large ribosomal subunit;1.87937987531144e-05!GO:0003724;RNA helicase activity;1.91735336754304e-05!GO:0045786;negative regulation of progression through cell cycle;2.03285604232574e-05!GO:0044440;endosomal part;2.22717327806837e-05!GO:0010008;endosome membrane;2.22717327806837e-05!GO:0019899;enzyme binding;2.36041866650323e-05!GO:0019222;regulation of metabolic process;2.51453232108942e-05!GO:0032561;guanyl ribonucleotide binding;3.10885186739715e-05!GO:0019001;guanyl nucleotide binding;3.10885186739715e-05!GO:0000151;ubiquitin ligase complex;3.16622866956549e-05!GO:0042802;identical protein binding;3.17927690287239e-05!GO:0043021;ribonucleoprotein binding;3.39156707274965e-05!GO:0051329;interphase of mitotic cell cycle;3.46317180097635e-05!GO:0051427;hormone receptor binding;3.53244741255967e-05!GO:0005788;endoplasmic reticulum lumen;3.655497146385e-05!GO:0003713;transcription coactivator activity;4.15488052227632e-05!GO:0016564;transcription repressor activity;4.38769408484937e-05!GO:0003899;DNA-directed RNA polymerase activity;4.96563249889417e-05!GO:0008654;phospholipid biosynthetic process;5.89024947531458e-05!GO:0005798;Golgi-associated vesicle;6.13106286405303e-05!GO:0005815;microtubule organizing center;6.14631301263936e-05!GO:0016310;phosphorylation;6.14631301263936e-05!GO:0035257;nuclear hormone receptor binding;6.91339185258614e-05!GO:0005769;early endosome;7.07864620520786e-05!GO:0016126;sterol biosynthetic process;7.19781267896634e-05!GO:0031982;vesicle;7.26884259595533e-05!GO:0030118;clathrin coat;7.84558785466462e-05!GO:0016363;nuclear matrix;8.69243104979117e-05!GO:0065009;regulation of a molecular function;8.69243104979117e-05!GO:0048471;perinuclear region of cytoplasm;8.99617320546681e-05!GO:0000314;organellar small ribosomal subunit;9.27645971278899e-05!GO:0005763;mitochondrial small ribosomal subunit;9.27645971278899e-05!GO:0051325;interphase;9.42650358611711e-05!GO:0006261;DNA-dependent DNA replication;9.91521245655962e-05!GO:0005770;late endosome;9.94506609050176e-05!GO:0008092;cytoskeletal protein binding;0.000102782049153754!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000105171822098551!GO:0031410;cytoplasmic vesicle;0.000106287252118076!GO:0009967;positive regulation of signal transduction;0.000132431729400286!GO:0030119;AP-type membrane coat adaptor complex;0.000165064771852824!GO:0005819;spindle;0.000168062767942903!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000172281361250363!GO:0003690;double-stranded DNA binding;0.000185161547900849!GO:0015980;energy derivation by oxidation of organic compounds;0.000193192516916742!GO:0007243;protein kinase cascade;0.000226161502415431!GO:0045454;cell redox homeostasis;0.000226161502415431!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000226161502415431!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000231347368310589!GO:0016563;transcription activator activity;0.000232688156488349!GO:0003714;transcription corepressor activity;0.000247265216621772!GO:0030867;rough endoplasmic reticulum membrane;0.000269854734386174!GO:0051168;nuclear export;0.000291629376187525!GO:0050662;coenzyme binding;0.000301397334271763!GO:0030036;actin cytoskeleton organization and biogenesis;0.000301664964093883!GO:0007264;small GTPase mediated signal transduction;0.000303592646929028!GO:0006612;protein targeting to membrane;0.000311011362357436!GO:0051252;regulation of RNA metabolic process;0.000311491082000313!GO:0007010;cytoskeleton organization and biogenesis;0.00031293856046143!GO:0030131;clathrin adaptor complex;0.000324026372394412!GO:0003729;mRNA binding;0.000343313206914413!GO:0031968;organelle outer membrane;0.000346461563636793!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000356996101512947!GO:0008186;RNA-dependent ATPase activity;0.000357809018305861!GO:0019867;outer membrane;0.000361199881726365!GO:0005048;signal sequence binding;0.000426877132024972!GO:0000075;cell cycle checkpoint;0.000426919291246955!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000447281238669867!GO:0045892;negative regulation of transcription, DNA-dependent;0.000498353241776852!GO:0007088;regulation of mitosis;0.000504783612527072!GO:0065007;biological regulation;0.000558446379308!GO:0005741;mitochondrial outer membrane;0.000583969456529876!GO:0005885;Arp2/3 protein complex;0.000590038461951228!GO:0006626;protein targeting to mitochondrion;0.000598007085862493!GO:0008250;oligosaccharyl transferase complex;0.000605235348100234!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000613566104335442!GO:0006091;generation of precursor metabolites and energy;0.000613566104335442!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000674175590534128!GO:0006695;cholesterol biosynthetic process;0.000674973155749003!GO:0006839;mitochondrial transport;0.000677442900925574!GO:0005791;rough endoplasmic reticulum;0.00076031408427844!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000774334829686132!GO:0001726;ruffle;0.000798616654863535!GO:0006417;regulation of translation;0.000802991338076999!GO:0044452;nucleolar part;0.000818310124018261!GO:0043488;regulation of mRNA stability;0.000849449908865169!GO:0043487;regulation of RNA stability;0.000849449908865169!GO:0045893;positive regulation of transcription, DNA-dependent;0.000849449908865169!GO:0051920;peroxiredoxin activity;0.000872451586295593!GO:0033116;ER-Golgi intermediate compartment membrane;0.000879455451602401!GO:0008610;lipid biosynthetic process;0.000898138277223637!GO:0048518;positive regulation of biological process;0.000905559491178059!GO:0004576;oligosaccharyl transferase activity;0.000930218402924137!GO:0005657;replication fork;0.000941514814470478!GO:0030031;cell projection biogenesis;0.000961559710447519!GO:0004004;ATP-dependent RNA helicase activity;0.000984646918084984!GO:0043681;protein import into mitochondrion;0.0010400034457043!GO:0006402;mRNA catabolic process;0.00105656004609839!GO:0000059;protein import into nucleus, docking;0.00107018145140213!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00111116846774192!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00111116846774192!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00111116846774192!GO:0008033;tRNA processing;0.00111239340645303!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00118560759416586!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00119805425237497!GO:0008632;apoptotic program;0.00120202553691556!GO:0030132;clathrin coat of coated pit;0.00126013935623328!GO:0051287;NAD binding;0.00133468110622152!GO:0007006;mitochondrial membrane organization and biogenesis;0.00140763024483866!GO:0005905;coated pit;0.00141636849901495!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00143828922560618!GO:0030029;actin filament-based process;0.00145293485912095!GO:0007051;spindle organization and biogenesis;0.00147982232527367!GO:0006891;intra-Golgi vesicle-mediated transport;0.00152493112307812!GO:0030658;transport vesicle membrane;0.00152493112307812!GO:0005856;cytoskeleton;0.00161070452486953!GO:0008094;DNA-dependent ATPase activity;0.00168138133217275!GO:0009116;nucleoside metabolic process;0.00172962160994848!GO:0005773;vacuole;0.00173749551039511!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00176101819523951!GO:0019843;rRNA binding;0.00180019805394573!GO:0006414;translational elongation;0.00180019805394573!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00187644522758651!GO:0015631;tubulin binding;0.0018796066425559!GO:0051789;response to protein stimulus;0.00191054406564157!GO:0006986;response to unfolded protein;0.00191054406564157!GO:0051052;regulation of DNA metabolic process;0.00199573023759804!GO:0030880;RNA polymerase complex;0.00202675968803662!GO:0031323;regulation of cellular metabolic process;0.00204535277818354!GO:0003684;damaged DNA binding;0.00204535277818354!GO:0016044;membrane organization and biogenesis;0.00204746007434009!GO:0006401;RNA catabolic process;0.00218749550454423!GO:0048500;signal recognition particle;0.00227602844421547!GO:0019752;carboxylic acid metabolic process;0.00235172632050088!GO:0031072;heat shock protein binding;0.00236080799995851!GO:0008139;nuclear localization sequence binding;0.00239046819693215!GO:0018196;peptidyl-asparagine modification;0.00239853110670854!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00239853110670854!GO:0000049;tRNA binding;0.00255173352310324!GO:0050790;regulation of catalytic activity;0.00256699539060354!GO:0030133;transport vesicle;0.00260183724254014!GO:0006082;organic acid metabolic process;0.00261990453192838!GO:0043065;positive regulation of apoptosis;0.00265785842966742!GO:0008243;plasminogen activator activity;0.0026618505401126!GO:0006289;nucleotide-excision repair;0.00267634877415292!GO:0030663;COPI coated vesicle membrane;0.00267634877415292!GO:0030126;COPI vesicle coat;0.00267634877415292!GO:0045941;positive regulation of transcription;0.00298436653121579!GO:0009112;nucleobase metabolic process;0.00304894424210802!GO:0048037;cofactor binding;0.00318646303960104!GO:0003711;transcription elongation regulator activity;0.00326228298561156!GO:0043068;positive regulation of programmed cell death;0.00327991376333686!GO:0000786;nucleosome;0.00339870318517434!GO:0006383;transcription from RNA polymerase III promoter;0.00341428994692952!GO:0008361;regulation of cell size;0.00351443716289232!GO:0009165;nucleotide biosynthetic process;0.00357340783791183!GO:0048468;cell development;0.00360984714449196!GO:0046467;membrane lipid biosynthetic process;0.00363950082851101!GO:0046474;glycerophospholipid biosynthetic process;0.00384788811490929!GO:0051098;regulation of binding;0.00388966684311414!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00397632432011324!GO:0030660;Golgi-associated vesicle membrane;0.00401176191843075!GO:0008312;7S RNA binding;0.00402771963936297!GO:0005684;U2-dependent spliceosome;0.00407808681312011!GO:0030125;clathrin vesicle coat;0.00413051375802833!GO:0030665;clathrin coated vesicle membrane;0.00413051375802833!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00413588233893479!GO:0000428;DNA-directed RNA polymerase complex;0.00413588233893479!GO:0000323;lytic vacuole;0.00414493286196657!GO:0005764;lysosome;0.00414493286196657!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00419742251543792!GO:0007050;cell cycle arrest;0.00434338313469394!GO:0031326;regulation of cellular biosynthetic process;0.0044504197859366!GO:0016251;general RNA polymerase II transcription factor activity;0.00448851855709333!GO:0030176;integral to endoplasmic reticulum membrane;0.00456465796743695!GO:0006350;transcription;0.00472512627530476!GO:0000082;G1/S transition of mitotic cell cycle;0.00488331851849146!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0048963130531782!GO:0016049;cell growth;0.00503331372626009!GO:0051101;regulation of DNA binding;0.0050361754197617!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00504769059330176!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00504769059330176!GO:0016408;C-acyltransferase activity;0.00513979976009288!GO:0003682;chromatin binding;0.00535071264406437!GO:0051540;metal cluster binding;0.00536329315472604!GO:0051536;iron-sulfur cluster binding;0.00536329315472604!GO:0006302;double-strand break repair;0.00536854060441056!GO:0046489;phosphoinositide biosynthetic process;0.00538108569517147!GO:0006352;transcription initiation;0.00548188968678165!GO:0008637;apoptotic mitochondrial changes;0.00549815771757853!GO:0004674;protein serine/threonine kinase activity;0.00550045476893608!GO:0008180;signalosome;0.00551839671120092!GO:0003746;translation elongation factor activity;0.00553680433635727!GO:0030137;COPI-coated vesicle;0.00565915399696181!GO:0051087;chaperone binding;0.00572764970829632!GO:0048487;beta-tubulin binding;0.00578085096767849!GO:0030027;lamellipodium;0.00578683745461658!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00587619471712072!GO:0045047;protein targeting to ER;0.00587619471712072!GO:0006310;DNA recombination;0.00600595104801279!GO:0030521;androgen receptor signaling pathway;0.00600595104801279!GO:0006595;polyamine metabolic process;0.0061285773010784!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00629329063082225!GO:0043022;ribosome binding;0.00649345367958009!GO:0006611;protein export from nucleus;0.00664550242186614!GO:0006520;amino acid metabolic process;0.00673028392251606!GO:0035258;steroid hormone receptor binding;0.00682313915994484!GO:0003678;DNA helicase activity;0.00721338594166642!GO:0017166;vinculin binding;0.00727122521337158!GO:0005869;dynactin complex;0.00743815139573096!GO:0006144;purine base metabolic process;0.00757618179804943!GO:0016197;endosome transport;0.00758741188083362!GO:0051338;regulation of transferase activity;0.00773434922937407!GO:0000775;chromosome, pericentric region;0.00784209825147267!GO:0008629;induction of apoptosis by intracellular signals;0.00801579778496051!GO:0032984;macromolecular complex disassembly;0.00823446543886816!GO:0043624;cellular protein complex disassembly;0.00823446543886816!GO:0046483;heterocycle metabolic process;0.00868727907385948!GO:0010468;regulation of gene expression;0.00870372989124815!GO:0009889;regulation of biosynthetic process;0.00922146850468088!GO:0030032;lamellipodium biogenesis;0.00927153362722995!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00950253099299769!GO:0006354;RNA elongation;0.0095287168216773!GO:0005149;interleukin-1 receptor binding;0.00988346514369234!GO:0000776;kinetochore;0.0101277764597336!GO:0008652;amino acid biosynthetic process;0.0101616502886396!GO:0016272;prefoldin complex;0.0106605496813086!GO:0016584;nucleosome positioning;0.010884523760703!GO:0015992;proton transport;0.0109010884097112!GO:0001558;regulation of cell growth;0.011577204472838!GO:0050750;low-density lipoprotein receptor binding;0.0117318988619369!GO:0031124;mRNA 3'-end processing;0.0117806289240796!GO:0005832;chaperonin-containing T-complex;0.0118136049350704!GO:0007052;mitotic spindle organization and biogenesis;0.0119657154909602!GO:0006338;chromatin remodeling;0.0120305251378751!GO:0006818;hydrogen transport;0.0121737506544129!GO:0046822;regulation of nucleocytoplasmic transport;0.0125024959685381!GO:0009303;rRNA transcription;0.0125692637075873!GO:0030134;ER to Golgi transport vesicle;0.0128948750622605!GO:0007093;mitotic cell cycle checkpoint;0.0129010984942503!GO:0006979;response to oxidative stress;0.0130999975992811!GO:0006950;response to stress;0.0135484524985171!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0138993742424564!GO:0000339;RNA cap binding;0.0139021550920305!GO:0031625;ubiquitin protein ligase binding;0.0140180517221977!GO:0006509;membrane protein ectodomain proteolysis;0.0141819095246738!GO:0033619;membrane protein proteolysis;0.0141819095246738!GO:0031529;ruffle organization and biogenesis;0.0142334366444394!GO:0006650;glycerophospholipid metabolic process;0.0144238406045461!GO:0006376;mRNA splice site selection;0.0144333809522043!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0144333809522043!GO:0043549;regulation of kinase activity;0.014509966829423!GO:0051128;regulation of cellular component organization and biogenesis;0.0145566960909491!GO:0006405;RNA export from nucleus;0.0148743273571783!GO:0005637;nuclear inner membrane;0.0150063875090353!GO:0043241;protein complex disassembly;0.0150074090149632!GO:0032508;DNA duplex unwinding;0.0159059184991618!GO:0032392;DNA geometric change;0.0159059184991618!GO:0008022;protein C-terminus binding;0.0159369849376995!GO:0031970;organelle envelope lumen;0.0162786584003913!GO:0008168;methyltransferase activity;0.0162786584003913!GO:0030833;regulation of actin filament polymerization;0.0163741254117152!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0167456547139515!GO:0016741;transferase activity, transferring one-carbon groups;0.0168072981048705!GO:0000209;protein polyubiquitination;0.0168468301724617!GO:0042770;DNA damage response, signal transduction;0.0168626686598477!GO:0007004;telomere maintenance via telomerase;0.017256323447675!GO:0005758;mitochondrial intermembrane space;0.0172601671321698!GO:0001836;release of cytochrome c from mitochondria;0.0172811004748397!GO:0008097;5S rRNA binding;0.0174352473174034!GO:0016125;sterol metabolic process;0.0179596852500966!GO:0032200;telomere organization and biogenesis;0.0182604722480836!GO:0000723;telomere maintenance;0.0182604722480836!GO:0030127;COPII vesicle coat;0.0184626123970978!GO:0012507;ER to Golgi transport vesicle membrane;0.0184626123970978!GO:0030384;phosphoinositide metabolic process;0.0189569886594931!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0189664024003402!GO:0033673;negative regulation of kinase activity;0.0189804147155142!GO:0006469;negative regulation of protein kinase activity;0.0189804147155142!GO:0035035;histone acetyltransferase binding;0.0189880361970067!GO:0000178;exosome (RNase complex);0.0190279057759675!GO:0045792;negative regulation of cell size;0.0190279057759675!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0191488972789602!GO:0007265;Ras protein signal transduction;0.0192504961142959!GO:0048146;positive regulation of fibroblast proliferation;0.0197468270312507!GO:0005874;microtubule;0.0199576820599335!GO:0006275;regulation of DNA replication;0.0201577094047957!GO:0008283;cell proliferation;0.0202350323672605!GO:0016407;acetyltransferase activity;0.0202353425844829!GO:0006917;induction of apoptosis;0.0206234154752661!GO:0046983;protein dimerization activity;0.0206903006274761!GO:0031901;early endosome membrane;0.0207562038972519!GO:0008234;cysteine-type peptidase activity;0.020881444390935!GO:0051539;4 iron, 4 sulfur cluster binding;0.0210205717031788!GO:0045045;secretory pathway;0.0211439184329891!GO:0022890;inorganic cation transmembrane transporter activity;0.0222073792670779!GO:0004527;exonuclease activity;0.022271702109202!GO:0006268;DNA unwinding during replication;0.0226039402137711!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0227433080104837!GO:0015002;heme-copper terminal oxidase activity;0.0227433080104837!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0227433080104837!GO:0004129;cytochrome-c oxidase activity;0.0227433080104837!GO:0030308;negative regulation of cell growth;0.0227433080104837!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0227433080104837!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0231251729242791!GO:0030041;actin filament polymerization;0.0233549487001496!GO:0045926;negative regulation of growth;0.0235193084047706!GO:0000086;G2/M transition of mitotic cell cycle;0.0235743419359346!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0238560770070763!GO:0004680;casein kinase activity;0.0239871757200309!GO:0048144;fibroblast proliferation;0.0245759901926795!GO:0048145;regulation of fibroblast proliferation;0.0245759901926795!GO:0007034;vacuolar transport;0.0247330044639267!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0255540779583577!GO:0000792;heterochromatin;0.0257064271464212!GO:0004518;nuclease activity;0.025801700877019!GO:0000228;nuclear chromosome;0.025801700877019!GO:0005862;muscle thin filament tropomyosin;0.0258615387564803!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0262216857067974!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0262216857067974!GO:0015399;primary active transmembrane transporter activity;0.0262216857067974!GO:0012502;induction of programmed cell death;0.026839022568551!GO:0045334;clathrin-coated endocytic vesicle;0.026839022568551!GO:0009119;ribonucleoside metabolic process;0.026839022568551!GO:0043154;negative regulation of caspase activity;0.0269769513351321!GO:0046966;thyroid hormone receptor binding;0.0269789266968784!GO:0050681;androgen receptor binding;0.0275121230600782!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0279413136831606!GO:0006378;mRNA polyadenylation;0.0293561032581414!GO:0006284;base-excision repair;0.029825104576855!GO:0051348;negative regulation of transferase activity;0.030210174229643!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.030210174229643!GO:0030518;steroid hormone receptor signaling pathway;0.0303973945414136!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0304816043666633!GO:0030145;manganese ion binding;0.0327327616076272!GO:0006892;post-Golgi vesicle-mediated transport;0.0332205070661975!GO:0008426;protein kinase C inhibitor activity;0.0335115338359551!GO:0000096;sulfur amino acid metabolic process;0.0335115338359551!GO:0042393;histone binding;0.0335115338359551!GO:0008538;proteasome activator activity;0.0335784590355893!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0337676821727074!GO:0022406;membrane docking;0.0339093649184183!GO:0048278;vesicle docking;0.0339093649184183!GO:0043550;regulation of lipid kinase activity;0.0340126958905686!GO:0031123;RNA 3'-end processing;0.0340417743261932!GO:0005938;cell cortex;0.0341559902634889!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0343715535464835!GO:0045859;regulation of protein kinase activity;0.0344515519616394!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.03486052050451!GO:0007266;Rho protein signal transduction;0.0350633383973824!GO:0007021;tubulin folding;0.0360204117446942!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0360652440543416!GO:0004532;exoribonuclease activity;0.0367043254988388!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0367043254988388!GO:0005669;transcription factor TFIID complex;0.0369053550852682!GO:0031371;ubiquitin conjugating enzyme complex;0.0369259667619438!GO:0006497;protein amino acid lipidation;0.0369259667619438!GO:0040029;regulation of gene expression, epigenetic;0.0374976776940696!GO:0048660;regulation of smooth muscle cell proliferation;0.0377135500427911!GO:0006607;NLS-bearing substrate import into nucleus;0.0378092833992959!GO:0005784;translocon complex;0.0378186392072976!GO:0006541;glutamine metabolic process;0.0381767545762283!GO:0051336;regulation of hydrolase activity;0.0387449559138799!GO:0006984;ER-nuclear signaling pathway;0.0389355934983251!GO:0022411;cellular component disassembly;0.0389355934983251!GO:0032774;RNA biosynthetic process;0.0389658538711779!GO:0046128;purine ribonucleoside metabolic process;0.0390223267904354!GO:0042278;purine nucleoside metabolic process;0.0390223267904354!GO:0000781;chromosome, telomeric region;0.039032630502048!GO:0051059;NF-kappaB binding;0.0392776415233221!GO:0017134;fibroblast growth factor binding;0.0396465117012562!GO:0009124;nucleoside monophosphate biosynthetic process;0.0397394147844653!GO:0009123;nucleoside monophosphate metabolic process;0.0397394147844653!GO:0022408;negative regulation of cell-cell adhesion;0.0405281870350235!GO:0030659;cytoplasmic vesicle membrane;0.0407982626725961!GO:0009451;RNA modification;0.0410157760871561!GO:0003756;protein disulfide isomerase activity;0.0436817362557711!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0436817362557711!GO:0006351;transcription, DNA-dependent;0.0436817362557711!GO:0030128;clathrin coat of endocytic vesicle;0.0436817362557711!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0436817362557711!GO:0030122;AP-2 adaptor complex;0.0436817362557711!GO:0006506;GPI anchor biosynthetic process;0.0436817362557711!GO:0051272;positive regulation of cell motility;0.0440100975579374!GO:0040017;positive regulation of locomotion;0.0440100975579374!GO:0006904;vesicle docking during exocytosis;0.0440100975579374!GO:0042158;lipoprotein biosynthetic process;0.0441920054960086!GO:0004448;isocitrate dehydrogenase activity;0.0445926940239457!GO:0016791;phosphoric monoester hydrolase activity;0.0445926940239457!GO:0030911;TPR domain binding;0.0452248625389853!GO:0006505;GPI anchor metabolic process;0.045279387635181!GO:0000922;spindle pole;0.045936953956491!GO:0006643;membrane lipid metabolic process;0.0460779056705393!GO:0031902;late endosome membrane;0.0460779056705393!GO:0006740;NADPH regeneration;0.0464825412382409!GO:0006098;pentose-phosphate shunt;0.0464825412382409!GO:0003702;RNA polymerase II transcription factor activity;0.0467777427002625!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.046798359784542!GO:0009081;branched chain family amino acid metabolic process;0.0470037985095228!GO:0004003;ATP-dependent DNA helicase activity;0.0475705509126004!GO:0043281;regulation of caspase activity;0.047571382246828!GO:0043284;biopolymer biosynthetic process;0.0478843316808129!GO:0009161;ribonucleoside monophosphate metabolic process;0.0479085571332807!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0479085571332807!GO:0001952;regulation of cell-matrix adhesion;0.0481978882678467!GO:0044262;cellular carbohydrate metabolic process;0.0482347230862225!GO:0030057;desmosome;0.0491768348066101!GO:0055092;sterol homeostasis;0.0494156567783784!GO:0042632;cholesterol homeostasis;0.0494156567783784
|sample_id=11251
|sample_id=11251
|sample_note=
|sample_note=

Revision as of 19:01, 25 June 2012


Name:Keratinocyte - oral, donor1
Species:Human (Homo sapiens)
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Genomic View: UCSC
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissuegum
dev stageNA
sexunknown
ageNA
cell typekeratinocyte
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberlot:4853
catalog numberSciencell(2615)
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.115
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.187
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.263
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.106
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00492
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0536
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.157
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0.0385
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.197
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.823
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.263
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal1.024
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.325
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0484
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0159
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0239
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.426
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0503
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.13
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.137
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data no result for this sample


TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10879

Jaspar motifP-value
MA0002.20.0139
MA0003.10.899
MA0004.10.197
MA0006.10.15
MA0007.10.924
MA0009.10.271
MA0014.10.392
MA0017.10.751
MA0018.26.5816e-5
MA0019.10.915
MA0024.10.361
MA0025.10.331
MA0027.10.413
MA0028.10.405
MA0029.10.399
MA0030.10.169
MA0031.10.345
MA0035.20.584
MA0038.10.583
MA0039.20.0022
MA0040.10.0467
MA0041.10.619
MA0042.10.483
MA0043.10.0468
MA0046.10.752
MA0047.20.657
MA0048.10.842
MA0050.14.25605e-7
MA0051.10.00178
MA0052.10.029
MA0055.10.0213
MA0057.10.265
MA0058.10.0218
MA0059.10.938
MA0060.10.727
MA0061.10.603
MA0062.20.0949
MA0065.20.221
MA0066.10.271
MA0067.10.00491
MA0068.10.00731
MA0069.10.161
MA0070.10.887
MA0071.10.101
MA0072.10.114
MA0073.10.716
MA0074.10.663
MA0076.10.488
MA0077.10.659
MA0078.10.859
MA0079.20.319
MA0080.25.64225e-6
MA0081.10.0281
MA0083.10.0802
MA0084.10.351
MA0087.10.797
MA0088.10.296
MA0090.10.00148
MA0091.10.1
MA0092.10.43
MA0093.10.125
MA0099.23.58414e-4
MA0100.10.943
MA0101.10.13
MA0102.20.445
MA0103.13.66438e-7
MA0104.20.68
MA0105.10.629
MA0106.14.35335e-13
MA0107.10.091
MA0108.20.0817
MA0111.10.435
MA0112.20.725
MA0113.10.683
MA0114.10.224
MA0115.10.47
MA0116.10.423
MA0117.10.274
MA0119.10.295
MA0122.10.857
MA0124.10.693
MA0125.10.0299
MA0131.10.388
MA0135.10.284
MA0136.10.00455
MA0137.20.179
MA0138.20.153
MA0139.10.702
MA0140.10.263
MA0141.10.236
MA0142.10.22
MA0143.10.243
MA0144.10.834
MA0145.10.0492
MA0146.10.186
MA0147.10.493
MA0148.10.18
MA0149.10.26
MA0150.10.0783
MA0152.10.988
MA0153.10.984
MA0154.10.448
MA0155.10.738
MA0156.10.0148
MA0157.10.165
MA0159.10.663
MA0160.10.0877
MA0162.10.355
MA0163.10.796
MA0164.10.992
MA0258.10.222
MA0259.10.866



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10879

Novel motifP-value
10.837
100.58
1000.938
1010.445
1020.197
1030.115
1040.905
1050.0495
1060.959
1070.0384
1080.735
1090.00478
110.487
1100.18
1110.358
1120.874
1130.815
1140.717
1150.603
1160.419
1170.329
1180.528
1190.981
120.792
1200.00202
1210.819
1220.397
1230.162
1240.207
1250.675
1260.339
1270.602
1280.982
1290.0573
130.0247
1300.341
1310.443
1320.0926
1335.39545e-4
1340.0751
1350.789
1360.0121
1370.144
1380.941
1390.0503
140.919
1400.49
1410.45
1420.226
1430.325
1440.407
1450.252
1460.0288
1470.369
1480.0798
1490.673
150.199
1500.532
1510.578
1520.212
1530.382
1540.515
1550.942
1560.957
1570.987
1580.133
1590.361
160.111
1600.0506
1610.231
1620.14
1630.806
1640.883
1650.911
1660.446
1670.16
1680.461
1690.194
170.221
180.916
190.605
20.0829
200.936
210.937
220.479
230.7
240.00153
250.949
260.745
270.62
280.608
290.339
30.539
300.0454
310.997
320.105
330.0914
340.728
350.125
360.45
370.832
380.418
390.255
40.84
400.159
410.115
420.489
430.948
440.405
450.0444
460.788
470.398
480.173
490.22
50.467
500.351
510.675
520.544
530.435
540.979
550.653
560.481
570.438
580.825
590.556
60.122
600.809
610.934
620.724
630.335
640.626
650.738
660.423
670.316
680.129
690.743
70.51
700.2
710.904
720.527
730.153
740.0293
750.242
760.782
770.0414
780.0335
790.248
80.512
800.106
810.322
820.786
830.276
840.637
850.747
860.259
870.21
880.572
890.267
90.753
900.925
910.989
920.707
930.882
940.831
950.146
960.328
970.867
980.75
990.0382



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10879


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000035 (single fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0002321 (embryonic cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000221 (ectodermal cell)
0000325 (stuff accumulating cell)
0000240 (stratified squamous epithelial cell)
0000311 (keratin accumulating cell)
0000079 (stratified epithelial cell)
0000237 (keratinizing barrier epithelial cell)
0000036 (epithelial fate stem cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002336 (buccal mucosa cell)
0002251 (epithelial cell of alimentary canal)
0002261 (endothelial cell of viscerocranial mucosa)
0002170 (keratinized cell of the oral mucosa)
0000357 (stratified epithelial stem cell)
0000223 (endodermal cell)
0000114 (surface ectodermal cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0000344 (mucosa)
0000064 (organ part)
0004121 (ectoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0004923 (organ component layer)
0005423 (developing anatomical structure)
0001444 (subdivision of head)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0003102 (surface structure)
0000925 (endoderm)
0003729 (mouth mucosa)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0001555 (digestive tract)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000924 (ectoderm)
0000165 (mouth)
0007026 (primitive gut)
0000930 (stomodeum)
0006601 (presumptive ectoderm)
0006595 (presumptive endoderm)

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FF:11251-116E9&oldid=1834610"