FF:10429-106D6: Difference between revisions

Revision as of 18:57, 9 July 2012

Name:	acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	unknown
cell type	t cell
cell line	HPB-ALL
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0249
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.828
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0578
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0.511
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0578
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0538
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.203
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.0298
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.113
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.205
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.244
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.9
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0506
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0298
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.00154
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.0578
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.084
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0.0578
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0219
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.74
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0222
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0.789
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.344
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10746

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0324
MA0003.1	MA0003.1	0.459
MA0004.1	MA0004.1	0.281
MA0006.1	MA0006.1	0.264
MA0007.1	MA0007.1	0.488
MA0009.1	MA0009.1	0.695
MA0014.1	MA0014.1	0.469
MA0017.1	MA0017.1	0.533
MA0018.2	MA0018.2	0.567
MA0019.1	MA0019.1	0.147
MA0024.1	MA0024.1	1.80814e-11
MA0025.1	MA0025.1	0.481
MA0027.1	MA0027.1	0.135
MA0028.1	MA0028.1	1.42389e-6
MA0029.1	MA0029.1	0.793
MA0030.1	MA0030.1	0.227
MA0031.1	MA0031.1	0.503
MA0035.2	MA0035.2	0.0319
MA0038.1	MA0038.1	0.888
MA0039.2	MA0039.2	0.173
MA0040.1	MA0040.1	0.182
MA0041.1	MA0041.1	0.39
MA0042.1	MA0042.1	0.614
MA0043.1	MA0043.1	0.37
MA0046.1	MA0046.1	0.262
MA0047.2	MA0047.2	0.527
MA0048.1	MA0048.1	0.762
MA0050.1	MA0050.1	0.172
MA0051.1	MA0051.1	0.401
MA0052.1	MA0052.1	0.022
MA0055.1	MA0055.1	0.34
MA0057.1	MA0057.1	0.406
MA0058.1	MA0058.1	0.151
MA0059.1	MA0059.1	0.0385
MA0060.1	MA0060.1	9.25153e-13
MA0061.1	MA0061.1	0.607
MA0062.2	MA0062.2	2.28702e-11
MA0065.2	MA0065.2	0.644
MA0066.1	MA0066.1	0.414
MA0067.1	MA0067.1	0.672
MA0068.1	MA0068.1	0.168
MA0069.1	MA0069.1	0.445
MA0070.1	MA0070.1	0.0484
MA0071.1	MA0071.1	0.251
MA0072.1	MA0072.1	0.217
MA0073.1	MA0073.1	0.792
MA0074.1	MA0074.1	0.152
MA0076.1	MA0076.1	9.48402e-11
MA0077.1	MA0077.1	0.939
MA0078.1	MA0078.1	0.951
MA0079.2	MA0079.2	0.237
MA0080.2	MA0080.2	0.103
MA0081.1	MA0081.1	0.327
MA0083.1	MA0083.1	0.00426
MA0084.1	MA0084.1	0.803
MA0087.1	MA0087.1	0.275
MA0088.1	MA0088.1	0.0125
MA0090.1	MA0090.1	3.30941e-5
MA0091.1	MA0091.1	0.8
MA0092.1	MA0092.1	0.485
MA0093.1	MA0093.1	0.25
MA0099.2	MA0099.2	2.93595e-10
MA0100.1	MA0100.1	1.01965e-5
MA0101.1	MA0101.1	0.157
MA0102.2	MA0102.2	0.00321
MA0103.1	MA0103.1	0.0451
MA0104.2	MA0104.2	0.00638
MA0105.1	MA0105.1	0.244
MA0106.1	MA0106.1	0.69
MA0107.1	MA0107.1	0.0476
MA0108.2	MA0108.2	3.38841e-11
MA0111.1	MA0111.1	0.209
MA0112.2	MA0112.2	0.156
MA0113.1	MA0113.1	0.359
MA0114.1	MA0114.1	0.655
MA0115.1	MA0115.1	0.308
MA0116.1	MA0116.1	0.0783
MA0117.1	MA0117.1	0.695
MA0119.1	MA0119.1	0.691
MA0122.1	MA0122.1	0.542
MA0124.1	MA0124.1	0.268
MA0125.1	MA0125.1	0.828
MA0131.1	MA0131.1	0.0384
MA0135.1	MA0135.1	0.0596
MA0136.1	MA0136.1	8.50481e-4
MA0137.2	MA0137.2	0.0437
MA0138.2	MA0138.2	0.408
MA0139.1	MA0139.1	0.304
MA0140.1	MA0140.1	0.0438
MA0141.1	MA0141.1	0.901
MA0142.1	MA0142.1	0.745
MA0143.1	MA0143.1	0.232
MA0144.1	MA0144.1	0.00428
MA0145.1	MA0145.1	0.0809
MA0146.1	MA0146.1	0.594
MA0147.1	MA0147.1	0.00159
MA0148.1	MA0148.1	0.338
MA0149.1	MA0149.1	0.635
MA0150.1	MA0150.1	0.0277
MA0152.1	MA0152.1	0.633
MA0153.1	MA0153.1	0.0435
MA0154.1	MA0154.1	0.897
MA0155.1	MA0155.1	0.57
MA0156.1	MA0156.1	1.92325e-8
MA0157.1	MA0157.1	0.424
MA0159.1	MA0159.1	0.797
MA0160.1	MA0160.1	0.857
MA0162.1	MA0162.1	0.244
MA0163.1	MA0163.1	0.0409
MA0164.1	MA0164.1	0.983
MA0258.1	MA0258.1	0.82
MA0259.1	MA0259.1	0.0223

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10746

Novel motif	Logo	P-value
1	1	0.114
10	10	0.0214
100	100	0.642
101	101	0.245
102	102	0.586
103	103	0.987
104	104	0.756
105	105	0.517
106	106	0.0624
107	107	0.0119
108	108	0.272
109	109	0.633
11	11	0.305
110	110	0.899
111	111	0.14
112	112	0.301
113	113	0.8
114	114	0.797
115	115	0.256
116	116	0.598
117	117	0.042
118	118	0.509
119	119	0.969
12	12	0.856
120	120	0.896
121	121	0.477
122	122	0.882
123	123	4.66501e-4
124	124	0.0773
125	125	0.342
126	126	0.413
127	127	0.981
128	128	0.187
129	129	0.443
13	13	0.285
130	130	0.335
131	131	0.29
132	132	0.532
133	133	0.281
134	134	0.769
135	135	0.861
136	136	0.334
137	137	0.469
138	138	0.816
139	139	0.853
14	14	0.763
140	140	0.679
141	141	0.324
142	142	0.147
143	143	0.123
144	144	0.524
145	145	0.569
146	146	0.73
147	147	0.0358
148	148	0.726
149	149	0.047
15	15	0.0797
150	150	0.994
151	151	0.762
152	152	0.00446
153	153	0.906
154	154	0.766
155	155	0.0213
156	156	0.86
157	157	0.467
158	158	0.0361
159	159	0.635
16	16	0.513
160	160	0.816
161	161	0.0526
162	162	0.69
163	163	0.447
164	164	0.823
165	165	0.465
166	166	0.73
167	167	0.0979
168	168	0.947
169	169	0.157
17	17	0.706
18	18	0.785
19	19	0.0734
2	2	0.39
20	20	0.473
21	21	0.124
22	22	0.376
23	23	0.0461
24	24	0.95
25	25	0.212
26	26	0.544
27	27	0.906
28	28	0.265
29	29	0.124
3	3	0.422
30	30	0.216
31	31	0.393
32	32	0.00136
33	33	0.802
34	34	0.402
35	35	0.0899
36	36	0.243
37	37	0.83
38	38	0.879
39	39	0.0738
4	4	0.337
40	40	0.468
41	41	0.926
42	42	0.117
43	43	0.939
44	44	0.994
45	45	0.324
46	46	0.435
47	47	0.091
48	48	0.334
49	49	0.0984
5	5	0.984
50	50	0.719
51	51	0.642
52	52	0.066
53	53	0.473
54	54	0.626
55	55	0.144
56	56	0.744
57	57	0.419
58	58	0.268
59	59	0.366
6	6	0.372
60	60	0.464
61	61	0.166
62	62	0.28
63	63	0.805
64	64	0.404
65	65	0.337
66	66	0.0075
67	67	0.922
68	68	0.0586
69	69	0.784
7	7	0.264
70	70	0.962
71	71	0.396
72	72	0.615
73	73	0.0156
74	74	0.133
75	75	0.0333
76	76	0.692
77	77	0.0133
78	78	0.257
79	79	0.193
8	8	0.908
80	80	0.229
81	81	0.94
82	82	0.228
83	83	0.665
84	84	0.675
85	85	0.0105
86	86	0.674
87	87	0.733
88	88	0.601
89	89	0.243
9	9	0.573
90	90	0.0485
91	91	0.38
92	92	0.328
93	93	0.911
94	94	0.167
95	95	0.7
96	96	0.262
97	97	0.357
98	98	0.807
99	99	0.138

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10746

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
CL:0000084 T cell
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0101952 HPB-ALL cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000084 (T cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0100741 (lymphocytic leukemia cell line sample)
0101952 (HPB-ALL cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.63!421.30!TCF7;;chr5:170736243..170736279,+!p1@TLX3!2.36!229.08!TLX3;;chr4:109087445..109087463,-!p1@LEF1!2.32!209.80!LEF1;;chr4:109090075..109090095,-!p2@LEF1!2.24!171.45!LEF1;;chr6:135502501..135502546,+!p1@MYB!1.99!114.11!MYB;;chr9:77112244..77112262,+!p1@RORB!1.92!91.70!RORB;;chr5:133451347..133451358,+!p3@TCF7!1.87!72.35!TCF7;;chr4:109089901..109089930,-!p3@LEF1!1.81!63.89!LEF1;;chr5:133450365..133450444,+!p1@TCF7!1.73!229.57!TCF7;;chr5:170736216..170736238,+!p2@TLX3!1.73!52.22!TLX3;;chr8:60031619..60031676,-!p1@TOX!1.70!103.16!TOX;;chr20:42574529..42574563,+!p3@TOX2!1.69!47.74!TOX2;;chr1:25291475..25291511,-!p2@RUNX3!1.68!46.38!RUNX3;;chr10:8096631..8096660,+!p1@GATA3!1.63!49.44!GATA3;;chr2:214014959..214015006,-!p4@IKZF2!1.63!41.40!IKZF2;;chr7:50343634..50343717,+!p2@IKZF1!1.63!41.33!IKZF1;;chr1:23857698..23857733,-!p1@E2F2!1.61!72.07!E2F2;;chr3:18480217..18480239,-!p3@SATB1!1.59!38.27!SATB1;;chr2:172967621..172967637,-!p1@DLX2!1.56!92.84!DLX2;;chr10:8096772..8096787,+!p2@GATA3!1.55!40.34!GATA3;;chr2:214013461..214013517,-!p6@IKZF2!1.55!34.50!IKZF2;;chr2:214015111..214015179,-!p1@IKZF2!1.54!58.62!IKZF2;;chr3:18486354..18486377,-!p2@SATB1!1.54!42.04!SATB1;;chr2:68592406..68592424,+!p1@PLEK!1.53!32.65!PLEK;;chr3:141747459..141747475,-!p1@TFDP2!1.50!246.93!TFDP2;;chr17:37934365..37934387,-!p2@IKZF3!1.50!30.80!IKZF3;;chr4:109089996..109090012,-!p5@LEF1!1.49!30.02!LEF1;;chr6:135502408..135502459,+!p2@MYB!1.47!33.15!MYB;;chr4:109090054..109090073,-!p7@LEF1!1.47!28.60!LEF1;;chr3:141868293..141868355,-!p2@TFDP2!1.45!229.79!TFDP2;;chr7:50344251..50344288,+!p3@IKZF1!1.40!23.83!IKZF1;;chr19:50432453..50432468,+!p1@ATF5!1.37!1198.53!ATF5;;chr21:36421535..36421610,-!p2@RUNX1!1.34!73.49!RUNX1;;chr4:109087906..109087928,-!p12@LEF1!1.33!20.56!LEF1;;chr2:214015343..214015366,-!p3@IKZF2!1.32!19.71!IKZF2;;chr7:44143925..44143970,+!p1@AEBP1!1.29!403.30!AEBP1;;chr21:47063625..47063658,+!p1@PCBP3!1.27!75.48!PCBP3;;chr11:19263160..19263176,-!p1@E2F8!1.25!19.92!E2F8;;chr7:50344289..50344323,+!p1@IKZF1!1.25!16.79!IKZF1;;chr3:141747441..141747452,-!p4@TFDP2!1.24!22.77!TFDP2;;chr4:109089573..109089585,-!p8@LEF1!1.23!16.15!LEF1;;chr16:67063036..67063088,+!p1@CBFB!1.22!243.31!CBFB;;chr4:109086281..109086319,-!p9@LEF1!1.22!15.44!LEF1;;chr13:79177703..79177729,-!p2@POU4F1!1.21!15.08!POU4F1;;chr4:109090106..109090124,-!p10@LEF1!1.20!14.94!LEF1;;chr13:79177674..79177701,-!p1@POU4F1!1.20!14.80!POU4F1;;chr10:8095593..8095625,+!p3@GATA3!1.19!17.07!GATA3;;chr2:68592394..68592405,+!p2@PLEK!1.18!14.01!PLEK;;chr6:135502472..135502489,+!p3@MYB!1.15!13.16!MYB;;chr17:42295777..42295816,-!p7@UBTF!1.14!15.37!UBTF;;chr7:50348268..50348366,+!p4@IKZF1!1.14!12.66!IKZF1;;chr8:60031534..60031553,-!p8@TOX!1.13!12.38!TOX;;chr1:92949331..92949377,-!p2@GFI1!1.12!12.17!GFI1;;chrX:84498989..84499003,+!p1@ZNF711!1.11!16.29!ZNF711;;chr4:109089966..109089977,-!p15@LEF1!1.11!11.81!LEF1;;chr19:22034809..22034878,-!p2@ZNF43!1.10!40.69!ZNF43;;chr9:117150254..117150271,-!p1@AKNA!1.10!32.08!AKNA;;chr1:158979686..158979745,+!p1@IFI16!1.09!374.21!IFI16;;chr7:148581360..148581425,-!p1@EZH2!1.08!54.14!EZH2;;chrX:84499081..84499115,+!p2@ZNF711!1.08!16.22!ZNF711;;chr15:76629123..76629151,+!p1@ISL2!1.08!12.31!ISL2;;chr3:18480173..18480189,-!p6@SATB1!1.08!11.10!SATB1;;chr7:44143978..44143989,+!p2@AEBP1!1.07!19.71!AEBP1;;chr11:19263192..19263222,-!p2@E2F8!1.06!12.81!E2F8;;chr7:50343895..50343936,+!p5@IKZF1!1.06!10.60!IKZF1;;chr4:109086321..109086357,-!p16@LEF1!1.06!10.60!LEF1;;chr17:42295682..42295731,-!p17@UBTF!1.06!10.39!UBTF;;chr2:214016254..214016282,-!p7@IKZF2!1.05!10.24!IKZF2;;chrY:21906594..21906622,-!p1@KDM5D!1.04!10.03!KDM5D;;chr2:42721205..42721307,+!p4@MTA3!1.03!9.60!MTA3;;chr1:151032922..151032951,+!p2@MLLT11!1.01!15.58!MLLT11;;chr5:133450458..133450469,+!p4@TCF7!1.01!9.25!TCF7;;chr8:128748308..128748324,+!p2@MYC!1.00!255.61!MYC;;chr19:20188776..20188826,+!p1@ZNF90!1.00!24.97!ZNF90;;chr4:109090408..109090441,-!p21@LEF1!1.00!8.89!LEF1;;chr20:42295713..42295738,+!p2@MYBL2!0.99!53.07!MYBL2;;chr1:23857674..23857685,-!p3@E2F2!0.99!8.75!E2F2;;chr1:25291620..25291635,-!p4@RUNX3!0.99!8.68!RUNX3;;chr1:92951607..92951661,-!p1@GFI1!0.97!8.32!GFI1;;chr9:77112225..77112238,+!p2@RORB!0.96!8.18!RORB;;chr4:109088940..109089037,-!p4@LEF1!0.96!8.04!LEF1;;chr6:21593973..21593988,+!p1@SOX4!0.95!292.46!SOX4;;chr20:42295745..42295765,+!p1@MYBL2!0.95!133.18!MYBL2;;chr7:64838786..64838809,+!p2@ZNF92!0.95!46.81!ZNF92;;chr19:19976683..19976709,+!p1@ZNF253!0.95!36.14!ZNF253;;chr20:50159198..50159299,-!p1@NFATC2!0.94!11.38!NFATC2;;chr15:56970903..56970914,-!p10@ZNF280D!0.94!7.61!ZNF280D;;chr19:24097675..24097699,+!p1@ZNF726!0.93!25.90!ZNF726;;chr3:141820622..141820635,-!p5@TFDP2!0.93!13.80!TFDP2;;chr4:109088089..109088101,-!p11@LEF1!0.93!7.54!LEF1;;chr13:41593425..41593480,-!p1@ELF1!0.91!47.52!ELF1;;chr19:23433144..23433204,-!p1@ZNF724P!0.91!33.65!ZNF724P;;chr15:57210961..57211012,+!p3@TCF12!0.91!23.76!TCF12;;chr19:2110608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9140..31619152,+!p11@KLF13!0.28!0.92!KLF13;;chr19:12595565..12595576,-!p3@ZNF709!0.28!0.92!ZNF709;;chrX:147582098..147582127,+!p4@AFF2!0.28!0.92!AFF2;;chr21:36421401..36421414,-!p16@RUNX1!0.28!0.92!RUNX1;;chr10:31607335..31607354,+!p5@ZEB1!0.28!0.92!ZEB1;;chr13:100638100..100638115,+!p4@ZIC2!0.28!0.92!ZIC2;;chr22:31742554..31742565,-!p4@PATZ1!0.28!0.92!PATZ1;;chr22:42739533..42739586,-!p2@ENST00000515426!0.28!0.92!TCF20;;chr3:169490834..169490863,+!p4@MYNN!0.28!0.92!MYNN;;chr3:18463329..18463336,-!p15@SATB1!0.28!0.92!SATB1;;chr4:109089050..109089067,-!p26@LEF1!0.28!0.92!LEF1;;chr4:146402827..146402839,+!p10@SMAD1!0.28!0.92!SMAD1;;chr22:42229100..42229146,+!p1@SREBF2!0.27!168.61!SREBF2;;chr1:59249707..59249727,-!p1@JUN!0.27!71.57!JUN;;chr13:46626847..46626899,-!p1@ZC3H13!0.27!51.79!ZC3H13;;chr12:56583243..56583293,-!p1@SMARCC2!0.27!41.19!SMARCC2;;chr4:57774042..57774114,+!p1@REST!0.27!40.76!REST;;chr10:63661437..63661465,+!p2@ARID5B!0.27!31.94!ARID5B;;chr19:57946684..57946723,+!p1@ZNF749!0.27!18.14!ZNF749;;chr19:53935221..53935258,+!p1@ZNF761!0.27!16.29!ZNF761;;chr17:36861496..36861586,+!p1@MLLT6!0.27!15.94!MLLT6;;chr4:47916588..47916607,-!p1@NFXL1!0.27!13.52!NFXL1;;chr5:142784003..142784065,-!p2@NR3C1!0.27!13.37!NR3C1;;chr19:1592714..1592762,-!p1@MBD3!0.27!12.17!MBD3;;chr10:104154246..104154347,+!p3@NFKB2!0.27!9.68!NFKB2;;chr4:140005341..140005411,-!p3@ELF2!0.27!8.39!ELF2;;chr19:58144529..58144579,+!p1@ZNF211!0.27!8.39!ZNF211;;chr17:16557128..16557174,-!p1@ZNF624!0.27!7.04!ZNF624;;chr19:44576296..44576343,+!p2@ZNF284!0.27!5.98!ZNF284;;chr2:242576641..242576731,-!p2@THAP4!0.27!5.83!THAP4;;chr16:67596498..67596520,+!p2@CTCF!0.27!5.41!CTCF;;chr9:128509663..128509715,+!p1@PBX3!0.27!5.05!PBX3;;chr2:208394704..208394715,+!p4@CREB1!0.27!4.70!CREB1;;chr19:53193790..53193821,-!p3@ZNF83!0.27!4.41!ZNF83;;chr19:44809143..44809187,-!p1@ZNF235!0.27!4.34!ZNF235;;chr1:42800848..42800859,-!p2@FOXJ3!0.27!3.91!FOXJ3;;chr10:76586311..76586341,+!p2@KAT6B!0.27!3.91!KAT6B;;chr8:116681123..116681143,-!p4@TRPS1!0.27!2.49!TRPS1;;chr19:38085768..38085821,+!p1@ZNF540!0.27!1.71!ZNF540;;chr8:128752771..128752843,+!p9@MYC!0.27!1.64!MYC;;chr14:24020938..24020988,-!p1@ZFHX2!0.27!1.64!ZFHX2;;chr6:35227247..35227280,+!p3@ZNF76!0.27!1.42!ZNF76;;chr5:133473746..133473764,+!p12@TCF7!0.27!0.85!TCF7;;chr6:135516978..135516993,+!p7@MYB!0.27!0.85!MYB;;chr8:86089531..86089544,+!p7@E2F5!0.27!0.85!E2F5;;chr21:40181951..40181963,+!p6@ETS2!0.27!0.85!ETS2;;chr3:114819101..114819121,-!p7@ZBTB20!0.27!0.85!ZBTB20;;chr4:109087991..109087996,-!p50@LEF1!0.27!0.85!LEF1;;chr19:50435673..50435690,+!p8@ATF5!0.27!0.85!ATF5;;chr19:50922187..50922204,+!p1@SPIB!0.27!0.85!SPIB;;chr19:57791966..57791973,+!p8@ZNF460!0.27!0.85!ZNF460;;chr19:58740449..58740456,+!p3@ZNF544!0.27!0.85!ZNF544;;chr1:26697189..26697205,-!p2@ZNF683!0.27!0.85!ZNF683;;chr1:92950138..92950159,-!p4@GFI1!0.27!0.85!GFI1;;chr10:8097228..8097239,+!p13@GATA3!0.27!0.85!GATA3;;chr13:79177629..79177636,-!p4@POU4F1!0.27!0.85!POU4F1;;chrX:84498946..84498955,+!p4@ZNF711!0.27!0.85!ZNF711;;chrX:118739782..118739829,-!p2@NKRF!0.27!0.85!NKRF;;chrX:131623967..131623978,-!p11@MBNL3!0.27!0.85!MBNL3;;chr7:127032741..127032777,-!p1@ZNF800!0.26!57.34!ZNF800;;chr20:44718538..44718612,-!p1@NCOA5!0.26!44.82!NCOA5;;chr18:47814032..47814079,-!p1@CXXC1!0.26!29.95!CXXC1;;chr19:53606636..53606692,-!p1@ZNF160!0.26!29.88!ZNF160;;chr20:30795511..30795562,-!p1@PLAGL2!0.26!29.67!PLAGL2;;chr1:22778337..22778356,+!p1@ZBTB40!0.26!19.78!ZBTB40;;chr22:42666624..42666673,-!p@chr22:42666624..42666673,-!0.26!17.71!TCF20;;chr14:102786063..102786112,+!p1@ZNF839!0.26!11.24!ZNF839;;chr19:58427951..58427984,-!p1@ZNF417!0.26!10.96!ZNF417;;chr6:151712673..151712709,-!p1@ZBTB2!0.26!8.89!ZBTB2;;chr11:123612319..123612395,-!p1@ZNF202!0.26!8.75!ZNF202;;chr6:28317685..28317761,+!p1@ZKSCAN3!0.26!7.61!ZKSCAN3;;chr19:58090240..58090289,-!p1@ZNF416!0.26!7.40!ZNF416;;chr8:128749984..128750033,+!p4@MYC!0.26!5.19!MYC;;chr7:74072135..74072171,+!p2@GTF2I!0.26!4.34!GTF2I;;
+|ffid_belonging_in_development=CL:0000134,CL:0000051
 |fonse_cell_line=FF:0101035
 |fonse_cell_line_closure=FF:0101035

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FF:10429-106D6: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:57, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0