FF:13437-144E8: Difference between revisions

Revision as of 23:52, 9 July 2012

Name:	iPS differentiation to neuron, control donor C32-CRL1502, day00, rep2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	NA
dev stage	NA
sex	female
age	12wk gestation
cell type	fibroblast-derived iPS
cell line	NA
company	NA
collaboration	Christine Wells (University of Queensland)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0897
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.615
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	1.023
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0664
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.339
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.151
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0778
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0698
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.789
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.906
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.701
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.594
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.147
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0.746
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13839

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00355
MA0003.1	MA0003.1	0.0516
MA0004.1	MA0004.1	0.869
MA0006.1	MA0006.1	0.411
MA0007.1	MA0007.1	0.899
MA0009.1	MA0009.1	0.572
MA0014.1	MA0014.1	0.259
MA0017.1	MA0017.1	0.105
MA0018.2	MA0018.2	0.183
MA0019.1	MA0019.1	0.944
MA0024.1	MA0024.1	1.31685e-6
MA0025.1	MA0025.1	0.984
MA0027.1	MA0027.1	0.352
MA0028.1	MA0028.1	0.0274
MA0029.1	MA0029.1	0.701
MA0030.1	MA0030.1	0.0941
MA0031.1	MA0031.1	0.171
MA0035.2	MA0035.2	0.873
MA0038.1	MA0038.1	0.0172
MA0039.2	MA0039.2	0.0317
MA0040.1	MA0040.1	0.193
MA0041.1	MA0041.1	0.039
MA0042.1	MA0042.1	0.387
MA0043.1	MA0043.1	0.688
MA0046.1	MA0046.1	0.0828
MA0047.2	MA0047.2	0.0521
MA0048.1	MA0048.1	0.274
MA0050.1	MA0050.1	1.24582e-5
MA0051.1	MA0051.1	7.71939e-4
MA0052.1	MA0052.1	0.0107
MA0055.1	MA0055.1	0.143
MA0057.1	MA0057.1	0.304
MA0058.1	MA0058.1	0.917
MA0059.1	MA0059.1	0.563
MA0060.1	MA0060.1	7.68601e-12
MA0061.1	MA0061.1	0.0406
MA0062.2	MA0062.2	0.481
MA0065.2	MA0065.2	0.411
MA0066.1	MA0066.1	0.382
MA0067.1	MA0067.1	0.167
MA0068.1	MA0068.1	0.0267
MA0069.1	MA0069.1	0.631
MA0070.1	MA0070.1	0.507
MA0071.1	MA0071.1	0.69
MA0072.1	MA0072.1	0.866
MA0073.1	MA0073.1	0.89
MA0074.1	MA0074.1	0.746
MA0076.1	MA0076.1	0.096
MA0077.1	MA0077.1	0.0848
MA0078.1	MA0078.1	0.933
MA0079.2	MA0079.2	0.806
MA0080.2	MA0080.2	3.69241e-11
MA0081.1	MA0081.1	0.0809
MA0083.1	MA0083.1	0.0193
MA0084.1	MA0084.1	0.664
MA0087.1	MA0087.1	0.356
MA0088.1	MA0088.1	0.488
MA0090.1	MA0090.1	0.819
MA0091.1	MA0091.1	0.0546
MA0092.1	MA0092.1	0.0827
MA0093.1	MA0093.1	0.997
MA0099.2	MA0099.2	3.99629e-17
MA0100.1	MA0100.1	0.935
MA0101.1	MA0101.1	0.07
MA0102.2	MA0102.2	0.00181
MA0103.1	MA0103.1	0.034
MA0104.2	MA0104.2	0.598
MA0105.1	MA0105.1	0.423
MA0106.1	MA0106.1	0.768
MA0107.1	MA0107.1	0.0355
MA0108.2	MA0108.2	0.00357
MA0111.1	MA0111.1	0.936
MA0112.2	MA0112.2	5.97121e-4
MA0113.1	MA0113.1	0.0146
MA0114.1	MA0114.1	0.687
MA0115.1	MA0115.1	0.666
MA0116.1	MA0116.1	0.661
MA0117.1	MA0117.1	0.418
MA0119.1	MA0119.1	0.00165
MA0122.1	MA0122.1	0.703
MA0124.1	MA0124.1	0.0766
MA0125.1	MA0125.1	0.099
MA0131.1	MA0131.1	0.387
MA0135.1	MA0135.1	0.861
MA0136.1	MA0136.1	4.29728e-9
MA0137.2	MA0137.2	0.0435
MA0138.2	MA0138.2	0.672
MA0139.1	MA0139.1	0.309
MA0140.1	MA0140.1	0.256
MA0141.1	MA0141.1	0.725
MA0142.1	MA0142.1	2.39403e-14
MA0143.1	MA0143.1	3.17892e-5
MA0144.1	MA0144.1	0.0147
MA0145.1	MA0145.1	0.316
MA0146.1	MA0146.1	0.0842
MA0147.1	MA0147.1	0.575
MA0148.1	MA0148.1	0.0221
MA0149.1	MA0149.1	0.16
MA0150.1	MA0150.1	9.58151e-5
MA0152.1	MA0152.1	0.75
MA0153.1	MA0153.1	0.182
MA0154.1	MA0154.1	0.211
MA0155.1	MA0155.1	0.676
MA0156.1	MA0156.1	5.13962e-6
MA0157.1	MA0157.1	0.245
MA0159.1	MA0159.1	0.235
MA0160.1	MA0160.1	0.164
MA0162.1	MA0162.1	0.384
MA0163.1	MA0163.1	0.218
MA0164.1	MA0164.1	0.883
MA0258.1	MA0258.1	0.075
MA0259.1	MA0259.1	0.611

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13839

Novel motif	Logo	P-value
1	1	0.32
10	10	0.516
100	100	0.495
101	101	0.788
102	102	0.59
103	103	0.11
104	104	0.64
105	105	0.0434
106	106	0.0498
107	107	0.29
108	108	0.901
109	109	0.472
11	11	0.353
110	110	0.596
111	111	0.0934
112	112	0.568
113	113	0.0503
114	114	0.0931
115	115	0.0343
116	116	0.601
117	117	0.865
118	118	0.648
119	119	0.278
12	12	0.887
120	120	0.364
121	121	0.448
122	122	0.492
123	123	0.58
124	124	0.165
125	125	0.481
126	126	0.438
127	127	0.394
128	128	0.373
129	129	0.469
13	13	0.652
130	130	0.863
131	131	0.735
132	132	0.911
133	133	0.0689
134	134	0.345
135	135	0.00605
136	136	0.0506
137	137	0.342
138	138	0.126
139	139	0.022
14	14	0.459
140	140	0.241
141	141	0.828
142	142	0.352
143	143	0.0103
144	144	0.612
145	145	0.571
146	146	0.268
147	147	0.687
148	148	0.0997
149	149	0.0976
15	15	0.102
150	150	0.95
151	151	0.0298
152	152	0.365
153	153	0.16
154	154	0.531
155	155	0.899
156	156	0.5
157	157	0.661
158	158	0.101
159	159	0.158
16	16	0.564
160	160	0.498
161	161	0.844
162	162	0.227
163	163	0.407
164	164	0.668
165	165	0.61
166	166	0.867
167	167	0.215
168	168	0.516
169	169	0.00216
17	17	0.225
18	18	0.177
19	19	0.25
2	2	0.414
20	20	0.907
21	21	0.973
22	22	0.0639
23	23	0.00708
24	24	0.949
25	25	0.696
26	26	0.908
27	27	0.42
28	28	0.965
29	29	0.97
3	3	0.263
30	30	0.688
31	31	0.86
32	32	0.268
33	33	0.812
34	34	0.421
35	35	0.414
36	36	0.924
37	37	0.411
38	38	0.309
39	39	0.942
4	4	0.45
40	40	0.542
41	41	0.0763
42	42	0.315
43	43	0.119
44	44	0.335
45	45	0.244
46	46	0.16
47	47	0.707
48	48	0.946
49	49	0.0718
5	5	0.0835
50	50	0.997
51	51	0.539
52	52	0.308
53	53	0.315
54	54	0.33
55	55	0.0277
56	56	0.573
57	57	0.53
58	58	0.105
59	59	0.418
6	6	0.7
60	60	0.0568
61	61	0.746
62	62	0.0568
63	63	0.184
64	64	0.693
65	65	0.0871
66	66	0.681
67	67	0.308
68	68	0.837
69	69	0.669
7	7	0.486
70	70	0.0274
71	71	0.206
72	72	0.417
73	73	0.208
74	74	0.857
75	75	0.451
76	76	0.619
77	77	0.335
78	78	0.637
79	79	0.49
8	8	0.294
80	80	0.0657
81	81	0.439
82	82	0.156
83	83	0.748
84	84	0.725
85	85	0.0632
86	86	0.795
87	87	0.0465
88	88	0.799
89	89	0.198
9	9	0.0806
90	90	0.547
91	91	0.166
92	92	0.0321
93	93	0.235
94	94	0.146
95	95	0.747
96	96	0.0662
97	97	0.514
98	98	0.293
99	99	0.639

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13839

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
FF:0000210 human sample
FF:0200003 iPS differentiation to neuron, control sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)

FF: FANTOM5
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0200005 (iPS differentiation to neuron sample)
0200003 (iPS differentiation to neuron, control sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr20:31350184..31350200,+!p1@DNMT3B!2.67!943.47!DNMT3B;;chr3:181429704..181429722,+!p1@SOX2!2.27!185.70!SOX2;;chr8:128428066..128428078,+!p1@POU5F1B!2.26!182.79!POU5F1B;;chr4:188916918..188916942,+!p1@ZFP42!2.18!151.22!ZFP42;;chr8:73921136..73921151,+!p2@TERF1!2.17!218.11!TERF1;;chr6:31138439..31138475,-!p1@POU5F1!1.98!93.47!POU5F1;;chr8:145701192..145701241,-!p1@FOXH1!1.93!83.50!FOXH1;;chr1:6304233..6304243,+!p1@HES3!1.81!63.15!HES3;;chr1:164528687..164528711,+!p6@PBX1!1.79!69.79!PBX1;;chr16:3149278..3149305,-!p1@ZSCAN10!1.79!60.24!ZSCAN10;;chr12:7941989..7942014,+!p1@NANOG!1.78!59.41!NANOG;;chr14:57272369..57272391,-!p2@OTX2!1.78!59.41!OTX2;;chr9:114287433..114287513,+!p1@ZNF483!1.77!145.82!ZNF483;;chr3:57234000..57234014,-!p1@HESX1!1.73!52.35!HESX1;;chr2:5832508..5832524,+!p1@SOX11!1.69!48.19!SOX11;;chr13:100623375..100623425,-!p1@ZIC5!1.66!44.87!ZIC5;;chr8:70983476..70983493,-!p1@PRDM14!1.65!43.21!PRDM14;;chr3:170076314..170076334,+!p2@SKIL!1.63!54.42!SKIL;;chrX:139587228..139587234,-!p1@SOX3!1.57!36.56!SOX3;;chrX:136648279..136648295,+!p1@ZIC3!1.56!35.31!ZIC3;;chr12:7942020..7942031,+!p2@NANOG!1.54!34.07!NANOG;;chr20:50418972..50419029,-!p1@SALL4!1.53!33.24!SALL4;;chr20:50419055..50419066,-!p3@SALL4!1.50!30.74!SALL4;;chr17:47892398..47892407,+!p2@KAT7!1.50!30.74!KAT7;;chr2:16080659..16080685,+!p1@MYCN!1.50!30.33!MYCN;;chr4:299227..299272,-!p1@ZNF732!1.48!29.50!ZNF732;;chr14:22005197..22005261,-!p3@SALL2!1.47!28.67!SALL2;;chr2:25475094..25475112,-!p3@DNMT3A!1.46!27.83!DNMT3A;;chr17:7493405..7493419,-!p1@SOX15!1.46!27.83!SOX15;;chr11:63684602..63684664,-!p1@RCOR2!1.44!51.51!RCOR2;;chr3:181429741..181429767,+!p2@SOX2!1.43!25.76!SOX2;;chr6:15246200..15246214,+!p2@JARID2!1.41!66.06!JARID2;;chr2:16081912..16081931,+!p2@MYCN!1.38!22.85!MYCN;;chr18:56530136..56530199,+!p3@ZNF532!1.37!33.24!ZNF532;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.60!ZBED1;;chr2:25475120..25475176,-!p2@DNMT3A!1.34!27.83!DNMT3A;;chr19:20188776..20188826,+!p1@ZNF90!1.33!54.01!ZNF90;;chr19:9609272..9609297,-!p1@ZNF560!1.33!20.36!ZNF560;;chr10:70320074..70320106,+!p1@TET1!1.31!38.22!TET1;;chr1:63788229..63788250,+!p1@FOXD3!1.30!19.11!FOXD3;;chr3:71355163..71355209,-!p5@FOXP1!1.29!25.76!FOXP1;;chr13:100634031..100634045,+!p1@ZIC2!1.27!17.45!ZIC2;;chr13:100638100..100638115,+!p4@ZIC2!1.27!17.45!ZIC2;;chr19:12163769..12163798,-!p1@ZNF878!1.26!22.02!ZNF878;;chr8:102504651..102504683,+!p1@GRHL2!1.26!17.03!GRHL2;;chr17:41622765..41622821,-!p2@ETV4!1.24!24.93!ETV4;;chr15:57511609..57511651,+!p2@TCF12!1.23!27.00!TCF12;;chr2:60780753..60780800,-!p1@BCL11A!1.22!76.03!BCL11A;;chr9:127533519..127533573,-!p2@NR6A1!1.21!18.28!NR6A1;;chr19:50922187..50922204,+!p1@SPIB!1.21!15.37!SPIB;;chr20:50418128..50418147,-!p2@SALL4!1.20!14.96!SALL4;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!1.19!31.57!SOHLH2;;chr19:58341656..58341694,+!p5@ZNF587!1.19!17.45!ZNF587;;chr8:145701166..145701187,-!p2@FOXH1!1.19!14.54!FOXH1;;chr7:26191809..26191890,+!p1@NFE2L3!1.18!68.96!NFE2L3;;chr8:40755333..40755352,-!p1@ZMAT4!1.18!14.12!ZMAT4;;chr14:69263043..69263069,-!p8@ZFP36L1!1.17!13.71!ZFP36L1;;chr3:48282587..48282603,+!p1@ZNF589!1.16!59.82!ZNF589;;chr19:20959098..20959117,+!p1@ZNF66P!1.15!54.42!ZNF66P;;chr7:14028743..14028799,-!p3@ETV1!1.14!16.20!ETV1;;chr20:31368212..31368235,+!p2@DNMT3B!1.14!12.88!DNMT3B;;chr17:41623692..41623715,-!p1@ETV4!1.13!53.59!ETV4;;chr6:20402102..20402152,+!p1@E2F3!1.12!50.27!E2F3;;chr19:20011775..20011800,+!p2@ZNF93!1.12!22.02!ZNF93;;chr19:46367576..46367592,+!p1@FOXA3!1.12!12.05!FOXA3;;chr1:201979703..201979721,+!p2@ELF3!1.12!12.05!ELF3;;chr13:100634004..100634025,+!p2@ZIC2!1.12!12.05!ZIC2;;chr14:22005343..22005364,-!p5@SALL2!1.12!12.05!SALL2;;chr10:48355030..48355090,+!p1@ZNF488!1.11!15.37!ZNF488;;chr5:124084493..124084524,-!p2@ZNF608!1.08!24.93!ZNF608;;chr7:64254834..64254854,+!p2@ZNF138!1.08!19.94!ZNF138;;chr12:3068544..3068597,+!p1@TEAD4!1.07!65.64!TEAD4;;chr8:73921067..73921078,+!p3@TERF1!1.07!17.03!TERF1;;chrX:136648297..136648319,+!p3@ZIC3!1.07!10.80!ZIC3;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!1.06!40.30!HNRPK;;chr1:8934931..8934947,-!p4@ENO1!1.06!34.90!ENO1;;chr17:46132044..46132080,+!p4@NFE2L1!1.06!10.39!NFE2L1;;chr2:16082155..16082169,+!p3@MYCN!1.06!10.39!MYCN;;chr19:23433144..23433204,-!p1@ZNF724P!1.05!46.94!ZNF724P;;chr18:56531584..56531646,+!p4@ZNF532!1.05!13.71!ZNF532;;chr12:66218836..66218888,+!p1@HMGA2!1.04!94.30!HMGA2;;chr9:77112244..77112262,+!p1@RORB!1.04!11.22!RORB;;chr10:135043702..135043729,+!p1@UTF1!1.04!9.97!UTF1;;chr10:114710098..114710130,+!p2@TCF7L2!1.03!74.78!TCF7L2;;chr14:21994337..21994442,-!p1@SALL2!1.03!27.00!SALL2;;chr6:21593973..21593988,+!p1@SOX4!1.02!343.57!SOX4;;chr6:21597765..21597779,+!p2@SOX4!1.02!78.10!SOX4;;chr19:23299814..23299844,+!p1@ZNF730!1.02!11.63!ZNF730;;chrX:136648643..136648711,+!p2@ZIC3!1.02!9.56!ZIC3;;chr19:20011744..20011770,+!p1@ZNF93!1.00!35.31!ZNF93;;chrX:84499081..84499115,+!p2@ZNF711!1.00!13.29!ZNF711;;chr19:12203100..12203132,+!p1@ZNF788!0.99!18.28!ZNF788;;chr12:66218378..66218401,+!p6@HMGA2!0.99!13.71!HMGA2;;chr9:127533582..127533615,-!p1@NR6A1!0.99!13.29!NR6A1;;chr19:23299851..23299880,+!p2@ZNF730!0.99!8.72!ZNF730;;chr14:22005018..22005040,-!p6@SALL2!0.99!8.72!SALL2;;chr12:53856284..53856299,+!p3@PCBP2!0.98!25.34!PCBP2;;chr11:6947720..6947812,+!p1@ZNF215!0.98!11.22!ZNF215;;chr6:126070769..126070801,+!p1@HEY2!0.97!9.56!HEY2;;chr10:126138597..126138612,-!p1@NKX1-2!0.97!8.31!NKX1-2;;chr2:16080635..16080650,+!p4@MYCN!0.97!8.31!MYCN;;chr15:74833584..74833626,+!p1@ARID3B!0.95!18.69!ARID3B;;chr8:86089627..86089653,+!p3@E2F5!0.95!9.14!E2F5;;chr1:201979743..201979762,+!p1@ELF3!0.95!7.89!ELF3;;chr2:5832493..5832507,+!p2@SOX11!0.95!7.89!SOX11;;chr19:58400372..58400411,-!p1@ZNF814!0.94!41.13!ZNF814;;chr19:19976714..19976729,+!p3@ZNF253!0.94!14.96!ZNF253;;chr19:24097706..24097731,+!p2@ZNF726!0.94!14.96!ZNF726;;chr6:15245797..15245818,+!p8@JARID2!0.94!9.56!JARID2;;chr2:85360499..85360598,+!p1@TCF7L1!0.93!43.62!TCF7L1;;chr19:22034809..22034878,-!p2@ZNF43!0.93!27.00!ZNF43;;chr2:60778035..60778060,-!p4@BCL11A!0.93!9.14!BCL11A;;chr11:120107344..120107351,+!p1@POU2F3!0.93!9.14!POU2F3;;chr11:128457446..128457461,-!p4@ETS1!0.93!7.48!ETS1;;chr12:7941942..7941949,+!p3@NANOG!0.93!7.48!NANOG;;chr16:30406423..30406447,+!p4@ZNF48!0.93!7.48!ZNF48;;chr6:34204672..34204692,+!p1@HMGA1!0.92!865.36!HMGA1;;chr6:15246217..15246228,+!p3@JARID2!0.92!13.29!JARID2;;chr2:166326200..166326216,+!p1@CSRNP3!0.92!10.80!CSRNP3;;chr6:15246261..15246312,+!p1@JARID2!0.91!182.38!JARID2;;chr20:42295713..42295738,+!p2@MYBL2!0.91!43.62!MYBL2;;chr17:41622731..41622764,-!p5@ETV4!0.91!7.06!ETV4;;chr18:53254566..53254567,-!p8@TCF4!0.90!11.63!TCF4;;chr12:7079780..7079791,-!p2@PHB2!0.89!37.39!PHB2;;chr4:26322267..26322334,+!p3@RBPJ!0.89!17.03!RBPJ;;chr10:114710218..114710229,+!p4@TCF7L2!0.89!13.71!TCF7L2;;chr19:9695169..9695188,-!p1@ZNF121!0.88!121.31!ZNF121;;chr19:53758058..53758088,-!p2@ZNF677!0.88!22.85!ZNF677;;chr19:925727..925784,+!p3@ARID3A!0.88!14.54!ARID3A;;chr19:46800289..46800327,+!p2@HIF3A!0.88!6.65!HIF3A;;chr1:43162358..43162369,+!p11@YBX1!0.88!6.65!YBX1;;chr8:102504690..102504704,+!p3@GRHL2!0.88!6.65!GRHL2;;chr8:70983443..70983460,-!p2@PRDM14!0.88!6.65!PRDM14;;chr19:58400344..58400364,-!p2@ZNF814!0.87!9.56!ZNF814;;chr7:14029283..14029311,-!p1@ETV1!0.86!34.90!ETV1;;chr19:48774586..48774670,+!p1@ZNF114!0.86!7.89!ZNF114;;chr6:31138055..31138073,-!p3@POU5F1!0.86!6.23!POU5F1;;chr8:70983506..70983522,-!p3@PRDM14!0.86!6.23!PRDM14;;chr17:7197911..7197964,-!p1@YBX2!0.86!6.23!YBX2;;chr9:77112225..77112238,+!p2@RORB!0.86!6.23!RORB;;chr12:66358080..66358094,+!p15@HMGA2!0.86!6.23!HMGA2;;chr19:21264991..21265026,+!p1@ZNF714!0.85!41.96!ZNF714;;chr16:29818160..29818188,+!p6@MAZ!0.85!30.33!MAZ;;chr10:114710244..114710257,+!p3@TCF7L2!0.85!17.45!TCF7L2;;chr15:42749722..42749739,-!p2@ZFP106!0.85!11.22!ZFP106;;chr19:21265028..21265052,+!p2@ZNF714!0.85!11.22!ZNF714;;chr16:29818199..29818216,+!p11@MAZ!0.85!10.39!MAZ;;chr3:33482052..33482116,-!p2@UBP1!0.85!9.56!UBP1;;chr19:56671612..56671626,+!p4@ZNF444!0.84!9.56!ZNF444;;chr12:7077134..7077154,-!p3@PHB2!0.84!7.48!PHB2;;chr7:14028488..14028516,-!p2@ETV1!0.84!6.65!ETV1;;chr13:41240737..41240787,-!p1@FOXO1!0.83!73.95!FOXO1;;chr5:138609782..138609826,+!p5@MATR3!0.83!39.88!MATR3;;chr7:64363638..64363667,+!p1@ZNF273!0.83!31.16!ZNF273;;chr3:48282536..48282586,+!p2@ZNF589!0.83!16.62!ZNF589;;chr8:60031682..60031710,-!p2@TOX!0.83!9.56!TOX;;chr13:100623360..100623373,-!p2@ZIC5!0.83!5.82!ZIC5;;chr13:100638124..100638136,+!p7@ZIC2!0.83!5.82!ZIC2;;chr15:85147127..85147142,+!p5@ZSCAN2!0.83!5.82!ZSCAN2;;chr2:42795745..42795824,+!p1@MTA3!0.82!56.08!MTA3;;chr2:60780607..60780624,-!p2@BCL11A!0.82!18.28!BCL11A;;chr14:21994449..21994524,-!p2@SALL2!0.82!17.86!SALL2;;chr19:19779619..19779670,+!p1@ZNF101!0.82!16.62!ZNF101;;chr12:66218183..66218209,+!p4@HMGA2!0.82!11.22!HMGA2;;chr17:41622925..41622976,-!p3@ETV4!0.82!8.72!ETV4;;chrX:84498989..84499003,+!p1@ZNF711!0.82!7.89!ZNF711;;chr12:19592405..19592492,+!p2@AEBP2!0.81!51.10!AEBP2;;chr14:55493763..55493824,-!p1@WDHD1!0.81!44.87!WDHD1;;chr3:141747441..141747452,-!p4@TFDP2!0.81!7.89!TFDP2;;chr14:75746722..75746777,+!p2@FOS!0.81!7.06!FOS;;chr15:85144307..85144329,+!p2@ZSCAN2!0.81!6.23!ZSCAN2;;chr19:47523058..47523114,+!p1@NPAS1!0.81!5.40!NPAS1;;chr19:54024313..54024361,+!p7@ZNF331!0.81!5.40!ZNF331;;chr20:31396411..31396416,+!p15@DNMT3B!0.81!5.40!DNMT3B;;chr22:21771656..21771662,+!p1@HIC2!0.81!5.40!HIC2;;chr3:141747459..141747475,-!p1@TFDP2!0.80!47.78!TFDP2;;chr19:20150268..20150298,-!p2@ZNF682!0.80!10.39!ZNF682;;chr19:23941647..23941672,-!p2@ZNF681!0.80!9.14!ZNF681;;chr1:247171316..247171336,-!p3@ZNF695!0.80!8.31!ZNF695;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.80!7.89!TGIF2;;chr20:32274179..32274213,-!p1@E2F1!0.79!37.39!E2F1;;chr12:80083544..80083558,-!p13@PAWR!0.79!6.65!PAWR;;chr19:52408227..52408243,-!p2@ZNF649!0.78!12.05!ZNF649;;chr17:7492684..7492778,-!p2@SOX15!0.78!11.22!SOX15;;chr22:42269885.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1!0.29!4.15!WHSC1;;chr6:157099036..157099067,+!p5@ARID1B!0.29!3.74!ARID1B;;chr2:70314240..70314256,+!p4@PCBP1!0.29!2.91!PCBP1;;chr6:28303901..28303944,-!p2@ZNF323!0.29!2.08!ZNF323;;chr7:106809470..106809481,+!p2@HBP1!0.29!1.66!HBP1;;chr3:126076264..126076305,-!p2@KLF15!0.29!1.66!KLF15;;chr4:87967965..87967983,+!p16@AFF1!0.29!1.66!AFF1;;chr17:65821795..65821826,+!p3@BPTF!0.29!1.66!BPTF;;chrX:56258844..56258882,+!p1@KLF8!0.29!1.66!KLF8;;chr10:43134047..43134079,-!p3@ZNF33B!0.29!1.66!ZNF33B;;chr20:48807587..48807603,+!p16@CEBPB!0.29!1.25!CEBPB;;chr7:148844498..148844507,+!p6@ZNF398!0.29!1.25!ZNF398;;chr13:45010939..45011033,-!p1@TSC22D1!0.28!114.66!TSC22D1;;chr3:47823298..47823423,-!p1@SMARCC1!0.28!58.99!SMARCC1;;chr11:10879593..10879620,-!p1@ZBED5!0.28!53.59!ZBED5;;chr2:220094514..220094599,+!p1@ANKZF1!0.28!49.85!ANKZF1;;chr6:41040678..41040722,+!p1@NFYA!0.28!34.48!NFYA;;chr16:67876180..67876242,+!p1@THAP11!0.28!28.25!THAP11;;chr19:50169064..50169121,-!p1@IRF3!0.28!23.68!IRF3;;chr1:200379129..200379174,-!p1@ZNF281!0.28!20.36!ZNF281;;chr1:247495140..247495177,-!p1@ZNF496!0.28!18.28!ZNF496;;chr14:90085458..90085557,-!p1@FOXN3!0.28!17.45!FOXN3;;chr19:52901094..52901134,+!p1@ZNF528!0.28!10.80!ZNF528;;chr15:85144229..85144273,+!p1@ZSCAN2!0.28!8.72!ZSCAN2;;chr19:53636125..53636178,-!p1@ZNF415!0.28!4.15!ZNF415;;chr19:37958285..37958317,-!p3@ZNF569!0.28!3.74!ZNF569;;chr14:69262789..69262822,-!p2@ZFP36L1!0.28!3.74!ZFP36L1;;chr19:9879350..9879419,-!p2@ZNF846!0.28!2.91!ZNF846;;chr5:180287681..180287694,-!p2@ZFP62!0.28!2.91!ZFP62;;chrX:134478026..134478052,-!p2@ZNF75D!0.28!2.91!ZNF75D;;chr20:62462566..62462631,-!p1@ZBTB46!0.28!2.49!ZBTB46;;chr1:205592857..205592880,-!p6@ELK4!0.28!2.08!ELK4;;chr15:42743341..42743377,-!p3@ZFP106!0.28!2.08!ZFP106;;chr16:1429674..1429703,-!p3@UNKL!0.28!2.08!UNKL;;chr17:79885633..79885645,-!p4@MAFG!0.28!2.08!MAFG;;chr2:121493492..121493537,+!p2@GLI2!0.28!2.08!GLI2;;chr12:49445907..49445923,-!p2@MLL2!0.28!1.66!MLL2;;chr19:58874112..58874125,-!p1@ZNF497,p5@A1BG!0.28!1.66!ZNF497;;chr1:42800614..42800649,-!p5@FOXJ3!0.28!1.66!FOXJ3;;chr19:47425425..47425441,+!p2@ARHGAP35!0.28!1.25!ARHGAP35;;chr11:130184623..130184634,-!p6@ZBTB44!0.28!1.25!ZBTB44;;chr11:19263160..19263176,-!p1@E2F8!0.28!1.25!E2F8;;chr8:128752850..128752874,+!p12@MYC!0.28!1.25!MYC;;chr1:23885981..23886002,-!p1@ID3!0.27!300.36!ID3;;chr22:31742303..31742350,-!p1@PATZ1!0.27!17.86!PATZ1;;chr4:95128999..95129056,+!p2@SMARCAD1!0.27!17.45!SMARCAD1;;chr19:53898380..53898422,+!p1@ZNF765!0.27!9.56!ZNF765;;chr19:50169013..50169062,-!p2@IRF3!0.27!9.14!IRF3;;chr21:47063625..47063658,+!p1@PCBP3!0.27!6.65!PCBP3;;chr19:44556158..44556206,+!p1@ZNF223!0.27!5.82!ZNF223;;chr7:99647389..99647410,+!p1@ZSCAN21!0.27!5.40!ZSCAN21;;chr6:134274322..134274342,+!p3@TBPL1!0.27!4.57!TBPL1;;chr7:74072135..74072171,+!p2@GTF2I!0.27!4.57!GTF2I;;chr2:42795651..42795676,+!p3@MTA3!0.27!3.74!MTA3;;chr13:45151403..45151433,-!p5@TSC22D1!0.27!2.91!TSC22D1;;chr5:150284420..150284443,-!p2@ZNF300!0.27!2.49!ZNF300;;chr17:61920116..61920131,-!p5@SMARCD2!0.27!2.49!SMARCD2;;chr19:36909484..36909525,-!p2@ZFP82!0.27!2.49!ZFP82;;chr19:58892390..58892404,-!p1@ZNF837!0.27!2.49!ZNF837;;chr19:50168861..50168873,-!p3@IRF3!0.27!2.08!IRF3;;chr19:56904947..56904975,-!p2@ZNF582!0.27!2.08!ZNF582;;chr18:3448422..3448439,+!p11@TGIF1!0.27!1.66!TGIF1;;chr17:41622834..41622883,-!p6@ETV4!0.27!1.25!ETV4;;chr10:44144187..44144201,-!p3@ZNF32!0.27!1.25!ZNF32;;chr11:130184828..130184839,-!p7@ZBTB44!0.27!1.25!ZBTB44;;chr11:19263192..19263222,-!p2@E2F8!0.27!1.25!E2F8;;chr12:53856262..53856278,+!p12@PCBP2!0.27!1.25!PCBP2;;chr5:150284461..150284481,-!p4@ZNF300!0.27!1.25!ZNF300;;chr6:144385698..144385742,-!p2@PLAGL1!0.27!1.25!PLAGL1;;chr3:141868230..141868250,-!p6@TFDP2!0.27!1.25!TFDP2;;chr17:30677160..30677200,+!p1@ZNF207!0.26!237.63!ZNF207;;chr12:10875831..10876025,-!p1@CSDA!0.26!137.10!CSDA;;
+|ffid_belonging_in_development=CL:0000133,CL:0000031,CL:0000221
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:13437-144E8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 23:52, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0