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|top_motifs=NKX2-2,8:2.01040279927;ESR1:1.62568431437;NKX3-2:1.5191748293;MYBL2:1.50747575043;HIF1A:1.45139210157;GZF1:1.44234339541;EVI1:1.43989389346;HMGA1,2:1.41688606046;UFEwm:1.37976755573;ZNF238:1.35635476369;NKX3-1:1.32994566601;KLF4:1.31825373523;HES1:1.23082834498;TAL1_TCF{3,4,12}:1.22939558042;NR3C1:1.20764440669;XBP1:1.20346627226;HOX{A5,B5}:1.1994855598;HBP1_HMGB_SSRP1_UBTF:1.19441187634;SRF:1.14932442852;TEAD1:1.11820372941;HSF1,2:1.07881210353;HAND1,2:1.07579900298;HOX{A4,D4}:1.03037591267;FOXL1:1.01448619935;DBP:0.97540659462;EN1,2:0.964825976746;ALX4:0.891922228493;ATF6:0.855625388987;GFI1B:0.8516463936;TBX4,5:0.837784274829;STAT5{A,B}:0.836317212408;TP53:0.830928548798;PRDM1:0.762953235524;TEF:0.758968920533;PAX1,9:0.755764072887;ZNF384:0.755761211322;AIRE:0.749160901293;MAFB:0.73296883082;NFE2L1:0.71198230907;GATA4:0.684651357926;TFAP4:0.655140541162;SOX17:0.654074152243;GLI1..3:0.65194516147;NKX2-1,4:0.608654951347;NFIX:0.602122895469;TLX1..3_NFIC{dimer}:0.600625473825;CDC5L:0.598766043173;NFATC1..3:0.594251792856;GTF2I:0.565558427806;RXRA_VDR{dimer}:0.547539773806;GCM1,2:0.536688053103;TFAP2{A,C}:0.495323943093;NKX2-3_NKX2-5:0.472228514838;XCPE1{core}:0.46729704867;HLF:0.447049914938;NANOG{mouse}:0.42156659245;MZF1:0.418504704418;MAZ:0.401473151271;RXR{A,B,G}:0.391405101132;PDX1:0.386744817665;NR6A1:0.377162412183;IKZF1:0.363726912265;FOXA2:0.357927373107;GTF2A1,2:0.352357155524;TFCP2:0.336004362366;MTE{core}:0.334152980767;HOX{A6,A7,B6,B7}:0.316711793462;FOXD3:0.316198881121;GFI1:0.28722877307;HMX1:0.281709640436;MYFfamily:0.271820030623;IRF1,2:0.266428481479;ADNP_IRX_SIX_ZHX:0.238641400166;ALX1:0.22904237759;POU5F1:0.224681662796;LHX3,4:0.223456549302;PAX3,7:0.219073977815;EP300:0.216823821292;bHLH_family:0.211624047636;BPTF:0.209809104101;EBF1:0.200093780913;PATZ1:0.1997527959;STAT1,3:0.19402056295;ZBTB6:0.186682647986;TBP:0.181635484487;TFAP2B:0.170051636433;PRRX1,2:0.158113046062;POU3F1..4:0.152874226385;STAT2,4,6:0.14112430076;RREB1:0.138882304917;ZNF423:0.135295913428;NFE2L2:0.12096275977;YY1:0.118431555691;CEBPA,B_DDIT3:0.11532557825;AHR_ARNT_ARNT2:0.106494821654;BACH2:0.0896919161102;TFDP1:0.0685365221796;ZIC1..3:0.0566962687592;FOX{I1,J2}:0.0341169322283;SOX5:0.0299972203365;HIC1:0.0258511279528;FOXO1,3,4:0.0227307543051;NFE2:0.0211308867102;NKX6-1,2:0.0158917945422;FOS_FOS{B,L1}_JUN{B,D}:0.0158159994908;NRF1:0.0155796915298;POU6F1:0.00566648217174;EGR1..3:0.00408467754185;TOPORS:-0.00529351504512;HNF1A:-0.0083845928802;ZBTB16:-0.0224229768065;LEF1_TCF7_TCF7L1,2:-0.0237096858872;ELK1,4_GABP{A,B1}:-0.0481905677468;RUNX1..3:-0.0498341746655;NR1H4:-0.0525442130926;ZFP161:-0.081449708272;SPZ1:-0.0923039990881;ZNF148:-0.110636229157;MEF2{A,B,C,D}:-0.113053596779;MYB:-0.117429495788;CRX:-0.117935427896;SMAD1..7,9:-0.134067927055;PAX5:-0.148565989495;E2F1..5:-0.166601566713;MTF1:-0.169401379907;DMAP1_NCOR{1,2}_SMARC:-0.175616881605;RFX1:-0.195569194857;NHLH1,2:-0.198734673469;PAX8:-0.203006797821;ZNF143:-0.205023316299;MED-1{core}:-0.248850784824;FOX{D1,D2}:-0.277501115861;FOSL2:-0.284671798536;POU1F1:-0.303012043442;REST:-0.313908846274;CDX1,2,4:-0.361685953992;SP1:-0.373200050459;FOXP3:-0.375641225089;NFKB1_REL_RELA:-0.393475078974;ATF5_CREB3:-0.400900921644;HNF4A_NR2F1,2:-0.408362699335;FOXM1:-0.421574290991;JUN:-0.440457198905;CREB1:-0.446615419769;SPI1:-0.45368037478;ELF1,2,4:-0.454843700349;RBPJ:-0.457396306966;TLX2:-0.466536421092;ONECUT1,2:-0.468966867141;TGIF1:-0.48107777883;AR:-0.486801576718;PAX4:-0.487817425803;SOX2:-0.504430732485;BREu{core}:-0.532385412883;ATF2:-0.565648921026;VSX1,2:-0.566546286833;T:-0.583360306478;PAX2:-0.587879231685;IRF7:-0.597267731948;NR5A1,2:-0.597335417541;ARID5B:-0.600007137073;ETS1,2:-0.612266526731;ESRRA:-0.623670327532;NFIL3:-0.626067887235;SREBF1,2:-0.638688716373;SPIB:-0.657452143092;PPARG:-0.671363007496;ATF4:-0.682100041565;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.696303333605;FOXN1:-0.696493152271;PAX6:-0.708048620191;GATA6:-0.742520649021;CUX2:-0.74696863932;OCT4_SOX2{dimer}:-0.792584091307;NFY{A,B,C}:-0.809264797549;SNAI1..3:-0.847036559825;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.862793125122;PBX1:-0.883387215928;FOXP1:-0.892270818063;PITX1..3:-0.895571535119;RORA:-0.901641833661;ZEB1:-0.926893599128;LMO2:-0.934545778648;POU2F1..3:-0.969252389232;RFX2..5_RFXANK_RFXAP:-0.975420502112;FOXQ1:-0.997409028142;IKZF2:-1.0136791229;HOXA9_MEIS1:-1.03097085845;FOX{F1,F2,J1}:-1.03349711562;SOX{8,9,10}:-1.18762099185;NANOG:-1.32215453619;MYOD1:-1.45636975573
|top_motifs=NKX2-2,8:2.01040279927;ESR1:1.62568431437;NKX3-2:1.5191748293;MYBL2:1.50747575043;HIF1A:1.45139210157;GZF1:1.44234339541;EVI1:1.43989389346;HMGA1,2:1.41688606046;UFEwm:1.37976755573;ZNF238:1.35635476369;NKX3-1:1.32994566601;KLF4:1.31825373523;HES1:1.23082834498;TAL1_TCF{3,4,12}:1.22939558042;NR3C1:1.20764440669;XBP1:1.20346627226;HOX{A5,B5}:1.1994855598;HBP1_HMGB_SSRP1_UBTF:1.19441187634;SRF:1.14932442852;TEAD1:1.11820372941;HSF1,2:1.07881210353;HAND1,2:1.07579900298;HOX{A4,D4}:1.03037591267;FOXL1:1.01448619935;DBP:0.97540659462;EN1,2:0.964825976746;ALX4:0.891922228493;ATF6:0.855625388987;GFI1B:0.8516463936;TBX4,5:0.837784274829;STAT5{A,B}:0.836317212408;TP53:0.830928548798;PRDM1:0.762953235524;TEF:0.758968920533;PAX1,9:0.755764072887;ZNF384:0.755761211322;AIRE:0.749160901293;MAFB:0.73296883082;NFE2L1:0.71198230907;GATA4:0.684651357926;TFAP4:0.655140541162;SOX17:0.654074152243;GLI1..3:0.65194516147;NKX2-1,4:0.608654951347;NFIX:0.602122895469;TLX1..3_NFIC{dimer}:0.600625473825;CDC5L:0.598766043173;NFATC1..3:0.594251792856;GTF2I:0.565558427806;RXRA_VDR{dimer}:0.547539773806;GCM1,2:0.536688053103;TFAP2{A,C}:0.495323943093;NKX2-3_NKX2-5:0.472228514838;XCPE1{core}:0.46729704867;HLF:0.447049914938;NANOG{mouse}:0.42156659245;MZF1:0.418504704418;MAZ:0.401473151271;RXR{A,B,G}:0.391405101132;PDX1:0.386744817665;NR6A1:0.377162412183;IKZF1:0.363726912265;FOXA2:0.357927373107;GTF2A1,2:0.352357155524;TFCP2:0.336004362366;MTE{core}:0.334152980767;HOX{A6,A7,B6,B7}:0.316711793462;FOXD3:0.316198881121;GFI1:0.28722877307;HMX1:0.281709640436;MYFfamily:0.271820030623;IRF1,2:0.266428481479;ADNP_IRX_SIX_ZHX:0.238641400166;ALX1:0.22904237759;POU5F1:0.224681662796;LHX3,4:0.223456549302;PAX3,7:0.219073977815;EP300:0.216823821292;bHLH_family:0.211624047636;BPTF:0.209809104101;EBF1:0.200093780913;PATZ1:0.1997527959;STAT1,3:0.19402056295;ZBTB6:0.186682647986;TBP:0.181635484487;TFAP2B:0.170051636433;PRRX1,2:0.158113046062;POU3F1..4:0.152874226385;STAT2,4,6:0.14112430076;RREB1:0.138882304917;ZNF423:0.135295913428;NFE2L2:0.12096275977;YY1:0.118431555691;CEBPA,B_DDIT3:0.11532557825;AHR_ARNT_ARNT2:0.106494821654;BACH2:0.0896919161102;TFDP1:0.0685365221796;ZIC1..3:0.0566962687592;FOX{I1,J2}:0.0341169322283;SOX5:0.0299972203365;HIC1:0.0258511279528;FOXO1,3,4:0.0227307543051;NFE2:0.0211308867102;NKX6-1,2:0.0158917945422;FOS_FOS{B,L1}_JUN{B,D}:0.0158159994908;NRF1:0.0155796915298;POU6F1:0.00566648217174;EGR1..3:0.00408467754185;TOPORS:-0.00529351504512;HNF1A:-0.0083845928802;ZBTB16:-0.0224229768065;LEF1_TCF7_TCF7L1,2:-0.0237096858872;ELK1,4_GABP{A,B1}:-0.0481905677468;RUNX1..3:-0.0498341746655;NR1H4:-0.0525442130926;ZFP161:-0.081449708272;SPZ1:-0.0923039990881;ZNF148:-0.110636229157;MEF2{A,B,C,D}:-0.113053596779;MYB:-0.117429495788;CRX:-0.117935427896;SMAD1..7,9:-0.134067927055;PAX5:-0.148565989495;E2F1..5:-0.166601566713;MTF1:-0.169401379907;DMAP1_NCOR{1,2}_SMARC:-0.175616881605;RFX1:-0.195569194857;NHLH1,2:-0.198734673469;PAX8:-0.203006797821;ZNF143:-0.205023316299;MED-1{core}:-0.248850784824;FOX{D1,D2}:-0.277501115861;FOSL2:-0.284671798536;POU1F1:-0.303012043442;REST:-0.313908846274;CDX1,2,4:-0.361685953992;SP1:-0.373200050459;FOXP3:-0.375641225089;NFKB1_REL_RELA:-0.393475078974;ATF5_CREB3:-0.400900921644;HNF4A_NR2F1,2:-0.408362699335;FOXM1:-0.421574290991;JUN:-0.440457198905;CREB1:-0.446615419769;SPI1:-0.45368037478;ELF1,2,4:-0.454843700349;RBPJ:-0.457396306966;TLX2:-0.466536421092;ONECUT1,2:-0.468966867141;TGIF1:-0.48107777883;AR:-0.486801576718;PAX4:-0.487817425803;SOX2:-0.504430732485;BREu{core}:-0.532385412883;ATF2:-0.565648921026;VSX1,2:-0.566546286833;T:-0.583360306478;PAX2:-0.587879231685;IRF7:-0.597267731948;NR5A1,2:-0.597335417541;ARID5B:-0.600007137073;ETS1,2:-0.612266526731;ESRRA:-0.623670327532;NFIL3:-0.626067887235;SREBF1,2:-0.638688716373;SPIB:-0.657452143092;PPARG:-0.671363007496;ATF4:-0.682100041565;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.696303333605;FOXN1:-0.696493152271;PAX6:-0.708048620191;GATA6:-0.742520649021;CUX2:-0.74696863932;OCT4_SOX2{dimer}:-0.792584091307;NFY{A,B,C}:-0.809264797549;SNAI1..3:-0.847036559825;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.862793125122;PBX1:-0.883387215928;FOXP1:-0.892270818063;PITX1..3:-0.895571535119;RORA:-0.901641833661;ZEB1:-0.926893599128;LMO2:-0.934545778648;POU2F1..3:-0.969252389232;RFX2..5_RFXANK_RFXAP:-0.975420502112;FOXQ1:-0.997409028142;IKZF2:-1.0136791229;HOXA9_MEIS1:-1.03097085845;FOX{F1,F2,J1}:-1.03349711562;SOX{8,9,10}:-1.18762099185;NANOG:-1.32215453619;MYOD1:-1.45636975573
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11557-120C9;search_select_hide=table117:FF:11557-120C9
}}
}}

Latest revision as of 18:09, 4 June 2020

Name:Fibroblast - skin dystrophia myotonica, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11354
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskin
dev stageNA
sexM
age50 year old adult
cell typefibroblast
cell lineNA
companyCoriell
collaborationSplicing (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numbercustom
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005436
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11354 CAGE DRX008285 DRR009157
Accession ID Hg19

Library idBAMCTSS
CNhs11354 DRZ000582 DRZ001967
Accession ID Hg38

Library idBAMCTSS
CNhs11354 DRZ011932 DRZ013317
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0214
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0297
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.753
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0331
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.024
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0835
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.549
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.00784
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.494
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.331
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.523
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.431
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0298
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.00105
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.132
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.158
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0835
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.464
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.447
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.619
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.549
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.736
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.799
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11354

Jaspar motifP-value
MA0002.20.471
MA0003.10.863
MA0004.10.0252
MA0006.10.506
MA0007.10.575
MA0009.10.284
MA0014.10.24
MA0017.10.397
MA0018.22.45197e-6
MA0019.10.769
MA0024.10.00643
MA0025.10.014
MA0027.10.824
MA0028.10.194
MA0029.10.341
MA0030.10.177
MA0031.10.291
MA0035.20.0154
MA0038.10.0182
MA0039.20.00456
MA0040.10.316
MA0041.10.772
MA0042.10.866
MA0043.14.60705e-4
MA0046.10.728
MA0047.20.413
MA0048.10.0173
MA0050.10.18
MA0051.10.827
MA0052.10.544
MA0055.10.756
MA0057.10.308
MA0058.10.00364
MA0059.10.568
MA0060.11.43701e-8
MA0061.10.0541
MA0062.21.84763e-6
MA0065.20.327
MA0066.10.512
MA0067.10.00554
MA0068.10.366
MA0069.10.0692
MA0070.10.76
MA0071.10.75
MA0072.10.392
MA0073.10.653
MA0074.10.503
MA0076.10.104
MA0077.10.0517
MA0078.10.681
MA0079.20.0764
MA0080.21.20892e-8
MA0081.10.0136
MA0083.10.00461
MA0084.10.921
MA0087.10.989
MA0088.10.911
MA0090.11.24864e-5
MA0091.10.0799
MA0092.10.0168
MA0093.10.0377
MA0099.20.315
MA0100.10.567
MA0101.19.10444e-4
MA0102.20.533
MA0103.16.45547e-5
MA0104.20.0521
MA0105.10.262
MA0106.10.0129
MA0107.10.00309
MA0108.20.214
MA0111.10.081
MA0112.20.00768
MA0113.10.447
MA0114.10.282
MA0115.10.198
MA0116.10.541
MA0117.10.974
MA0119.10.271
MA0122.10.75
MA0124.10.868
MA0125.10.329
MA0131.10.971
MA0135.10.0517
MA0136.11.01745e-9
MA0137.20.908
MA0138.20.612
MA0139.10.962
MA0140.10.163
MA0141.10.855
MA0142.10.228
MA0143.10.585
MA0144.10.906
MA0145.10.246
MA0146.10.698
MA0147.10.369
MA0148.10.785
MA0149.10.927
MA0150.10.0928
MA0152.10.0251
MA0153.10.245
MA0154.10.799
MA0155.10.833
MA0156.13.13762e-6
MA0157.10.868
MA0159.10.865
MA0160.10.0546
MA0162.10.278
MA0163.10.0383
MA0164.10.826
MA0258.10.798
MA0259.10.69



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11354

Novel motifP-value
10.953
100.65
1000.88
1010.477
1020.0443
1030.949
1040.787
1050.162
1060.64
1070.67
1080.45
1090.409
110.675
1100.965
1110.497
1120.553
1130.00249
1140.478
1150.582
1160.266
1170.28
1180.66
1190.318
120.375
1200.738
1210.765
1220.0717
1234.30511e-4
1240.803
1250.414
1260.898
1270.947
1280.815
1290.378
130.82
1300.426
1310.97
1320.363
1330.196
1340.273
1350.238
1360.0796
1370.159
1380.827
1390.917
140.196
1400.347
1410.187
1420.858
1430.966
1440.331
1450.558
1460.688
1470.0737
1480.401
1490.0186
150.615
1500.382
1510.841
1520.732
1530.247
1540.583
1550.0528
1560.653
1570.658
1580.00715
1590.844
160.0333
1600.263
1610.196
1620.534
1630.677
1640.469
1650.501
1660.148
1670.686
1680.865
1690.0532
170.55
180.046
190.00764
20.541
200.363
210.0225
220.282
230.164
240.308
250.356
260.836
270.836
280.298
290.849
30.572
300.211
310.657
329.06456e-14
330.543
340.773
350.967
360.122
370.146
380.271
390.354
40.541
400.123
410.686
420.642
430.987
440.502
450.396
460.772
470.422
480.425
490.774
50.506
500.549
510.711
520.838
530.112
540.723
550.175
560.921
570.959
580.192
590.307
60.947
600.493
610.579
620.967
630.583
640.381
650.937
660.289
670.694
680.993
690.962
70.217
700.746
710.331
720.966
730.431
740.0727
750.929
760.688
770.154
780.262
790.0516
80.56
800.497
810.891
820.704
830.314
840.28
850.742
860.691
870.971
880.591
890.0883
90.866
900.778
910.984
920.153
930.737
940.209
950.747
960.927
970.703
980.148
990.0106



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11354


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)

DOID: Disease
4 (disease)
17 (musculoskeletal system disease)
450 (myotonic disease)
7 (disease of anatomical entity)
66 (muscle tissue disease)
423 (myopathy)
0080000 (muscular disease)
11722 (myotonic dystrophy)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000253 (human fibroblast- skin dystrophia myotonica sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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