FF:10432-106D9: Difference between revisions

Revision as of 18:58, 9 July 2012

Name:	bile duct carcinoma cell line:HuCCT1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	bile duct
dev stage	56 year old adult
sex	unknown
age	56
cell type	duct cell, bile duct
cell line	HuCCT1
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0312
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.549
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.447
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0202
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.02
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0691
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0.0187
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.196
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.263
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.474
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.059
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0148
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.0718
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.00541
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.506
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0374
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0374
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10750

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.302
MA0003.1	MA0003.1	0.396
MA0004.1	MA0004.1	0.889
MA0006.1	MA0006.1	0.485
MA0007.1	MA0007.1	0.488
MA0009.1	MA0009.1	0.179
MA0014.1	MA0014.1	0.0352
MA0017.1	MA0017.1	0.676
MA0018.2	MA0018.2	0.362
MA0019.1	MA0019.1	0.166
MA0024.1	MA0024.1	1.01958e-4
MA0025.1	MA0025.1	0.698
MA0027.1	MA0027.1	0.37
MA0028.1	MA0028.1	1.57796e-6
MA0029.1	MA0029.1	0.317
MA0030.1	MA0030.1	0.13
MA0031.1	MA0031.1	0.512
MA0035.2	MA0035.2	0.00962
MA0038.1	MA0038.1	0.134
MA0039.2	MA0039.2	0.00314
MA0040.1	MA0040.1	0.418
MA0041.1	MA0041.1	0.929
MA0042.1	MA0042.1	0.535
MA0043.1	MA0043.1	0.93
MA0046.1	MA0046.1	0.00122
MA0047.2	MA0047.2	0.042
MA0048.1	MA0048.1	0.35
MA0050.1	MA0050.1	0.0784
MA0051.1	MA0051.1	6.79664e-4
MA0052.1	MA0052.1	0.478
MA0055.1	MA0055.1	0.0035
MA0057.1	MA0057.1	0.51
MA0058.1	MA0058.1	0.673
MA0059.1	MA0059.1	0.58
MA0060.1	MA0060.1	6.95478e-5
MA0061.1	MA0061.1	0.613
MA0062.2	MA0062.2	4.58742e-6
MA0065.2	MA0065.2	0.784
MA0066.1	MA0066.1	0.588
MA0067.1	MA0067.1	0.0928
MA0068.1	MA0068.1	0.0334
MA0069.1	MA0069.1	0.79
MA0070.1	MA0070.1	0.522
MA0071.1	MA0071.1	0.23
MA0072.1	MA0072.1	0.747
MA0073.1	MA0073.1	0.46
MA0074.1	MA0074.1	0.635
MA0076.1	MA0076.1	1.96464e-4
MA0077.1	MA0077.1	0.687
MA0078.1	MA0078.1	0.646
MA0079.2	MA0079.2	0.804
MA0080.2	MA0080.2	0.188
MA0081.1	MA0081.1	0.622
MA0083.1	MA0083.1	0.0366
MA0084.1	MA0084.1	0.152
MA0087.1	MA0087.1	0.898
MA0088.1	MA0088.1	0.631
MA0090.1	MA0090.1	0.00175
MA0091.1	MA0091.1	0.00135
MA0092.1	MA0092.1	0.307
MA0093.1	MA0093.1	0.83
MA0099.2	MA0099.2	2.71604e-11
MA0100.1	MA0100.1	0.335
MA0101.1	MA0101.1	0.628
MA0102.2	MA0102.2	0.896
MA0103.1	MA0103.1	3.64938e-9
MA0104.2	MA0104.2	0.148
MA0105.1	MA0105.1	0.0186
MA0106.1	MA0106.1	0.806
MA0107.1	MA0107.1	0.529
MA0108.2	MA0108.2	0.429
MA0111.1	MA0111.1	0.808
MA0112.2	MA0112.2	0.512
MA0113.1	MA0113.1	0.0346
MA0114.1	MA0114.1	0.282
MA0115.1	MA0115.1	0.251
MA0116.1	MA0116.1	0.208
MA0117.1	MA0117.1	0.311
MA0119.1	MA0119.1	0.904
MA0122.1	MA0122.1	0.727
MA0124.1	MA0124.1	0.462
MA0125.1	MA0125.1	0.466
MA0131.1	MA0131.1	0.262
MA0135.1	MA0135.1	0.394
MA0136.1	MA0136.1	0.44
MA0137.2	MA0137.2	0.321
MA0138.2	MA0138.2	0.0246
MA0139.1	MA0139.1	0.374
MA0140.1	MA0140.1	0.117
MA0141.1	MA0141.1	0.413
MA0142.1	MA0142.1	0.748
MA0143.1	MA0143.1	0.173
MA0144.1	MA0144.1	0.644
MA0145.1	MA0145.1	0.661
MA0146.1	MA0146.1	0.374
MA0147.1	MA0147.1	0.0592
MA0148.1	MA0148.1	0.0667
MA0149.1	MA0149.1	0.0943
MA0150.1	MA0150.1	0.168
MA0152.1	MA0152.1	0.181
MA0153.1	MA0153.1	3.56894e-4
MA0154.1	MA0154.1	0.0851
MA0155.1	MA0155.1	0.0122
MA0156.1	MA0156.1	0.0172
MA0157.1	MA0157.1	0.472
MA0159.1	MA0159.1	0.505
MA0160.1	MA0160.1	0.709
MA0162.1	MA0162.1	0.973
MA0163.1	MA0163.1	0.0124
MA0164.1	MA0164.1	0.753
MA0258.1	MA0258.1	0.0418
MA0259.1	MA0259.1	0.615

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10750

Novel motif	Logo	P-value
1	1	0.688
10	10	0.77
100	100	0.306
101	101	0.167
102	102	0.641
103	103	0.52
104	104	0.791
105	105	0.4
106	106	0.912
107	107	0.638
108	108	0.922
109	109	0.117
11	11	0.0887
110	110	0.705
111	111	0.802
112	112	0.0492
113	113	0.0269
114	114	0.307
115	115	0.236
116	116	0.147
117	117	0.694
118	118	0.976
119	119	0.232
12	12	0.595
120	120	0.549
121	121	0.139
122	122	0.215
123	123	0.771
124	124	0.365
125	125	0.309
126	126	0.683
127	127	0.996
128	128	0.00119
129	129	0.365
13	13	0.0545
130	130	0.118
131	131	0.41
132	132	0.9
133	133	0.0588
134	134	0.468
135	135	0.0301
136	136	0.0151
137	137	0.27
138	138	0.884
139	139	0.0622
14	14	0.77
140	140	0.646
141	141	0.0717
142	142	0.787
143	143	0.0846
144	144	0.159
145	145	0.395
146	146	0.606
147	147	0.781
148	148	0.993
149	149	0.149
15	15	0.76
150	150	0.537
151	151	0.743
152	152	0.618
153	153	0.291
154	154	0.769
155	155	0.276
156	156	0.186
157	157	0.453
158	158	0.357
159	159	0.58
16	16	0.695
160	160	0.585
161	161	0.935
162	162	0.203
163	163	0.611
164	164	0.722
165	165	0.37
166	166	0.49
167	167	0.965
168	168	0.29
169	169	0.986
17	17	0.614
18	18	0.188
19	19	0.2
2	2	0.629
20	20	0.0779
21	21	0.253
22	22	0.154
23	23	0.0849
24	24	0.415
25	25	0.852
26	26	0.36
27	27	0.637
28	28	0.487
29	29	0.3
3	3	0.23
30	30	0.609
31	31	0.194
32	32	1.84694e-4
33	33	0.12
34	34	0.165
35	35	0.106
36	36	0.546
37	37	0.461
38	38	0.985
39	39	0.57
4	4	0.918
40	40	0.452
41	41	0.213
42	42	0.91
43	43	0.161
44	44	0.441
45	45	0.974
46	46	0.273
47	47	0.992
48	48	0.589
49	49	0.178
5	5	0.33
50	50	0.176
51	51	0.561
52	52	0.75
53	53	0.525
54	54	0.409
55	55	0.782
56	56	0.713
57	57	0.833
58	58	0.759
59	59	0.33
6	6	0.493
60	60	0.877
61	61	0.293
62	62	0.179
63	63	0.222
64	64	0.303
65	65	0.184
66	66	0.0266
67	67	0.881
68	68	0.00293
69	69	0.438
7	7	0.492
70	70	0.142
71	71	0.533
72	72	0.231
73	73	0.585
74	74	0.898
75	75	0.531
76	76	0.514
77	77	0.745
78	78	0.106
79	79	0.0013
8	8	0.391
80	80	0.253
81	81	0.0242
82	82	3.57767e-5
83	83	0.164
84	84	0.576
85	85	0.0057
86	86	0.717
87	87	0.0119
88	88	0.523
89	89	0.255
9	9	0.127
90	90	0.477
91	91	0.122
92	92	0.088
93	93	0.759
94	94	0.0963
95	95	0.283
96	96	0.122
97	97	0.621
98	98	0.343
99	99	0.646

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10750

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100297 carcinoma cell line sample
FF:0103911 HuCCT-1 cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002394 (bile duct)
0000058 (duct)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003928 (digestive system duct)
0010317 (germ layer / neural crest derived structure)
0002294 (biliary system)
0001173 (biliary tree)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0103910 (bile duct cancer cell line sample)
0103911 (HuCCT-1 cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0009497 (epithelium of foregut-midgut junction)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.37!233.75!EHF;;chr11:65686802..65686818,+!p6@DRAP1!1.65!75.13!DRAP1;;chr1:201979743..201979762,+!p1@ELF3!1.64!42.51!ELF3;;chr11:65686732..65686756,+!p2@DRAP1!1.53!134.89!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!1.52!120.78!FOSL1;;chr1:201979703..201979721,+!p2@ELF3!1.52!31.81!ELF3;;chr6:1312325..1312340,+!p1@FOXQ1!1.49!47.99!FOXQ1;;chr8:102504651..102504683,+!p1@GRHL2!1.47!28.31!GRHL2;;chr11:34642656..34642667,+!p2@EHF!1.43!25.88!EHF;;chr11:65667846..65667868,-!p1@FOSL1!1.41!627.28!FOSL1;;chr17:46682321..46682362,-!p1@HOXB6!1.41!24.89!HOXB6;;chr1:209979467..209979494,-!p1@IRF6!1.37!25.43!IRF6;;chr3:111314186..111314204,-!p1@ZBED2!1.36!22.11!ZBED2;;chr12:66218255..66218304,+!p3@HMGA2!1.33!53.92!HMGA2;;chr6:34204921..34204939,+!p3@HMGA1!1.30!557.27!HMGA1;;chr11:34645791..34645836,+!p3@EHF!1.30!19.14!EHF;;chr12:66218598..66218645,+!p2@HMGA2!1.27!80.34!HMGA2;;chr21:36421535..36421610,-!p2@RUNX1!1.26!60.12!RUNX1;;chr8:67525443..67525459,-!p2@MYBL1!1.26!25.70!MYBL1;;chr11:65668011..65668020,-!p3@FOSL1!1.26!17.16!FOSL1;;chr8:10588010..10588030,-!p1@SOX7!1.26!17.07!SOX7;;chr15:67418119..67418162,+!p5@SMAD3!1.24!18.15!SMAD3;;chr11:128457446..128457461,-!p4@ETS1!1.19!14.65!ETS1;;chr14:75988771..75988826,+!p1@BATF!1.18!18.78!BATF;;chr3:12330560..12330579,+!p1@PPARG!1.16!15.28!PPARG;;chr18:19749541..19749557,+!p1@GATA6!1.12!38.19!GATA6;;chr12:80084737..80084763,-!p3@PAWR!1.11!44.31!PAWR;;chr15:67418047..67418093,+!p4@SMAD3!1.11!15.01!SMAD3;;chr11:120107344..120107351,+!p1@POU2F3!1.10!14.11!POU2F3;;chr20:22564895..22564910,-!p1@FOXA2!1.10!11.50!FOXA2;;chr11:65686776..65686787,+!p9@DRAP1!1.09!13.30!DRAP1;;chr5:134369905..134369972,-!p1@PITX1!1.08!16.90!PITX1;;chr12:27485762..27485776,+!p3@ARNTL2!1.04!27.23!ARNTL2;;chr13:73633131..73633149,+!p1@KLF5!1.02!101.64!KLF5;;chr12:66218212..66218244,+!p5@HMGA2!1.00!13.21!HMGA2;;chr12:77459306..77459365,-!p1@E2F7!0.99!112.96!E2F7;;chr20:50159198..50159299,-!p1@NFATC2!0.99!12.94!NFATC2;;chr17:70117153..70117174,+!p1@SOX9!0.98!91.04!SOX9;;chr17:46675558..46675577,-!p2@HOXB6!0.98!8.45!HOXB6;;chr11:65554528..65554546,+!p1@OVOL1!0.96!8.09!OVOL1;;chr12:66218183..66218209,+!p4@HMGA2!0.95!15.55!HMGA2;;chr11:129245526..129245553,+!p1@BARX2!0.95!7.91!BARX2;;chr12:2986275..2986363,-!p1@FOXM1!0.94!79.26!FOXM1;;chr7:26191809..26191890,+!p1@NFE2L3!0.94!39.36!NFE2L3;;chr5:134369879..134369898,-!p2@PITX1!0.94!7.73!PITX1;;chr8:102504690..102504704,+!p3@GRHL2!0.94!7.73!GRHL2;;chr17:41277372..41277418,-!p1@BRCA1!0.92!27.59!BRCA1;;chr11:61520075..61520136,+!p1@C11orf9!0.92!16.09!C11orf9;;chr6:10415276..10415341,-!p2@TFAP2A!0.91!8.81!TFAP2A;;chr11:65554563..65554576,+!p2@OVOL1!0.91!7.10!OVOL1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.90!64.08!PPP1R13L;;chr8:102504979..102505010,+!p2@GRHL2!0.90!6.92!GRHL2;;chr12:66218378..66218401,+!p6@HMGA2!0.88!10.51!HMGA2;;chr6:10413188..10413249,-!p7@TFAP2A!0.88!6.56!TFAP2A;;chr3:168864315..168864339,-!p2@MECOM!0.87!10.87!MECOM;;chr17:41623692..41623715,-!p1@ETV4!0.86!27.86!ETV4;;chr18:19749386..19749404,+!p2@GATA6!0.86!9.08!GATA6;;chr12:66218836..66218888,+!p1@HMGA2!0.85!60.75!HMGA2;;chr15:96869255..96869291,+!p6@NR2F2!0.85!11.50!NR2F2;;chr15:67418177..67418204,+!p9@SMAD3!0.85!6.02!SMAD3;;chr14:38064429..38064486,-!p1@FOXA1!0.84!5.93!FOXA1;;chr1:209979411..209979433,-!p2@IRF6!0.84!5.84!IRF6;;chr20:22565185..22565223,-!p3@FOXA2!0.83!5.75!FOXA2;;chr6:10415484..10415508,-!p3@TFAP2A!0.82!5.66!TFAP2A;;chr6:34204672..34204692,+!p1@HMGA1!0.80!644.36!HMGA1;;chr12:80084303..80084332,-!p1@PAWR!0.79!33.43!PAWR;;chr12:66218003..66218018,+!p9@HMGA2!0.79!6.47!HMGA2;;chrY:2803415..2803468,+!p1@ZFY!0.79!5.12!ZFY;;chr3:193853927..193853944,+!p1@HES1!0.78!181.53!HES1;;chr14:62162285..62162296,+!p3@HIF1A!0.78!28.67!HIF1A;;chr15:96869511..96869525,+!p16@NR2F2!0.78!5.66!NR2F2;;chrY:21906594..21906622,-!p1@KDM5D!0.78!5.03!KDM5D;;chr6:34524093..34524135,-!p1@SPDEF!0.78!5.03!SPDEF;;chr3:141087339..141087387,+!p2@ZBTB38!0.77!54.64!ZBTB38;;chr12:27485785..27485816,+!p1@ARNTL2!0.77!37.03!ARNTL2;;chr11:128392273..128392308,-!p2@ETS1!0.77!22.74!ETS1;;chr12:26277956..26277980,-!p1@BHLHE41!0.77!18.87!BHLHE41;;chr15:96874145..96874166,+!p7@NR2F2!0.77!9.98!NR2F2;;chr6:10412600..10412637,-!p1@TFAP2A!0.77!8.63!TFAP2A;;chr17:36105042..36105060,-!p1@HNF1B!0.77!4.94!HNF1B;;chr12:27485823..27485868,+!p2@ARNTL2!0.76!21.21!ARNTL2;;chr8:67525473..67525518,-!p1@MYBL1!0.76!11.50!MYBL1;;chr15:67357924..67357952,+!p2@SMAD3!0.74!33.34!SMAD3;;chr2:122042770..122042785,-!p1@TFCP2L1!0.74!4.49!TFCP2L1;;chr2:238592039..238592054,+!p4@LRRFIP1!0.74!4.49!LRRFIP1;;chr12:80084279..80084293,-!p8@PAWR!0.73!7.64!PAWR;;chr12:66218573..66218596,+!p7@HMGA2!0.73!6.74!HMGA2;;chr4:149363475..149363492,-!p2@NR3C2!0.73!4.40!NR3C2;;chr17:36105074..36105086,-!p2@HNF1B!0.73!4.31!HNF1B;;chr7:27153454..27153469,-!p2@HOXA3!0.73!4.31!HOXA3;;chr15:96874012..96874042,+!p2@NR2F2!0.72!43.23!NR2F2;;chr6:34524025..34524045,-!p3@SPDEF!0.72!4.22!SPDEF;;chr3:141087393..141087426,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+|ffid_belonging_in_development=UBERON:0001041,UBERON:0002532,UBERON:0006595,UBERON:0009497,UBERON:0010316
 |fonse_cell_line=FF:0101120,FF:0103910
 |fonse_cell_line_closure=FF:0101120,FF:0103910

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FF:10432-106D9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:58, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0