FF:10510-107D6: Difference between revisions

Revision as of 19:13, 9 July 2012

Name:	osteosarcoma cell line:143B/TK^(-)neo^(R)
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	bone
dev stage	NA
sex	unknown
age	NA
cell type	osteoblast
cell line	143B/TK^(-)neo^(R)
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0861
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.351
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.07
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.115
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.071
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0775
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.162
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0563
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.3
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11279

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0698
MA0003.1	MA0003.1	0.255
MA0004.1	MA0004.1	0.952
MA0006.1	MA0006.1	0.82
MA0007.1	MA0007.1	0.63
MA0009.1	MA0009.1	0.966
MA0014.1	MA0014.1	0.744
MA0017.1	MA0017.1	0.0328
MA0018.2	MA0018.2	0.759
MA0019.1	MA0019.1	0.824
MA0024.1	MA0024.1	7.31406e-4
MA0025.1	MA0025.1	0.0864
MA0027.1	MA0027.1	0.85
MA0028.1	MA0028.1	0.776
MA0029.1	MA0029.1	0.412
MA0030.1	MA0030.1	0.014
MA0031.1	MA0031.1	0.0178
MA0035.2	MA0035.2	0.138
MA0038.1	MA0038.1	0.0474
MA0039.2	MA0039.2	0.243
MA0040.1	MA0040.1	0.662
MA0041.1	MA0041.1	0.167
MA0042.1	MA0042.1	0.142
MA0043.1	MA0043.1	0.326
MA0046.1	MA0046.1	0.0806
MA0047.2	MA0047.2	0.0169
MA0048.1	MA0048.1	0.746
MA0050.1	MA0050.1	0.0155
MA0051.1	MA0051.1	0.608
MA0052.1	MA0052.1	0.941
MA0055.1	MA0055.1	0.706
MA0057.1	MA0057.1	0.873
MA0058.1	MA0058.1	0.313
MA0059.1	MA0059.1	0.591
MA0060.1	MA0060.1	0.00158
MA0061.1	MA0061.1	0.143
MA0062.2	MA0062.2	0.2
MA0065.2	MA0065.2	0.00197
MA0066.1	MA0066.1	0.0192
MA0067.1	MA0067.1	0.841
MA0068.1	MA0068.1	0.0622
MA0069.1	MA0069.1	0.0916
MA0070.1	MA0070.1	0.096
MA0071.1	MA0071.1	0.22
MA0072.1	MA0072.1	0.898
MA0073.1	MA0073.1	0.78
MA0074.1	MA0074.1	0.469
MA0076.1	MA0076.1	0.645
MA0077.1	MA0077.1	0.549
MA0078.1	MA0078.1	0.364
MA0079.2	MA0079.2	0.697
MA0080.2	MA0080.2	0.0545
MA0081.1	MA0081.1	0.304
MA0083.1	MA0083.1	0.665
MA0084.1	MA0084.1	0.682
MA0087.1	MA0087.1	0.754
MA0088.1	MA0088.1	0.164
MA0090.1	MA0090.1	0.695
MA0091.1	MA0091.1	0.065
MA0092.1	MA0092.1	0.155
MA0093.1	MA0093.1	0.854
MA0099.2	MA0099.2	1.20827e-12
MA0100.1	MA0100.1	0.673
MA0101.1	MA0101.1	0.872
MA0102.2	MA0102.2	0.761
MA0103.1	MA0103.1	0.104
MA0104.2	MA0104.2	0.709
MA0105.1	MA0105.1	0.00115
MA0106.1	MA0106.1	0.488
MA0107.1	MA0107.1	0.887
MA0108.2	MA0108.2	8.88636e-4
MA0111.1	MA0111.1	0.374
MA0112.2	MA0112.2	1.95924e-4
MA0113.1	MA0113.1	0.119
MA0114.1	MA0114.1	0.0381
MA0115.1	MA0115.1	0.438
MA0116.1	MA0116.1	0.00281
MA0117.1	MA0117.1	0.809
MA0119.1	MA0119.1	0.194
MA0122.1	MA0122.1	0.222
MA0124.1	MA0124.1	0.827
MA0125.1	MA0125.1	0.937
MA0131.1	MA0131.1	0.72
MA0135.1	MA0135.1	0.148
MA0136.1	MA0136.1	0.259
MA0137.2	MA0137.2	0.122
MA0138.2	MA0138.2	0.235
MA0139.1	MA0139.1	0.102
MA0140.1	MA0140.1	0.507
MA0141.1	MA0141.1	0.255
MA0142.1	MA0142.1	0.498
MA0143.1	MA0143.1	0.445
MA0144.1	MA0144.1	0.132
MA0145.1	MA0145.1	0.192
MA0146.1	MA0146.1	0.0109
MA0147.1	MA0147.1	0.929
MA0148.1	MA0148.1	0.0149
MA0149.1	MA0149.1	0.331
MA0150.1	MA0150.1	0.874
MA0152.1	MA0152.1	0.357
MA0153.1	MA0153.1	0.689
MA0154.1	MA0154.1	0.0101
MA0155.1	MA0155.1	0.201
MA0156.1	MA0156.1	0.704
MA0157.1	MA0157.1	0.391
MA0159.1	MA0159.1	0.0423
MA0160.1	MA0160.1	0.333
MA0162.1	MA0162.1	0.27
MA0163.1	MA0163.1	2.87642e-4
MA0164.1	MA0164.1	0.71
MA0258.1	MA0258.1	0.00206
MA0259.1	MA0259.1	0.894

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11279

Novel motif	Logo	P-value
1	1	0.00934
10	10	0.099
100	100	0.527
101	101	0.93
102	102	0.964
103	103	0.0778
104	104	0.896
105	105	0.897
106	106	0.365
107	107	0.542
108	108	0.536
109	109	0.106
11	11	0.0122
110	110	0.0918
111	111	0.398
112	112	0.00901
113	113	0.574
114	114	0.0108
115	115	0.204
116	116	0.0792
117	117	0.0681
118	118	0.0481
119	119	0.0381
12	12	0.834
120	120	0.744
121	121	0.94
122	122	0.583
123	123	0.436
124	124	0.448
125	125	0.319
126	126	0.607
127	127	0.283
128	128	0.578
129	129	0.346
13	13	0.164
130	130	0.103
131	131	0.104
132	132	0.345
133	133	0.87
134	134	0.459
135	135	0.838
136	136	0.721
137	137	0.692
138	138	0.629
139	139	0.0119
14	14	0.381
140	140	0.253
141	141	0.278
142	142	0.653
143	143	0.96
144	144	0.391
145	145	0.888
146	146	0.886
147	147	0.957
148	148	0.0278
149	149	0.044
15	15	0.623
150	150	0.84
151	151	0.47
152	152	0.639
153	153	0.602
154	154	0.926
155	155	0.0303
156	156	0.861
157	157	0.229
158	158	0.814
159	159	0.784
16	16	0.0776
160	160	0.352
161	161	0.439
162	162	0.881
163	163	0.753
164	164	0.148
165	165	0.589
166	166	0.064
167	167	0.28
168	168	0.686
169	169	0.0158
17	17	0.244
18	18	0.787
19	19	0.188
2	2	0.626
20	20	0.728
21	21	0.556
22	22	0.091
23	23	0.981
24	24	0.598
25	25	0.56
26	26	0.25
27	27	0.164
28	28	0.967
29	29	0.0808
3	3	0.0449
30	30	0.829
31	31	0.389
32	32	3.3313e-5
33	33	0.16
34	34	0.937
35	35	0.623
36	36	0.0285
37	37	0.0618
38	38	0.201
39	39	0.633
4	4	0.288
40	40	0.0243
41	41	0.533
42	42	0.724
43	43	0.117
44	44	0.00151
45	45	0.993
46	46	0.146
47	47	0.0335
48	48	0.104
49	49	0.184
5	5	0.609
50	50	0.861
51	51	0.551
52	52	0.666
53	53	0.54
54	54	0.681
55	55	0.974
56	56	0.305
57	57	0.624
58	58	0.361
59	59	0.124
6	6	0.549
60	60	0.269
61	61	0.588
62	62	0.365
63	63	0.219
64	64	0.0898
65	65	0.207
66	66	0.0565
67	67	0.794
68	68	0.577
69	69	0.471
7	7	0.384
70	70	3.30304e-4
71	71	0.0246
72	72	0.111
73	73	0.171
74	74	0.608
75	75	0.13
76	76	0.378
77	77	0.0442
78	78	0.655
79	79	0.0264
8	8	0.126
80	80	0.899
81	81	0.314
82	82	0.00322
83	83	0.404
84	84	0.275
85	85	0.0141
86	86	0.641
87	87	0.85
88	88	0.926
89	89	0.00808
9	9	0.77
90	90	0.966
91	91	0.443
92	92	0.0778
93	93	0.971
94	94	0.34
95	95	0.053
96	96	0.0695
97	97	0.316
98	98	0.234
99	99	0.579

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11279

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
DOID:3347 osteosarcoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100407 osteosarcoma cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000055 (non-terminally differentiated cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000062 (osteoblast)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
201 (connective tissue cancer)
0060100 (musculoskeletal system cancer)
3347 (osteosarcoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001474 (bone element)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0002204 (musculoskeletal system)
0001434 (skeletal system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100385 (bone cancer cell line sample)
0100407 (osteosarcoma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000335 (mesenchyme condensation cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr12:66218255..66218304,+!p3@HMGA2!2.02!266.48!HMGA2;;chr1:25291475..25291511,-!p2@RUNX3!1.96!90.44!RUNX3;;chr9:77112244..77112262,+!p1@RORB!1.89!85.60!RORB;;chr8:80679993..80680011,-!p1@HEY1!1.81!89.75!HEY1;;chr6:34204921..34204939,+!p3@HMGA1!1.74!1537.43!HMGA1;;chr8:10588010..10588030,-!p1@SOX7!1.73!53.16!SOX7;;chr8:106330656..106330684,+!p1@ZFPM2!1.67!115.29!ZFPM2;;chr20:55204351..55204377,+!p1@TFAP2C!1.65!55.23!TFAP2C;;chr17:35294075..35294102,+!p1@ENST00000559335!1.65!44.18!LHX1;;chr12:66218212..66218244,+!p5@HMGA2!1.59!53.85!HMGA2;;chr6:1312325..1312340,+!p1@FOXQ1!1.55!55.92!FOXQ1;;chr12:77459306..77459365,-!p1@E2F7!1.52!385.91!E2F7;;chr12:27485762..27485776,+!p3@ARNTL2!1.51!82.15!ARNTL2;;chr12:66218378..66218401,+!p6@HMGA2!1.51!47.63!HMGA2;;chr20:55205825..55205847,+!p2@TFAP2C!1.50!30.38!TFAP2C;;chr6:34210478..34210481,+!p8@HMGA1!1.49!29.69!HMGA1;;chr16:86544113..86544145,+!p1@FOXF1!1.45!33.83!FOXF1;;chr9:77112225..77112238,+!p2@RORB!1.44!26.23!RORB;;chr12:66218183..66218209,+!p4@HMGA2!1.43!49.02!HMGA2;;chr2:172967621..172967637,-!p1@DLX2!1.42!66.27!DLX2;;chr12:66218443..66218461,+!p8@HMGA2!1.39!29.69!HMGA2;;chr11:65667884..65667895,-!p2@FOSL1!1.38!86.29!FOSL1;;chr3:169381420..169381535,-!p1@MECOM!1.38!26.92!MECOM;;chr11:65667846..65667868,-!p1@FOSL1!1.37!571.62!FOSL1;;chr11:65686732..65686756,+!p2@DRAP1!1.32!82.15!DRAP1;;chr12:66218598..66218645,+!p2@HMGA2!1.31!87.68!HMGA2;;chr5:2751762..2751784,-!p1@IRX2!1.31!19.33!IRX2;;chr17:41622925..41622976,-!p3@ETV4!1.30!28.30!ETV4;;chr8:106330696..106330719,+!p2@ZFPM2!1.29!23.47!ZFPM2;;chr1:25291620..25291635,-!p4@RUNX3!1.29!18.64!RUNX3;;chr20:42543441..42543497,+!p1@TOX2!1.27!78.01!TOX2;;chr17:70117153..70117174,+!p1@SOX9!1.26!171.21!SOX9;;chr7:27205106..27205134,-!p2@HOXA9!1.26!17.26!HOXA9;;chr12:27485785..27485816,+!p1@ARNTL2!1.24!111.15!ARNTL2;;chr8:80680024..80680046,-!p2@HEY1!1.24!18.64!HEY1;;chr7:27153454..27153469,-!p2@HOXA3!1.24!16.57!HOXA3;;chr9:132427972..132428056,+!p1@PRRX2!1.23!20.71!PRRX2;;chr12:66218003..66218018,+!p9@HMGA2!1.23!19.33!HMGA2;;chr8:22550982..22550999,-!p1@EGR3!1.22!43.49!EGR3;;chr16:86600426..86600441,+!p1@FOXC2!1.22!37.97!FOXC2;;chr12:66218836..66218888,+!p1@HMGA2!1.21!140.83!HMGA2;;chr17:41622765..41622821,-!p2@ETV4!1.19!22.09!ETV4;;chr6:391743..391759,+!p1@IRF4!1.19!14.50!IRF4;;chr8:55370487..55370503,+!p1@SOX17!1.19!14.50!SOX17;;chr17:41623009..41623053,-!p4@ETV4!1.18!22.78!ETV4;;chr1:170633348..170633399,+!p2@PRRX1!1.18!19.33!PRRX1;;chr15:83953397..83953425,-!p1@BNC1!1.17!15.88!BNC1;;chr7:28725740..28725778,+!p1@CREB5!1.15!115.98!CREB5;;chr7:35293685..35293718,-!p1@TBX20!1.15!13.12!TBX20;;chr8:106330543..106330554,+!p4@ZFPM2!1.15!13.12!ZFPM2;;chr20:55205791..55205817,+!p3@TFAP2C!1.15!13.12!TFAP2C;;chr4:4861385..4861398,+!p1@MSX1!1.14!37.97!MSX1;;chr11:65686802..65686818,+!p6@DRAP1!1.14!22.09!DRAP1;;chr1:170632959..170632987,+!p4@PRRX1!1.13!13.81!PRRX1;;chr7:14029283..14029311,-!p1@ETV1!1.12!64.89!ETV1;;chr1:8763440..8763460,-!p2@RERE!1.11!59.37!RERE;;chr11:65687362..65687436,+!p3@DRAP1!1.11!53.85!DRAP1;;chr12:27485823..27485868,+!p2@ARNTL2!1.11!48.33!ARNTL2;;chr17:41622834..41622883,-!p6@ETV4!1.11!14.50!ETV4;;chr6:29648890..29648944,-!p1@ZFP57!1.11!11.74!ZFP57;;chr13:100634130..100634143,+!p3@ZIC2!1.11!11.74!ZIC2;;chr6:34204672..34204692,+!p1@HMGA1!1.09!1268.88!HMGA1;;chr12:96588368..96588394,+!p3@ELK3!1.09!30.38!ELK3;;chr2:200322654..200322707,-!p2@SATB2!1.09!16.57!SATB2;;chr2:101436564..101436647,+!p1@NPAS2!1.08!222.30!NPAS2;;chr1:170632285..170632309,+!p1@PRRX1!1.08!12.43!PRRX1;;chr12:66218152..66218174,+!p10@HMGA2!1.08!11.74!HMGA2;;chr2:239756739..239756755,+!p2@TWIST2!1.07!18.64!TWIST2;;chr12:54447599..54447630,+!p3@HOXC4!1.07!13.12!HOXC4;;chr14:61116183..61116208,-!p1@SIX1!1.06!40.73!SIX1;;chr12:66218420..66218439,+!p12@HMGA2!1.06!10.36!HMGA2;;chr17:41622731..41622764,-!p5@ETV4!1.06!10.36!ETV4;;chr7:27205136..27205164,-!p1@HOXA9!1.06!10.36!HOXA9;;chr9:132427883..132427951,+!p2@PRRX2!1.06!10.36!PRRX2;;chr6:34204973..34204990,+!p4@HMGA1!1.05!136.00!HMGA1;;chr12:26277956..26277980,-!p1@BHLHE41!1.05!37.28!BHLHE41;;chr5:321810..321877,+!p1@AHRR!1.05!33.14!AHRR;;chr2:200323414..200323455,-!p1@SATB2!1.04!21.40!SATB2;;chr17:41623692..41623715,-!p1@ETV4!1.03!42.11!ETV4;;chr16:85932760..85932775,+!p1@IRF8!1.03!9.67!IRF8;;chr11:31832658..31832681,-!p1@PAX6!1.03!9.67!PAX6;;chr2:102091566..102091581,-!p1@RFX8!1.03!9.67!RFX8;;chrX:66763815..66763854,+!p2@AR!1.02!12.43!AR;;chr20:42543506..42543549,+!p2@TOX2!1.01!22.78!TOX2;;chr4:81118647..81118666,+!p1@PRDM8!1.01!12.43!PRDM8;;chr3:21792585..21792625,-!p2@ZNF385D!1.01!10.36!ZNF385D;;chr7:14028488..14028516,-!p2@ETV1!1.01!10.36!ETV1;;chr3:147111198..147111225,+!p4@ZIC1!1.00!8.97!ZIC1;;chr15:67418119..67418162,+!p5@SMAD3!0.98!9.67!SMAD3;;chr11:65686952..65686975,+!p5@DRAP1!0.97!47.63!DRAP1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.97!8.97!GLIS1;;chr21:38071430..38071456,+!p1@SIM2!0.97!8.28!SIM2;;chr4:109088940..109089037,-!p4@LEF1!0.97!8.28!LEF1;;chrX:103499602..103499617,-!p1@ESX1!0.97!8.28!ESX1;;chr13:79177674..79177701,-!p1@POU4F1!0.97!8.28!POU4F1;;chr5:178157651..178157689,-!p1@ZNF354A!0.96!34.52!ZNF354A;;chr2:185463247..185463263,+!p1@ZNF804A!0.96!14.50!ZNF804A;;chr10:114711019..114711041,+!p7@TCF7L2!0.96!12.43!TCF7L2;;chr4:4291837..4291859,-!p2@LYAR!0.94!26.23!LYAR;;chr18:6414884..6414942,-!p1@L3MBTL4!0.94!9.67!L3MBTL4;;chr3:185826855..185826911,-!p1@ETV5!0.93!214.01!ETV5;;chr12:80084167..80084197,-!p5@PAWR!0.93!17.95!PAWR;;chrX:66763856..66763896,+!p1@AR!0.93!11.05!AR;;chr3:21792631..21792665,-!p3@ZNF385D!0.93!7.59!ZNF385D;;chr1:170632439..170632465,+!p11@PRRX1!0.93!7.59!PRRX1;;chr7:27169801..27169844,-!p2@HOXA4!0.93!7.59!HOXA4;;chr12:54447637..54447659,+!p4@HOXC4!0.93!7.59!HOXC4;;chr16:51185172..51185197,-!p1@SALL1!0.93!7.59!SALL1;;chr17:46703212..46703238,-!p2@HOXB9!0.93!7.59!HOXB9;;chr6:45389791..45389832,+!p3@RUNX2!0.92!19.33!RUNX2;;chr20:50721803..50721857,-!p2@ZFP64!0.92!11.74!ZFP64;;chr1:25256756..25256774,-!p1@RUNX3!0.91!13.81!RUNX3;;chr5:174151553..174151610,+!p1@MSX2!0.90!11.74!MSX2;;chr17:46687959..46688007,-!p2@HOXB7!0.90!9.67!HOXB7;;chr2:172949484..172949522,+!p1@DLX1!0.90!6.90!DLX1;;chr4:109089290..109089320,-!p14@LEF1!0.90!6.90!LEF1;;chr5:2751785..2751808,-!p2@IRX2!0.90!6.90!IRX2;;chr11:129245526..129245553,+!p1@BARX2!0.90!6.90!BARX2;;chr11:129245736..129245758,+!p2@BARX2!0.90!6.90!BARX2;;chr12:54380404..54380433,+!p3@HOXC10!0.90!6.90!HOXC10;;chr12:54394416..54394467,+!p5@HOXC9!0.90!6.90!HOXC9;;chr1:8763463..8763499,-!p6@RERE!0.89!19.33!RERE;;chr12:96588279..96588299,+!p4@ELK3!0.88!32.45!ELK3;;chr10:94449703..94449718,+!p1@HHEX!0.88!26.92!HHEX;;chr1:8763296..8763339,-!p9@RERE!0.87!16.57!RERE;;chr1:149858461..149858479,+!p1@BOLA1!0.86!2578.49!BOLA1;;chrX:101186981..101187030,-!p1@ZMAT1!0.86!21.40!ZMAT1;;chr18:19749541..19749557,+!p1@GATA6!0.86!20.71!GATA6;;chr17:41622982..41623001,-!p11@ETV4!0.86!6.21!ETV4;;chr17:46703687..46703740,-!p1@HOXB9!0.86!6.21!HOXB9;;chr18:55102598..55102623,+!p1@ONECUT2!0.86!6.21!ONECUT2;;chr10:119303078..119303169,+!p2@EMX2!0.86!6.21!EMX2;;chr12:66218904..66218913,+!p11@HMGA2!0.86!6.21!HMGA2;;chr1:25291648..25291665,-!p7@RUNX3!0.86!6.21!RUNX3;;chr2:176994408..176994492,+!p1@HOXD8!0.86!6.21!HOXD8;;chr4:109089095..109089144,-!p6@LEF1!0.86!6.21!LEF1;;chr15:80696703..80696754,+!p1@ARNT2!0.85!8.28!ARNT2;;chr4:47916588..47916607,-!p1@NFXL1!0.84!52.47!NFXL1;;chr2:238600933..238600985,+!p3@LRRFIP1!0.84!33.83!LRRFIP1;;chr4:81105027..81105039,+!p3@PRDM8!0.84!6.90!PRDM8;;chr11:65687222..65687240,+!p7@DRAP1!0.83!7.59!DRAP1;;chr20:50179368..50179392,-!p2@NFATC2!0.83!7.59!NFATC2;;chr3:157823517..157823562,-!p1@SHOX2!0.83!6.21!SHOX2;;chr19:42636586..42636607,-!p1@POU2F2!0.82!16.57!POU2F2;;chr2:238600789..238600925,+!p1@LRRFIP1!0.81!118.74!LRRFIP1;;chr12:80083807..80083859,-!p11@PAWR!0.81!6.90!PAWR;;chr12:54393880..54393962,+!p1@HOXC9!0.81!5.52!HOXC9;;chr21:38071403..38071428,+!p2@SIM2!0.81!5.52!SIM2;;chr16:86600458..86600461,+!p3@FOXC2!0.81!5.52!FOXC2;;chr18:55102628..55102646,+!p2@ONECUT2!0.81!5.52!ONECUT2;;chr2:172967323..172967336,-!p4@DLX2!0.81!5.52!DLX2;;chr4:57774042..57774114,+!p1@REST!0.80!140.83!REST;;chr3:185826814..185826825,-!p3@ETV5!0.80!10.36!ETV5;;chr21:36260295..36260310,-!p3@RUNX1!0.80!8.97!RUNX1;;chr6:1389789..1389821,+!p1@FOXF2!0.80!7.59!FOXF2;;chr14:61191018..61191048,-!p1@SIX4!0.79!11.74!SIX4;;chr17:41623259..41623278,-!p7@ETV4!0.79!6.21!ETV4;;chrX:129402768..129402796,-!p2@ZNF280C!0.78!16.57!ZNF280C;;chr1:158979872..158979898,+!p3@IFI16!0.78!16.57!IFI16;;chr17:17740287..17740307,-!p1@SREBF1!0.77!140.83!SREBF1;;chr7:44143925..44143970,+!p1@AEBP1!0.77!120.81!AEBP1;;chr3:185826764..185826803,-!p2@ETV5!0.77!20.02!ETV5;;chr7:6655225..6655279,+!p1@ENST00000457543!0.77!7.59!ZNF853;;chr11:65687243..65687276,+!p8@DRAP1!0.77!6.90!DRAP1;;chr12:54394309..54394336,+!p2@HOXC9!0.77!4.83!HOXC9;;chr12:54402790..54402805,+!p2@HOXC8!0.77!4.83!HOXC8;;chr13:100634031..100634045,+!p1@ZIC2!0.77!4.83!ZIC2;;chr22:19748231..19748317,+!p1@TBX1!0.77!4.83!TBX1;;chr3:21792682..21792720,-!p1@ZNF385D!0.77!4.83!ZNF385D;;chr1:3569072..3569093,+!p1@TP73!0.77!4.83!TP73;;chr20:22565185..22565223,-!p3@FOXA2!0.77!4.83!FOXA2;;chr21:40032884..40032915,-!p2@ERG!0.77!4.83!ERG;;chr17:46687935..46687950,-!p3@HOXB7!0.77!4.83!HOXB7;;chr7:156803329..156803362,-!p1@MNX1!0.77!4.83!MNX1;;chrX:66763914..66763933,+!p3@AR!0.77!4.83!AR;;chr9:14314131..14314147,-!p2@NFIB!0.76!29.00!NFIB;;chr2:239756671..239756732,+!p1@TWIST2!0.76!16.57!TWIST2;;chr6:21597600..21597664,+!p3@SOX4!0.76!8.28!SOX4;;chr20:2673383..2673441,+!p1@EBF4!0.75!7.59!EBF4;;chr10:8095593..8095625,+!p3@GATA3!0.75!5.52!GATA3;;chr4:81104958..81104981,+!p5@PRDM8!0.75!5.52!PRDM8;;chr17:41623075..41623101,-!p9@ETV4!0.75!5.52!ETV4;;chr12:124873357..124873401,-!p1@NCOR2!0.74!58.68!NCOR2;;chr7:42276822..42276895,-!p2@GLI3!0.74!14.50!GLI3;;chr12:27485889..27485900,+!p4@ARNTL2!0.74!5.52!ARNTL2;;chr6:19837592..19837621,+!p1@ID4!0.73!29.69!ID4;;chr14:73360799..73360817,-!p1@DPF3!0.73!16.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ATF2!0.29!72.49!ATF2;;chr1:38325256..38325280,-!p1@MTF1!0.29!10.36!MTF1;;chr17:2304365..2304388,-!p2@MNT!0.29!7.59!MNT;;chr6:28411241..28411284,-!p1@ZSCAN23!0.29!4.83!ZSCAN23;;chr6:12012536..12012554,+!p4@HIVEP1!0.29!3.45!HIVEP1;;chr8:145159447..145159458,+!p4@MAF1!0.29!3.45!MAF1;;chr15:64752804..64752842,+!p2@ZNF609!0.29!3.45!ZNF609;;chr8:86089417..86089440,+!p2@E2F5!0.29!2.76!E2F5;;chr3:114343826..114343869,-!p4@ZBTB20!0.29!2.76!ZBTB20;;chr5:178287021..178287042,+!p2@ZNF354B!0.29!2.07!ZNF354B;;chr12:50479101..50479108,+!p3@SMARCD1!0.29!2.07!SMARCD1;;chr12:6798692..6798723,-!p5@ZNF384!0.29!2.07!ZNF384;;chr1:27022578..27022589,+!p5@ARID1A!0.29!2.07!ARID1A;;chr1:8483849..8483868,-!p14@RERE!0.29!2.07!RERE;;chr21:34144157..34144175,-!p3@GCFC1!0.29!2.07!GCFC1;;chr5:72744562..72744573,-!p3@FOXD1!0.29!1.38!FOXD1;;chr3:126076242..126076257,-!p1@KLF15!0.29!1.38!KLF15;;chr16:4323323..4323333,-!p4@TFAP4!0.29!1.38!TFAP4;;chr18:42260030..42260055,+!p3@SETBP1!0.29!1.38!SETBP1;;chr11:8102819..8102845,+!p3@TUB!0.29!1.38!TUB;;chr11:57103327..57103372,-!p1@SSRP1!0.28!82.15!SSRP1;;chr5:135468516..135468621,+!p1@SMAD5!0.28!66.27!SMAD5;;chr8:73921085..73921125,+!p1@TERF1!0.28!48.33!TERF1;;chr3:71114066..71114114,-!p1@FOXP1!0.28!35.21!FOXP1;;chr15:64752747..64752794,+!p1@ZNF609!0.28!14.50!ZNF609;;chr7:1570322..1570360,+!p1@MAFK!0.28!13.81!MAFK;;chr17:1958388..1958404,+!p1@HIC1!0.28!10.36!HIC1;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!0.28!10.36!SNAPC4;;chr14:62162285..62162296,+!p3@HIF1A!0.28!8.28!HIF1A;;chr9:125693757..125693818,-!p1@ZBTB26!0.28!6.90!ZBTB26;;chr6:106534192..106534224,+!p1@PRDM1!0.28!4.14!PRDM1;;chr18:3450293..3450304,+!p4@TGIF1!0.28!3.45!TGIF1;;chr4:26322267..26322334,+!p3@RBPJ!0.28!3.45!RBPJ;;chr1:42501569..42501614,-!p1@HIVEP3!0.28!2.76!HIVEP3;;chr19:12203100..12203132,+!p1@ZNF788!0.28!2.76!ZNF788;;chr14:89029308..89029318,+!p3@ZC3H14!0.28!2.07!ZC3H14;;chr18:5296138..5296159,-!p3@ZFP161!0.28!2.07!ZFP161;;chr2:231084639..231084654,-!p2@SP110!0.28!2.07!SP110;;chr14:64971014..64971044,+!p4@ZBTB1!0.28!2.07!ZBTB1;;chr1:205649614..205649663,-!p1@SLC45A3,p5@ELK4!0.28!2.07!ELK4;;chr6:10412600..10412637,-!p1@TFAP2A!0.28!2.07!TFAP2A;;chr6:45390269..45390298,+!p5@RUNX2!0.28!2.07!RUNX2;;chr9:109625229..109625282,+!p2@ZNF462!0.28!2.07!ZNF462;;chr6:126240442..126240459,+!p4@NCOA7!0.28!1.38!NCOA7;;chr2:61108808..61108821,+!p3@REL!0.28!1.38!REL;;chr17:2304082..2304103,-!p5@MNT!0.28!1.38!MNT;;chr1:41157641..41157665,+!p7@NFYC!0.28!1.38!NFYC;;chr1:67390715..67390733,+!p7@MIER1!0.28!1.38!MIER1;;chr10:105110720..105110744,-!p3@PCGF6!0.28!1.38!PCGF6;;chr11:62369806..62369837,-!p8@MTA2!0.28!1.38!MTA2;;chr14:58765305..58765324,+!p4@ARID4A!0.28!1.38!ARID4A;;chr22:42229100..42229146,+!p1@SREBF2!0.27!166.38!SREBF2;;chr16:89940012..89940059,+!p1@TCF25!0.27!146.36!TCF25;;chr1:8938766..8938774,-!p2@ENO1!0.27!115.98!ENO1;;chr13:46626847..46626899,-!p1@ZC3H13!0.27!52.47!ZC3H13;;chr6:15246261..15246312,+!p1@JARID2!0.27!40.73!JARID2;;chr1:150849047..150849082,-!p1@ARNT!0.27!25.54!ARNT;;chr20:39946279..39946356,-!p1@ZHX3!0.27!25.54!ZHX3;;chr10:38383255..38383324,+!p1@ZNF37A!0.27!15.19!ZNF37A;;chr12:108154891..108154923,-!p1@PRDM4!0.27!14.50!PRDM4;;chr4:38665769..38665801,+!p2@KLF3!0.27!14.50!KLF3;;chr12:498695..498748,-!p2@KDM5A!0.27!10.36!KDM5A;;chr14:100705335..100705360,+!p4@YY1!0.27!8.97!YY1;;
+|ffid_belonging_in_development=CL:0000134,CL:0000335
 |fonse_cell_line=FF:0100385
 |fonse_cell_line_closure=FF:0100385

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FF:10510-107D6: Difference between revisions

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Revision as of 19:13, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0