FF:11222-116B7: Difference between revisions

Revision as of 20:12, 9 July 2012

Name:	Fibroblast - Gingival, donor4 (GFH2)
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	gum
dev stage	22 years old adult
sex	male
age	22
cell type	fibroblast
cell line	NA
company	N/A
collaboration	Mitsuhiro Ohshima (Nihon University School of Dentistry)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.168
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0659
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.695
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.34
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.00972
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.404
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.528
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.174
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.166
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.26
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.34
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0925
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.134
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.34
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.91
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.23
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10848

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.735
MA0003.1	MA0003.1	0.164
MA0004.1	MA0004.1	0.456
MA0006.1	MA0006.1	0.0576
MA0007.1	MA0007.1	0.48
MA0009.1	MA0009.1	0.595
MA0014.1	MA0014.1	0.797
MA0017.1	MA0017.1	0.834
MA0018.2	MA0018.2	9.62262e-4
MA0019.1	MA0019.1	0.823
MA0024.1	MA0024.1	0.00979
MA0025.1	MA0025.1	0.412
MA0027.1	MA0027.1	0.465
MA0028.1	MA0028.1	4.40105e-4
MA0029.1	MA0029.1	0.3
MA0030.1	MA0030.1	0.631
MA0031.1	MA0031.1	0.287
MA0035.2	MA0035.2	0.0532
MA0038.1	MA0038.1	0.711
MA0039.2	MA0039.2	0.0157
MA0040.1	MA0040.1	0.413
MA0041.1	MA0041.1	0.272
MA0042.1	MA0042.1	0.191
MA0043.1	MA0043.1	9.87394e-4
MA0046.1	MA0046.1	0.469
MA0047.2	MA0047.2	0.763
MA0048.1	MA0048.1	0.704
MA0050.1	MA0050.1	3.29274e-17
MA0051.1	MA0051.1	9.44473e-13
MA0052.1	MA0052.1	0.206
MA0055.1	MA0055.1	0.48
MA0057.1	MA0057.1	0.423
MA0058.1	MA0058.1	0.283
MA0059.1	MA0059.1	0.162
MA0060.1	MA0060.1	1.18008e-4
MA0061.1	MA0061.1	0.365
MA0062.2	MA0062.2	4.02308e-8
MA0065.2	MA0065.2	0.598
MA0066.1	MA0066.1	0.272
MA0067.1	MA0067.1	0.00932
MA0068.1	MA0068.1	0.417
MA0069.1	MA0069.1	0.675
MA0070.1	MA0070.1	0.287
MA0071.1	MA0071.1	0.387
MA0072.1	MA0072.1	0.748
MA0073.1	MA0073.1	0.801
MA0074.1	MA0074.1	0.423
MA0076.1	MA0076.1	2.12678e-4
MA0077.1	MA0077.1	0.807
MA0078.1	MA0078.1	0.901
MA0079.2	MA0079.2	0.771
MA0080.2	MA0080.2	1.31473e-5
MA0081.1	MA0081.1	0.297
MA0083.1	MA0083.1	0.191
MA0084.1	MA0084.1	0.0251
MA0087.1	MA0087.1	0.0608
MA0088.1	MA0088.1	0.474
MA0090.1	MA0090.1	0.00604
MA0091.1	MA0091.1	0.0217
MA0092.1	MA0092.1	0.405
MA0093.1	MA0093.1	0.372
MA0099.2	MA0099.2	0.698
MA0100.1	MA0100.1	0.529
MA0101.1	MA0101.1	0.9
MA0102.2	MA0102.2	0.919
MA0103.1	MA0103.1	0.00749
MA0104.2	MA0104.2	0.00552
MA0105.1	MA0105.1	0.89
MA0106.1	MA0106.1	0.0214
MA0107.1	MA0107.1	0.439
MA0108.2	MA0108.2	0.0868
MA0111.1	MA0111.1	0.925
MA0112.2	MA0112.2	0.0153
MA0113.1	MA0113.1	0.548
MA0114.1	MA0114.1	0.917
MA0115.1	MA0115.1	0.0907
MA0116.1	MA0116.1	0.528
MA0117.1	MA0117.1	0.103
MA0119.1	MA0119.1	0.338
MA0122.1	MA0122.1	0.741
MA0124.1	MA0124.1	0.594
MA0125.1	MA0125.1	0.589
MA0131.1	MA0131.1	0.108
MA0135.1	MA0135.1	0.879
MA0136.1	MA0136.1	8.82082e-7
MA0137.2	MA0137.2	0.626
MA0138.2	MA0138.2	0.704
MA0139.1	MA0139.1	0.774
MA0140.1	MA0140.1	0.284
MA0141.1	MA0141.1	0.548
MA0142.1	MA0142.1	0.347
MA0143.1	MA0143.1	0.9
MA0144.1	MA0144.1	0.845
MA0145.1	MA0145.1	0.33
MA0146.1	MA0146.1	0.994
MA0147.1	MA0147.1	0.00226
MA0148.1	MA0148.1	0.642
MA0149.1	MA0149.1	0.789
MA0150.1	MA0150.1	0.207
MA0152.1	MA0152.1	0.0554
MA0153.1	MA0153.1	0.682
MA0154.1	MA0154.1	0.817
MA0155.1	MA0155.1	0.0308
MA0156.1	MA0156.1	2.14397e-6
MA0157.1	MA0157.1	0.219
MA0159.1	MA0159.1	0.0412
MA0160.1	MA0160.1	0.782
MA0162.1	MA0162.1	0.031
MA0163.1	MA0163.1	0.33
MA0164.1	MA0164.1	0.459
MA0258.1	MA0258.1	0.0949
MA0259.1	MA0259.1	0.0123

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10848

Novel motif	Logo	P-value
1	1	0.32
10	10	0.456
100	100	0.598
101	101	0.725
102	102	0.0385
103	103	0.58
104	104	0.221
105	105	0.638
106	106	0.16
107	107	0.046
108	108	0.535
109	109	0.992
11	11	0.963
110	110	0.649
111	111	0.0493
112	112	0.445
113	113	0.887
114	114	0.389
115	115	0.363
116	116	0.293
117	117	0.508
118	118	0.222
119	119	0.665
12	12	0.0102
120	120	0.35
121	121	0.264
122	122	0.0262
123	123	0.00442
124	124	0.286
125	125	0.641
126	126	0.54
127	127	0.439
128	128	0.0756
129	129	0.246
13	13	0.0248
130	130	0.281
131	131	0.569
132	132	0.197
133	133	0.171
134	134	0.0229
135	135	0.786
136	136	0.69
137	137	0.355
138	138	0.58
139	139	0.19
14	14	0.464
140	140	0.0429
141	141	0.0102
142	142	0.889
143	143	0.846
144	144	0.119
145	145	0.986
146	146	0.3
147	147	0.277
148	148	0.834
149	149	0.531
15	15	0.688
150	150	0.223
151	151	0.859
152	152	0.0314
153	153	0.661
154	154	0.518
155	155	0.00461
156	156	0.445
157	157	0.781
158	158	0.0551
159	159	0.469
16	16	0.151
160	160	0.595
161	161	0.979
162	162	0.126
163	163	0.754
164	164	0.541
165	165	0.664
166	166	0.00686
167	167	0.231
168	168	0.828
169	169	0.0788
17	17	0.921
18	18	0.123
19	19	0.00476
2	2	0.0715
20	20	0.14
21	21	0.484
22	22	0.39
23	23	0.155
24	24	0.814
25	25	0.138
26	26	0.666
27	27	0.537
28	28	0.505
29	29	0.172
3	3	0.566
30	30	0.0881
31	31	0.289
32	32	1.64388e-12
33	33	0.652
34	34	0.336
35	35	0.783
36	36	0.0402
37	37	0.623
38	38	0.537
39	39	0.568
4	4	0.0779
40	40	0.08
41	41	0.612
42	42	0.706
43	43	0.564
44	44	0.998
45	45	0.323
46	46	0.506
47	47	0.435
48	48	0.531
49	49	0.937
5	5	0.486
50	50	0.514
51	51	0.696
52	52	0.353
53	53	0.556
54	54	0.526
55	55	0.121
56	56	0.72
57	57	0.907
58	58	0.302
59	59	0.048
6	6	0.6
60	60	0.879
61	61	0.724
62	62	0.832
63	63	0.453
64	64	0.693
65	65	0.167
66	66	0.618
67	67	0.819
68	68	0.865
69	69	0.394
7	7	0.0973
70	70	0.434
71	71	0.605
72	72	0.639
73	73	0.168
74	74	0.242
75	75	0.417
76	76	0.982
77	77	0.21
78	78	0.526
79	79	0.00423
8	8	0.566
80	80	0.534
81	81	0.53
82	82	0.379
83	83	0.254
84	84	0.631
85	85	0.469
86	86	0.956
87	87	0.458
88	88	0.238
89	89	0.253
9	9	0.354
90	90	0.854
91	91	0.323
92	92	0.286
93	93	0.63
94	94	0.352
95	95	0.552
96	96	0.655
97	97	0.289
98	98	0.292
99	99	2.62935e-4

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10848

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000063 human fibroblast of gingiva sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002552 (fibroblast of gingiva)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0000344 (mucosa)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004923 (organ component layer)
0000161 (orifice)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003729 (mouth mucosa)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001828 (gingiva)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0000166 (oral opening)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000063 (human fibroblast of gingiva sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!2.30!224.53!PRRX1;;chr10:28034739..28034756,-!p1@MKX!2.13!134.24!MKX;;chr16:86544113..86544145,+!p1@FOXF1!2.10!154.44!FOXF1;;chr1:170633348..170633399,+!p2@PRRX1!1.87!97.42!PRRX1;;chr15:57511609..57511651,+!p2@TCF12!1.84!112.86!TCF12;;chr6:1389789..1389821,+!p1@FOXF2!1.84!91.48!FOXF2;;chr20:55204351..55204377,+!p1@TFAP2C!1.81!79.60!TFAP2C;;chr6:134210243..134210257,+!p1@TCF21!1.81!64.15!TCF21;;chr9:132427972..132428056,+!p1@PRRX2!1.76!73.66!PRRX2;;chr9:132427883..132427951,+!p2@PRRX2!1.75!54.65!PRRX2;;chr6:45296048..45296082,+!p1@RUNX2!1.68!53.46!RUNX2;;chr2:239756671..239756732,+!p1@TWIST2!1.65!135.43!TWIST2;;chr4:4861385..4861398,+!p1@MSX1!1.64!121.18!MSX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.63!204.34!CREB3L1;;chr17:59477233..59477263,+!p1@TBX2!1.52!97.42!TBX2;;chr14:37131058..37131139,+!p1@PAX9!1.50!30.89!PAX9;;chr12:115122318..115122331,-!p2@TBX3!1.47!28.51!TBX3;;chr1:170633262..170633285,+!p3@PRRX1!1.43!29.70!PRRX1;;chr3:141105705..141105770,+!p4@ZBTB38!1.42!30.89!ZBTB38;;chr9:96717629..96717644,-!p1@BARX1!1.41!24.95!BARX1;;chr14:61116183..61116208,-!p1@SIX1!1.40!89.10!SIX1;;chr2:239756739..239756755,+!p2@TWIST2!1.40!40.39!TWIST2;;chr7:44143925..44143970,+!p1@AEBP1!1.38!491.83!AEBP1;;chr7:19157248..19157268,-!p1@TWIST1!1.36!59.40!TWIST1;;chr1:170632477..170632506,+!p6@PRRX1!1.35!21.38!PRRX1;;chr8:72756667..72756736,-!p2@MSC!1.34!32.08!MSC;;chr7:44143978..44143989,+!p2@AEBP1!1.33!36.83!AEBP1;;chr1:170632250..170632277,+!p7@PRRX1!1.33!20.20!PRRX1;;chr14:24837368..24837401,+!p1@NFATC4!1.32!46.33!NFATC4;;chr1:75600067..75600094,+!p2@LHX8!1.30!19.01!LHX8;;chr6:1389824..1389840,+!p3@FOXF2!1.25!16.63!FOXF2;;chr11:46299539..46299620,+!p2@CREB3L1!1.22!26.14!CREB3L1;;chr11:65687222..65687240,+!p7@DRAP1!1.22!20.20!DRAP1;;chr11:34642612..34642646,+!p1@EHF!1.22!15.44!EHF;;chr2:19558373..19558392,-!p1@OSR1!1.20!40.39!OSR1;;chr2:200322654..200322707,-!p2@SATB2!1.20!21.38!SATB2;;chr8:72756063..72756125,-!p1@MSC!1.18!28.51!MSC;;chr2:191878812..191878823,-!p2@STAT1!1.18!17.82!STAT1;;chr10:28035133..28035148,-!p3@MKX!1.18!14.26!MKX;;chr5:72744594..72744609,-!p1@FOXD1!1.16!61.78!FOXD1;;chr10:31607702..31607755,+!p3@ZEB1!1.16!15.44!ZEB1;;chr14:37126765..37126799,+!p2@PAX9!1.15!13.07!PAX9;;chr6:1389989..1390019,+!p2@FOXF2!1.15!13.07!FOXF2;;chr17:59477197..59477212,+!p2@TBX2!1.13!21.38!TBX2;;chr1:170632439..170632465,+!p11@PRRX1!1.11!11.88!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!1.11!11.88!PRRX1;;chrY:2803415..2803468,+!p1@ZFY!1.11!11.88!ZFY;;chr18:22932080..22932170,-!p1@ZNF521!1.10!49.90!ZNF521;;chr2:200323414..200323455,-!p1@SATB2!1.10!24.95!SATB2;;chr3:141121847..141121868,+!p5@ZBTB38!1.10!17.82!ZBTB38;;chr17:59477275..59477286,+!p3@TBX2!1.10!15.44!TBX2;;chr8:72756637..72756664,-!p3@MSC!1.10!13.07!MSC;;chr15:42749722..42749739,-!p2@ZFP106!1.09!20.20!ZFP106;;chr11:65687362..65687436,+!p3@DRAP1!1.08!51.08!DRAP1;;chr1:170632959..170632987,+!p4@PRRX1!1.07!11.88!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!1.07!10.69!PRRX1;;chr10:28035112..28035130,-!p5@MKX!1.07!10.69!MKX;;chr2:46524537..46524553,+!p1@EPAS1!1.05!1021.68!EPAS1;;chr11:65687158..65687216,+!p4@DRAP1!1.03!55.84!DRAP1;;chr7:19157043..19157088,-!p2@TWIST1!1.03!24.95!TWIST1;;chr11:65686802..65686818,+!p6@DRAP1!1.02!16.63!DRAP1;;chr6:36355513..36355578,-!p2@ETV7!1.02!11.88!ETV7;;chr12:115121770..115121781,-!p4@TBX3!1.02!9.50!TBX3;;chr2:95963052..95963106,+!p1@KCNIP3!1.02!9.50!KCNIP3;;chr1:170632115..170632136,+!p9@PRRX1!1.02!9.50!PRRX1;;chr1:170632325..170632339,+!p24@PRRX1!1.02!9.50!PRRX1;;chr8:99956662..99956684,+!p1@OSR2!1.01!14.26!OSR2;;chr2:191878874..191878938,-!p1@STAT1!1.00!494.21!STAT1;;chr6:1312325..1312340,+!p1@FOXQ1!0.98!14.26!FOXQ1;;chr1:170632137..170632172,+!p10@PRRX1!0.97!8.32!PRRX1;;chr20:55205825..55205847,+!p2@TFAP2C!0.97!8.32!TFAP2C;;chr10:28035155..28035166,-!p8@MKX!0.97!8.32!MKX;;chr12:115121802..115121814,-!p5@TBX3!0.97!8.32!TBX3;;chr3:141121820..141121838,+!p9@ZBTB38!0.97!8.32!ZBTB38;;chr12:53614115..53614154,-!p1@RARG!0.96!45.14!RARG;;chr8:72756267..72756296,-!p4@MSC!0.95!11.88!MSC;;chr5:72744445..72744466,-!p2@FOXD1!0.94!13.07!FOXD1;;chr1:25256756..25256774,-!p1@RUNX3!0.92!14.26!RUNX3;;chr7:44143738..44143760,+!p4@AEBP1!0.92!8.32!AEBP1;;chr7:96654133..96654150,-!p1@DLX5!0.91!7.13!DLX5;;chr1:170632310..170632321,+!p15@PRRX1!0.91!7.13!PRRX1;;chr1:25291475..25291511,-!p2@RUNX3!0.91!7.13!RUNX3;;chr9:96717678..96717689,-!p2@BARX1!0.91!7.13!BARX1;;chr2:172949484..172949522,+!p1@DLX1!0.91!7.13!DLX1;;chr12:56753869..56753930,-!p1@STAT2!0.90!324.32!STAT2;;chr11:64764435..64764449,-!p1@BATF2!0.89!9.50!BATF2;;chr12:115121962..115121987,-!p1@TBX3!0.88!58.21!TBX3;;chr11:65667884..65667895,-!p2@FOSL1!0.87!26.14!FOSL1;;chr8:60031682..60031710,-!p2@TOX!0.87!10.69!TOX;;chr7:44143997..44144008,+!p3@AEBP1!0.87!8.32!AEBP1;;chr13:45151259..45151326,-!p2@TSC22D1!0.86!39.20!TSC22D1;;chr8:72756213..72756243,-!p5@MSC!0.86!8.32!MSC;;chr2:46612334..46612349,+!p6@EPAS1!0.86!8.32!EPAS1;;chr9:77112244..77112262,+!p1@RORB!0.86!7.13!RORB;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.94!KDM5D;;chr8:72756380..72756427,-!p8@MSC!0.84!5.94!MSC;;chr12:115122303..115122314,-!p6@TBX3!0.84!5.94!TBX3;;chr12:85673977..85674015,+!p1@ALX1!0.84!5.94!ALX1;;chr1:170633294..170633303,+!p23@PRRX1!0.84!5.94!PRRX1;;chr22:41763452..41763466,+!p2@TEF!0.84!5.94!TEF;;chr2:102091566..102091581,-!p1@RFX8!0.84!5.94!RFX8;;chr15:57511589..57511608,+!p4@TCF12!0.84!5.94!TCF12;;chr3:157823517..157823562,-!p1@SHOX2!0.81!5.94!SHOX2;;chr11:12696071..12696086,+!p3@TEAD1!0.80!7.13!TEAD1;;chr17:17726907..17726958,-!p2@SREBF1!0.79!34.45!SREBF1;;chr11:65686732..65686756,+!p2@DRAP1!0.79!23.76!DRAP1;;chr6:126240380..126240430,+!p2@NCOA7!0.79!14.26!NCOA7;;chr11:615570..615721,-!p2@IRF7!0.79!10.69!IRF7;;chr19:31840130..31840160,-!p2@TSHZ3!0.79!8.32!TSHZ3;;chr2:46602901..46602926,+!p7@EPAS1!0.79!7.13!EPAS1;;chr9:102584159..102584174,+!p2@NR4A3!0.78!9.50!NR4A3;;chr2:145277640..145277771,-!p1@ZEB2!0.77!72.47!ZEB2;;chr7:14029283..14029311,-!p1@ETV1!0.77!28.51!ETV1;;chr5:321810..321877,+!p1@AHRR!0.77!16.63!AHRR;;chr12:115122005..115122016,-!p3@TBX3!0.77!5.94!TBX3;;chr12:66218598..66218645,+!p2@HMGA2!0.76!23.76!HMGA2;;chr5:174151553..174151610,+!p1@MSX2!0.76!8.32!MSX2;;chr5:134369879..134369898,-!p2@PITX1!0.76!4.75!PITX1;;chr6:28321971..28321995,-!p1@ZNF323!0.76!4.75!ZNF323;;chr8:60031934..60031986,-!p6@TOX!0.76!4.75!TOX;;chr2:172950227..172950249,+!p2@DLX1!0.76!4.75!DLX1;;chr2:172967323..172967336,-!p4@DLX2!0.76!4.75!DLX2;;chr2:200322259..200322280,-!p5@SATB2!0.76!4.75!SATB2;;chr2:46612891..46612907,+!p10@EPAS1!0.76!4.75!EPAS1;;chr2:95963120..95963136,+!p2@KCNIP3!0.76!4.75!KCNIP3;;chr2:96012353..96012378,+!p4@KCNIP3!0.76!4.75!KCNIP3;;chr3:141121871..141121885,+!p13@ZBTB38!0.76!4.75!ZBTB38;;chr10:131762589..131762601,-!p3@EBF3!0.76!4.75!EBF3;;chr11:46299443..46299459,+!p4@CREB3L1!0.76!4.75!CREB3L1;;chr11:46333934..46333963,+!p5@CREB3L1!0.76!4.75!CREB3L1;;chr12:52448338..52448401,+!p7@NR4A1!0.76!4.75!NR4A1;;chr1:170632051..170632081,+!p16@PRRX1!0.76!4.75!PRRX1;;chr1:170632583..170632590,+!p26@PRRX1!0.76!4.75!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.76!4.75!PRRX1;;chr1:75602043..75602093,+!p1@LHX8!0.76!4.75!LHX8;;chr16:79633894..79633954,-!p3@MAF!0.75!9.50!MAF;;chr7:42276787..42276815,-!p1@GLI3!0.74!13.07!GLI3;;chr20:45142154..45142227,-!p1@ZNF334!0.74!9.50!ZNF334;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.73!4.75!GLIS1;;chr11:65687243..65687276,+!p8@DRAP1!0.72!5.94!DRAP1;;chr1:47903709..47903764,+!p1@BC169308!0.71!4.75!FOXD2;;chr13:45151403..45151433,-!p5@TSC22D1!0.70!9.50!TSC22D1;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.70!7.13!MEIS3P1;;chr20:48807615..48807644,+!p6@CEBPB!0.70!7.13!CEBPB;;chr2:46524865..46524870,+!p9@EPAS1!0.70!4.75!EPAS1;;chr2:145277882..145277967,-!p3@ZEB2!0.69!7.13!ZEB2;;chr11:615942..615957,-!p1@IRF7!0.68!41.58!IRF7;;chr3:71179699..71179744,-!p2@FOXP1!0.68!32.08!FOXP1;;chr2:157189180..157189290,-!p1@NR4A2!0.68!22.57!NR4A2;;chr1:158969752..158969780,+!p6@IFI16!0.68!7.13!IFI16;;chr14:24630902..24630948,+!p2@IRF9!0.68!4.75!IRF9;;chr5:92920256..92920282,+!p7@NR2F1!0.68!4.75!NR2F1;;chr5:134369905..134369972,-!p1@PITX1!0.67!5.94!PITX1;;chr7:14029312..14029325,-!p4@ETV1!0.67!4.75!ETV1;;chr10:104155659..104155676,+!p4@NFKB2!0.67!4.75!NFKB2;;chr14:21566731..21566836,-!p1@ZNF219!0.66!43.96!ZNF219;;chr22:38598086..38598105,+!p1@MAFF!0.66!43.96!MAFF;;chr11:65686952..65686975,+!p5@DRAP1!0.66!22.57!DRAP1;;chr5:92918894..92918912,+!p2@NR2F1!0.66!13.07!NR2F1;;chr18:56532100..56532130,+!p1@ZNF532!0.66!7.13!ZNF532;;chr15:67418177..67418204,+!p9@SMAD3!0.66!3.56!SMAD3;;chr10:31607811..31607837,+!p6@ZEB1!0.66!3.56!ZEB1;;chr12:115121587..115121597,-!p10@TBX3!0.66!3.56!TBX3;;chr12:115122262..115122271,-!p7@TBX3!0.66!3.56!TBX3;;chr12:53625846..53625861,-!p6@RARG!0.66!3.56!RARG;;chr1:158969727..158969749,+!p11@IFI16!0.66!3.56!IFI16;;chr1:170632028..170632043,+!p20@PRRX1!0.66!3.56!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.66!3.56!PRRX1;;chr1:170632907..170632916,+!p22@PRRX1!0.66!3.56!PRRX1;;chr1:170633194..170633205,+!p18@PRRX1!0.66!3.56!PRRX1;;chr20:55205791..55205817,+!p3@TFAP2C!0.66!3.56!TFAP2C;;chr5:174151612..174151633,+!p2@MSX2!0.66!3.56!MSX2;;chr7:150102756..150102772,+!p5@ZNF775!0.66!3.56!ZNF775;;chr8:116673894..116673913,-!p12@TRPS1!0.66!3.56!TRPS1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.66!3.56!RUNX1T1;;chr22:41721853..41721874,+!p6@ZC3H7B!0.66!3.56!ZC3H7B;;chr2:172967353..172967365,-!p5@DLX2!0.66!3.56!DLX2;;chr3:157824001..157824078,-!p2@SHOX2!0.66!3.56!SHOX2;;chr4:26324474..26324501,+!p16@RBPJ!0.66!3.56!RBPJ;;chrX:66763815..66763854,+!p2@AR!0.65!4.75!AR;;chr9:102584262..102584276,+!p1@NR4A3!0.64!8.32!NR4A3;;chr19:17356189..17356221,-!p2@NR2F6!0.64!5.94!NR2F6;;chr2:192015750..192015793,-!p2@STAT4!0.64!4.75!STAT4;;chr14:75894714..75894733,+!p1@JDP2!0.63!109.30!JDP2;;chr3:178789522..178789564,-!p2@ZMAT3!0.63!28.51!ZMAT3;;chr2:113993052..113993097,-!p2@PAX8!0.63!8.32!PAX8;;chr12:57914286..57914304,-!p1@DDIT3!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-!p9@C14orf43!0.26!1.19!C14orf43;;chr2:231280908..231280945,+!p1@SP100!0.25!61.78!SP100;;chr2:42795745..42795824,+!p1@MTA3!0.25!14.26!MTA3;;chr7:149194756..149194839,-!p1@ZNF746!0.25!11.88!ZNF746;;chr17:33288552..33288598,+!p1@ZNF830!0.25!11.88!ZNF830;;chr19:35759424..35759454,+!p2@USF2!0.25!8.32!USF2;;chr2:27603582..27603616,-!p1@ZNF513!0.25!8.32!ZNF513;;chr16:30621663..30621718,-!p1@ZNF689!0.25!7.13!ZNF689;;chr1:151431647..151431669,-!p2@POGZ!0.25!7.13!POGZ;;chr16:31085514..31085576,-!p1@ZNF668!0.25!5.94!ZNF668;;chr20:306051..306096,+!p3@SOX12!0.25!3.56!SOX12;;chr12:53614155..53614187,-!p3@RARG!0.25!2.38!RARG;;chr12:53774035..53774058,+!p4@SP1!0.25!2.38!SP1;;chr16:30596963..30596999,-!p3@ZNF785!0.25!2.38!ZNF785;;chr19:12405689..12405707,-!p3@ZNF44!0.25!2.38!ZNF44;;chr19:36909484..36909525,-!p2@ZFP82!0.25!2.38!ZFP82;;chr6:170863353..170863368,+!p2@TBP!0.25!2.38!TBP;;chr7:104654690..104654704,+!p2@MLL5!0.25!2.38!MLL5;;chr8:116681108..116681120,-!p9@TRPS1!0.25!1.19!TRPS1;;chr8:124286761..124286773,-!p4@ZHX1!0.25!1.19!ZHX1;;chr8:145535378..145535420,+!p4@HSF1!0.25!1.19!HSF1;;chr19:38720294..38720348,-!p1@DPF1!0.25!1.19!DPF1;;chr1:211432784..211432796,+!p8@RCOR3!0.25!1.19!RCOR3;;chr1:42671469..42671496,-!p6@FOXJ3!0.25!1.19!FOXJ3;;chr20:48807548..48807572,+!p14@CEBPB!0.25!1.19!CEBPB;;chr22:30163056..30163067,-!p3@ZMAT5!0.25!1.19!ZMAT5;;chr17:40719165..40719168,+!p4@MLX!0.25!1.19!MLX;;chr18:3449618..3449634,+!p13@TGIF1!0.25!1.19!TGIF1;;chr18:45457558..45457570,-!p9@SMAD2!0.25!1.19!SMAD2;;chr18:56530573..56530591,+!p9@ZNF532!0.25!1.19!ZNF532;;chr19:3573282..3573289,+!p5@HMG20B!0.25!1.19!HMG20B;;chr19:37960314..37960329,+!p3@ZNF570!0.25!1.19!ZNF570;;chr11:8102819..8102845,+!p3@TUB!0.25!1.19!TUB;;chr12:57505581..57505598,-!p4@STAT6!0.25!1.19!STAT6;;chr12:80083544..80083558,-!p13@PAWR!0.25!1.19!PAWR;;chr14:74206359..74206374,-!p8@C14orf43!0.25!1.19!C14orf43;;chr5:132299290..132299310,-!p2@AFF4!0.24!29.70!AFF4;;chr5:132299313..132299334,-!p1@AFF4!0.24!29.70!AFF4;;chr1:114302086..114302174,-!p1@PHTF1!0.24!28.51!PHTF1;;chr19:8579030..8579061,-!p1@ZNF414!0.24!24.95!ZNF414;;chr12:66218836..66218888,+!p1@HMGA2!0.24!14.26!HMGA2;;chr8:144349606..144349656,+!p1@GLI4!0.24!10.69!GLI4;;chr12:133614062..133614117,+!p1@ZNF84!0.24!9.50!ZNF84;;chr19:14800849..14800917,+!p1@ZNF333!0.24!9.50!ZNF333;;chr17:16472486..16472533,-!p1@ZNF287!0.24!7.13!ZNF287;;chr9:116638565..116638606,+!p1@ZNF618!0.24!5.94!ZNF618;;chr3:37217736..37217753,-!p2@LRRFIP2!0.24!5.94!LRRFIP2;;chr16:2059754..2059777,-!p2@ZNF598!0.24!4.75!ZNF598;;chr19:37862054..37862110,+!p1@ZNF527!0.24!3.56!ZNF527;;chr22:41697497..41697515,+!p2@ZC3H7B!0.24!3.56!ZC3H7B;;chrX:106960221..106960236,-!p3@TSC22D3!0.24!3.56!TSC22D3;;chrX:77041657..77041668,-!p2@ATRX!0.24!2.38!ATRX;;chr16:29818132..29818144,+!p12@MAZ!0.24!2.38!MAZ;;chr17:38219184..38219195,+!p3@THRA!0.24!2.38!THRA;;chr19:19617430..19617443,+!p9@GATAD2A!0.24!2.38!GATAD2A;;chr19:52956798..52956843,+!p1@ZNF578!0.24!2.38!ZNF578;;chr7:74072256..74072279,+!p3@GTF2I!0.24!2.38!GTF2I;;chr6:126240442..126240459,+!p4@NCOA7!0.24!1.19!NCOA7;;chr6:45390077..45390105,+!p9@RUNX2!0.24!1.19!RUNX2;;chr8:106330696..106330719,+!p2@ZFPM2!0.24!1.19!ZFPM2;;chr8:116681247..116681261,-!p8@TRPS1!0.24!1.19!TRPS1;;chr8:60031809..60031835,-!p4@TOX!0.24!1.19!TOX;;
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11222-116B7: Difference between revisions

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Revision as of 20:12, 9 July 2012

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0