FF:11935-125I9: Difference between revisions

Revision as of 15:51, 15 May 2017

Name:	Olfactory epithelial cells, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs13818
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	ANATOMICAL SYSTEM
dev stage	NA
sex	male
age	61
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Christine Wells (University of Queensland)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005190

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13818		CAGE		DRX008386		DRR009258

Accession ID Hg19

Library id		BAM		CTSS
CNhs13818		DRZ000683		DRZ002068

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0103
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.198
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	1
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.212
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.128
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0941
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.252
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0875
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.113
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.119
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.457
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.651
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0636
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.74
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.323
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.533
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.312
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.252
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.119
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.941
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.484
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.119
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.354
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	1.051
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.00634
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.933
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13818

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0155
MA0003.1	MA0003.1	0.535
MA0004.1	MA0004.1	0.134
MA0006.1	MA0006.1	0.338
MA0007.1	MA0007.1	0.902
MA0009.1	MA0009.1	0.635
MA0014.1	MA0014.1	0.427
MA0017.1	MA0017.1	0.097
MA0018.2	MA0018.2	1.13062e-6
MA0019.1	MA0019.1	0.0797
MA0024.1	MA0024.1	1.4876e-5
MA0025.1	MA0025.1	5.88859e-4
MA0027.1	MA0027.1	0.831
MA0028.1	MA0028.1	0.0682
MA0029.1	MA0029.1	0.585
MA0030.1	MA0030.1	0.0084
MA0031.1	MA0031.1	0.0504
MA0035.2	MA0035.2	0.00291
MA0038.1	MA0038.1	0.0256
MA0039.2	MA0039.2	0.0127
MA0040.1	MA0040.1	0.394
MA0041.1	MA0041.1	0.235
MA0042.1	MA0042.1	0.766
MA0043.1	MA0043.1	3.36334e-5
MA0046.1	MA0046.1	0.0567
MA0047.2	MA0047.2	0.134
MA0048.1	MA0048.1	0.00167
MA0050.1	MA0050.1	0.933
MA0051.1	MA0051.1	0.596
MA0052.1	MA0052.1	0.0189
MA0055.1	MA0055.1	0.451
MA0057.1	MA0057.1	0.103
MA0058.1	MA0058.1	0.00543
MA0059.1	MA0059.1	0.729
MA0060.1	MA0060.1	1.21497e-15
MA0061.1	MA0061.1	0.088
MA0062.2	MA0062.2	1.36147e-7
MA0065.2	MA0065.2	0.802
MA0066.1	MA0066.1	0.491
MA0067.1	MA0067.1	0.00508
MA0068.1	MA0068.1	0.989
MA0069.1	MA0069.1	0.201
MA0070.1	MA0070.1	0.551
MA0071.1	MA0071.1	0.898
MA0072.1	MA0072.1	0.161
MA0073.1	MA0073.1	0.216
MA0074.1	MA0074.1	0.354
MA0076.1	MA0076.1	0.00232
MA0077.1	MA0077.1	0.852
MA0078.1	MA0078.1	0.986
MA0079.2	MA0079.2	0.184
MA0080.2	MA0080.2	8.947e-9
MA0081.1	MA0081.1	0.00163
MA0083.1	MA0083.1	0.0441
MA0084.1	MA0084.1	0.1
MA0087.1	MA0087.1	0.842
MA0088.1	MA0088.1	0.658
MA0090.1	MA0090.1	1.19193e-5
MA0091.1	MA0091.1	0.0926
MA0092.1	MA0092.1	0.0855
MA0093.1	MA0093.1	0.0522
MA0099.2	MA0099.2	7.04566e-6
MA0100.1	MA0100.1	0.286
MA0101.1	MA0101.1	0.00275
MA0102.2	MA0102.2	0.596
MA0103.1	MA0103.1	0.103
MA0104.2	MA0104.2	0.0206
MA0105.1	MA0105.1	0.529
MA0106.1	MA0106.1	0.0417
MA0107.1	MA0107.1	0.00621
MA0108.2	MA0108.2	0.0279
MA0111.1	MA0111.1	0.86
MA0112.2	MA0112.2	0.00959
MA0113.1	MA0113.1	0.398
MA0114.1	MA0114.1	0.259
MA0115.1	MA0115.1	0.0981
MA0116.1	MA0116.1	0.329
MA0117.1	MA0117.1	0.0328
MA0119.1	MA0119.1	0.00349
MA0122.1	MA0122.1	0.149
MA0124.1	MA0124.1	0.612
MA0125.1	MA0125.1	0.493
MA0131.1	MA0131.1	0.61
MA0135.1	MA0135.1	0.109
MA0136.1	MA0136.1	7.34585e-12
MA0137.2	MA0137.2	0.0688
MA0138.2	MA0138.2	0.677
MA0139.1	MA0139.1	0.733
MA0140.1	MA0140.1	0.00243
MA0141.1	MA0141.1	0.885
MA0142.1	MA0142.1	0.286
MA0143.1	MA0143.1	0.731
MA0144.1	MA0144.1	0.872
MA0145.1	MA0145.1	0.747
MA0146.1	MA0146.1	0.454
MA0147.1	MA0147.1	0.123
MA0148.1	MA0148.1	0.186
MA0149.1	MA0149.1	0.367
MA0150.1	MA0150.1	0.00764
MA0152.1	MA0152.1	0.0296
MA0153.1	MA0153.1	0.146
MA0154.1	MA0154.1	0.964
MA0155.1	MA0155.1	0.523
MA0156.1	MA0156.1	2.83992e-10
MA0157.1	MA0157.1	0.0938
MA0159.1	MA0159.1	0.643
MA0160.1	MA0160.1	0.0289
MA0162.1	MA0162.1	0.0113
MA0163.1	MA0163.1	0.00974
MA0164.1	MA0164.1	0.849
MA0258.1	MA0258.1	0.243
MA0259.1	MA0259.1	0.408

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13818

Novel motif	Logo	P-value
1	1	0.891
10	10	0.157
100	100	0.54
101	101	0.78
102	102	0.0841
103	103	0.779
104	104	0.867
105	105	0.175
106	106	0.152
107	107	0.014
108	108	0.263
109	109	0.399
11	11	0.458
110	110	0.433
111	111	0.902
112	112	0.471
113	113	0.787
114	114	0.136
115	115	0.322
116	116	0.0275
117	117	0.362
118	118	0.922
119	119	0.242
12	12	0.211
120	120	0.434
121	121	0.487
122	122	0.0795
123	123	0.739
124	124	0.31
125	125	0.519
126	126	0.392
127	127	0.959
128	128	0.394
129	129	0.343
13	13	0.856
130	130	0.188
131	131	0.552
132	132	0.0637
133	133	0.96
134	134	0.655
135	135	0.846
136	136	0.945
137	137	0.121
138	138	0.857
139	139	0.976
14	14	0.446
140	140	0.509
141	141	0.182
142	142	0.318
143	143	0.418
144	144	0.608
145	145	0.366
146	146	0.178
147	147	0.116
148	148	0.658
149	149	0.108
15	15	0.376
150	150	0.342
151	151	0.88
152	152	0.0583
153	153	0.511
154	154	0.713
155	155	0.103
156	156	0.329
157	157	0.476
158	158	0.0452
159	159	0.991
16	16	0.022
160	160	0.202
161	161	0.803
162	162	0.458
163	163	0.979
164	164	0.0045
165	165	0.731
166	166	0.0412
167	167	0.722
168	168	0.701
169	169	0.0103
17	17	0.593
18	18	0.559
19	19	0.00429
2	2	0.521
20	20	0.643
21	21	0.0512
22	22	0.615
23	23	0.596
24	24	0.243
25	25	0.461
26	26	0.125
27	27	0.889
28	28	0.612
29	29	0.743
3	3	0.266
30	30	0.764
31	31	0.578
32	32	9.21153e-23
33	33	0.926
34	34	0.995
35	35	0.984
36	36	0.539
37	37	0.0449
38	38	0.376
39	39	0.373
4	4	0.297
40	40	0.917
41	41	0.351
42	42	0.826
43	43	0.644
44	44	0.497
45	45	0.71
46	46	0.571
47	47	0.936
48	48	0.752
49	49	0.91
5	5	0.891
50	50	0.611
51	51	0.734
52	52	0.84
53	53	0.767
54	54	0.29
55	55	0.0434
56	56	0.894
57	57	0.315
58	58	0.558
59	59	0.252
6	6	0.522
60	60	0.812
61	61	0.681
62	62	0.559
63	63	0.194
64	64	0.893
65	65	0.691
66	66	0.0515
67	67	0.791
68	68	0.483
69	69	0.568
7	7	0.391
70	70	0.0427
71	71	0.212
72	72	0.346
73	73	0.0257
74	74	0.408
75	75	0.663
76	76	0.146
77	77	0.0868
78	78	0.76
79	79	1.42552e-4
8	8	0.116
80	80	0.0572
81	81	0.883
82	82	0.00562
83	83	0.472
84	84	0.639
85	85	0.194
86	86	0.807
87	87	0.851
88	88	0.121
89	89	0.293
9	9	0.687
90	90	0.936
91	91	0.965
92	92	0.0719
93	93	0.518
94	94	0.204
95	95	0.682
96	96	0.654
97	97	0.737
98	98	0.216
99	99	0.00131

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13818

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
FF:0000002 in vivo cell sample
FF:0000210 human sample
FF:0200002 olfactory epithelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000197 (receptor cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000098 (sensory epithelial cell)
0002167 (olfactory epithelial cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0200002 (olfactory epithelial cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr14:37131058..37131139,+!p1@PAX9!1.99!96.36!PAX9;;chr7:19157248..19157268,-!p1@TWIST1!1.90!208.80!TWIST1;;chr1:170632285..170632309,+!p1@PRRX1!1.71!56.14!PRRX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.68!75.70!TFAP2A;;chr14:61116183..61116208,-!p1@SIX1!1.57!132.94!SIX1;;chr2:223163706..223163730,-!p1@PAX3!1.56!35.01!PAX3;;chr8:99956662..99956684,+!p1@OSR2!1.49!44.95!OSR2;;chr9:132427972..132428056,+!p1@PRRX2!1.49!38.95!PRRX2;;chr9:132427883..132427951,+!p2@PRRX2!1.48!29.33!PRRX2;;chr20:55204351..55204377,+!p1@TFAP2C!1.44!33.59!TFAP2C;;chr6:10415276..10415341,-!p2@TFAP2A!1.39!28.54!TFAP2A;;chr6:50789717..50789729,+!p4@TFAP2B!1.39!23.34!TFAP2B;;chr1:170633348..170633399,+!p2@PRRX1!1.37!30.28!PRRX1;;chr10:28034739..28034756,-!p1@MKX!1.35!21.61!MKX;;chr6:50786591..50786614,+!p1@TFAP2B!1.34!20.82!TFAP2B;;chr15:57511609..57511651,+!p2@TCF12!1.32!32.96!TCF12;;chr11:46299199..46299233,+!p1@CREB3L1!1.26!87.05!CREB3L1;;chr7:44143925..44143970,+!p1@AEBP1!1.22!339.06!AEBP1;;chr15:96869255..96869291,+!p6@NR2F2!1.17!25.23!NR2F2;;chr7:44143978..44143989,+!p2@AEBP1!1.17!25.07!AEBP1;;chr6:10412392..10412409,-!p4@TFAP2A!1.17!15.77!TFAP2A;;chr12:85673977..85674015,+!p1@ALX1!1.17!13.88!ALX1;;chr2:239756671..239756732,+!p1@TWIST2!1.15!41.79!TWIST2;;chr3:128206762..128206781,-!p2@GATA2!1.13!77.27!GATA2;;chr1:170633262..170633285,+!p3@PRRX1!1.13!14.35!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!1.13!12.62!PRRX1;;chr6:126240380..126240430,+!p2@NCOA7!1.12!31.54!NCOA7;;chr3:141121847..141121868,+!p5@ZBTB38!1.12!18.61!ZBTB38;;chr2:46612334..46612349,+!p6@EPAS1!1.11!15.77!EPAS1;;chr3:128212033..128212051,-!p1@GATA2!1.10!11.67!GATA2;;chr12:85674018..85674039,+!p3@ALX1!1.10!11.51!ALX1;;chr15:42749722..42749739,-!p2@ZFP106!1.08!19.71!ZFP106;;chr2:46524537..46524553,+!p1@EPAS1!1.07!1052.35!EPAS1;;chr15:96873984..96873999,+!p3@NR2F2!1.07!79.32!NR2F2;;chr6:10412576..10412599,-!p5@TFAP2A!1.07!10.88!TFAP2A;;chr14:37126765..37126799,+!p2@PAX9!1.07!10.88!PAX9;;chr1:170632723..170632739,+!p8@PRRX1!1.06!10.57!PRRX1;;chr7:44143997..44144008,+!p3@AEBP1!1.05!12.93!AEBP1;;chr3:157823517..157823562,-!p1@SHOX2!1.05!10.88!SHOX2;;chrY:21906594..21906622,-!p1@KDM5D!1.05!10.09!KDM5D;;chr11:46299539..46299620,+!p2@CREB3L1!1.03!16.56!CREB3L1;;chr6:1389789..1389821,+!p1@FOXF2!1.03!13.56!FOXF2;;chr11:44331576..44331650,-!p1@ALX4!1.03!9.62!ALX4;;chr12:85673868..85673881,+!p2@ALX1!1.01!9.15!ALX1;;chr5:321810..321877,+!p1@AHRR!1.00!29.33!AHRR;;chr6:126240442..126240459,+!p4@NCOA7!0.98!11.04!NCOA7;;chr16:86544113..86544145,+!p1@FOXF1!0.98!10.72!FOXF1;;chr7:19157043..19157088,-!p2@TWIST1!0.97!21.45!TWIST1;;chr11:12696071..12696086,+!p3@TEAD1!0.96!10.72!TEAD1;;chr1:170632250..170632277,+!p7@PRRX1!0.96!8.04!PRRX1;;chr2:239756739..239756755,+!p2@TWIST2!0.95!13.88!TWIST2;;chr12:115121962..115121987,-!p1@TBX3!0.93!64.97!TBX3;;chr12:104531823..104531849,-!p5@NFYB!0.93!16.09!NFYB;;chr8:93074803..93074845,-!p1@RUNX1T1!0.92!7.41!RUNX1T1;;chr1:110613238..110613272,-!p1@ALX3!0.92!7.41!ALX3;;chr10:63809013..63809041,+!p3@ARID5B!0.90!40.53!ARID5B;;chr8:72756667..72756736,-!p2@MSC!0.90!11.20!MSC;;chr14:95236440..95236465,-!p1@GSC!0.89!6.78!GSC;;chr1:170633058..170633084,+!p5@PRRX1!0.88!6.62!PRRX1;;chr10:63853436..63853442,+!p4@ARID5B!0.87!36.27!ARID5B;;chr2:8822176..8822196,+!p1@ID2!0.86!934.23!ID2;;chr15:96874012..96874042,+!p2@NR2F2!0.85!57.88!NR2F2;;chr10:114710218..114710229,+!p4@TCF7L2!0.83!11.83!TCF7L2;;chr14:61116168..61116180,-!p2@SIX1!0.83!6.62!SIX1;;chr1:170632959..170632987,+!p4@PRRX1!0.83!6.31!PRRX1;;chr8:77593474..77593612,+!p1@ZFHX4!0.82!25.55!ZFHX4;;chr16:31076332..31076388,-!p3@ZNF668!0.82!5.68!ZNF668;;chr14:24837368..24837401,+!p1@NFATC4!0.81!13.56!NFATC4;;chr12:80085061..80085119,-!p6@PAWR!0.81!9.15!PAWR;;chrY:2803415..2803468,+!p1@ZFY!0.81!5.52!ZFY;;chr12:115122318..115122331,-!p2@TBX3!0.79!5.20!TBX3;;chr6:50786547..50786564,+!p3@TFAP2B!0.79!5.20!TFAP2B;;chr14:75894714..75894733,+!p1@JDP2!0.78!155.34!JDP2;;chr1:110613276..110613299,-!p2@ALX3!0.78!5.05!ALX3;;chr3:141121820..141121838,+!p9@ZBTB38!0.78!5.05!ZBTB38;;chr5:139492456..139492489,+!p7@PURA!0.78!5.05!PURA;;chr6:50786571..50786590,+!p2@TFAP2B!0.77!4.89!TFAP2B;;chrY:21906761..21906810,-!p2@KDM5D!0.77!4.89!KDM5D;;chr10:114710098..114710130,+!p2@TCF7L2!0.76!38.95!TCF7L2;;chr15:96874927..96874938,+!p8@NR2F2!0.76!10.88!NR2F2;;chr1:170632477..170632506,+!p6@PRRX1!0.76!4.73!PRRX1;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.75!51.41!GLIS2;;chr19:13134772..13134822,+!p2@NFIX!0.75!7.10!NFIX;;chr15:96869222..96869251,+!p18@NR2F2!0.75!5.52!NR2F2;;chr15:96875041..96875052,+!p17@NR2F2!0.74!6.78!NR2F2;;chr15:96876966..96877017,+!p12@NR2F2!0.74!6.78!NR2F2;;chr10:63809106..63809127,+!p1@ARID5B!0.73!66.87!ARID5B;;chr16:86600426..86600441,+!p1@FOXC2!0.72!11.35!FOXC2;;chr11:12696002..12696022,+!p2@TEAD1!0.72!11.20!TEAD1;;chr8:72756063..72756125,-!p1@MSC!0.72!9.30!MSC;;chr1:170632115..170632136,+!p9@PRRX1!0.72!4.26!PRRX1;;chr2:208030647..208030689,-!p1@KLF7!0.71!38.64!KLF7;;chr8:49833948..49833973,-!p2@SNAI2!0.71!29.17!SNAI2;;chr15:96874145..96874166,+!p7@NR2F2!0.71!8.52!NR2F2;;chr15:96869292..96869320,+!p15@NR2F2!0.71!6.31!NR2F2;;chr6:85473156..85473210,-!p2@TBX18!0.71!5.20!TBX18;;chr10:28032421..28032494,-!p2@MKX!0.71!4.10!MKX;;chr11:46333934..46333963,+!p5@CREB3L1!0.71!4.10!CREB3L1;;chr12:115122303..115122314,-!p6@TBX3!0.71!4.10!TBX3;;chr12:53625846..53625861,-!p6@RARG!0.71!4.10!RARG;;chr14:37126814..37126834,+!p4@PAX9!0.71!4.10!PAX9;;chr3:157824001..157824078,-!p2@SHOX2!0.71!4.10!SHOX2;;chr20:55205825..55205847,+!p2@TFAP2C!0.71!4.10!TFAP2C;;chr12:80084737..80084763,-!p3@PAWR!0.70!16.87!PAWR;;chr2:46602901..46602926,+!p7@EPAS1!0.70!5.68!EPAS1;;chr2:46602879..46602899,+!p8@EPAS1!0.69!4.89!EPAS1;;chr8:72756637..72756664,-!p3@MSC!0.69!4.57!MSC;;chr6:126240463..126240489,+!p6@NCOA7!0.69!4.42!NCOA7;;chr12:80084303..80084332,-!p1@PAWR!0.68!25.23!PAWR;;chr12:53625966..53626012,-!p2@RARG!0.68!11.04!RARG;;chr5:158526917..158526932,-!p1@EBF1!0.68!10.41!EBF1;;chr6:144289132..144289134,-!p3@PLAGL1!0.68!9.78!PLAGL1;;chr10:63809077..63809089,+!p5@ARID5B!0.68!8.99!ARID5B;;chr1:170632137..170632172,+!p10@PRRX1!0.68!3.78!PRRX1;;chr17:46126136..46126152,+!p1@NFE2L1!0.67!217.79!NFE2L1;;chr3:178789522..178789564,-!p2@ZMAT3!0.67!31.38!ZMAT3;;chr12:104531785..104531812,-!p3@NFYB!0.67!10.57!NFYB;;chr8:72756023..72756055,-!p6@MSC!0.67!4.73!MSC;;chr6:50789737..50789746,+!p10@TFAP2B!0.67!3.63!TFAP2B;;chr8:93074848..93074871,-!p3@RUNX1T1!0.67!3.63!RUNX1T1;;chr1:23885981..23886002,-!p1@ID3!0.66!735.84!ID3;;chr7:28220198..28220269,-!p2@JAZF1!0.66!36.59!JAZF1;;chr5:43067636..43067674,+!p6@ZNF131!0.66!5.05!ZNF131;;chr11:44331679..44331702,-!p2@ALX4!0.65!3.47!ALX4;;chr10:114710244..114710257,+!p3@TCF7L2!0.64!10.41!TCF7L2;;chrX:56258844..56258882,+!p1@KLF8!0.63!4.73!KLF8;;chr1:170632762..170632786,+!p13@PRRX1!0.63!3.31!PRRX1;;chr14:95236551..95236576,-!p2@GSC!0.63!3.31!GSC;;chr3:141121871..141121885,+!p13@ZBTB38!0.63!3.31!ZBTB38;;chr12:115122005..115122016,-!p3@TBX3!0.62!3.94!TBX3;;chr10:28035133..28035148,-!p3@MKX!0.62!3.15!MKX;;chr15:57511589..57511608,+!p4@TCF12!0.62!3.15!TCF12;;chr15:96869165..96869183,+!p20@NR2F2!0.62!3.15!NR2F2;;chr6:10415484..10415508,-!p3@TFAP2A!0.62!3.15!TFAP2A;;chr7:1577076..1577095,+!p5@MAFK!0.62!3.15!MAFK;;chr3:37217736..37217753,-!p2@LRRFIP2!0.61!15.14!LRRFIP2;;chr6:126102292..126102329,+!p3@NCOA7!0.61!11.83!NCOA7;;chr15:96873921..96873946,+!p1@NR2F2!0.60!102.19!NR2F2;;chr8:49833978..49833996,-!p1@SNAI2!0.60!75.22!SNAI2;;chr6:126240356..126240379,+!p7@NCOA7!0.60!3.78!NCOA7;;chr1:170632647..170632659,+!p17@PRRX1!0.60!3.00!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.60!3.00!PRRX1;;chr15:96869206..96869220,+!p21@NR2F2!0.60!3.00!NR2F2;;chr2:85360499..85360598,+!p1@TCF7L1!0.59!19.40!TCF7L1;;chr6:35464817..35464894,-!p1@TEAD3!0.58!52.36!TEAD3;;chr14:73360799..73360817,-!p1@DPF3!0.58!11.51!DPF3;;chr17:1959369..1959388,+!p2@HIC1!0.58!8.67!HIC1;;chr15:96874216..96874236,+!p13@NR2F2!0.58!4.73!NR2F2;;chr2:45236540..45236577,-!p1@SIX2!0.58!2.84!SIX2;;chr1:119530493..119530572,-!p1@TBX15!0.58!2.84!TBX15;;chr2:85981222..85981259,+!p2@ATOH8!0.57!4.89!ATOH8;;chr10:63809090..63809097,+!p7@ARID5B!0.57!4.10!ARID5B;;chr11:46299443..46299459,+!p4@CREB3L1!0.57!2.68!CREB3L1;;chr14:37132241..37132304,+!p3@PAX9!0.57!2.68!PAX9;;chr16:86600870..86600921,+!p2@FOXC2!0.57!2.68!FOXC2;;chr6:1389989..1390019,+!p2@FOXF2!0.57!2.68!FOXF2;;chr8:93115584..93115642,-!p5@RUNX1T1!0.57!2.68!RUNX1T1;;chr1:170632439..170632465,+!p11@PRRX1!0.57!2.68!PRRX1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.56!28.86!PPP1R13L;;chr1:25256756..25256774,-!p1@RUNX3!0.56!5.52!RUNX3;;chr9:4299552..4299598,-!p5@GLIS3!0.56!5.05!GLIS3;;chr19:33865009..33865090,+!p3@CEBPG!0.56!3.78!CEBPG;;chr6:45390025..45390076,+!p2@RUNX2!0.55!7.10!RUNX2;;chr9:102584262..102584276,+!p1@NR4A3!0.55!6.62!NR4A3;;chr16:67881588..67881612,-!p2@CENPT!0.55!3.78!CENPT;;chr8:72756213..72756243,-!p5@MSC!0.55!3.47!MSC;;chr8:116673894..116673913,-!p12@TRPS1!0.55!2.52!TRPS1;;chr20:55205791..55205817,+!p3@TFAP2C!0.55!2.52!TFAP2C;;chr12:115121802..115121814,-!p5@TBX3!0.55!2.52!TBX3;;chr10:114709999..114710031,+!p1@TCF7L2!0.54!74.44!TCF7L2;;chr14:62162258..62162269,+!p2@HIF1A!0.54!30.28!HIF1A;;chr12:80084167..80084197,-!p5@PAWR!0.54!6.78!PAWR;;chr8:72756267..72756296,-!p4@MSC!0.54!3.94!MSC;;chr1:244219775..244219893,+!p2@ZNF238!0.54!3.63!ZNF238;;chr8:116681194..116681214,-!p1@TRPS1!0.53!28.23!TRPS1;;chr5:137804484..137804498,+!p2@EGR1!0.53!11.83!EGR1;;chr12:104531854..104531893,-!p2@NFYB!0.53!10.72!NFYB;;chr14:89628064..89628109,-!p4@FOXN3!0.53!5.68!FOXN3;;chr10:63808979..63808990,+!p8@ARID5B!0.53!2.68!ARID5B;;chr19:45971246..45971265,+!p1@FOSB!0.52!56.30!FOSB;;chr17:56065729..56065781,-!p2@VEZF1!0.52!12.62!VEZF1;;chr15:96874244..96874259,+!p5@NR2F2!0.52!6.62!NR2F2;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.52!4.42!MEIS3P1;;chr6:144329384..144329405,-!p1@PLAGL1!0.51!34.06!PLAGL1;;chr3:69788576..69788648,+!p1@MITF!0.51!15.30!MITF;;chr5:72744594..72744609,-!p1@FOXD1!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581!0.17!0.47!ZNF580;;chr19:56146455..56146471,+!p19@ZNF580,p7@ZNF581!0.17!0.47!ZNF580;;chr1:158985686..158985719,+!p15@IFI16!0.17!0.47!IFI16;;chr1:164528942..164528964,+!p11@PBX1!0.17!0.47!PBX1;;chr1:170633021..170633028,+!p27@PRRX1!0.17!0.47!PRRX1;;chr1:2234717..2234744,+!p4@SKI!0.17!0.47!SKI;;chr1:244219392..244219409,+!p5@ZNF238!0.17!0.47!ZNF238;;chr1:25256439..25256476,-!p3@RUNX3!0.17!0.47!RUNX3;;chr1:8586084..8586100,-!p20@RERE!0.17!0.47!RERE;;chr20:61493191..61493209,-!p2@TCFL5!0.17!0.47!TCFL5;;chr21:36260325..36260341,-!p14@RUNX1!0.17!0.47!RUNX1;;chr9:4299638..4299651,-!p8@GLIS3!0.17!0.47!GLIS3;;chrX:56258885..56258896,+!p5@KLF8!0.17!0.47!KLF8;;chrX:24167086..24167111,+!p4@ZFX!0.17!0.47!ZFX;;chr9:130953000..130953012,-!p10@CIZ1!0.17!0.47!CIZ1;;chrX:30327504..30327509,-!p1@NR0B1!0.17!0.47!NR0B1;;chr9:16727880..16727894,-!p10@BNC2!0.17!0.47!BNC2;;chrY:21906623..21906637,-!p3@KDM5D!0.17!0.47!KDM5D;;chr10:64133910..64133925,+!p5@ZNF365!0.17!0.47!ZNF365;;chr11:44331735..44331747,-!p3@ALX4!0.17!0.47!ALX4;;chr11:45202609..45202623,+!p@chr11:45202609..45202623,+!0.17!0.47!PRDM11;;chr11:65480222..65480241,+!p4@KAT5!0.17!0.47!KAT5;;chr12:51611583..51611612,-!p4@POU6F1!0.17!0.47!POU6F1;;chr12:57853634..57853662,+!p2@GLI1!0.17!0.47!GLI1;;chr13:45151548..45151569,-!p9@TSC22D1!0.17!0.47!TSC22D1;;chr14:21572366..21572375,-!p16@ZNF219!0.17!0.47!ZNF219;;chr14:33408493..33408525,+!p4@NPAS3!0.17!0.47!NPAS3;;chr14:37131404..37131412,+!p15@PAX9!0.17!0.47!PAX9;;chr14:45722673..45722691,-!p8@MIS18BP1!0.17!0.47!MIS18BP1;;chr14:61190754..61190776,-!p6@SIX4!0.17!0.47!SIX4;;chr14:65568389..65568408,-!p4@MAX!0.17!0.47!MAX;;chr5:142780237..142780261,-!p7@NR3C1!0.17!0.47!NR3C1;;chr6:10412640..10412655,-!p14@TFAP2A!0.17!0.47!TFAP2A;;chr6:106535598..106535637,+!p7@PRDM1!0.17!0.47!PRDM1;;chr6:108977520..108977534,+!p7@FOXO3!0.17!0.47!FOXO3;;chr6:126240542..126240553,+!p14@NCOA7!0.17!0.47!NCOA7;;chr6:45389985..45389996,+!p18@RUNX2!0.17!0.47!RUNX2;;chr6:50786414..50786426,+!p7@TFAP2B!0.17!0.47!TFAP2B;;chr6:50786529..50786540,+!p8@TFAP2B!0.17!0.47!TFAP2B;;chr7:137564648..137564658,-!p32@CREB3L2!0.17!0.47!CREB3L2;;chr7:139762578..139762589,-!p2@PARP12!0.17!0.47!PARP12;;chr7:150945663..150945692,-!p5@SMARCD3!0.17!0.47!SMARCD3;;chr8:123794038..123794056,+!p5@ZHX2!0.17!0.47!ZHX2;;chr8:72756251..72756262,-!p12@MSC!0.17!0.47!MSC;;chr8:72756522..72756533,-!p13@MSC!0.17!0.47!MSC;;chr9:100615546..100615558,+!p4@FOXE1!0.17!0.47!FOXE1;;chr9:100616439..100616476,+!p3@FOXE1!0.17!0.47!FOXE1;;chr22:41721853..41721874,+!p6@ZC3H7B!0.17!0.47!ZC3H7B;;chr2:113033499..113033511,+!p8@ZC3H6!0.17!0.47!ZC3H6;;chr2:172967266..172967271,-!p6@DLX2!0.17!0.47!DLX2;;chr2:19558327..19558334,-!p2@OSR1!0.17!0.47!OSR1;;chr2:28616301..28616302,+!p9@FOSL2!0.17!0.47!FOSL2;;chr2:95825586..95825609,-!p4@ZNF514!0.17!0.47!ZNF514;;chr3:128207327..128207348,-!p8@GATA2!0.17!0.47!GATA2;;chr3:25469815..25469866,+!p3@RARB!0.17!0.47!RARB;;chr3:44596664..44596672,+!p2@ZNF167!0.17!0.47!ZNF167;;chr3:71102834..71102851,-!p45@FOXP1!0.17!0.47!FOXP1;;chr4:299227..299272,-!p1@ZNF732!0.17!0.47!ZNF732;;chr3:52008016..52008071,-!p1@ABHD14A-ACY1,p1@ABHD14B,p1@PCBP4!0.16!74.75!PCBP4;;chr10:31608127..31608156,+!p1@ZEB1!0.16!23.50!ZEB1;;chr18:32870260..32870293,+!p1@ZNF271!0.16!16.09!ZNF271;;chr2:231191875..231191918,+!p1@SP140L!0.16!11.99!SP140L;;chr2:145274900..145274934,-!p4@ZEB2!0.16!7.25!ZEB2;;chr11:65686952..65686975,+!p5@DRAP1!0.16!6.47!DRAP1;;chr10:43133950..43133994,-!p2@ZNF33B!0.16!3.94!ZNF33B;;chr3:114866084..114866118,-!p2@ZBTB20!0.16!3.94!ZBTB20;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000710;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002077;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002167
 |ffid_belonging_in_development=CL:0000133,CL:0000221
 |fonse_cell_line=

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FF:11935-125I9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 15:51, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0